Metagenome Family F081611

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081611
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	72 residues
Representative Sequence	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQ
Number of Associated Samples	90
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.54 %
% of genes near scaffold ends (potentially truncated)	34.21 %
% of genes from short scaffolds (< 2000 bps)	92.11 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.807 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.544 % of family members)
Environment Ontology (ENVO)	Unclassified (29.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.526 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.61% β-sheet: 25.00% Coil/Unstructured: 51.39%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF03631	Virul_fac_BrkB	2.63
PF01734	Patatin	1.75
PF13579	Glyco_trans_4_4	1.75
PF03401	TctC	0.88
PF17200	sCache_2	0.88
PF04392	ABC_sub_bind	0.88
PF12832	MFS_1_like	0.88
PF02781	G6PD_C	0.88
PF00400	WD40	0.88
PF00571	CBS	0.88
PF07687	M20_dimer	0.88
PF00816	Histone_HNS	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.63
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.75
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.75
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.75
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.88
COG2916	DNA-binding protein H-NS	Transcription [K]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
All Organisms	root	All Organisms	27.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
cellular organisms	root	All Organisms → cellular organisms	27.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.39 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.88 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	1.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.88 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0607901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1687	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1013230	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10012738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2316	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1007428	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300000787\|JGI11643J11755_11683651	Not Available	796	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10026899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1361	Open in IMG/M
3300000955\|JGI1027J12803_100260830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1400	Open in IMG/M
3300000955\|JGI1027J12803_101491738	Not Available	880	Open in IMG/M
3300000956\|JGI10216J12902_112940327	Not Available	814	Open in IMG/M
3300005178\|Ga0066688_10472975	Not Available	809	Open in IMG/M
3300005332\|Ga0066388_100086416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3537	Open in IMG/M
3300005332\|Ga0066388_101827800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300005332\|Ga0066388_102690435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300005332\|Ga0066388_106386982	Not Available	594	Open in IMG/M
3300005435\|Ga0070714_101481712	Not Available	663	Open in IMG/M
3300005471\|Ga0070698_100722530	Not Available	939	Open in IMG/M
3300005536\|Ga0070697_100091290	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300005536\|Ga0070697_100094253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2480	Open in IMG/M
3300005536\|Ga0070697_102069624	Not Available	510	Open in IMG/M
3300005540\|Ga0066697_10493013	Not Available	697	Open in IMG/M
3300005561\|Ga0066699_10650073	Not Available	756	Open in IMG/M
3300005561\|Ga0066699_11051447	Not Available	562	Open in IMG/M
3300005575\|Ga0066702_10653907	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_100900054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1601	Open in IMG/M
3300005764\|Ga0066903_101373313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300005937\|Ga0081455_10397316	Not Available	958	Open in IMG/M
3300006028\|Ga0070717_10748366	Not Available	888	Open in IMG/M
3300006034\|Ga0066656_10272202	Not Available	1090	Open in IMG/M
3300006046\|Ga0066652_101717464	Not Available	571	Open in IMG/M
3300006175\|Ga0070712_100693586	Not Available	868	Open in IMG/M
3300006755\|Ga0079222_11939067	Not Available	576	Open in IMG/M
3300006755\|Ga0079222_12508849	Not Available	518	Open in IMG/M
3300006797\|Ga0066659_11113956	Not Available	660	Open in IMG/M
3300006800\|Ga0066660_10894897	Not Available	723	Open in IMG/M
3300006804\|Ga0079221_11737963	Not Available	509	Open in IMG/M
3300006871\|Ga0075434_100763673	Not Available	983	Open in IMG/M
3300006871\|Ga0075434_102423279	Not Available	527	Open in IMG/M
3300006904\|Ga0075424_100537603	Not Available	1248	Open in IMG/M
3300006904\|Ga0075424_101183015	Not Available	814	Open in IMG/M
3300009012\|Ga0066710_101527810	Not Available	1028	Open in IMG/M
3300009147\|Ga0114129_10862008	Not Available	1150	Open in IMG/M
3300009792\|Ga0126374_10360446	Not Available	1001	Open in IMG/M
3300009792\|Ga0126374_10795481	Not Available	722	Open in IMG/M
3300010046\|Ga0126384_10261042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1405	Open in IMG/M
3300010046\|Ga0126384_11965285	Not Available	559	Open in IMG/M
3300010046\|Ga0126384_12010326	Not Available	553	Open in IMG/M
3300010047\|Ga0126382_10450848	Not Available	1020	Open in IMG/M
3300010047\|Ga0126382_11115630	Not Available	700	Open in IMG/M
3300010048\|Ga0126373_11965810	Not Available	647	Open in IMG/M
3300010335\|Ga0134063_10129885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1158	Open in IMG/M
3300010337\|Ga0134062_10645031	Not Available	550	Open in IMG/M
3300010358\|Ga0126370_11091703	Not Available	735	Open in IMG/M
3300010358\|Ga0126370_11639781	Not Available	617	Open in IMG/M
3300010361\|Ga0126378_13124004	Not Available	527	Open in IMG/M
3300010362\|Ga0126377_10245332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1741	Open in IMG/M
3300010376\|Ga0126381_100331095	Not Available	2098	Open in IMG/M
3300012022\|Ga0120191_10028071	Not Available	856	Open in IMG/M
3300012198\|Ga0137364_10124477	Not Available	1841	Open in IMG/M
3300012199\|Ga0137383_10881625	Not Available	653	Open in IMG/M
3300012200\|Ga0137382_11004825	Not Available	599	Open in IMG/M
3300012201\|Ga0137365_10239492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1351	Open in IMG/M
3300012201\|Ga0137365_11338343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300012204\|Ga0137374_10897239	Not Available	651	Open in IMG/M
3300012204\|Ga0137374_11295471	Not Available	503	Open in IMG/M
3300012205\|Ga0137362_10646896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300012205\|Ga0137362_11647591	Not Available	528	Open in IMG/M
3300012206\|Ga0137380_10065291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3328	Open in IMG/M
3300012207\|Ga0137381_11606379	Not Available	541	Open in IMG/M
3300012208\|Ga0137376_10479695	Not Available	1079	Open in IMG/M
3300012354\|Ga0137366_10732944	Not Available	704	Open in IMG/M
3300012357\|Ga0137384_10416716	Not Available	1108	Open in IMG/M
3300012358\|Ga0137368_10878809	Not Available	548	Open in IMG/M
3300012360\|Ga0137375_10719370	Not Available	813	Open in IMG/M
3300012361\|Ga0137360_11398737	Not Available	602	Open in IMG/M
3300012362\|Ga0137361_11370846	Not Available	631	Open in IMG/M
3300012532\|Ga0137373_10627961	Not Available	807	Open in IMG/M
3300012532\|Ga0137373_11123906	Not Available	560	Open in IMG/M
3300012948\|Ga0126375_12066403	Not Available	505	Open in IMG/M
3300012958\|Ga0164299_10313501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300012960\|Ga0164301_10185829	Not Available	1310	Open in IMG/M
3300012960\|Ga0164301_10537844	Not Available	850	Open in IMG/M
3300012971\|Ga0126369_12187461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300012985\|Ga0164308_11293443	Not Available	662	Open in IMG/M
3300012989\|Ga0164305_10664569	Not Available	846	Open in IMG/M
3300015371\|Ga0132258_10185195	All Organisms → cellular organisms → Bacteria → Proteobacteria	5037	Open in IMG/M
3300015374\|Ga0132255_106088437	Not Available	510	Open in IMG/M
3300016319\|Ga0182033_10347708	Not Available	1239	Open in IMG/M
3300016357\|Ga0182032_11849680	Not Available	528	Open in IMG/M
3300017654\|Ga0134069_1260814	Not Available	605	Open in IMG/M
3300018433\|Ga0066667_11621171	Not Available	577	Open in IMG/M
3300018468\|Ga0066662_11489943	Not Available	704	Open in IMG/M
3300018468\|Ga0066662_12261528	Not Available	571	Open in IMG/M
3300020579\|Ga0210407_10678166	Not Available	800	Open in IMG/M
3300020579\|Ga0210407_10796350	Not Available	729	Open in IMG/M
3300020581\|Ga0210399_10552532	Not Available	955	Open in IMG/M
3300021168\|Ga0210406_10436096	Not Available	1045	Open in IMG/M
3300021479\|Ga0210410_10403934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300025915\|Ga0207693_10330440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1193	Open in IMG/M
3300025922\|Ga0207646_11507942	Not Available	582	Open in IMG/M
3300026304\|Ga0209240_1219191	Not Available	577	Open in IMG/M
3300026538\|Ga0209056_10724529	Not Available	504	Open in IMG/M
3300026550\|Ga0209474_10018241	All Organisms → cellular organisms → Bacteria	5470	Open in IMG/M
3300026551\|Ga0209648_10469651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300028878\|Ga0307278_10451351	Not Available	563	Open in IMG/M
3300031545\|Ga0318541_10084650	Not Available	1682	Open in IMG/M
3300031744\|Ga0306918_10283948	Not Available	1271	Open in IMG/M
3300031820\|Ga0307473_10676752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031890\|Ga0306925_10543379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	1233	Open in IMG/M
3300031947\|Ga0310909_10977969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	692	Open in IMG/M
3300032001\|Ga0306922_10240236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1946	Open in IMG/M
3300032035\|Ga0310911_10760986	Not Available	560	Open in IMG/M
3300032174\|Ga0307470_10581047	Not Available	834	Open in IMG/M
3300032180\|Ga0307471_100509618	Not Available	1352	Open in IMG/M
3300032180\|Ga0307471_103667814	Not Available	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.11%
Host-Associated	Host-Associated	7.02%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.11%
Plants	Host-Associated → Plants	7.02%
Solid Waste	Engineered → Solid Waste	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%
Grass	Engineered → Solid Waste → Grass	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.95%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.88%
Composting	Engineered → Solid Waste → Grass → Composting	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.88%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_06079011	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFRVSSDRQIEFDRSSSPAALNEGDPGRLEATEAVKEFVEQEIK*
AF_2010_repII_A01DRAFT_10132301	3300000580	Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLRHIYWFRVSPDRQIEFDRSSSPAALNEGDLGRLEATEAVKEFVEQEIQ*
AF_2010_repII_A1DRAFT_100127384	3300000597	Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLRHIYWFRVSPDRQIEFDRSSSPAALNEGDLGRLEATEAVKEF
AF_2010_repII_A100DRAFT_10074282	3300000655	Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLRHIYWFRVSPDRQIEFDRSSSPAALNEGDLGRLEATEAVKEFVKQEIQ*
JGI11643J11755_116836512	3300000787	Soil	MTCIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDQQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
AF_2010_repII_A001DRAFT_100268992	3300000793	Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFRVSPDRQIEFDRSSSPAAINEQDPGRLEATEAVKEFVEQEIK*
JGI1027J12803_1002608305	3300000955	Soil	AVVMTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
JGI1027J12803_1014917382	3300000955	Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQ*
JGI10216J12902_1129403272	3300000956	Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISLDRQVEFDRSSSPMALNEGDPGRLEATQVVNEFVEQEIR*
Ga0066688_104729752	3300005178	Soil	MTRIVKGFAVDWDDRWRRTVWAPREHIYWFNVSPDRQVEFDRSSSPIALNEGDPGRLEAMQAVKEFVEQEK*
Ga0066388_1000864164	3300005332	Tropical Forest Soil	MTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPIVLNEGDQGRLEAMQAVKEFIEQEIQ*
Ga0066388_1018278002	3300005332	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDRSSSPVALNEGDPGRLEATRAVKEFVEQEIK*
Ga0066388_1026904352	3300005332	Tropical Forest Soil	LNAGRHKRVILDRAIMTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEHEIQ*
Ga0066388_1063869821	3300005332	Tropical Forest Soil	MTRVIKGFAIGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0070714_1014817122	3300005435	Agricultural Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEAT
Ga0070698_1007225301	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRIIKGFAVDWGDRWRRTVWAQRHHIYWFNVSPDRQVEFDRSSSSTARNQADPGRLEAAQAVKEFVEQDIQ*
Ga0070697_1000912906	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0070697_1000942534	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LGDRWWRTVWAQLEYIYWFNVLPDRQIEFDRSSSSMALNEGDRGCLEAMQAVKEFVEQEIQ*
Ga0070697_1020696241	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0066697_104930132	3300005540	Soil	SSCGAVVMTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0066699_106500732	3300005561	Soil	LTHHRAVMTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0066699_110514472	3300005561	Soil	MTRIVKGFAVDWDDRWRRTVWAPREHIYWFKVSPDRQVEFDRSSSPIALNEGDPGRLEAMQAVKEFVEQEIQ*
Ga0066702_106539071	3300005575	Soil	LGDRWWRTVWAQLEYIYWFNVLPDRQIEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0066903_1009000544	3300005764	Tropical Forest Soil	MTRVIQGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMLLNEGDQGRLEATQAVKEFIEQEIQ*
Ga0066903_1013733133	3300005764	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLKHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQE
Ga0081455_103973162	3300005937	Tabebuia Heterophylla Rhizosphere	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRRVEFERGSSPMTLNEGDPGRLEATQAVKEFVEQEIQ*
Ga0070717_107483662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSTARNQADPGRLEAAQAVKEFVEQDIQ*
Ga0066656_102722022	3300006034	Soil	MTRIIKGFAVGWGDRWRRTVWAQLDHIYWFNVTPDRQVEFDRSSSPTALNEGDRGRLEAGQAVKEFVEQEIQ*
Ga0066652_1017174641	3300006046	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDGWQQRP*
Ga0070712_1006935862	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRVIKGFAVGWGDRWRRTVWAQREHIYWFNVSSDRQIQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0079222_119390671	3300006755	Agricultural Soil	IIKGFAIDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIH*
Ga0079222_125088491	3300006755	Agricultural Soil	GAVATRSSCGAVVMTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDQQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0066659_111139561	3300006797	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQTDPGRLEAAQAVKEFVEQDIQ*
Ga0066660_108948972	3300006800	Soil	MTRIVKGFAVDWDDRWRRTVWAQREHIYWFKVSPDRQVEFDRSSSPIALNEGDPGRLEAMQAVKEFVEQEIQ*
Ga0079221_117379631	3300006804	Agricultural Soil	MTRIIKGFAVDWGDRWQRTVWAQLEHIYWFHVSSDRQVEFDRSSSPVARNEGDPGRLKAAQAVREFVEQEI*
Ga0075434_1007636732	3300006871	Populus Rhizosphere	MTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0075434_1024232792	3300006871	Populus Rhizosphere	MTRIIKGFAIDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0075424_1005376032	3300006904	Populus Rhizosphere	MTRVIKGFAVGWGDRWRRTIWAQREYIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0075424_1011830153	3300006904	Populus Rhizosphere	MTRIIKGFAVDWGDRWQRTVWAQLEHIYWFHVSSDRQVEFDRSSSPVARNEGDPGRLKA
Ga0066710_1015278102	3300009012	Grasslands Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK
Ga0114129_108620082	3300009147	Populus Rhizosphere	MTGVIKGFAVGWGDRWRRTVWAQREHIYWFNISSDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0126374_103604461	3300009792	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDQQVEFDRSSSPAALNEGDPGRLEATRAVKEFVEQELK*
Ga0126374_107954811	3300009792	Tropical Forest Soil	HKRVILDRAIMTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPIVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0126384_102610421	3300010046	Tropical Forest Soil	RELALDRAIMTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPTALNEGDRGRLEATQAVKEFVEQEIQ*
Ga0126384_119652851	3300010046	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFRVSPDRQIEFDRSSSPAALNEGDPGRLEATEAVKEFVEQEIK*
Ga0126384_120103262	3300010046	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFARSSSPAALNEGDPGRLEATRAVKEFVEQEIK*
Ga0126382_104508483	3300010047	Tropical Forest Soil	ASSKAFAVDWGNRWRRTVWAQLEHIYWFNVSPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEREK*
Ga0126382_111156301	3300010047	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFRVSPDRQIEFDRSSSPAALNEQDPGRLEATEAVKEFVEQEIK*
Ga0126373_119658101	3300010048	Tropical Forest Soil	MTRIIKGFSVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPTALNEGDRGRLEATQAVKEFVEKEIQ*
Ga0134063_101298852	3300010335	Grasslands Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPTALNEGDRGRLEAGQAVKEFVEQEIQ*
Ga0134062_106450311	3300010337	Grasslands Soil	MTRIIKGLAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0126370_110917032	3300010358	Tropical Forest Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPTALNEGDRGRLEATQAVKEFVEQEIQ*
Ga0126370_116397811	3300010358	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFNVSPDRQVEFDRSSSPAALNEGDPGRLEATRAVKEFVEQEIK*
Ga0126378_131240041	3300010361	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDRSSSRAALNEGDPGRLEATRAVKEFVEQEIK*
Ga0126377_102453322	3300010362	Tropical Forest Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFHISPDRQVEFDRSSSPTALNEGDRGRLEATQAVKEFVEQEIQ*
Ga0126381_1003310953	3300010376	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLKHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0120191_100280712	3300012022	Terrestrial	MTRIIKGFAVGWGDKWRRTVWAQREHIYWFNISPDRQVEFDRGSSPMALNEGDHGRLEATQAVKEFVEQEIQ*
Ga0137364_101244771	3300012198	Vadose Zone Soil	AVMTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQ*
Ga0137383_108816251	3300012199	Vadose Zone Soil	RIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0137382_110048251	3300012200	Vadose Zone Soil	MTRIIKGFAVDWGDRWQRTVWAQLEHIYWFHVSSDRQVEFDRSSSPVARNEGDPGRLKATQAVKEFVEQEIK*
Ga0137365_102394922	3300012201	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVTPDRQVEFDRSSSPTALNEGDRGRLEAAQAVKEFLEQEIQ*
Ga0137365_113383432	3300012201	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDRSSSPVARNEGDPGRLEATQAVKEFVEQEI
Ga0137374_108972391	3300012204	Vadose Zone Soil	RSSCGAVVTTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0137374_112954712	3300012204	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDHSSSPIALNEADPARLEATQAVKEFVEQEIQ*
Ga0137362_106468962	3300012205	Vadose Zone Soil	VDWGDRWRRTVWAQRDHIYWFNVSPDRHVEFDRSSSSTAHNQADPGRLEAAQAVKEFVGQDIQ*
Ga0137362_116475911	3300012205	Vadose Zone Soil	AVMTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVTPDRQVEFDRSSSPTALNEGDRGRLEAAQAVKEFLEQEIQ*
Ga0137380_100652911	3300012206	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0137381_116063791	3300012207	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQ*
Ga0137376_104796952	3300012208	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVNEFVQQENQ*
Ga0137366_107329441	3300012354	Vadose Zone Soil	MTRIIKGLAVDWGDRWRRTVWAQLDHIYWFNVTPDRQVEFDRSSSPTALNEGDRGRLGAAQAVKEFLEQEIQ*
Ga0137384_104167162	3300012357	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVWAQREHIYWFNVSPDRQVEFDRSSSSMAHNQADPSRLEAAQAVKEFVEQDIQ*
Ga0137368_108788091	3300012358	Vadose Zone Soil	QAHLAKLASQGIDKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDHSSSPIALNEADPARLEATQAVKEFVEQEIQ*
Ga0137375_107193701	3300012360	Vadose Zone Soil	SIMTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDHSSSPIALNEADPARLEATQAVKEFVEQEIQ*
Ga0137360_113987372	3300012361	Vadose Zone Soil	MTRIIKGFAVDWGAVWAQRHHIYWFNVSPDRQVEFDRSSSSTAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0137361_113708461	3300012362	Vadose Zone Soil	MTRIIKGFAVGWGDRWRRTLWAQLDHIYWFNVSPDRQVKFDRNSSPTALNEGDCGRLEAGQAAKEFGEQEIQ*
Ga0137373_106279611	3300012532	Vadose Zone Soil	GFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDHSSSPIALNEADPARLEATQAVKEFVEQEIQ*
Ga0137373_111239061	3300012532	Vadose Zone Soil	MTRIIKGFAVDWGDRWRRTVCAQLEHIYWFNVSPDRQVEFDRSSSPVALNEGDPGRLEATRAVKEFVEQEIK*
Ga0126375_120664031	3300012948	Tropical Forest Soil	VDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK*
Ga0164299_103135012	3300012958	Soil	MTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIE*
Ga0164301_101858292	3300012960	Soil	IKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0164301_105378442	3300012960	Soil	DWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0126369_121874611	3300012971	Tropical Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLQHIYWFNVSPDRQVEFDRSSSPAALNEGDPGRLEATRAVKEFVEQELK*
Ga0164308_112934431	3300012985	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVAPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0164305_106645691	3300012989	Soil	DRAVMTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ*
Ga0132258_1018519511	3300015371	Arabidopsis Rhizosphere	MTRVIKGFAVGWGDRWRRTVWEQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0132255_1060884371	3300015374	Arabidopsis Rhizosphere	ITPVHPKGCSPLDRAIMTRVIKGFAVGWGDRWRRTIWAQREYIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ*
Ga0182033_103477083	3300016319	Soil	RELALDRAIMTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPAALNEGDRGRLEETQAVKEFVEQEIQ
Ga0182032_118496802	3300016357	Soil	MTLIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKFVEQDIQ
Ga0134069_12608141	3300017654	Grasslands Soil	RAIMTRIVKGFAVDWDDRWRRTVWAQREHIYWFKVSPDRQVEFDRSSSPIALNEGDPGRLEAMQAVKEFVEQEK
Ga0066667_116211711	3300018433	Grasslands Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDI
Ga0066662_114899432	3300018468	Grasslands Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQDIQ
Ga0066662_122615281	3300018468	Grasslands Soil	VLRLIGGSGRRTVWAQLEHIYWFNVLPDRQVEFDRGSSPAALPEGDLGRVEATQAVKEFVEQEK
Ga0210407_106781662	3300020579	Soil	ILDRVIMTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ
Ga0210407_107963502	3300020579	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVK
Ga0210399_105525321	3300020581	Soil	MTRVIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIE
Ga0210406_104360962	3300021168	Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRGSSPMALNEGDRGRLEATQAVKEFVQQEIQ
Ga0210410_104039342	3300021479	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKEFVEQGIQ
Ga0207693_103304401	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDQQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK
Ga0207646_115079421	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SCGAVVMTCIIKGFAVDWGDRWRRTVWAQLEHIYWFNVLPDRQVEFDRSSSPAALTEGDPGRVEATQAVKEFVEQEK
Ga0209240_12191911	3300026304	Grasslands Soil	MTRIIKGFAVDWGDRWRRTVWAQLEHIYWFNVSPDRQVEFDRSSSPVALNEGDPGRLEATRAVKEFVEQEIK
Ga0209056_107245292	3300026538	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPSRLEAAQAVKEFVEQDIQ
Ga0209474_100182412	3300026550	Soil	MTRIVKGFAVDWDDRWRRTVWAQREHIYWFKVSPDRQVEFDRSSSPIALNEGDPGRLEAMQAVKEFVEQEIQ
Ga0209648_104696512	3300026551	Grasslands Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPTALNEGDRGRLEATQAVKEFVEQEIQ
Ga0307278_104513511	3300028878	Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQ
Ga0318541_100846503	3300031545	Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPAALNEGDRGRLEETQAVKEFVEQEIQ
Ga0306918_102839481	3300031744	Soil	TLGGIRELALDRAIMTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPAALNEGDRGRLEETQAVKEFVEQEIQ
Ga0307473_106767521	3300031820	Hardwood Forest Soil	TRVIKGFSVGWADRWRRTVWAQREHIYWFNISPDRQVQFERSSSPMVLNEGDHGRLEATQAVKEFIEQEIQ
Ga0306925_105433793	3300031890	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHQADPGRLEAAQAVKEFVEQDIQ
Ga0310909_109779692	3300031947	Soil	MTRIIKGFAVDWGDRWRRTVWAQRDHIYWFNVSPDRQVEFDRSSSSMAHNQADPGRLEAAQAVKFVEQDIQ
Ga0306922_102402364	3300032001	Soil	MTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPAALNEGDRGRLEETQAV
Ga0310911_107609861	3300032035	Soil	DRAIMTRIIKGFAVGWGDRWRRTVWAQREHIYWFNISPDRQVEFDRSSSPAALNEGDRGRLEETQAVKEFVEQEIQ
Ga0307470_105810471	3300032174	Hardwood Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRGSSPMALNEGDRGRLDATQDVKEFVQKEIQ
Ga0307471_1005096182	3300032180	Hardwood Forest Soil	MTRIIKGFAVDWGDRWRRTVWAQLDHIYWFNVSPDRQVEFDRSSSPMALNEGDRGRLEATQAVKEFVQQEIQQAVGDSISRAVHGR
Ga0307471_1036678141	3300032180	Hardwood Forest Soil	MTRIIKGFVVDWGDRWRRTVWAQLDHIYWFNVFPDRQVEFDHGSSPTALNEGDPGRLAATQAVKEFVQQEIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081611

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences