Metagenome / Metatranscriptome Family F081655

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081655
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	60 residues
Representative Sequence	MGVTIELQNLGDAELCREIVARIEHALSARSGEWRVSIAGSRASENWEMRVEGPNSFER
Number of Associated Samples	94
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.73 %
% of genes near scaffold ends (potentially truncated)	88.60 %
% of genes from short scaffolds (< 2000 bps)	85.09 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.544 % of family members)
Environment Ontology (ENVO)	Unclassified (26.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.99% β-sheet: 24.14% Coil/Unstructured: 52.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01844	HNH	4.39
PF04295	GD_AH_C	4.39
PF02586	SRAP	1.75
PF13852	DUF4197	1.75
PF01420	Methylase_S	0.88
PF06508	QueC	0.88
PF13493	DUF4118	0.88
PF13011	LZ_Tnp_IS481	0.88
PF02397	Bac_transf	0.88
PF07978	NIPSNAP	0.88
PF02566	OsmC	0.88
PF02954	HTH_8	0.88
PF01850	PIN	0.88
PF08448	PAS_4	0.88
PF00075	RNase_H	0.88
PF00753	Lactamase_B	0.88
PF02518	HATPase_c	0.88
PF01266	DAO	0.88
PF14310	Fn3-like	0.88
PF01527	HTH_Tnp_1	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	4.39
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.75
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.88
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.88
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.88
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.88
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.88
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.88
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.88
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.88
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.88
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.88
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.21 %
Unclassified	root	N/A	7.02 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.79 %
Unclassified	root	N/A	7.02 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.79 %
Unclassified	root	N/A	7.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.79 %
Unclassified	root	N/A	7.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.75 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.79 %
Unclassified	root	N/A	7.02 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.88 %
Phycisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae	0.88 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.79 %
Unclassified	root	N/A	7.02 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.88 %
Mucisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → Mucisphaera	0.88 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.79 %
Unclassified	root	N/A	7.02 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Mucisphaera calidilacus	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → Mucisphaera → Mucisphaera calidilacus	0.88 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.88 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090003\|LJN_F7QKVOU01DNOJA	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300001180\|JGI12695J13573_1004204	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300003505\|JGIcombinedJ51221_10187362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300003505\|JGIcombinedJ51221_10386693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005435\|Ga0070714_100138944	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300005436\|Ga0070713_100598275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300005437\|Ga0070710_10256735	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005447\|Ga0066689_11031369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005468\|Ga0070707_102028936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005518\|Ga0070699_101634800	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300005532\|Ga0070739_10204885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300005542\|Ga0070732_10807928	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300005566\|Ga0066693_10033031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1649	Open in IMG/M
3300005568\|Ga0066703_10109222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1634	Open in IMG/M
3300005568\|Ga0066703_10786067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005575\|Ga0066702_10087563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1754	Open in IMG/M
3300006028\|Ga0070717_11608830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006052\|Ga0075029_100333190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300006173\|Ga0070716_101567344	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300006175\|Ga0070712_100055162	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	2782	Open in IMG/M
3300007255\|Ga0099791_10157873	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300009038\|Ga0099829_11535124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009759\|Ga0116101_1064479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300009839\|Ga0116223_10342197	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → Mucisphaera → Mucisphaera calidilacus	887	Open in IMG/M
3300010048\|Ga0126373_10111182	All Organisms → cellular organisms → Bacteria → Acidobacteria	2549	Open in IMG/M
3300010303\|Ga0134082_10525614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010360\|Ga0126372_10843103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300010366\|Ga0126379_13192917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010373\|Ga0134128_12864244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010376\|Ga0126381_104526697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300011271\|Ga0137393_11266626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012201\|Ga0137365_10684508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300012202\|Ga0137363_11532725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012206\|Ga0137380_10093432	All Organisms → cellular organisms → Bacteria → Acidobacteria	2749	Open in IMG/M
3300012210\|Ga0137378_11158035	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300012210\|Ga0137378_11616599	Not Available	556	Open in IMG/M
3300012285\|Ga0137370_10856629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012349\|Ga0137387_10058088	All Organisms → cellular organisms → Bacteria → Acidobacteria	2602	Open in IMG/M
3300012351\|Ga0137386_11289229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012351\|Ga0137386_11296908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012354\|Ga0137366_10541703	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012354\|Ga0137366_10779277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012354\|Ga0137366_11095526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012357\|Ga0137384_10322604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300012357\|Ga0137384_11530909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012359\|Ga0137385_10382291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300012917\|Ga0137395_11212042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012925\|Ga0137419_10753659	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300012971\|Ga0126369_13382945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300013100\|Ga0157373_11513886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300013104\|Ga0157370_11746536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300013296\|Ga0157374_12551807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300016270\|Ga0182036_10583494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300016341\|Ga0182035_10747046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300017823\|Ga0187818_10511665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017955\|Ga0187817_10902709	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300018017\|Ga0187872_10295705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300018022\|Ga0187864_10090953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300018038\|Ga0187855_10114267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300018057\|Ga0187858_10680730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300018088\|Ga0187771_10039508	All Organisms → cellular organisms → Bacteria → Acidobacteria	3632	Open in IMG/M
3300018088\|Ga0187771_11738386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300020580\|Ga0210403_10055032	All Organisms → cellular organisms → Bacteria	3183	Open in IMG/M
3300020580\|Ga0210403_10441651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1060	Open in IMG/M
3300020583\|Ga0210401_10136901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2292	Open in IMG/M
3300021171\|Ga0210405_10317762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300021180\|Ga0210396_10245871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1591	Open in IMG/M
3300021181\|Ga0210388_11587222	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300021401\|Ga0210393_11004483	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300021432\|Ga0210384_10206505	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300021560\|Ga0126371_12642053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300021560\|Ga0126371_12984121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300022722\|Ga0242657_1261223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300022726\|Ga0242654_10279654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300022726\|Ga0242654_10349938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025906\|Ga0207699_10207060	Not Available	1332	Open in IMG/M
3300025913\|Ga0207695_10003610	All Organisms → cellular organisms → Bacteria → Acidobacteria	21641	Open in IMG/M
3300025915\|Ga0207693_10488458	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300025929\|Ga0207664_11686604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025929\|Ga0207664_11828351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300025939\|Ga0207665_10487608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300026333\|Ga0209158_1109888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300026524\|Ga0209690_1182094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300026548\|Ga0209161_10026464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4074	Open in IMG/M
3300026551\|Ga0209648_10595160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300026984\|Ga0208732_1010446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300026999\|Ga0207949_1028390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300027073\|Ga0208366_1023539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027545\|Ga0209008_1098605	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300027773\|Ga0209810_1353487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027842\|Ga0209580_10028971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2507	Open in IMG/M
3300027842\|Ga0209580_10510680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031057\|Ga0170834_104678481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300031234\|Ga0302325_12014453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300031708\|Ga0310686_115736118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300031715\|Ga0307476_10018952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4440	Open in IMG/M
3300031715\|Ga0307476_11179333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031718\|Ga0307474_11249182	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300031753\|Ga0307477_10212231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300031754\|Ga0307475_10174653	Not Available	1713	Open in IMG/M
3300031754\|Ga0307475_10624808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300031754\|Ga0307475_10668417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300031754\|Ga0307475_11497649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300031946\|Ga0310910_11215689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300031962\|Ga0307479_11584073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300032180\|Ga0307471_100132676	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	2351	Open in IMG/M
3300032180\|Ga0307471_103855053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300032205\|Ga0307472_102395761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300032783\|Ga0335079_12344638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032898\|Ga0335072_10984924	Not Available	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.61%
Host-Associated	Host-Associated	4.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.60%
Aquatic	Environmental → Aquatic	7.02%
Plants	Host-Associated → Plants	4.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.84%
Freshwater	Environmental → Aquatic → Freshwater	6.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.51%
Peat	Environmental → Terrestrial → Peat	1.75%
Sediment	Environmental → Aquatic → Sediment	0.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.16%
Loam	Environmental → Terrestrial → Soil → Loam	18.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.51%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090003	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN	Host-Associated	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJN_02282320	2088090003	Quercus Rhizosphere	MGVTIELQNLGDAQLEHALSGRQGEWRVSIAGSRAAENWDLRVDGPNGFERSYALGCRR
JGI12695J13573_10042041	3300001180	Forest Soil	MGVTIELQNLGDAQLCRDITAHPEHAFSDRQGEWRVSIAGSRVAESWDLRVEGPNGFERSYALSADAGEH
JGIcombinedJ51221_101873621	3300003505	Forest Soil	MGVTVELENLGDAQLCREIVARVEHAFSDKKGEWRVSIAGSRESESWEMRVAGPSG
JGIcombinedJ51221_103866932	3300003505	Forest Soil	MGVSIELQNLGDAQLCREITAQVEHALSDRQGAWRVSIAASRASENWEMRVEGPHGFERSYSLADSA
Ga0070714_1001389441	3300005435	Agricultural Soil	MQCMAVTIELQNLGDVQLSRDITAHIEHALAGRGGDWRVSIAGSRASENWEMRV
Ga0070714_1024966281	3300005435	Agricultural Soil	MGVSIELQNLGDAQLCREITAQVEHALSDRQGAWRVSIAASRA
Ga0070713_1005982752	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTAELENLGDARLSKEIAASIEHALGERRGDWRVTIAGSRASENWEMRVEGPNGFERTYTLAGAA
Ga0070710_102567351	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTIELQNLSDAELCREITAHVEHAFSDRQGNWRVSITGSRAAESWD
Ga0066689_110313692	3300005447	Soil	MGVTIELQNLGDAELCREIAVGIEHALSDKTGEWRVSVVGSRETENWDMRIEGPNGFERSYTLSRAAG
Ga0070707_1020289361	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTIELQNLGDAELCREIVARIEHALSARSRDWRVSIAGSRASENWEMRIE
Ga0070699_1016348002	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTVELQNLGDAQLCRDITAHLEHAFSGQEGEWRVSISGSRAAQNWDLRVEGPNGFERSYALSADAGEH
Ga0070739_102048852	3300005532	Surface Soil	MGVTIELQNLGDAELCREITAQVEHAFSDRQGNWRVSITGSRAVESWDMRVEGPNGFERS
Ga0070732_108079282	3300005542	Surface Soil	MGVTIELQNLGDAQLCRDITAHLEHVFSGRQGEWRVSIAGSRATESWDLRVDG
Ga0066693_100330314	3300005566	Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKTGDWRVSIAGSRATENWDTRVEGPNGFERSYTL
Ga0066703_101092221	3300005568	Soil	MGVTVELQNLGDAQLCRDITTQLEHAFSGRLGGWRVSITGSRAAENWELKVEGPNGFERS
Ga0066703_107860671	3300005568	Soil	MGVTIELQNLGDAERCREIAVGIEHALSEKVGEWRVSVAGSRETENWDMRVEGPNGFERTYTLSGAAGQH
Ga0066702_100875631	3300005575	Soil	VTIELQNLGDAQLCREITACIEHAFADRRGDWRMSIAGSRASQNWEMRVEGQNAF
Ga0070717_116088301	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPVAIELHNLGDAQLCREIVASIEHALSDKRGEWCVSIAGSRASENWELRVEGVNGFERTYTLAGAAG
Ga0075029_1003331901	3300006052	Watersheds	MAVTIELQNLGDAQLCRDITAYLEHAFRSRQGEWCVSIAGSRAAESWDLRLEGPNG
Ga0070716_1015673442	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTIELQNLGDAQLCRDITAHLEHAFSGRPGDWSVSIAGSRAAENWELKVEGPNGFER
Ga0070712_1000551625	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSIELQNLGDAQLCREITAQVEHTLSDRQGAWRVSIAASRASENWEMRIEGPHGFERSYSLA
Ga0099791_101578731	3300007255	Vadose Zone Soil	MGVTIELQNLGDAQLCRDITAHLEHAFSGRQGEWRVSIAGSRVAESWDLRVEGPNGFERSYA
Ga0099829_115351241	3300009038	Vadose Zone Soil	MGVTIELQNLGDAELCREIVARIEHALSARSGEWRVSIAGSRASENWEMRVEGPNSFER
Ga0116101_10644791	3300009759	Peatland	MGVTIELQNLGDAELCREITAHVEHAFSDRQGIWRVSITGSRAAESWDMRVEGPNGFERSYS
Ga0116223_103421972	3300009839	Peatlands Soil	MPVAIELQNLGDAQLCREIAASIEHALGDKRGEWRVSIAGSRASENWELRVEGLNGFERTYTLAGATGSINLR*
Ga0126373_101111822	3300010048	Tropical Forest Soil	MAVPIELPNLEDAQLCQEIVARIEHTLSDKRGEWRVSIAASQNWEMQVEGPNVSERTYILVGRCRRART*
Ga0134082_105256141	3300010303	Grasslands Soil	MGVTIELQNLGDAELCREIAVGIEHALSDKTGEWRVSVVGSRETENWDMRIEGPNGFERS
Ga0126372_108431032	3300010360	Tropical Forest Soil	MGITIELQNLGDAELCREITVQLEHAFSGRQGAWRVSISGSRAADNWDLR
Ga0126379_131929171	3300010366	Tropical Forest Soil	MGITIALQNLGGAQLWREITVQLGQAFGDRQGAWRVSIGGSRASDNWDLRVEGPNGFERS
Ga0134128_128642441	3300010373	Terrestrial Soil	MGVSIELQNLGDARVSREIVASIEHALNDKSGQWRVSIAGSIASENWEMRVEGPNGFERSYTL
Ga0126381_1045266972	3300010376	Tropical Forest Soil	MGVRVELQNLGDAQLSKEISARIEHALSEQRGEWRVSISGSRESENWDMRVEGPNGFERSYSLASSS
Ga0137393_112666261	3300011271	Vadose Zone Soil	MPVAIELQNLGDAQLCREIVASIEHALSDKGGEWRVSIAGSRASENWEMRVEGLNGF
Ga0137365_106845081	3300012201	Vadose Zone Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKTGEWRVSIAGSRETENWDMRVEGPNGFERTYTLSGAAGQH
Ga0137363_115327251	3300012202	Vadose Zone Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKTGEWRVSIAGSRATENWDMRVEGPNGFERSYTLSGAAGQH
Ga0137380_100934324	3300012206	Vadose Zone Soil	MGVTIELQNLGAELCREIAVGIEHALSEKTGEWRVSIAGSRETENW
Ga0137378_111580351	3300012210	Vadose Zone Soil	MGVSIELQNLGDAQLCRDITAHLEHAFSGRQGGWRVSIAGSRVAESWDLRVEGPHGFERSYALS
Ga0137378_116165991	3300012210	Vadose Zone Soil	MGVSIELQNLGDAQLCREITAQVEHALSDRQGAWRVSIAASRASENWEM
Ga0137370_108566292	3300012285	Vadose Zone Soil	MGVTIELQNLGDAQLCREIIANVEHALSDKRGEWRVFIAGSRASENWEMRVEGPNSFERTYTFGGAAGEH
Ga0137387_100580884	3300012349	Vadose Zone Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKTGEWRVSIAGSRETENWDMRV
Ga0137386_112892291	3300012351	Vadose Zone Soil	MGVTIELQNLGDAQLSREIVANIEHALSDQPGEWRVSVAGSRANENWGMRIEGSNSFER
Ga0137386_112969081	3300012351	Vadose Zone Soil	MGVTVELQNLGDAQLSREIVAIIEHALSDKPGEWRVSIAGSHASENWEMRVEGPSGFER
Ga0137366_105417032	3300012354	Vadose Zone Soil	MPVTIDLQNLGDVQLCREIIAGIEHALSEKHGEWRVSIAGSRASENWEVRVEGPNGFERIYLFWVLWES
Ga0137366_107792771	3300012354	Vadose Zone Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKTGEWRVSIAGSRETENWDMRVEGPNGFERSYT
Ga0137366_110955261	3300012354	Vadose Zone Soil	MGVTIELQNLGDAELCREIAVGIEHALSEKAGEWRVSIAGSRETENWDMRVEGPNGFERSYTLSGAAGQHG
Ga0137384_103226044	3300012357	Vadose Zone Soil	MGVTIELQNLGDAQLCREIAVGIEHALSEKTGDWRVSIAGSRATENWDMRVEGPNGFE
Ga0137384_115309091	3300012357	Vadose Zone Soil	MGVTIELQNLGDAQLYRDMTAYLDHAFSGRQGEWRVSIAGSRAAESWDLRVEGPKGFERSYTLSNAAGEH
Ga0137385_103822911	3300012359	Vadose Zone Soil	MGVTIELQNLGDAQLCREIIANVEHALSDKRGEWRVFIAGSRASENWEMRVEGPNSFER
Ga0137395_112120422	3300012917	Vadose Zone Soil	MGVTIELQNLGDARLSREIVVSIEHALSDKPGEWRVSVAGSRANENWEMRIE
Ga0137419_107536591	3300012925	Vadose Zone Soil	MGVTIELQNLGDAQVCRDITAHLDHAFTGRQGEWRVSIAGSRVAESWDLQVEGPNGFERSYALSADAANTSLRADPHTC
Ga0126369_133829452	3300012971	Tropical Forest Soil	MGVTIELQNLGDAELCREISVQLEHVFSGRQGAWRVSINGSRAADNWDLRVEGPNGLERSYGLS
Ga0157373_115138861	3300013100	Corn Rhizosphere	MGVIIELQNLGDADLSRELGASIEHALSERPGEWRVSITGSCASETWEMRVKGRNGFERSYTLA
Ga0157370_117465361	3300013104	Corn Rhizosphere	MGVTVELQNIRDAHISREIAASIEHALSEKPGEWHVSVAGSRANENWEMRVGGPNGFER
Ga0157374_125518072	3300013296	Miscanthus Rhizosphere	MGVTVELQNIRDAHISREIAASIEHALSEKPGEWHVSVAGSRANENWEMRVGGPNGFERSYTLAS
Ga0182036_105834941	3300016270	Soil	MGITIELQNLGDAQLCREITAHVEHAFSDRKGDWRVSIAGSRASENWEMRVEGPNGFERSYSLSGVAG
Ga0182035_107470462	3300016341	Soil	MGVRTELQNLGDAELCREITAHLEHAFSGRQGEWCVSISGSRAAENWDLRVEGPHGFERSYTLSAAAGEHE
Ga0187818_105116652	3300017823	Freshwater Sediment	MSVTTELQNLGDARLCGEIVASIEHALCERRGEWRVSIAGSHGSENWEMRVEGP
Ga0187817_109027091	3300017955	Freshwater Sediment	MPVAIELHNLGDAQLCREIVASIEHALGDKRGEWRVSIAGSRASENWEMRVEGLNGFERTYTLAG
Ga0187872_102957051	3300018017	Peatland	MPVAIELHNLGDAQLCREIVASIEHALSDKRGEWRVSIAGSRASENWEMR
Ga0187864_100909532	3300018022	Peatland	MPVAIELHNLGDAQLCREIVASIEHALSDKRGEWRVSIAGSRASENWEMRVEGLNGF
Ga0187855_101142671	3300018038	Peatland	MGVTIELQNLGDAELCREITAHVEHAFSDRQGIWRVSITGSRAAESWDMRVEGPNGFERSYSLS
Ga0187858_106807301	3300018057	Peatland	MGVTIELQNLGDAELCREITAHVEHAFSDRQGIWRVSITGSRAAESWDMRVEGPNGFERSYSLSGAAGE
Ga0187771_100395083	3300018088	Tropical Peatland	MGVTVELHNLGDPQLCREIVARIEQALSDRRGEWRVSIAGSRARENWEMRAEGQMALNGRIV
Ga0187771_117383861	3300018088	Tropical Peatland	MMGVTVELHNLGDPQLCREIVARIEHAFSDRRGEWRVSIAGSRASENWEM
Ga0210403_100550321	3300020580	Soil	MGVTIELQSLGDAQLCRDITAQLEHAFSGRQGEWRVSIAGSRVAENWHLRVEGPI
Ga0210403_104416511	3300020580	Soil	MAVTIELWNLGDAQLCREITEQVEHAFSDRQGPWRVSIAGSRTTENWDMRMEGPHGFERSYSL
Ga0210401_101369011	3300020583	Soil	MPVTTDLQNLGDAQLCREIVAGIEHLLGEKRGAWRVSIAGSRASENWEMRIEGPNGFERT
Ga0210405_103177622	3300021171	Soil	VTIDLQNLGNAQEITAHIEHIFADRRGDWRVSIAGTRATENWEMRVEGPNGFERSYVLTASAGEHSPEA
Ga0210396_102458713	3300021180	Soil	MGVTIELQNLGDAQLCRDITAHLEHAFSRRLGEWRVSIAGSRAAENWELKVEGPNGFERSYMLSAAPGE
Ga0210388_115872221	3300021181	Soil	MGVTIELQSLGDAQLCRDITAQLEHAFSGRQGEWRVSIAGSRVAENWHLRVE
Ga0210393_110044831	3300021401	Soil	MGVTIELQNLGDAQLCRDITAHLEHAFSGRQGEWCVSIAGSRVAESWELRVEG
Ga0210384_102065053	3300021432	Soil	MGITIELQNLGDAQLCRQITVHLEHAFRGRQGAWRVSISGSRAADSWELQVEGPNVFER
Ga0126371_126420532	3300021560	Tropical Forest Soil	MGVTIELQNLGDAQLCREITTHVEHAFSDRQGNWHFSIAGSRGSESWEMRIEGPN
Ga0126371_129841211	3300021560	Tropical Forest Soil	MGVTVELQNLGDPQLCQEIVARVEHALSDKPGEWRVSIAGSHGSESWEMNIEGPSG
Ga0242657_12612231	3300022722	Soil	MPVAIELQNLGDAQLCREIVASIEHALRDKRGEWRVSIAGSRASENWELRVEGLNGFERTYTLAGV
Ga0242654_102796541	3300022726	Soil	MGVRIELQNLGDARLWREITAHVEHAFSDRQGDWRVSIAGSRASENWEMRVEGPA
Ga0242654_103499382	3300022726	Soil	TIDLQNLGDAEACKEITVGIEHALSEKTGDWRVSIAGSHASESWEMRVEGPNGFERSYTLPGAAGQHVP
Ga0207699_102070601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGVSIELQNLGDAQLCREITAQVEHALSDRQGAWRVSIAASRASENWEMRIEGPHGFERSYSLAA
Ga0207695_100036101	3300025913	Corn Rhizosphere	MGVTIELQNIRDSHISREIVASIEHALSDKPGEWHVSIAGSRANENWEVRIGGPNGFE
Ga0207693_104884583	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGVTVELQNLGDAQLCSDITAHLEHAFADRQGEWRVSIAGSRLAESWDLRVEGPNGFERSYT
Ga0207664_116866041	3300025929	Agricultural Soil	MGVSIELQNLGDARVSREIVASIEHALSEKSGEWRVSIAGSIASENWEMKVEGPNGFERSYTL
Ga0207664_118283511	3300025929	Agricultural Soil	MAVSIELQNLGDAQLCREITAQVEHTLSDRQGAWRVSIAASRASENWEMRIEGPHGFERSYSLAASA
Ga0207665_104876082	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGITIELQNLGDAQLCRQITVHLEHAFSGRQGAWRVSISGSRAADSWELRVEG
Ga0209158_11098881	3300026333	Soil	MGVTIEMQNLGDAELCREIAVGIEHALSEKTGEWRVSIVGSRANDNWEMKVDGPEGFER
Ga0209690_11820941	3300026524	Soil	MGVTIELQNLGDAELCREIAVGIEHALSDKTGEWRVSVVGSRETENWDMRIEGPN
Ga0209161_100264645	3300026548	Soil	MGVTIELQNLGDAELCRGIVARVEHALSARSGDWRVSIAGSRASEHWEMRVEGPNSFERSYTLAGTA
Ga0209648_105951601	3300026551	Grasslands Soil	MPVAIELHNLGDAQLCREIVASIEHALGDKRGEWRVSIAGSRASENWELR
Ga0208732_10104461	3300026984	Forest Soil	MGVTVELENLGDAQLCREIVARVEHAFSDKKGEWRVSIAGSRESESWEM
Ga0207949_10283902	3300026999	Forest Soil	MGITIELQNLGDAQLCRQITVHLEHAFSGRQGAWRVSISGSRAADSWELRVEGPNV
Ga0208366_10235391	3300027073	Forest Soil	MGVTIELENLGDVQLSKEITACIEHALSDRRGEWRVSIAGSRASENWELRVQGPNGFERAYTLA
Ga0209008_10986051	3300027545	Forest Soil	MGVTIELQNLGDAQLCRDITAHLEHAFADRQGEWRVSIAGSRVAESWDLRVDG
Ga0209810_13534871	3300027773	Surface Soil	MGVTIELQNLGDAELCREITAQVEHAFSDRQGNWRVSITGSRAVESWDMRVEGPN
Ga0209580_100289714	3300027842	Surface Soil	MGVTIELENLGDVQLSKEITACIGHALTDRRGEWRVSIAGSRASENWELRVQGPNGFERAYTLAGSDGE
Ga0209580_105106802	3300027842	Surface Soil	MGVTAELENLGDARLSKEIAASIEHALTDKRGDWRVTIAGSRASENWEMRVEGPNGFERTYTLAGAAGE
Ga0170834_1046784811	3300031057	Forest Soil	MGVTVELQNLGDTQLCREIVAHTEHALSDKPGEWRVSIAGSHAGENWEKKQERNKCLG
Ga0302325_120144531	3300031234	Palsa	MAVTIELQNLGDPHLCSEVTARIEHSFADRRGEWRVSVAGSRASENWDLKVEGPNGFER
Ga0302324_1005152723	3300031236	Palsa	MAVTIELQNLGDPHLCSEVTARIEHSFADRRGEWRVSVAGSRASENWDLK
Ga0310686_1157361181	3300031708	Soil	MPVAIELQNLGDAQLCREIVASIEHALRDKRGEWRVSIAGSRASENWELRVEGLNG
Ga0307476_100189525	3300031715	Hardwood Forest Soil	MGVTIEVQNLGDAQLCRDITAHIEHAFADRRGDWRVSIAGSRATENWEMRVEGPNASDEKWRLCSRN
Ga0307476_111793332	3300031715	Hardwood Forest Soil	MGVTAELENLGDARRSKEITASIEHALSDKGGDWRVTIAGSRASENWEMRVEGPNGFERTYILAGAAGEH
Ga0307474_112491821	3300031718	Hardwood Forest Soil	MGVTIELQNLGDAQLCRDITAHLEHAFSGRQGEWRVSIAGSRVAENWDLRVEGPNGFERSYTLSAA
Ga0307477_102122311	3300031753	Hardwood Forest Soil	MPVAIELQNLGDAQLCREIVASIEHALSDKRGDWRVLIAGSRASENWELRVEGLNGFERTYTLAGAAGGAST
Ga0307475_101746534	3300031754	Hardwood Forest Soil	MGVSIELQNLGDAQLCREITAQVEHALSNRQGAWRVSIAASRASENWEMRIEGP
Ga0307475_106248081	3300031754	Hardwood Forest Soil	MGVTTELQNLGDAQLCREITAHLEHAFSGRQGEWRVSISGSRTADNWDLRVEGPHGFERSYTL
Ga0307475_106684171	3300031754	Hardwood Forest Soil	MGITIEPQNLGDAQLCRDITAYLEHAFSRQQGEWRVSIAGSRAAENWDLRLEGPDGFER
Ga0307475_114976491	3300031754	Hardwood Forest Soil	MEVGIELQNLGDAQLCREITAHVKHAFSVRQGNWRVSIAGSRASENWEMR
Ga0310910_112156891	3300031946	Soil	MGVTIELQNLGDAQLCREITAHVEHAFSDRKGDWRVSIAGSRASENWEMRIEGPNGFERSYSLSAAA
Ga0307479_115840731	3300031962	Hardwood Forest Soil	MGVTVELHNLGDPQLCRDIVARIEHALSDKPGEWRVSIAGSHGSENWEMTVEG
Ga0307471_1001326764	3300032180	Hardwood Forest Soil	MGVSIELQNLGDAQLCREITAQVEHALSDRQGAWRVSIAASRASENWEMRIEGPHGFER
Ga0307471_1038550531	3300032180	Hardwood Forest Soil	MGVTAELENLGDARLSKQIAASIEHALTDKRGDWRVTIAGSRASENWEMRIEGPHGFER
Ga0307472_1023957611	3300032205	Hardwood Forest Soil	MGVTAELENLGDARLSKEIAASIEHALTDKRGDWRVTIAGSRASENWEMRIE
Ga0335079_116932011	3300032783	Soil	MPVAIELQNLGDAQLCREIVASIEHALGDKRGEWRVSIAGSRAS
Ga0335079_123446382	3300032783	Soil	MAVIIELQNLGDAQLCRDITAHLEHALCERKGDWHVSITGSRAAENWDLLVQGPNAF
Ga0335075_106263361	3300032896	Soil	MPVAIELQNLGDAQLCREIVASIEHALGDRRGEWRVSIAGS
Ga0335072_109849242	3300032898	Soil	MPVAIELQYLGDPQLSREIAASIEHALGDKRGEWRVSISGSRASENWELRVEGLNGFERTYTLAGAAGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences