Metagenome / Metatranscriptome Family F081383

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081383
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	76 residues
Representative Sequence	QTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM
Number of Associated Samples	47
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.18 %
% of genes near scaffold ends (potentially truncated)	78.07 %
% of genes from short scaffolds (< 2000 bps)	78.07 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.018 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat (73.684 % of family members)
Environment Ontology (ENVO)	Unclassified (97.368 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (74.561 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.92% β-sheet: 0.00% Coil/Unstructured: 81.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13585	CHU_C	5.26
PF07228	SpoIIE	2.63
PF01433	Peptidase_M1	2.63
PF13421	Band_7_1	1.75
PF02384	N6_Mtase	1.75
PF07661	MORN_2	1.75
PF01712	dNK	1.75
PF07676	PD40	1.75
PF07690	MFS_1	1.75
PF01476	LysM	1.75
PF00425	Chorismate_bind	0.88
PF00501	AMP-binding	0.88
PF00196	GerE	0.88
PF00730	HhH-GPD	0.88
PF01106	NifU	0.88
PF06245	DUF1015	0.88
PF00696	AA_kinase	0.88
PF02910	Succ_DH_flav_C	0.88
PF02481	DNA_processg_A	0.88
PF05746	DALR_1	0.88
PF00392	GntR	0.88
PF04342	DMT_6	0.88
PF07584	BatA	0.88
PF16360	GTP-bdg_M	0.88
PF14511	RE_EcoO109I	0.88
PF00593	TonB_dep_Rec	0.88
PF02355	SecD_SecF	0.88
PF00691	OmpA	0.88
PF07479	NAD_Gly3P_dh_C	0.88
PF13520	AA_permease_2	0.88
PF04012	PspA_IM30	0.88
PF01016	Ribosomal_L27	0.88
PF13932	GIDA_C	0.88
PF07726	AAA_3	0.88
PF02913	FAD-oxidase_C	0.88
PF14127	DUF4294	0.88
PF00561	Abhydrolase_1	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	2.63
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.75
COG1428	Deoxyadenosine/deoxycytidine kinase	Nucleotide transport and metabolism [F]	1.75
COG1842	Phage shock protein A	Transcription [K]	1.75
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	1.75
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.88
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.88
COG0211	Ribosomal protein L27	Translation, ribosomal structure and biogenesis [J]	0.88
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.88
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.88
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.88
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.88
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.88
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.88
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	0.88
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	40.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	37.72 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	21.05 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.75 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	1.75 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	21.05 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.75 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.75 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	21.05 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.75 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.75 %
Candidatus Thermochlorobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Candidatus Thermochlorobacteriaceae	0.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	21.05 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.75 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.75 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.88 %
Candidatus Thermochlorobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Candidatus Thermochlorobacteriaceae → Candidatus Thermochlorobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	21.05 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.75 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.75 %
Candidatus Thermochlorobacter aerophilum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Candidatus Thermochlorobacteriaceae → Candidatus Thermochlorobacter → Candidatus Thermochlorobacter aerophilum	0.88 %
Flavobacterium urocaniciphilum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium urocaniciphilum	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002510\|JGI24186J35511_1050693	Not Available	559	Open in IMG/M
3300003688\|Ga0061020_1097368	Not Available	596	Open in IMG/M
3300005244\|Ga0068644_1009972	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005251\|Ga0068634_1197276	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1518	Open in IMG/M
3300005411\|Ga0068647_1119678	Not Available	503	Open in IMG/M
3300005414\|Ga0068646_1133603	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	674	Open in IMG/M
3300005452\|Ga0068706_1016711	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1723	Open in IMG/M
3300005452\|Ga0068706_1046352	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005452\|Ga0068706_1059219	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005452\|Ga0068706_1067733	Not Available	633	Open in IMG/M
3300005452\|Ga0068706_1069036	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	625	Open in IMG/M
3300005452\|Ga0068706_1096910	Not Available	515	Open in IMG/M
3300005452\|Ga0068706_1099264	Not Available	509	Open in IMG/M
3300005453\|Ga0068705_10000560	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	18779	Open in IMG/M
3300005453\|Ga0068705_10001671	All Organisms → cellular organisms → Bacteria	11136	Open in IMG/M
3300005453\|Ga0068705_10099771	Not Available	780	Open in IMG/M
3300005453\|Ga0068705_10155314	Not Available	566	Open in IMG/M
3300005453\|Ga0068705_10170102	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	533	Open in IMG/M
3300005858\|Ga0079995_1063250	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	8748	Open in IMG/M
3300006380\|Ga0068664_1035400	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	828	Open in IMG/M
3300006848\|Ga0101768_1079548	Not Available	589	Open in IMG/M
3300006849\|Ga0102029_1053352	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010181\|Ga0124926_1015147	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1945	Open in IMG/M
3300010181\|Ga0124926_1103660	Not Available	750	Open in IMG/M
3300010190\|Ga0124925_1040129	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	574	Open in IMG/M
3300010194\|Ga0124921_1156145	Not Available	563	Open in IMG/M
3300026509\|Ga0209809_1014033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3492	Open in IMG/M
3300028761\|Ga0272447_1005009	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5298	Open in IMG/M
3300028761\|Ga0272447_1026075	Not Available	1119	Open in IMG/M
3300031245\|Ga0308395_1001581	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14492	Open in IMG/M
3300031245\|Ga0308395_1008211	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4378	Open in IMG/M
3300031245\|Ga0308395_1008787	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4163	Open in IMG/M
3300031245\|Ga0308395_1009986	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3789	Open in IMG/M
3300031245\|Ga0308395_1036696	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1391	Open in IMG/M
3300031245\|Ga0308395_1056373	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1006	Open in IMG/M
3300031245\|Ga0308395_1149450	Not Available	501	Open in IMG/M
3300031508\|Ga0308394_1011125	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300031508\|Ga0308394_1012113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2812	Open in IMG/M
3300031508\|Ga0308394_1028967	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300031508\|Ga0308394_1040124	Not Available	1159	Open in IMG/M
3300031508\|Ga0308394_1086617	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium urocaniciphilum	654	Open in IMG/M
3300031508\|Ga0308394_1095427	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	610	Open in IMG/M
3300031508\|Ga0308394_1105276	Not Available	570	Open in IMG/M
3300031508\|Ga0308394_1109628	Not Available	554	Open in IMG/M
3300031509\|Ga0308399_1005046	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3972	Open in IMG/M
3300031509\|Ga0308399_1005992	Not Available	3617	Open in IMG/M
3300031509\|Ga0308399_1084800	Not Available	645	Open in IMG/M
3300031509\|Ga0308399_1085711	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031509\|Ga0308399_1119128	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031509\|Ga0308399_1122231	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031512\|Ga0308397_1103815	Not Available	607	Open in IMG/M
3300031512\|Ga0308397_1118803	Not Available	553	Open in IMG/M
3300031513\|Ga0308412_1002632	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9646	Open in IMG/M
3300031513\|Ga0308412_1213136	Not Available	518	Open in IMG/M
3300031514\|Ga0308390_1022463	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2055	Open in IMG/M
3300031515\|Ga0308396_1038297	Not Available	1131	Open in IMG/M
3300031515\|Ga0308396_1111639	Not Available	541	Open in IMG/M
3300031515\|Ga0308396_1119346	Not Available	517	Open in IMG/M
3300031516\|Ga0308398_1084847	Not Available	712	Open in IMG/M
3300031516\|Ga0308398_1091230	Not Available	675	Open in IMG/M
3300031516\|Ga0308398_1131414	Not Available	523	Open in IMG/M
3300031517\|Ga0308392_1007045	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3661	Open in IMG/M
3300031517\|Ga0308392_1030775	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1357	Open in IMG/M
3300031517\|Ga0308392_1095006	Not Available	617	Open in IMG/M
3300031518\|Ga0308389_1046279	All Organisms → cellular organisms → Bacteria → FCB group	1215	Open in IMG/M
3300031518\|Ga0308389_1050734	Not Available	1126	Open in IMG/M
3300031567\|Ga0308391_1001071	All Organisms → cellular organisms → Bacteria	11585	Open in IMG/M
3300031567\|Ga0308391_1001375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9855	Open in IMG/M
3300031567\|Ga0308391_1023205	Not Available	1521	Open in IMG/M
3300031567\|Ga0308391_1099022	Not Available	608	Open in IMG/M
3300031568\|Ga0308393_1073227	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	758	Open in IMG/M
3300031568\|Ga0308393_1081603	Not Available	706	Open in IMG/M
3300031568\|Ga0308393_1100917	Not Available	615	Open in IMG/M
3300031568\|Ga0308393_1116517	Not Available	560	Open in IMG/M
3300031568\|Ga0308393_1118871	Not Available	553	Open in IMG/M
3300031767\|Ga0308401_1006963	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300031767\|Ga0308401_1015756	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Candidatus Thermochlorobacteriaceae → Candidatus Thermochlorobacter → Candidatus Thermochlorobacter aerophilum	1753	Open in IMG/M
3300031767\|Ga0308401_1020276	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300031767\|Ga0308401_1065760	Not Available	717	Open in IMG/M
3300031767\|Ga0308401_1099287	Not Available	558	Open in IMG/M
3300031776\|Ga0308415_1108560	Not Available	547	Open in IMG/M
3300031776\|Ga0308415_1113336	Not Available	528	Open in IMG/M
3300031783\|Ga0308418_1081935	Not Available	726	Open in IMG/M
3300031812\|Ga0308411_10162279	Not Available	782	Open in IMG/M
3300031812\|Ga0308411_10255767	Not Available	573	Open in IMG/M
3300031830\|Ga0308409_1113749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	589	Open in IMG/M
3300031865\|Ga0308408_1116343	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	583	Open in IMG/M
3300031875\|Ga0308405_1029018	Not Available	1709	Open in IMG/M
3300031948\|Ga0308406_1087802	Not Available	644	Open in IMG/M
3300031948\|Ga0308406_1098548	Not Available	596	Open in IMG/M
3300031958\|Ga0308410_1048612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1395	Open in IMG/M
3300031958\|Ga0308410_1095288	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300031958\|Ga0308410_1161858	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300032033\|Ga0308402_1010510	Not Available	2181	Open in IMG/M
3300032034\|Ga0308407_1073838	All Organisms → cellular organisms → Bacteria → FCB group	727	Open in IMG/M
3300032045\|Ga0308400_1005078	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3675	Open in IMG/M
3300032045\|Ga0308400_1022095	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1580	Open in IMG/M
3300032045\|Ga0308400_1045041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1002	Open in IMG/M
3300032045\|Ga0308400_1055076	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	874	Open in IMG/M
3300032045\|Ga0308400_1056535	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	859	Open in IMG/M
3300032045\|Ga0308400_1106794	Not Available	565	Open in IMG/M
3300032056\|Ga0308310_1020704	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300032056\|Ga0308310_1059172	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1038	Open in IMG/M
3300032056\|Ga0308310_1105832	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	664	Open in IMG/M
3300032056\|Ga0308310_1136720	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	546	Open in IMG/M
3300032056\|Ga0308310_1139972	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300032058\|Ga0308419_1104817	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	803	Open in IMG/M
3300032058\|Ga0308419_1146439	Not Available	619	Open in IMG/M
3300032058\|Ga0308419_1172253	Not Available	547	Open in IMG/M
3300032356\|Ga0308414_1012995	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4517	Open in IMG/M
3300032356\|Ga0308414_1079498	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1229	Open in IMG/M
3300033886\|Ga0308413_004032	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6890	Open in IMG/M
3300034648\|Ga0372970_059811	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	523	Open in IMG/M
3300034696\|Ga0370516_130327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	99.12%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	99.12%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	97.37%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	73.68%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	11.40%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	11.40%
Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Microbial Mat	1.75%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.88%
Hot Spring Water	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Water	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002510	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300003688	Coassembly of YNP Bryant MS undermat 2012 and YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300005244	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1000_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005251	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005411	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005414	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005452	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300005858	Freshwater microbial communities from Yellowstone National Park, Wyoming, USA - Fairy Falls C (FF_Mn_C) (SPADES assembly)	Environmental	Open in IMG/M
3300006380	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1200_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006848	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006849	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010181	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010190	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010194	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0900_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300026509	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)	Environmental	Open in IMG/M
3300028761	Hot spring microbial mat communities from Yellowstone National Park, WY, United States - YNP-CB-013-3	Environmental	Open in IMG/M
3300031245	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4	Environmental	Open in IMG/M
3300031508	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2	Environmental	Open in IMG/M
3300031509	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60	Environmental	Open in IMG/M
3300031512	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8	Environmental	Open in IMG/M
3300031513	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer	Environmental	Open in IMG/M
3300031514	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_149	Environmental	Open in IMG/M
3300031515	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2	Environmental	Open in IMG/M
3300031516	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9	Environmental	Open in IMG/M
3300031517	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050624_m2	Environmental	Open in IMG/M
3300031518	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_148	Environmental	Open in IMG/M
3300031567	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050623_t1	Environmental	Open in IMG/M
3300031568	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2	Environmental	Open in IMG/M
3300031767	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1	Environmental	Open in IMG/M
3300031776	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS55	Environmental	Open in IMG/M
3300031783	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031830	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4	Environmental	Open in IMG/M
3300031865	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031948	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1	Environmental	Open in IMG/M
3300031958	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore	Environmental	Open in IMG/M
3300032033	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2	Environmental	Open in IMG/M
3300032034	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2	Environmental	Open in IMG/M
3300032045	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65	Environmental	Open in IMG/M
3300032056	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS65	Environmental	Open in IMG/M
3300032058	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300033886	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cd	Environmental	Open in IMG/M
3300034648	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1000_MSt9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034696	Hot spring water microbial communities from Yellowstone National Park, WY, United States - YNP_Buffalopool_103118	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24186J35511_10506931	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	AGGLYYFLSQTFFLGGTSPQRTRSVGRGRSKCPAYHSLVLHPPTPYTPSPLLKGGEGRGEGGSYTHVPCPFGTLLVTLYHFKSKAFLM*
Ga0061020_10973681	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	TQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYSLSPLEKGGEGRGEGGAYTHAPCPFGALLVTLYHLKSKAFLM*
Ga0068644_10099721	3300005244	Anoxygenic And Chlorotrophic Microbial Mat	YHFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLPKGGEGRGEGGSYTRMPCPFGALLVTLYHFKSKA*
Ga0068634_11972761	3300005251	Anoxygenic And Chlorotrophic Microbial Mat	VGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTHVPCPFGALLVTLYHLKSKAFL
Ga0068647_11196781	3300005411	Anoxygenic And Chlorotrophic Microbial Mat	SKCPSYHPPTPYTLSPLLKGGEGRGEGGADTHVPCPFGAFLMTLYYFKSKAFLM*
Ga0068646_11336031	3300005414	Anoxygenic And Chlorotrophic Microbial Mat	VGRGRPSYHPPTPYTLSPLEKGGEGRGEGGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGASPHWVRPQGG
Ga0068706_10167111	3300005452	Anoxygenic And Chlorotrophic	LYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYSLSPLEKGGEGRGEGGAYTHAPCPFGALLVTLYHLKSKAFLM*
Ga0068706_10463521	3300005452	Anoxygenic And Chlorotrophic	GRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCLFGTLLVTLYHLKSCEEEVGTPA*
Ga0068706_10592191	3300005452	Anoxygenic And Chlorotrophic	VGKDWDLYYFLTQTFFLGGTSPQRTCSVGRGRSKCLSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVT
Ga0068706_10677332	3300005452	Anoxygenic And Chlorotrophic	LAQTFFLGGTSPQRTRSVGRGRAKCPSYHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM*
Ga0068706_10690362	3300005452	Anoxygenic And Chlorotrophic	VGRGRSKCPSYHPPTPYTLSPLFKGGEGWGEGGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGASP
Ga0068706_10969102	3300005452	Anoxygenic And Chlorotrophic	CSVGRGRSKCPSYHPPTPYTLSPLSKGGEGRGEGGSYTHVPCPFGALLVTLCQTFSKRFLNGKGDMGGASPHWVRPQGGRTHPRFT*
Ga0068706_10992641	3300005452	Anoxygenic And Chlorotrophic	FLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTYMPCPFGALLVTLYHPKSKAFLM*
Ga0068705_1000056020	3300005453	Anoxygenic And Chlorotrophic	MQDTSFAQTFFLGGTSPQRTRSVGRGCSKCPSYHPTTPYTLSPLLKGGEGRGEGGSYIHVPCPFGALLVTLYHFKSKAFLL*
Ga0068705_1000167116	3300005453	Anoxygenic And Chlorotrophic	SPQRTRSVGRGRSKCPSYHPPTPYTLSPLLEGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLL*
Ga0068705_100997712	3300005453	Anoxygenic And Chlorotrophic	QRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHFKSKAFLM*
Ga0068705_101553141	3300005453	Anoxygenic And Chlorotrophic	VPLYYFLAQTFFLGGTRPQRPRSVGRGRSKCPSYRPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYH
Ga0068705_101701021	3300005453	Anoxygenic And Chlorotrophic	VGKDWDLYYFLTQTFFLGGTSPQRTCSVGRGRSKCLSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTL
Ga0079995_10632506	3300005858	Freshwater	MVLYYFLAQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPSGALLVTLYHFKSKVFLM*
Ga0068664_10354002	3300006380	Anoxygenic And Chlorotrophic Microbial Mat	QTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTHVPCPFGALLVTLYHFKSKAFLM*
Ga0101768_10795481	3300006848	Anoxygenic And Chlorotrophic Microbial Mat	GGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPCPFGALLVTLCHFKSKAFLM*
Ga0102029_10533521	3300006849	Anoxygenic And Chlorotrophic Microbial Mat	HPIGRVRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM*
Ga0124926_10151471	3300010181	Anoxygenic And Chlorotrophic Microbial Mat	QRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFLM*
Ga0124926_11036601	3300010181	Anoxygenic And Chlorotrophic Microbial Mat	QTFFLGGTSPQRTRSVGRGRSKCPSYHPPTLYTLSPLLKGGEGRGEGGSYTHVPCPFEALLVTLYHLKSKAFLM*
Ga0124925_10401291	3300010190	Anoxygenic And Chlorotrophic Microbial Mat	RTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGADTHVPCPFGAFLMTLYYFKSKAFLM*
Ga0124921_11561451	3300010194	Anoxygenic And Chlorotrophic Microbial Mat	LGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLPKGGEGRGEEGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGASPRFTLR
Ga0209809_10140335	3300026509	Anoxygenic And Chlorotrophic	TFFLGGTSPQRTRSVGRGCSKCPSYHPTTPYTLSPLLKGGEGRGEGGSYIHVPCPFGALLVTLYHFKSKAFLL
Ga0272447_10050095	3300028761	Microbial Mat	MCVSSAVPVLFRREEMGRQPKLYHFLTQTFFLGGTRPQRTRSTGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCDLIPPYKSKAFLM
Ga0272447_10260751	3300028761	Microbial Mat	MDWDLYYFLAQTFFLGGTSPQRTCSVGRRRSKCPSYHPPTLYTLSPLLKGGEDRGEGGAYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308395_10015812	3300031245	Hot Spring Phototrophic Mat	MCVSSAVPVLVRREEIGRQPKLCHFLTQTFFLGGTNSQRTCSVGRGRSKCPSYHPPTPYTLSPLLKGEEGRDEGESYTHVPCPFGALLVTLYHLRSKAFLV
Ga0308395_10082114	3300031245	Hot Spring Phototrophic Mat	LYYFLAQTFFLGGTSPQRTRFVGRGRSKCLSCHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSCEEEVGMPA
Ga0308395_10087871	3300031245	Hot Spring Phototrophic Mat	LAQTVFLGGTSPQCTRSVGRGRSKCPSYHSLVLHPPTPSTLSPLLKGGEGRDEGGSDTHVPCPFGALLLTLYHFKSKAFLM
Ga0308395_10099864	3300031245	Hot Spring Phototrophic Mat	VGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTRMPCPFGALLVTLYHFKSKAFLI
Ga0308395_10366962	3300031245	Hot Spring Phototrophic Mat	AVDLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYSLSPLEKGGEGRGEGGAYTHAPCPFGALLVTLYHLKSKAFLM
Ga0308395_10563731	3300031245	Hot Spring Phototrophic Mat	MTAPKYYFLAQTFFLGGTSPQRTRSVGRGCSKCPSYHPPTPYTLSPLPKGGEGRGEGGSYTHVPCPFGALLTLYHLKSKAFLM
Ga0308395_11494501	3300031245	Hot Spring Phototrophic Mat	FLAQTFFLGGTSPQRTRSVGRGRAKCPSYHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM
Ga0308394_10111252	3300031508	Hot Spring Phototrophic Mat	MGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVNLYHLKSKAFLM
Ga0308394_10121134	3300031508	Hot Spring Phototrophic Mat	YYFLAQTFFLGGTSPQRTRSVGRGRSKCPSYHPSTPYTLSPLLKGGEGRGEGGSYTHVPCSFGALLVTLYHFKSKAFWM
Ga0308394_10289673	3300031508	Hot Spring Phototrophic Mat	MLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSHTHVPCPFGALLVTLYHFKSKAFLM
Ga0308394_10401241	3300031508	Hot Spring Phototrophic Mat	GASPQRTHPIGRVRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCSFGALLVTLYHFKSKAFLM
Ga0308394_10866171	3300031508	Hot Spring Phototrophic Mat	MGKDWDLYYFLTQTFFLGGTSPQRTYSVGRGRSKCLSYHPPTPYTLSPLLKGGEGRGEGGAYTYMPCPFGALLVTLYHLKSKAFSM
Ga0308394_10954272	3300031508	Hot Spring Phototrophic Mat	QRTRSVGRGRAKCPSYRPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLMSKAFLM
Ga0308394_11052761	3300031508	Hot Spring Phototrophic Mat	RTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLPKGGEGRSEGGSYTHVPCPFGTPLVTLCQIFSKRFLNGKGDMGGASPSSH
Ga0308394_11096282	3300031508	Hot Spring Phototrophic Mat	DKVRILGVVANSGRGLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTRMPCPFGALLVTLYHFKSKAFLM
Ga0308399_10050462	3300031509	Hot Spring Phototrophic Mat	MDSAHERLRIPMAMKLYYFLAQTFFLGGTSPQRTRSVGRGRSKCPSYHSLVLHPPTPSTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSMAFLM
Ga0308399_10059921	3300031509	Hot Spring Phototrophic Mat	RTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM
Ga0308399_10848001	3300031509	Hot Spring Phototrophic Mat	VKVYHFLTQTFFLGGSSPQRTRSVGRGRSKCPSYHPPTPYTFSPLLKGGEGQGEGGAYTHVPCPFGALLVTLYHSKSKAFLM
Ga0308399_10857111	3300031509	Hot Spring Phototrophic Mat	VGWGVLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHFE
Ga0308399_11191282	3300031509	Hot Spring Phototrophic Mat	LRPLAPLAVDGVGDLYHFLTQTFFLGGTSPQRTRSVGRGRSTCPSYHPPPPYTLSLLLKGGEGRGEGGSYTHVPYPFGALLVTLYHLK
Ga0308399_11222312	3300031509	Hot Spring Phototrophic Mat	VPEAPLLWGGGVLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHFE
Ga0308397_11038151	3300031512	Hot Spring Phototrophic Mat	LGGTSPQRTRSVGRGRAKCPSYRPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLMSKAFLM
Ga0308397_11188031	3300031512	Hot Spring Phototrophic Mat	VGRGRSKCPSYHPPTPYTLSPLSKGGEGRGEGGSYTHVPCPFGALLVTLCQTFSKRFLNGKGDMGGASPHWVRPQGGRTHPRFT
Ga0308412_10026328	3300031513	Hot Spring Phototrophic Mat	YYFLAQTFFLGGTGPQRTRSVERGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGASTHVPCPFGALLVTLYHFKSKAFLM
Ga0308412_12131361	3300031513	Hot Spring Phototrophic Mat	VRCFLYYFLAQTLFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFK
Ga0308390_10224632	3300031514	Hot Spring Phototrophic Mat	LGGSSPQRTRSVGRGRSKCPSYHPPTPYTFSPLLKGGEGQGEGGAYTHVPCPFGALLVTLYHSKSKAFLM
Ga0308396_10382972	3300031515	Hot Spring Phototrophic Mat	FFLGGTSPQRTCSVGRGRSKCPSYHSLVLHPPTPYTLSPLLQGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308396_11116392	3300031515	Hot Spring Phototrophic Mat	MGRQPKLCHFLTQTFFLGGTSPQRTRSVGRGRSKCPSYYPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFLM
Ga0308396_11193461	3300031515	Hot Spring Phototrophic Mat	RPQRTHPIGRVRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308398_10848472	3300031516	Hot Spring Phototrophic Mat	GGTSPQRTRSVGRGRSKCPAYHPPTPYTLSPLLKGGEGRGEGGSYTHVPYPFGALLVTSQRPS
Ga0308398_10912301	3300031516	Hot Spring Phototrophic Mat	PQRTHPIGRVRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCSFGALLVTLYHFKSKAFWM
Ga0308398_11314141	3300031516	Hot Spring Phototrophic Mat	LGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308392_10070451	3300031517	Hot Spring Phototrophic Mat	FAQTFFLGGTSPQRTRSVGRGCSKCPSYHPTTPYTLSPLLKGGEGRGEGGSYIHVPCPFGALLVTLYHFKSKAFLKCEEEVGMPA
Ga0308392_10307752	3300031517	Hot Spring Phototrophic Mat	TSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLRSKAFLM
Ga0308392_10950061	3300031517	Hot Spring Phototrophic Mat	YFLTQTFFLGGTSPQRTCSVGRGRSKCPSYHPPTPYTFSPLLKGGGEGRGEGGSYTRMPCPFGALLVILYHFKSKAFLM
Ga0308389_10462792	3300031518	Hot Spring Phototrophic Mat	LGGTSPQRTRSVGRGRPSYHPPTPYTLSPLEKGGEGRGEGGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGASPHWVRPQGGRTHPFFT
Ga0308389_10507342	3300031518	Hot Spring Phototrophic Mat	RTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTDVPCPFGALLVTLYHSKSKAFLM
Ga0308391_10010715	3300031567	Hot Spring Phototrophic Mat	MQDTSFAQTFFLGGTSPQRTRSVGRGCSKCPSYHPTTPYTLSPLLKGGEGRGEGGSYIHVPCPFGALLVTLYHFKSKAFLL
Ga0308391_100137511	3300031567	Hot Spring Phototrophic Mat	MGGVSPQRSRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALFVTLYHFKSKAFLM
Ga0308391_10232051	3300031567	Hot Spring Phototrophic Mat	VPEDPLLWGGGVLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHFEAKAFLM
Ga0308391_10990221	3300031567	Hot Spring Phototrophic Mat	VGQGRSKRPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYQIFSKR
Ga0308393_10732271	3300031568	Hot Spring Phototrophic Mat	LAQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCSFGALLVTLYHLKSKAFLM
Ga0308393_10816031	3300031568	Hot Spring Phototrophic Mat	MVCKDALYHFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLPKGGEGRGEGGSDTPVPCPFGALLV
Ga0308393_11009171	3300031568	Hot Spring Phototrophic Mat	TSPQRTRSVGRGRSKCPSYHPPTPYTLSPLPKGGEGRGEGGSDTHVPCPFGALLVTLYHLKSKAFLM
Ga0308393_11165171	3300031568	Hot Spring Phototrophic Mat	PQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTHVPCLFGALLVTLYHFKSKAFLM
Ga0308393_11188711	3300031568	Hot Spring Phototrophic Mat	MGGVSPQRSRSVGRGRSKCPSYHPPTPYTLSPLLTGGEGRGEGGSDTHVPCPFGALLVTLCQIFSKR
Ga0308401_10069634	3300031767	Hot Spring Phototrophic Mat	GGSSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTHVPCPFGALLVTLYHPKSKAFLM
Ga0308401_10157562	3300031767	Hot Spring Phototrophic Mat	MLYYFLTQTFFLGGTSPQRTRSVERGRSKCPAYHSLVLHPPTPYTLSPLPKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308401_10202762	3300031767	Hot Spring Phototrophic Mat	MDWDLYYFLKQTFFLSGTSPQRTCSVGRERSKCPSYHPPTPYTLSPLLKGGEGRGKGGSYTHVPCPFGALLVTLYHPKSKAFLI
Ga0308401_10657601	3300031767	Hot Spring Phototrophic Mat	RSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFL
Ga0308401_10992871	3300031767	Hot Spring Phototrophic Mat	VRCFLDHFLAQTFFLGGTSPQRTRSVGRGRSKCPSYHSLVLHPPTPYTFSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308415_11085602	3300031776	Hot Spring Phototrophic Mat	ILPRGALYYFLTQTFFLGGTSPQRTRSVGRGRSKCPAYHPPTPYTLSPLEKGGEGRGEGGSYTHVPRSFGAFLVTLYHLKSKAFLM
Ga0308415_11133361	3300031776	Hot Spring Phototrophic Mat	GGTSPQRTCSVGRGCSKCPSYHPPTPYTLSPHEKGGEGRGEGGAYTHVPCPFGALLMTLYHLKSKAFLM
Ga0308418_10819351	3300031783	Hot Spring Phototrophic Mat	ILYYFLAQTFFLGGTSPQRTRFVGRGRSKCLSCHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSCEEEVGMPA
Ga0308411_101622791	3300031812	Hot Spring Phototrophic Mat	MLYYFLTQTFFLGGTSPQRTRSVERGRSKCPAYHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308411_102557671	3300031812	Hot Spring Phototrophic Mat	MIFCQVFRKWRAKWACLYYFLTQTFFLGGTSPQRTRSMGQGRSKCPSYHPPTPYTLSPLKKGGEGRGEGGSYTHVPCPFGALLVTLYHLKS
Ga0308409_11137492	3300031830	Hot Spring Phototrophic Mat	TSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGADTHVPCPFGAFLMTLYYFKSKAFLM
Ga0308408_11163431	3300031865	Hot Spring Phototrophic Mat	PQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGADTHVPCPFGAFLMTLYYFKSKAFLM
Ga0308405_10290182	3300031875	Hot Spring Phototrophic Mat	VPEAPLLWGGGVLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHFEAKAFLM
Ga0308406_10878021	3300031948	Hot Spring Phototrophic Mat	THVPCPFGGLLVTLYYFLTQTFFLGGTSPQRTCSVRRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM
Ga0308406_10985482	3300031948	Hot Spring Phototrophic Mat	QNFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLEKGGEGRGEGGLYTHVPCPFGALLVTSQRPS
Ga0308410_10486122	3300031958	Hot Spring Phototrophic Mat	TRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFLM
Ga0308410_10952882	3300031958	Hot Spring Phototrophic Mat	FLGGTSPQRTRSVGRGCSKCPSYHPTTPYTLSPLLKGGEGRGEGGSYIHVPCPFGALLVTLYHFKSKAFLKCEEEVGMPA
Ga0308410_11618581	3300031958	Hot Spring Phototrophic Mat	FLGGTCPQRTRSVGRGRSKCPSYHLPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVNLYHFKSKAFLM
Ga0308402_10105101	3300032033	Hot Spring Phototrophic Mat	QTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKSKAFLM
Ga0308407_10738381	3300032034	Hot Spring Phototrophic Mat	NPQRTCSVGRGRSKCPSYHPPTPYTLSPLSKGGEGRGEGGSYTHVPCPFGALLVTLCQTFSKRFLNGKGDMGGASPHWVRPQGGRTHPRFT
Ga0308400_10050781	3300032045	Hot Spring Phototrophic Mat	TCSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTHVPYPFGALLVTLYHPKSKAFLM
Ga0308400_10220951	3300032045	Hot Spring Phototrophic Mat	PQRTCSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGAYTRMPCPFGALLVTLYHF
Ga0308400_10450412	3300032045	Hot Spring Phototrophic Mat	MTRGLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSCTHVPCPFGALLVTLYHFKSKAFLM
Ga0308400_10550761	3300032045	Hot Spring Phototrophic Mat	RTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFLM
Ga0308400_10565352	3300032045	Hot Spring Phototrophic Mat	MDWDLYYFLTQTFFLGGTNPQHTCSVGRERSKCPSYHPPTLYTLSPLLKGGEGRGEGGSYTRMPRPFGALLVTLYHFKSKAFLM
Ga0308400_11067942	3300032045	Hot Spring Phototrophic Mat	QRTCSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGAIPASH
Ga0308310_10207042	3300032056	Hot Spring Phototrophic Mat	VIYYFLTQTFFLGGTSPQRTRSVGRVRSKCPSYHSLVLHPPTPSTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHLKSKAFLM
Ga0308310_10591722	3300032056	Hot Spring Phototrophic Mat	RTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHLKSKAFLM
Ga0308310_11058322	3300032056	Hot Spring Phototrophic Mat	CVPEAPLLWGGGVLYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGRGEGGSYTHVPYPFGALLVTLYHLKSKAFLM
Ga0308310_11367202	3300032056	Hot Spring Phototrophic Mat	GTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLFKGGEGQGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308310_11399722	3300032056	Hot Spring Phototrophic Mat	SPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSYTYVPCPFGALLVTLYHFKSKAFLM
Ga0308419_11048171	3300032058	Hot Spring Phototrophic Mat	TFFLGGTSPQRTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLPKGGEGRGEEGSYTHVPCPFGALLVTLCQIFSKRFLNGKGDMGGASPRFTLR
Ga0308419_11464391	3300032058	Hot Spring Phototrophic Mat	VIYYFLTQTFFLGGTSPQRTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLLKGGEGRGEGGSYTHVPCPFGALLVTLYHLKAKAFLM
Ga0308419_11722531	3300032058	Hot Spring Phototrophic Mat	PFGALLVTLYYFLTQTFFLGGTTPQRTCSVGRGRSKCPSYHPPTPYTLSPLRKGGEGRGEGGSYTHVPCPFGALLVTLYHFKSKAFLM
Ga0308414_10129954	3300032356	Hot Spring Phototrophic Mat	MYPVMRLGRRTLILFPDTDFLFSPQRTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLLKGGEGRGEGGAYTHVLCPFGALLVTLYHFRSKAFLM
Ga0308414_10794981	3300032356	Hot Spring Phototrophic Mat	QTFFLGGTSAQRTRSVGRGRSKCPSYHSLVLHPPTPYTLSPLPKGGEGRGEEGSYTHVSCPFGALLVTLCQIFSKRFLNGKGDMGGASPHWARPPAGRARPSPLHIKKALASKWY
Ga0308413_004032_3_221	3300033886	Hot Spring Phototrophic Mat	FFLGGTSPQRTRSVGRGRSKCPSYHPPTPYTLSPLLKGGEGRGEGGSDTHVPCPFGALLVTLYHFKSKAFLM
Ga0372970_059811_285_521	3300034648	Hot Spring Phototrophic Mat	DLLLFPDTDFLFSPQRTRSVGRVRSKCPSYHPPTPYTLSPLHQGGEGRGEGGSYTYMPCPFGALLVTLYHLKSKAFLM
Ga0370516_130327_604_789	3300034696	Hot Spring Water	TSPQRTRSVRQGRSKCPSYHPPTPYTLSPLLKGGEGQGEGRSDTHLPCPFGALLVTLYPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081383

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences