Metagenome / Metatranscriptome Family F081397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081397
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	123 residues
Representative Sequence	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Number of Associated Samples	87
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.68 %
% of genes near scaffold ends (potentially truncated)	40.35 %
% of genes from short scaffolds (< 2000 bps)	76.32 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.509 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere (9.649 % of family members)
Environment Ontology (ENVO)	Unclassified (37.719 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.175 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 1.99% β-sheet: 41.06% Coil/Unstructured: 56.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.3.1.1: Starch-binding domain	d1vema1	1vem	0.66838
b.3.2.0: automated matches	d5m0yb1	5m0y	0.66694
b.3.1.1: Starch-binding domain	d5ghla_	5ghl	0.65884
b.3.1.1: Starch-binding domain	d3bmva2	3bmv	0.65328
b.3.1.2: Rhamnogalacturonase B, RhgB, middle domain	d3njxa2	3njx	0.65105

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00873	ACR_tran	14.91
PF02518	HATPase_c	4.39
PF00081	Sod_Fe_N	2.63
PF00580	UvrD-helicase	2.63
PF08028	Acyl-CoA_dh_2	1.75
PF08281	Sigma70_r4_2	1.75
PF00174	Oxidored_molyb	1.75
PF02777	Sod_Fe_C	1.75
PF04616	Glyco_hydro_43	1.75
PF07731	Cu-oxidase_2	1.75
PF08974	DUF1877	1.75
PF00857	Isochorismatase	1.75
PF00033	Cytochrome_B	0.88
PF00155	Aminotran_1_2	0.88
PF04542	Sigma70_r2	0.88
PF02771	Acyl-CoA_dh_N	0.88
PF01494	FAD_binding_3	0.88
PF02954	HTH_8	0.88
PF04264	YceI	0.88
PF13517	FG-GAP_3	0.88
PF07676	PD40	0.88
PF09537	DUF2383	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	4.39
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	2.63
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	2.63
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.63
COG3973	DNA helicase IV	Replication, recombination and repair [L]	2.63
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.75
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.75
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.75
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.75
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.75
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.88
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.88
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.88
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.88
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.88
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.88
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
All Organisms	root	All Organisms	46.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
cellular organisms	root	All Organisms → cellular organisms	46.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.86 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.16 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.51 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	10.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.51 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	2.63 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.51 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	2.63 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4.39 %
Chytridiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota	2.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.75 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.88 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Chytridiomycota incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis	2.63 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.75 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Bradymonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	0.88 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.88 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Chytridiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes	2.63 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.75 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.88 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.88 %
Persicimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Chytridiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales	2.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.88 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.88 %
Persicimonas caeni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas → Persicimonas caeni	0.88 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.88 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Chytriomycetaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales → Chytriomycetaceae	2.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Mycobacterium sp. UM_WGJ	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_WGJ	0.88 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.88 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.88 %
Persicimonas caeni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas → Persicimonas caeni	0.88 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Chytriomycetaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales → Chytriomycetaceae	2.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.75 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.88 %
Mycobacterium sp. UM_WGJ	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_WGJ	0.88 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.88 %
Persicimonas caeni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas → Persicimonas caeni	0.88 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11795145	Not Available	523	Open in IMG/M
3300004114\|Ga0062593_100055871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2501	Open in IMG/M
3300004114\|Ga0062593_102895065	Not Available	548	Open in IMG/M
3300004114\|Ga0062593_103201404	Not Available	524	Open in IMG/M
3300004156\|Ga0062589_100311456	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300004157\|Ga0062590_100715346	Not Available	905	Open in IMG/M
3300005093\|Ga0062594_100347853	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005093\|Ga0062594_100541029	Not Available	1000	Open in IMG/M
3300005290\|Ga0065712_10403656	Not Available	728	Open in IMG/M
3300005290\|Ga0065712_10604522	Not Available	589	Open in IMG/M
3300005328\|Ga0070676_10003800	All Organisms → cellular organisms → Bacteria	7921	Open in IMG/M
3300005328\|Ga0070676_10095790	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300005329\|Ga0070683_100267342	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300005329\|Ga0070683_101441551	Not Available	662	Open in IMG/M
3300005330\|Ga0070690_100029340	All Organisms → cellular organisms → Bacteria	3411	Open in IMG/M
3300005330\|Ga0070690_100029412	All Organisms → cellular organisms → Bacteria	3408	Open in IMG/M
3300005332\|Ga0066388_100916722	Not Available	1452	Open in IMG/M
3300005333\|Ga0070677_10414109	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005334\|Ga0068869_102115852	Not Available	506	Open in IMG/M
3300005335\|Ga0070666_10586728	Not Available	813	Open in IMG/M
3300005336\|Ga0070680_101289259	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales → Chytriomycetaceae	632	Open in IMG/M
3300005337\|Ga0070682_100415635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300005338\|Ga0068868_101626008	Not Available	607	Open in IMG/M
3300005338\|Ga0068868_101920506	Not Available	561	Open in IMG/M
3300005340\|Ga0070689_101190531	Not Available	684	Open in IMG/M
3300005340\|Ga0070689_102138769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_WGJ	513	Open in IMG/M
3300005341\|Ga0070691_10480218	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005341\|Ga0070691_10732516	Not Available	596	Open in IMG/M
3300005355\|Ga0070671_101769945	Not Available	549	Open in IMG/M
3300005364\|Ga0070673_101177153	Not Available	718	Open in IMG/M
3300005364\|Ga0070673_101460278	Not Available	644	Open in IMG/M
3300005365\|Ga0070688_100066838	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300005365\|Ga0070688_100099378	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300005365\|Ga0070688_100140168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1641	Open in IMG/M
3300005440\|Ga0070705_100085897	Not Available	1946	Open in IMG/M
3300005456\|Ga0070678_100910823	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales → Chytriomycetaceae	804	Open in IMG/M
3300005458\|Ga0070681_10444622	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005466\|Ga0070685_11097690	Not Available	601	Open in IMG/M
3300005530\|Ga0070679_100568483	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005535\|Ga0070684_100176413	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300005547\|Ga0070693_101433346	Not Available	538	Open in IMG/M
3300005548\|Ga0070665_101555102	Not Available	670	Open in IMG/M
3300005560\|Ga0066670_10406285	Not Available	835	Open in IMG/M
3300005617\|Ga0068859_100632075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1163	Open in IMG/M
3300005718\|Ga0068866_10365355	Not Available	921	Open in IMG/M
3300006046\|Ga0066652_100689944	Not Available	971	Open in IMG/M
3300006358\|Ga0068871_101706607	Not Available	597	Open in IMG/M
3300009156\|Ga0111538_12050073	Not Available	719	Open in IMG/M
3300009177\|Ga0105248_11967372	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010375\|Ga0105239_11119440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	907	Open in IMG/M
3300010399\|Ga0134127_13254625	Not Available	531	Open in IMG/M
3300010401\|Ga0134121_10132101	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300010403\|Ga0134123_10426603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1225	Open in IMG/M
3300010403\|Ga0134123_11005169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	850	Open in IMG/M
3300012212\|Ga0150985_114699300	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012353\|Ga0137367_10059697	Not Available	2850	Open in IMG/M
3300012354\|Ga0137366_10081817	Not Available	2456	Open in IMG/M
3300012905\|Ga0157296_10250674	Not Available	594	Open in IMG/M
3300012988\|Ga0164306_10602630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	860	Open in IMG/M
3300013297\|Ga0157378_11963503	Not Available	635	Open in IMG/M
3300014318\|Ga0075351_1065772	Not Available	710	Open in IMG/M
3300014325\|Ga0163163_11191818	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300014325\|Ga0163163_12019659	Not Available	636	Open in IMG/M
3300015371\|Ga0132258_10353703	Not Available	3633	Open in IMG/M
3300015371\|Ga0132258_10739684	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300015371\|Ga0132258_12182890	Not Available	1390	Open in IMG/M
3300015373\|Ga0132257_100159719	Not Available	2647	Open in IMG/M
3300015373\|Ga0132257_104623584	Not Available	501	Open in IMG/M
3300015374\|Ga0132255_101643130	Not Available	974	Open in IMG/M
3300015374\|Ga0132255_104944193	Not Available	564	Open in IMG/M
3300018031\|Ga0184634_10336752	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300018482\|Ga0066669_10639203	Not Available	935	Open in IMG/M
3300019361\|Ga0173482_10102530	Not Available	1041	Open in IMG/M
3300019361\|Ga0173482_10297885	Not Available	708	Open in IMG/M
3300021415\|Ga0193694_1015117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	1053	Open in IMG/M
3300022756\|Ga0222622_10012025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4152	Open in IMG/M
3300024187\|Ga0247672_1011877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300025903\|Ga0207680_10564619	Not Available	813	Open in IMG/M
3300025905\|Ga0207685_10190458	Not Available	957	Open in IMG/M
3300025907\|Ga0207645_10001023	All Organisms → cellular organisms → Bacteria	23127	Open in IMG/M
3300025912\|Ga0207707_10485997	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300025918\|Ga0207662_10016740	All Organisms → cellular organisms → Bacteria	4141	Open in IMG/M
3300025923\|Ga0207681_11244979	Not Available	625	Open in IMG/M
3300025930\|Ga0207701_10030984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5046	Open in IMG/M
3300025930\|Ga0207701_10107694	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300025930\|Ga0207701_11724487	Not Available	500	Open in IMG/M
3300025933\|Ga0207706_10104370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2494	Open in IMG/M
3300025936\|Ga0207670_11334980	Not Available	608	Open in IMG/M
3300025938\|Ga0207704_10001852	Not Available	9473	Open in IMG/M
3300025940\|Ga0207691_10103696	Not Available	2536	Open in IMG/M
3300025940\|Ga0207691_10755590	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300025942\|Ga0207689_10065964	All Organisms → cellular organisms → Bacteria	2977	Open in IMG/M
3300025944\|Ga0207661_10005277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	9097	Open in IMG/M
3300025944\|Ga0207661_10071079	Not Available	2843	Open in IMG/M
3300025944\|Ga0207661_11239469	Not Available	686	Open in IMG/M
3300025960\|Ga0207651_11543047	Not Available	598	Open in IMG/M
3300025986\|Ga0207658_10463974	Not Available	1123	Open in IMG/M
3300026023\|Ga0207677_10273965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1382	Open in IMG/M
3300026088\|Ga0207641_12195060	Not Available	552	Open in IMG/M
3300026121\|Ga0207683_10833245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	856	Open in IMG/M
3300026121\|Ga0207683_10848059	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Chytridiomycetes → Chytridiales → Chytriomycetaceae	848	Open in IMG/M
3300026142\|Ga0207698_12720116	Not Available	503	Open in IMG/M
3300027614\|Ga0209970_1073603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	637	Open in IMG/M
3300027617\|Ga0210002_1043408	Not Available	766	Open in IMG/M
3300028380\|Ga0268265_10127473	Not Available	2109	Open in IMG/M
3300028768\|Ga0307280_10001779	All Organisms → cellular organisms → Bacteria	5243	Open in IMG/M
3300031058\|Ga0308189_10368395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	584	Open in IMG/M
3300031716\|Ga0310813_10066033	All Organisms → cellular organisms → Bacteria → Proteobacteria	2717	Open in IMG/M
3300031716\|Ga0310813_11059267	Not Available	742	Open in IMG/M
3300031858\|Ga0310892_11170225	Not Available	547	Open in IMG/M
3300031938\|Ga0308175_100673079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae → Persicimonas → Persicimonas caeni	1121	Open in IMG/M
3300032075\|Ga0310890_10034073	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300032122\|Ga0310895_10019775	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300032211\|Ga0310896_10552944	Not Available	637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.02%
Host-Associated	Host-Associated	42.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.26%
Plants	Host-Associated → Plants	42.98%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.54%
Roots	Host-Associated → Plants → Roots	2.63%
Sediment	Environmental → Aquatic → Sediment	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.70%
Loam	Environmental → Terrestrial → Soil → Loam	23.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	22.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.88%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_117951451	3300000891	Soil	RMTRFGLHIALGALAVVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0062593_1000558714	3300004114	Soil	MTRFGLHIALGALAVVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0062593_1028950651	3300004114	Soil	MTRHGLYGLALAAMAAISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTNSVFVGCNTITDIGQV
Ga0062593_1032014041	3300004114	Soil	MGEQGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSM
Ga0062589_1003114561	3300004156	Soil	MTRHGLYGLALAAMAAISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSAMAGVTPDLAGGVTHGISLTLFDAGNNVLSQTPTNSVFVGCNTITDIGQVEFSLTP*
Ga0062590_1007153462	3300004157	Soil	MTRDGLRIAMVVLAAVSTGAVSCGGGSSSSCAANVAAEWIITENGVVVACLPGDEVDINVDGMAATFPCSDGTGVTPDLAGGLNHAVSLTLFDASGNPLSQTQTMSVFVPCGTVTDIGQVQFAVAP*
Ga0062594_1003478532	3300005093	Soil	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMS
Ga0062594_1005410291	3300005093	Soil	QGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP*
Ga0065712_104036561	3300005290	Miscanthus Rhizosphere	MGEQGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP*
Ga0065712_106045222	3300005290	Miscanthus Rhizosphere	SRSPDRAARERTTMVRHGLREMALAALVAVSTAAIGCGGGGTSSCAANVTAEWIVTQNGVVVQCLPGDEVDINIGSMAATFNCSAGAGTTPALAGGITYPIDLTLFDANSNVLSQTQSMNIFVPCGTITDIGQVEFSLTP*
Ga0070676_100038001	3300005328	Miscanthus Rhizosphere	MTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0070676_100957902	3300005328	Miscanthus Rhizosphere	MTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP*
Ga0070683_1002673422	3300005329	Corn Rhizosphere	MTRHLLQKIGLGVLAVVCTGAIGCGGGGSGSCGANVAAEWVLTENGAQVSCLPGDEVDINVESMQAPFACGAMAGTTPTLAGGVSYNISLTLFDASNNVLSQTPTNNVFVPCGTVTDIGVVEFSLTP*
Ga0070683_1014415511	3300005329	Corn Rhizosphere	MNMTRVAVIGLSALITAALGCGGGSSSCSANVAAEWVLTQNGTQVSCVPGDEVDINVDGMTATFACSAGAGTTPAVAGGVSHNVSLGLFDSSGNNLSQTQTMSLF
Ga0070690_1000293401	3300005330	Switchgrass Rhizosphere	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0070690_1000294122	3300005330	Switchgrass Rhizosphere	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLNHAVSLTLFDASGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP*
Ga0066388_1009167221	3300005332	Tropical Forest Soil	MTRDRLRIALVMLAAVSIGAIGCGGGGSSSCAANVAAEWIVTENGVVVACLPGDEVDINVDSMAATFPCSDGTGITPDLAGGLNHAISLTLFDASGNPLSQTQTMSVFVPCGSVTDIGQVQFSVTP*
Ga0070677_104141092	3300005333	Miscanthus Rhizosphere	MTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVF
Ga0068869_1021158521	3300005334	Miscanthus Rhizosphere	MTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQ
Ga0070666_105867281	3300005335	Switchgrass Rhizosphere	MITRIVGGMTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0070680_1012892591	3300005336	Corn Rhizosphere	MTQFRLQTIMLGVLAAVALGAIGCGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVP
Ga0070682_1004156352	3300005337	Corn Rhizosphere	MTMARYGLKKIVLVALAAVSIGAVGCGGGSSSCSANVAAEWVLTENGVQVACQPGDEVDLNVDSMTATFACSAGGGTTPSLAGGVYHNIDLTLFDAASTSLSQTQTMSVFVACGAITDIGVVEFSLTP*
Ga0068868_1016260082	3300005338	Miscanthus Rhizosphere	MGEQGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVI
Ga0068868_1019205061	3300005338	Miscanthus Rhizosphere	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLNHAVSLTLFDASGNPLSQTPTNSVFVPCGSVTDIGQVQFA
Ga0070689_1011905312	3300005340	Switchgrass Rhizosphere	MTQHRLQTILFVLLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVPCNTITDIGLAEFSLTP*
Ga0070689_1021387691	3300005340	Switchgrass Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPTMSVFVGC
Ga0070691_104802181	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTM
Ga0070691_107325161	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MGEQGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDINIGSMAATFNCSAGAGTTPALAGGITYPIDLTLFDANSNVLSQTQSMNIFVPCGTI
Ga0070671_1017699451	3300005355	Switchgrass Rhizosphere	MTGHGLQKLALIALAALAGGALGCGGGGSSCLANVAAEWFVTENNAQVSCLPGDEVDINVDDMSATFACSAGAGTTPALAGGFNRNISLTLFDASSNVLSQTPTHAVFVACGAITDIGQVEFSLTP*
Ga0070673_1011771531	3300005364	Switchgrass Rhizosphere	MTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0070673_1014602781	3300005364	Switchgrass Rhizosphere	TKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP*
Ga0070688_1000668382	3300005365	Switchgrass Rhizosphere	MTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP*
Ga0070688_1000993781	3300005365	Switchgrass Rhizosphere	MTRFGLHIALGALALVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0070688_1001401681	3300005365	Switchgrass Rhizosphere	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLTHAVSLTLFDASGNPLSQTP
Ga0070705_1000858971	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TRIVGGMTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0070678_1009108231	3300005456	Miscanthus Rhizosphere	MTQFRLQTIMLGVLAAVALGAIGCGGSSSCSANVTAQWVVTENGQQVACLPGDEVDINVDDLSATFVCSAMAGTTPALRGGVNHLIDFTLFDASSNVLSQTQAMTVFVPCNSITDVGLVEFSLTP*
Ga0070681_104446222	3300005458	Corn Rhizosphere	MTRQVLEKIGLGVLALVCTGAIGCGGGGSGSCGANVAAEWVLTENGAQVSCLPGDEVDINVESMQAPFACGAMAGTTPTLAGGVSYNISLTLFDASNNVLSQTPTNNVFVPCGTITDIGVVEFSLTP*
Ga0070685_110976901	3300005466	Switchgrass Rhizosphere	NDRGAARCTKGGKGGRMTRFGLHIALGALAVVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0070679_1005684832	3300005530	Corn Rhizosphere	MTRQVLEKIGLGALALVCTGAIGCGGGGSGSCGANVAAEWVLTENGAQVSCLPGDEVDINVESMQAPFACGAMAGTTPTLAGGVSYNISLTLFDASNNVLSQTPTNNVFVP*
Ga0070684_1001764132	3300005535	Corn Rhizosphere	MNMTRVAVIGLSALITAALGCGGGSSSCSANVAAEWVLTQNGTQVSCVPGDEVDINVDGMTATFACSAGAGTTPAVAGGVSHNVSLGLFDSSGNNLSQTQTMSLFVPCGTITDIGQVEFAL*
Ga0070693_1014333461	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFGLHIALGALAVVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPC
Ga0070665_1015551021	3300005548	Switchgrass Rhizosphere	LVEPPGGRKGGRGMTMTQHRLQTILFVLLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVPCNTITDIGLAEFSLTP*
Ga0066670_104062852	3300005560	Soil	MMMMTRHGLHTIALAALAAVAMVGVGCGGGSSGCSADVAAEWVLTENGAQVSCVPGDEVDINVNDLSATFPCSAGAGTTPALAGGVYHNISLTLFDASSTPLSQTQTMSVFVACGATTDIGVVEFSLTP*
Ga0068859_1006320751	3300005617	Switchgrass Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0068866_103653551	3300005718	Miscanthus Rhizosphere	ISISCGGGSSSCPANLAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP*
Ga0066652_1006899441	3300006046	Soil	MVLAAAFTGTVGCGGGGSSSCSANVAAEWVLTENGAQVSCLPGDEVDINVDSMTATFACSAGAGTTPALAGGVTHTIDLTLFDASGNSLSQTPANSVFV
Ga0068871_1017066071	3300006358	Miscanthus Rhizosphere	MARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDINIGSMAATFNCSAGAGTTPALAGGITYPIDLTLFDANSNVLSQTQSMNIFVPCVTITDIGQVEFSLTP*
Ga0111538_120500732	3300009156	Populus Rhizosphere	MTRHGLQKLTLVVLGALAASALGCGGGGNSCLANVAAEWFVTENGVQVSCLPGDEVDINVDDMSATFACSAGAGTTPALAGGFNRAISLTLFDASSNVLSQTPTNSVFVPCGAITDIGQVEFSLTP*
Ga0105248_119673721	3300009177	Switchgrass Rhizosphere	MTMTQHRLQTILFVLLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVPCNTITDIGLAEFSLTP*
Ga0105239_111194401	3300010375	Corn Rhizosphere	TISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP*
Ga0134127_132546251	3300010399	Terrestrial Soil	MTMTQFRLQTIMLGVLAAVALGAIGCGGSSSCSANVTAQWVVTENGQQVACLPGDEVDINVDDLSATFVCSAMAGTTPALRGGVNHLIDFTLFDASSNVLSQTQAMTVFVPCNSITDVGLVEFSLTP*
Ga0134121_101321014	3300010401	Terrestrial Soil	GALALVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0134123_104266031	3300010403	Terrestrial Soil	MITRIVGGMTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP*
Ga0134123_110051691	3300010403	Terrestrial Soil	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLNHAVSPTLFDASGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP*
Ga0150985_1146993001	3300012212	Avena Fatua Rhizosphere	TKTRQGVMTMTRYGMRKITLVALAAVSMGAVGCGGGGSNTCAANVAAEWVLTENGVQVSCQPGDEVDINVDDMSATFACSAGGGTTASLAGGVNHDIDLTLFDASSNTLSQTQTMRVFVACGAITDLGVVEFSLTP*
Ga0137367_100596971	3300012353	Vadose Zone Soil	MTMTRYGMHKITFFALAAVSIGAVGCGGGGSSFCSANVAAEWVLTENGVQVSCQPGDEVDINVDDMSATFACSAGAGTTASLAGGVNHDIDLTLFDASSNSLSQTQTMRVFVACDAITDIGLVEFSLTP*
Ga0137366_100818173	3300012354	Vadose Zone Soil	MTMTRYGMHKITFFALAAVSIGAVGCGGGGSSFCSANVAAEWVLTENGVQVSCQPGDEVDINVDDMSATFACSAGAGTTASLAGGVNHDIDLTLFDASSNSLSQTQ
Ga0157296_102506742	3300012905	Soil	MTRLFEPPVNGWAAGGMTMTQYRLQTILFVVLAAVATGANGCGGSSRSCSANVTARWVVTENGVQVSCLPGDEVDINVGDMTATFACSAMAGTTPALAGGLTYAIDLPLFDASSNVLSQTPTNSVFVPCGAITDIGQVEFSLTP*
Ga0164306_106026302	3300012988	Soil	MTMARYGLKKIVLVALAAVSIGAVGCGGGSSSCSANVAAEWVLTENGVQVACQPGDEVDLNVDSMTATFACSAGQGTTPSLAGGVYHNIDLTLFDAASTSLSQTQTMSVFVACGAITDIGVVDFSLTP*
Ga0157378_119635031	3300013297	Miscanthus Rhizosphere	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLTHAVSLTLFDASGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP*
Ga0075351_10657722	3300014318	Natural And Restored Wetlands	MTRYGLHLALGALAVISTGTVGCGGGSNSCGANVAAEWIVTENSVVVACLPGDEVDINVDSMSATFACAAGAGTTPDLAGGINHGISLTLFDASGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0163163_111918182	3300014325	Switchgrass Rhizosphere	MTRFGLHIALGALALVSTGDVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP*
Ga0163163_120196591	3300014325	Switchgrass Rhizosphere	MGEQGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPC
Ga0132258_103537031	3300015371	Arabidopsis Rhizosphere	MITRIVGRMTMTRHGLYGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP*
Ga0132258_107396843	3300015371	Arabidopsis Rhizosphere	MEGRPGGIVMTREGLRIAMVVLAAVSTGAVGCGGGSSSCAANVAAEWIITENGAVVSCLPGDEVDINVDGMAVTFPCSDGTGITPDLAGGLNHAVSLTLFDGSGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP*
Ga0132258_121828902	3300015371	Arabidopsis Rhizosphere	MTMTQHRLQTILFILLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALAGGLTYPIDLTLFDASSNVLSQTQVMNVPVPCNTITDIGLAEFSLTP*
Ga0132257_1001597191	3300015373	Arabidopsis Rhizosphere	MITRIVGRMMMTRHGRFGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP*
Ga0132257_1046235841	3300015373	Arabidopsis Rhizosphere	MTRDGLRIAMVVLAAVSTGAVSCGGGSSSCAANVAAEWIIMENGAVVSCLPGDEVDINVDGMAVTFPCSDGTGITPDLAGGLNHAVSLTLFDGSGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP*
Ga0132255_1016431302	3300015374	Arabidopsis Rhizosphere	MMMTRHGRFGLVLAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP*
Ga0132255_1049441932	3300015374	Arabidopsis Rhizosphere	CGGGGSSCLANVAAEWFVTENNVQVSCLPGDEVDINVDDMAATFACSAGAGTTPALAGGFNRAISLTLFDASSNVLSQTPTNSVFVPCGAITDIGQVEFSLTP*
Ga0184634_103367521	3300018031	Groundwater Sediment	GGGTSACSAQVAAEWILTENGVQVTCQPGDEVDINVDSMSATFACSDGGGTTASLAGGVNHNIDLTLFDAASTSLSQTQTMSVFVACGAITDIGLVEFSLTP
Ga0066669_106392032	3300018482	Grasslands Soil	MMKRYRLHTMALMVLAAAFTGTVGCGGGGSSSCSANVAAEWVLTENGAQVSCLPGDEVDINVDSMTATFACSAGAGTTPALAGGVTHTIDLTLFDASGNSLSQTPANSVFVPCGTITDIGQVEFSVTF
Ga0173482_101025302	3300019361	Soil	MTRFGLHIALGALAVVSTGAVGCGGGSSACGANVAAEWIVTENGALVSCLPGDGVDINVDSLRATFVCSDGAGTTPDLAGGINHAISLTLFDSSGAVLSQTPTMSVFVPCDSITDIGQVEFSLTP
Ga0173482_102978851	3300019361	Soil	MSHSSFSRRTFIKTSALAASALGCGGGGSSCLANVAAEWFVTENGVQVSCLPGDEVDINVDDMSATFACSAGAGTTPALAGGFNRAISLTLFDASSNVLSQTPTNSVFVPCGAITDIGQVEFSLTP
Ga0193694_10151172	3300021415	Soil	MTMTRYGLRKIVLVALAAVAAGVFGCGGSSSSCSANVAAEWVLTENGVQVSCQPGDEVDINVDSMSATFACSDGGGTTASLAGGVNHNIDLTLFDASSTSLSQTQTMSLFVPCGVTTDIGLVEFSLTP
Ga0222622_100120251	3300022756	Groundwater Sediment	VMTMTRYGLHKIALVALAAVSTGAVGCGGGTSACSAQVAAEWILTENGVQVTCQPGDEVDINVDSMSATFACSDGGGTTASLAGGVNHNIDLTLFDAASTSLSQTQTMSVFVACGAITDIGLVEFSLTP
Ga0247672_10118772	3300024187	Soil	MAFIALAAIAAGGIGCGGGSSSCAANVAAEWFLTENGAQVSCVPGDEVDINVTNLTTSFVCSDMAGTTATVAGGVSHAISLSLFDATNTLLSQTETRSVFVPCGTITDIGLVEFSLTP
Ga0207680_105646192	3300025903	Switchgrass Rhizosphere	MTMTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Ga0207685_101904581	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GCGGGGSSSCGANVAAEWIITENGVVVSCLPGDEVDINVDGMAVTFPCSDGTGTTPNLAGGLNHAVSLTLFDASGNPLSQTPTNSVFVPCGTVTDIGQVQFSVTP
Ga0207645_100010234	3300025907	Miscanthus Rhizosphere	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Ga0207707_104859971	3300025912	Corn Rhizosphere	MTRQVLEKIGLGALALVCTGAIGCGGGGSGSCGANVAAEWVLTENGAQVSCLPGDEVDINVESMQAPFACGAMAGTTPTLAGGVSYNISLTLFDASNNVLSQTPTNNVFVPCGTITDIGVVEFSLTP
Ga0207662_100167404	3300025918	Switchgrass Rhizosphere	MLMTRHGLRIALVVLAAVSTAAVGCGGGGSSSCAANVAAEWIITENGVVVSCLPGDEVDINVDGMAATFPCSDGTGITPDLAGGLNHAVSLTLFDASGNPLSQTPTNSVFVPCGSVTDIGQVQFAVTP
Ga0207681_112449791	3300025923	Switchgrass Rhizosphere	MTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP
Ga0207701_100309845	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MVRHGLREMALAALVAVSTAAIGCGGGGTSSCAANVTAEWIVTQNGVVVQCLPGDEVDINIGSMAATFNCSAGAGTTPALAGGITYPIDLTLFDANSNVLSQTQSMNIFVPCGTITDIGQVEFSLTP
Ga0207701_101076942	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LVEPPGGRKGGRGMTMTQHRLQTILFVLLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVPCNTITDIGLAEFSLTP
Ga0207701_117244871	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPT
Ga0207706_101043702	3300025933	Corn Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Ga0207670_113349802	3300025936	Switchgrass Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPT
Ga0207704_1000185210	3300025938	Miscanthus Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Ga0207691_101036963	3300025940	Miscanthus Rhizosphere	MTQHRLQTILFVLLAAVATGAIGCGGGSSSCSANVTAQWVVTENGAQVSCLPGDEVDINVGDMTATFACSAMAGTTPALPGGLTYPIDLTLFDASSSVLSQTQVMNVPVPCNTITDIGLAEFSLTP
Ga0207691_107555902	3300025940	Miscanthus Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHGISLTLFDAGNNVLSQTPTMSVFVGCNTITD
Ga0207689_100659643	3300025942	Miscanthus Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTMSVFVPCDSITDIGQVEFSLTP
Ga0207661_100052779	3300025944	Corn Rhizosphere	MARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP
Ga0207661_100710793	3300025944	Corn Rhizosphere	MTRHLLQKIGLGVLAVVCTGAIGCGGGGSGSCGANVAAEWVLTENGAQVSCLPGDEVDINVESMQAPFACGAMAGTTPTLAGGVSYNISLTLFDASNNVLSQTPTNNVFVPCGTVTDIGVVEFSLTP
Ga0207661_112394692	3300025944	Corn Rhizosphere	MNMTRVAVIGLSALITAALGCGGGSSSCSANVAAEWVLTQNGTQVSCVPGDEVDINVDGMTATFACSAGAGTTPAVAGGVSHNVSLGLFDSSGNNLSQTQTMS
Ga0207651_115430471	3300025960	Switchgrass Rhizosphere	TKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP
Ga0207658_104639741	3300025986	Switchgrass Rhizosphere	MGGGETMMTGHGLQKLALIALAALAGGALGCGGGGSSCLANVAAEWFVTENNAQVSCLPGDEVDINVDDMSATFACSAGAGTTPALAGGFNRNISLTLFDASSNVLSQTPTHAVFVACGAITDIGQVEFSLTP
Ga0207677_102739651	3300026023	Miscanthus Rhizosphere	MARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLT
Ga0207641_121950601	3300026088	Switchgrass Rhizosphere	QGETKMARHGLREMALAALVAVSTAAIGCGGDGTSSCAANVTAEWVVTQNGVVVQCLPGDEVDLNIGAMSATFNCSAGAGTSPSLAGGVSYPIDLTLFDASSNVLSQTQSMNVFLPCGVITDIGQVEFSLTP
Ga0207683_108332451	3300026121	Miscanthus Rhizosphere	MTRHGLYGLALAALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSV
Ga0207683_108480591	3300026121	Miscanthus Rhizosphere	MTQFRLQTIMLGVLAAVALGAIGCGGSSSCSANVTAQWVVTENGQQVACLPGDEVDINVDDLSATFVCSAMAGTTPALRGGVNHLIDFTLFDASSNVLSQTQAMTVFVPCNSITDVGLVEFSLTP
Ga0207698_127201161	3300026142	Corn Rhizosphere	AALATISIGCGGGSSSCPANVAAEWIVTENSVVVSCLPGDEVDINVDSMRATFACSDMAGITPDLAGGVTHGISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP
Ga0209970_10736032	3300027614	Arabidopsis Thaliana Rhizosphere	MTRHGLYGLALAAMAAISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSAMAGVTPDLAGGVTHGISLTLFDAGNNVLSQTPTNSVFVGCNTITDIG
Ga0210002_10434082	3300027617	Arabidopsis Thaliana Rhizosphere	MTRHGLYGLALAAMAAISIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSAMAGVTPDLAGGVTHGISLTLFDAGNNVLSQTPTNSVFVGCNTITDIGQVEFSLTP
Ga0268265_101274732	3300028380	Switchgrass Rhizosphere	MTMTRHGLYGLALAALAAISISCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTRSVFVGCNTITDIGQVEFSLTP
Ga0307280_100017794	3300028768	Soil	MTRYGLRKIVLVALAAVAAGVFGCGGSSSSCSANVAAEWVLTENGVQVSCQPGDEVDINVDSMSATFACSDGGGTTASLAGGVNHNIDLTLFDASSTSLSQTQTMSLFVPCGVTTDIGLVEFSLTP
Ga0308189_103683952	3300031058	Soil	STKGRQGVMTMTRYGMHKITFLALAAVSIGAVGCGGGGSSFCSANVAAEWVLTENGVQVSCQPGDEVDINVDDMSATFACSAGAGTTASLAGGVNHDIDLTLFDASSNSLSQTQTMRVFVACDAITDIGLVEFSLTP
Ga0310813_100660335	3300031716	Soil	MAFIALAAIAAGGIGCGGGSSSCAANVAAEWFLTENGAQVSCVPGDEVDINVTNLTTSFVCSDMAGTTATVAGGVSHAISLSLFDATNTLLSQTETRSVFVPCGTITDIGLVEFSL
Ga0310813_110592671	3300031716	Soil	MTRYGLHVALAALAVISSGLAGCGGGSSSSCGANVAAEWIVTENGALVSCLPGDEVDINVDSLRATFPCSDGAGTTPDLAGGLNHAISLTLFDPSGVVLSQTPTMSVFVPCDSITDIGQVEFSLTP
Ga0310892_111702251	3300031858	Soil	HGLYGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENSVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP
Ga0308175_1006730792	3300031938	Soil	MKRYGLQHMMALIGLAAVCTAGVGCGSSSSSCGANVTAAWVVTENGAQVACLPGDEVDINVDSMNAPFDCSAMAGTTPTLAGGLNHNVSLTLLDSSANVLAQSSTTSVFVPCGTITDLGTYEFALSP
Ga0310890_100340731	3300032075	Soil	MTMTRHGLYGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP
Ga0310895_100197753	3300032122	Soil	MTRHGLYGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPARSVFVGCNTITDIGQVEFSLTP
Ga0310896_105529441	3300032211	Soil	YGLALAALAAISIGGIGCGGGSSSCPANVAAEWIVTENTVVVACLPGDEVDINVDSMRATFPCSDMAGITPDLAGGVNHSISLTLFDAGNNVLSQTPTMSVFVGCNTITDIGQVEFSLTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences