Metagenome / Metatranscriptome Family F081345

Basic Information
Family ID	F081345
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	50 residues
Representative Sequence	YFEIDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Number of Associated Samples	104
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	8.77 %
% of genes from short scaffolds (< 2000 bps)	1.75 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (89.474 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (57.895 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (51.754 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.29% β-sheet: 0.00% Coil/Unstructured: 95.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF07068	Gp23	0.88
PF13385	Laminin_G_3	0.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
All Organisms	root	All Organisms	10.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
Viruses	superkingdom	All Organisms → Viruses	9.65 %
cellular organisms	root	All Organisms → cellular organisms	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.47 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.75 %
Psychroflexus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Psychroflexus	0.88 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000882\|FwDRAFT_10071224	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Psychroflexus	3331	Open in IMG/M
3300001826\|ACM20_101802	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5434	Open in IMG/M
3300005662\|Ga0078894_10095958	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2610	Open in IMG/M
3300006484\|Ga0070744_10002612	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5429	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10103854	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300020084\|Ga0194110_10097441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2443	Open in IMG/M
3300020161\|Ga0211726_10284653	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2401	Open in IMG/M
3300020162\|Ga0211735_10585707	All Organisms → Viruses → Predicted Viral	1572	Open in IMG/M
3300021091\|Ga0194133_10096624	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2283	Open in IMG/M
3300024865\|Ga0256340_1115360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	651	Open in IMG/M
3300025070\|Ga0208667_1002707	All Organisms → Viruses	5612	Open in IMG/M
3300034104\|Ga0335031_0075156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2407	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.93%
Marine	Environmental → Aquatic → Marine	28.07%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	36.84%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.91%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.26%
River	Environmental → Aquatic → Freshwater → River	3.51%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.51%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.75%
Coastal	Environmental → Aquatic → Marine → Coastal	1.75%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.75%
Inlet	Environmental → Aquatic → Marine → Inlet	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.84%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	20.18%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.02%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.14%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.26%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.39%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.04%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.02%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.14%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.14%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.39%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.39%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.39%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.51%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.75%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.75%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.75%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.88%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.88%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.88%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.88%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.88%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.88%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.88%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.88%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000425	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001826	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM20, ROCA_DNA104_0.2um_23b	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020553	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024358	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8d	Environmental	Open in IMG/M
3300024503	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h	Environmental	Open in IMG/M
3300024865	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025666	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300027144	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0h	Environmental	Open in IMG/M
3300027305	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
P_2C_Liq_2_UnCtyDRAFT_10554752	3300000425	Enviromental	FEVDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI*
FwDRAFT_100712245	3300000882	Freshwater And Marine	FEIDNVTEDFLIGGQTGNTFSLICSTFMTRRSSIQTEMRTI*
B570J14230_100838632	3300001282	Freshwater	GYFEIDNVREEQLIGGRVDEKFSIICSTFMTRRSSIQTEMRVI*
ACM20_1018025	3300001826	Marine Plankton	DNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI*
B570J29032_1093332612	3300002408	Freshwater	IIFHNNGYFEIDNVREDQLVGGQVDNKFSIICSTFMTRRSTIQTEMRIV*
B570J40625_1006315001	3300002835	Freshwater	GYFEIDNVTEEQLIGGRTDEKFSIICSTFMTRRSSIQTEMRIV*
JGI25910J50241_101130961	3300003388	Freshwater Lake	FRFNRFTLEDTGFYPEVGDIVFHNNGYFEIDNVKEDQLVGGQVGNNFSIICSTFMTRRSSIQTEMRVI*
JGI25922J50271_100929832	3300003413	Freshwater Lake	EVGDIIFHNNGYFEIDNVSEDQLIGGRVETGDGEAFSIICSTFMTRRSSIQTEMRIL*
JGI25921J50272_100707372	3300003430	Freshwater Lake	PEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRVV*
JGI25919J51413_10145051	3300003488	Freshwater Lake	YPEIGDLIFHNEAYFEIDNVNEDQLIGGRTGDEEHFSIVCFTFMSRRSTIQTEMRVV*
JGI26260J51721_10717481	3300003580	Marine	IDNVREDQLIGGQSGEKFSLIVSTFMTRRSTIQTEERVI*
Ga0066177_101900282	3300004096	Freshwater Lake	DSSQTVQFRFNRFTLEDKGFYPEVGDIIFHNEAYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRII*
Ga0065166_103956092	3300004112	Freshwater Lake	GDIIFHNEAYFEIDNVTEDQLIGGRVETGDGEKFSIICSTFMTRRSAIQTEMRIV*
Ga0049083_102707291	3300005580	Freshwater Lentic	EDQLIGGRTGDEEHFSIVCFTFMSRRSTIQTEMRVV*
Ga0049080_102670991	3300005582	Freshwater Lentic	NNGYFEIDNVKEDQLVGGQVGNNFSIICSTFMTRRSSIQTEMRVI*
Ga0049082_101275561	3300005584	Freshwater Lentic	HNDAYFEIDNVNEDQLIGGRTGDEEHFSIVCFTFMSRRSTIQTEMRVV*
Ga0049084_100571291	3300005585	Freshwater Lentic	GYFEIDNVKEEQLIGGRVDEKFSIICSTFMSRRSTIQTEMRVV*
Ga0078894_100959581	3300005662	Freshwater Lake	KETGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGDGEAFSIICSTFMTRRSSIQTEMRVL*
Ga0078894_104030022	3300005662	Freshwater Lake	NIREDQLIGGRTDDTENFSIICSAFMTRRSTIQTEERVII*
Ga0078894_104983211	3300005662	Freshwater Lake	NFYPEVGDIIYHNDAYFEIDNVTEDQLIGGRPGEKFSIICSTFMSRRTTLQTEERVS*
Ga0078894_112568152	3300005662	Freshwater Lake	EIDNVREDQLIAGQESHKFSIICSTFMSRKTTIQTEPRSI*
Ga0070744_100026125	3300006484	Estuarine	GYFEIDNVREDQLVGGQVGNNFSIICSTFMTRRSSIQTEMRVI*
Ga0098048_11760271	3300006752	Marine	REDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI*
Ga0102874_10299704	3300007546	Estuarine	RFNRFTLKDTGFYPEVGDIIFHNDGYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRIV*
Ga0102879_10423443	3300007549	Estuarine	VQFRFNRFTLKDTGFYPEVGDIIFHNEAYFEIDNVTEDFLIGGRAGEEERFSLICSTFMTRRSSIQTEMRIV*
Ga0102896_11832501	3300007618	Estuarine	TGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGDGEAFSIICSTFMTRRISIQTEMRVL*
Ga0114344_10033661	3300008111	Freshwater, Plankton	DNIRVDQLMVGQVDNKFSIICSTFMSRRSNIQTEMRTV*
Ga0114347_10951231	3300008114	Freshwater, Plankton	RFTLKETGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGDGEAFSIICSTFMTRRSSIQTEMRVL*
Ga0114350_10653602	3300008116	Freshwater, Plankton	EAYFEIDNVREDQLIAGRVESGDGQNFSVICSTFMTRRSAIQTEMRII*
Ga0114336_12548731	3300008261	Freshwater, Plankton	QFRFNRFTLKETGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGDGEAFSIICSTFMTRRSSIQTEMRVL*
Ga0114336_12966491	3300008261	Freshwater, Plankton	VREDQLIGGQVQNKFSIICSTFMTRRSTIQTEMRIL*
Ga0114337_10596383	3300008262	Freshwater, Plankton	LEDTGFYPEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRVV*
Ga0114337_11805892	3300008262	Freshwater, Plankton	EKGFYPEVGDIIFHNEAYFEIDNVTEDQLVGGRVESGEGEKFSIICSTFMTRRSSIQTEMRNV*
Ga0114363_11756171	3300008266	Freshwater, Plankton	VTEDFLVGGRVGEDENFSIICSTFMSRRSSIQTEMRVV*
Ga0114364_10898771	3300008267	Freshwater, Plankton	GDIIFHNDGYFEIDNVTEDFLIGGRTGEEERFSLICSTFMTRRSSIQTEMRIV*
Ga0102831_12223751	3300008996	Estuarine	IIFHNEAYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRII*
Ga0114981_101709131	3300009160	Freshwater Lake	YFEIDNVNEDQLIGGRTGDEEHFSITCSTFMSRRSTIQTEMRVV*
Ga0114964_104121081	3300010157	Freshwater Lake	VREDQLVAGQESHKFSILCSAFMSRRTSIQTEPRTI*
Ga0129342_13153572	3300010299	Freshwater To Marine Saline Gradient	DNVREDQLIAGRPDEKFSIICSTFMTRRSSIQTEERVV*
Ga0102883_11328621	3300010312	Estuarine	IFHNNGYFEIDNVTEDQLIGGRVETGDGEVFSIICSTFMTRRSSIQTEMRTI*
Ga0157210_10354292	3300012665	Freshwater	HNNGYFEIDNVTEDQLIGGRVETGDGEKFSIICSTFMTRRSSIQTEMRVI*
(restricted) Ga0172376_101038541	3300014720	Freshwater	ILLKEKDFYPEIGDIIYHNDAYFEIDNVREDQLVAGRVESGDGQNFSIICSTFMTRRSAIQTEMKII*
Ga0181357_13204251	3300017777	Freshwater Lake	VNEDQLIGGRTGDEEHFSIVCFTFMSRRSTIQTEMRVV
Ga0169931_104205892	3300017788	Freshwater	YFEIDNVREEMLIGGRVETGSGEKFSIICSTFMTRRSNIQTEMRIV
Ga0181580_109826491	3300017956	Salt Marsh	FEIDNVREDQLIGGQSGEKFSIIVSTYMTRRSTIQTEERVL
Ga0181585_106511892	3300017969	Salt Marsh	HNDAYFEIDNVREDQLIGGQSREKFSIICSTFMTRTSSIQTEMRVI
Ga0181569_102064831	3300017986	Salt Marsh	IDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0181572_102268312	3300018049	Salt Marsh	AYFEIDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0181591_102427723	3300018424	Salt Marsh	YFEIDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0194110_100974415	3300020084	Freshwater Lake	VGDIIFHNQGYFEIDNVREDQMVGGQVDSKFAIICSTFMSRRSSIQTEMRVI
Ga0211734_110465912	3300020159	Freshwater	DNVREDQLIGGRTGEQEHFSIICSAFMSRKTSIQTEMRVV
Ga0211733_108111832	3300020160	Freshwater	TYEGFGADTNQTVQFRFNRFTLKDKDFYPEVGDVIFHNDAYFEIDNVREDQLIGGRTGEQEHFSIICSTFMSRRTTIQTEDRVL
Ga0211726_102846531	3300020161	Freshwater	NVREDQLIAGRVESGDGQNFSVICSTFMTRRSAIQTEMRVI
Ga0211726_107056751	3300020161	Freshwater	NDGYFEIDNVSEDQLIGGRTGDQEHFSLICSTFMSRRSSIQTEMRIV
Ga0211735_105857073	3300020162	Freshwater	RFNRFSLKDTGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGSGEAFSIICSTFMSRRSSIQTEMRVV
Ga0211729_113520305	3300020172	Freshwater	SGFYPEVGDIIFHNDGYFEIDNVSEDQLIGGRTGDQEHFSLICSTFMSRRSSIQTEMRIV
Ga0194134_100382785	3300020179	Freshwater Lake	GFYPEVGDIIFHNQGYFEIDNVREDQMVGGQVDSKFAIICSTFMSRRSSIQTEMRVI
Ga0194128_100779351	3300020197	Freshwater Lake	FHNQGYFEIDNVREDQMVGGQVDSKFAIICSTFMSRRSSIQTEMRVI
Ga0211731_115641031	3300020205	Freshwater	DKGFYPEVGDIIFHNEAYFEIDNVIEDFLIGGRTETGDGEKFSIICSTFMTRRSSIQTEMRTI
Ga0211505_11630052	3300020352	Marine	HNDAYFEIDNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0207941_10236141	3300020539	Freshwater	IDNVREDQLIGGQTGEKFSIICSTFMTRRSSIQTEMRDI
Ga0208855_10203142	3300020553	Freshwater	YPEIGDLIFHNNAYYEIDNVREDQFIAGQESHKFSIICSTFMSRKSTIQTEPRTI
Ga0208597_10345642	3300020562	Freshwater	GFYPEVGDIIFHNDAYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRIV
Ga0194133_100966245	3300021091	Freshwater Lake	HNEGYFEIDNVREDQMVGGQVDSKFAIICSTFMSRRSSIQTEMRVI
Ga0214163_10542981	3300021141	Freshwater	NRFTLAETGFYPEVGDIIFHNDAYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRIV
Ga0194117_100604755	3300021424	Freshwater Lake	PHNEGYFEIDNVREDQMVGGQVDSKFAIICSTFMSRRSSIQTEMRVI
Ga0222716_102377982	3300021959	Estuarine Water	FEIDNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0222714_106582561	3300021961	Estuarine Water	GFYPEVGDIIFHNEAYFEIDNVTEDFLIGGRVESGDGEKFSIICSTFMTRRSAIQTEMRV
Ga0222719_107581842	3300021964	Estuarine Water	ESDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0196901_12806771	3300022200	Aqueous	GDLIYHNDAYFEIDSVREDQLIGGRVDEKFSIICSTFMTRRSSIQTEERIV
Ga0181351_10735823	3300022407	Freshwater Lake	KIDNVKEDQLVGGQVGNNFSIICSTFMTRRSSIQTEMRVI
Ga0255781_104216642	3300022934	Salt Marsh	FEIDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0255772_103863082	3300023176	Salt Marsh	VREDQLIGGQSGEKFSIICSTFMTRRSTIQTEMRVI
(restricted) Ga0233444_102372411	3300024264	Seawater	DNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0244776_104039622	3300024348	Estuarine	QRLEILMHNDAYFEIDNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0244776_107490201	3300024348	Estuarine	IFHNDAYFEIDNVTEDFLIGGRTGEEEHFSLICSTFMTRRSSIQTEMRIV
Ga0255173_10340382	3300024358	Freshwater	DIIYHNDGYFEISNTREDMLIGGRVGEDEKYSVICSTFMTRRSSIQTEMRVL
Ga0255152_10022611	3300024503	Freshwater	KDFYPEIGDIIYHNDAYFEISNVREDFLIGGRVETGDGEKFSVICQTFMTRRSSIQTEMRVI
Ga0256340_11153601	3300024865	Freshwater	REDFLIGGRVETGDGEKFSVICQTFMTRRSSIQTEMRVI
Ga0208667_10027074	3300025070	Marine	VREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0209601_10153201	3300025666	Pelagic Marine	DAYFEIDNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0209771_11973811	3300025701	Marine	MHNDAYFEIDNVREDQLIGGQSGEKFSIICSTFMTRRSSIQTEMRVI
Ga0209305_10161261	3300025712	Pelagic Marine	MHNDAYFEIDNVREDQLIGGQSGEKFSIIASTFMTRRSSIQTEMRVI
Ga0255102_10383222	3300027144	Freshwater	TLEDTGFYPEVGDIVFHNNGYFEIDNVKEDQLVGGQVGNNFSIICSTFMTRRSSIQTEMRVI
Ga0208168_10900832	3300027305	Estuarine	SQNAQFRFNRFTLKETGFYPEVGDIIFHNNGYFEIDNVTEDQLIGGRVETGDGEAFSIICSTFMTRRSSIQTEMRIV
Ga0208975_12141761	3300027659	Freshwater Lentic	RITLEDTGFYPEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRIV
Ga0209770_102597222	3300027769	Freshwater Lake	LKEKDFYPEIGDIIFHNSAYFEIDNVTEDFLVGGRVGEDENFSIICSTFMSRRSSIQTEMRVV
Ga0209353_100373425	3300027798	Freshwater Lake	NEDQLIGGRTGDEEHFSIVCFTFMSRRSTIQTEMRVV
Ga0209358_103293702	3300027804	Freshwater Lake	VREDQLIGGQVDNKFSIICSTFMSRRSNIQTEMRTV
Ga0209354_101316422	3300027808	Freshwater Lake	YFEIDNVIEDQLIGGRTGDEEHFSIVCSTFMTRKSTIQTEMRII
Ga0315900_106341071	3300031787	Freshwater	DSSQLVEFRFNRFTLEDKGFYPEVGDIIFHNNGYFEIDNVREEQLIGGRVDEKFSIVCSTFMSRRSSIQTEMRVV
Ga0315909_102540221	3300031857	Freshwater	EVGDIIFHNEAYFEIDNVTEDQLIGGRVESGAGEKFSVICSTFMTRRSSIQTEMRVI
Ga0315909_105517591	3300031857	Freshwater	VREDQLVGGQVDNKFSIICSTFMTRRSTIQTEMRIV
Ga0315904_108468891	3300031951	Freshwater	HNNGYFEIDNVREDQMVGGQVDNKFSIICSTFMTRRSTIQTEMRIV
Ga0310344_110232852	3300032006	Seawater	EIGDIVFHNEAYFEISNVREDQLIGGRSGEKFSIIVSTFMTRRSQLNLESRIV
Ga0315906_113622061	3300032050	Freshwater	IFHNDGYFEIDNVTEDFLVGGRVGEDERFSVICSTFMTRRSNIQTEMRVI
Ga0315902_106854042	3300032093	Freshwater	GFYPEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRI
Ga0334980_0297357_393_590	3300033816	Freshwater	LEDTGFYPEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRVV
Ga0334992_0338373_1_108	3300033992	Freshwater	REEQLIGGRVDEKFSIICSTFMSRRSTIQTEERTI
Ga0334994_0372076_3_152	3300033993	Freshwater	IIFHNDGYFEIDNVREEQLIGGRVDEKFSIICSTFMTRRSSIQTEMRIV
Ga0334994_0513649_397_552	3300033993	Freshwater	GDIIFHNNGYFEIDNVREEQLIGGRVDEKFSIICSTFMTRRSTIQTEMRVV
Ga0334979_0614493_400_576	3300033996	Freshwater	PEIGDIIFHNDAYFEIDNVIEDFLIGGRVESGDGEKFSIICSTFMTRKSTIQTEMRIV
Ga0335020_0199805_3_137	3300034082	Freshwater	NGYFEIDNVREDQLIGGQVNNKFSIICSTFMTRRSTIQTEMRIV
Ga0335010_0376625_3_116	3300034092	Freshwater	NIREDQLIGGQVNNKWSIICSTFMTRRSTIQTEMRIV
Ga0335012_0235522_845_955	3300034093	Freshwater	VREEQLIGGRVDEKFSIICSTFMTRRSSIQTEMRIV
Ga0335029_0348637_52_249	3300034102	Freshwater	LEDTGFYPEVGDIIFHNNGYFEIDNVREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRIV
Ga0335031_0075156_2180_2407	3300034104	Freshwater	DKNQLVEFRFNRFTLEDTGFYPEVGDIIFHNNGYFEIDNVREDQLVGGQVDNKFSIICSTFMTRRSTIQTEMRIV
Ga0335050_0090507_1_201	3300034108	Freshwater	TLEDKGFYPEIGDIIFHNDAYFEIDNVIEDFLIGGRVESGDGEKFSIICSTFMTRKSTIQTEMRIV
Ga0335050_0476784_420_539	3300034108	Freshwater	IDNVTEEQLIGGRTDEKFSIICSTFMTRRSSIQTEMRIV
Ga0335063_0505188_2_145	3300034111	Freshwater	FHNNAYFEIDNIREDQLIGGQVNNKWSIICSTFMTRRSTIQTEMRIV
Ga0335056_0603659_1_141	3300034120	Freshwater	HNNGYFEVDNVTEEQLIGGRVDEKFSIICSTFMTRRSSIQTEMRVV
Ga0335065_0459592_2_130	3300034200	Freshwater	YFEIDNVREDQLVGGQVDNKFSIICSTFMTRRSTIQTEMRVV
Ga0335052_0635998_2_193	3300034279	Freshwater	DTGFYPEVGDIIFHNEAYFEVDNVMEDQLIGGRVDTGDGEKFSIICSTFMTRRSSIQTEMRIV
Ga0335007_0565853_2_124	3300034283	Freshwater	VREDQLIGGRVETGNGEAFSIICSTFMTRRSSIQTEMRIV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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