Metagenome / Metatranscriptome Family F081821

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F081821
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	77 residues
Representative Sequence	MLIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGA
Number of Associated Samples	98
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.32 %
% of genes near scaffold ends (potentially truncated)	43.86 %
% of genes from short scaffolds (< 2000 bps)	85.09 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.228 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.421 % of family members)
Environment Ontology (ENVO)	Unclassified (26.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.14% β-sheet: 0.00% Coil/Unstructured: 56.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF08448	PAS_4	4.39
PF04828	GFA	4.39
PF13426	PAS_9	3.51
PF13188	PAS_8	3.51
PF02666	PS_Dcarbxylase	2.63
PF13581	HATPase_c_2	2.63
PF13545	HTH_Crp_2	1.75
PF00989	PAS	0.88
PF07729	FCD	0.88
PF07568	HisKA_2	0.88
PF04392	ABC_sub_bind	0.88
PF00873	ACR_tran	0.88
PF12071	DUF3551	0.88
PF01566	Nramp	0.88
PF08592	Anthrone_oxy	0.88
PF02518	HATPase_c	0.88
PF12840	HTH_20	0.88
PF00009	GTP_EFTU	0.88
PF06472	ABC_membrane_2	0.88
PF13670	PepSY_2	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	4.39
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	2.63
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.88
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.88
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.09 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.58 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	56.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Unclassified	root	N/A	8.77 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	56.14 %
Unclassified	root	N/A	8.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.51 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	3.51 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	56.14 %
Unclassified	root	N/A	8.77 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	3.51 %
Altererythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter	1.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	56.14 %
Unclassified	root	N/A	8.77 %
Methylocapsa palsarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	3.51 %
Altererythrobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	1.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig54846	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
2170459012\|GOYVCMS02GMV87	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
2189573004\|GZGWRS402JPAKF	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300001661\|JGI12053J15887_10178332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300002245\|JGIcombinedJ26739_100088276	All Organisms → cellular organisms → Bacteria → Proteobacteria	2891	Open in IMG/M
3300002245\|JGIcombinedJ26739_100460103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1150	Open in IMG/M
3300002245\|JGIcombinedJ26739_101258410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300003505\|JGIcombinedJ51221_10013571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2719	Open in IMG/M
3300005167\|Ga0066672_10053788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2319	Open in IMG/M
3300005172\|Ga0066683_10379004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300005179\|Ga0066684_10027269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3061	Open in IMG/M
3300005332\|Ga0066388_101704102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1115	Open in IMG/M
3300005332\|Ga0066388_104413114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300005434\|Ga0070709_11364986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005435\|Ga0070714_101469205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300005437\|Ga0070710_10037034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2671	Open in IMG/M
3300005439\|Ga0070711_101881508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300005540\|Ga0066697_10098146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1705	Open in IMG/M
3300005552\|Ga0066701_10931387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300005553\|Ga0066695_10143826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1482	Open in IMG/M
3300005554\|Ga0066661_10061790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2170	Open in IMG/M
3300005556\|Ga0066707_10074965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2027	Open in IMG/M
3300005557\|Ga0066704_10242963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1222	Open in IMG/M
3300005560\|Ga0066670_10929969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300005764\|Ga0066903_100114140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	3721	Open in IMG/M
3300005764\|Ga0066903_101864463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300005764\|Ga0066903_101973349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1120	Open in IMG/M
3300005764\|Ga0066903_104164657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300006046\|Ga0066652_101683655	Not Available	579	Open in IMG/M
3300006163\|Ga0070715_10324700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300006176\|Ga0070765_100026762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4417	Open in IMG/M
3300006354\|Ga0075021_10338539	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006791\|Ga0066653_10364235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300006800\|Ga0066660_10370455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1171	Open in IMG/M
3300009012\|Ga0066710_100340047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2215	Open in IMG/M
3300010085\|Ga0127445_1052820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010366\|Ga0126379_11427151	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010376\|Ga0126381_102755941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300010856\|Ga0126358_1149310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300011269\|Ga0137392_11014338	Not Available	682	Open in IMG/M
3300011270\|Ga0137391_10227904	Not Available	1617	Open in IMG/M
3300012199\|Ga0137383_10524852	Not Available	867	Open in IMG/M
3300012200\|Ga0137382_10323440	Not Available	1079	Open in IMG/M
3300012202\|Ga0137363_10247680	Not Available	1447	Open in IMG/M
3300012356\|Ga0137371_10663069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300012361\|Ga0137360_10939859	Not Available	746	Open in IMG/M
3300012372\|Ga0134037_1155263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300012373\|Ga0134042_1097437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300012957\|Ga0164303_11516137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300012984\|Ga0164309_11678446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300012987\|Ga0164307_11392096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300014150\|Ga0134081_10058735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1159	Open in IMG/M
3300015358\|Ga0134089_10532086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300015371\|Ga0132258_11678511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1603	Open in IMG/M
3300016270\|Ga0182036_10086574	Not Available	2091	Open in IMG/M
3300016270\|Ga0182036_10373018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300016341\|Ga0182035_12166843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300016357\|Ga0182032_10674352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	866	Open in IMG/M
3300016371\|Ga0182034_11699910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300016387\|Ga0182040_11264455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300016445\|Ga0182038_10483766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	1053	Open in IMG/M
3300016445\|Ga0182038_11589371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300017947\|Ga0187785_10539715	Not Available	588	Open in IMG/M
3300018431\|Ga0066655_10021154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3032	Open in IMG/M
3300018433\|Ga0066667_10051825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2483	Open in IMG/M
3300020579\|Ga0210407_10197387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1563	Open in IMG/M
3300020579\|Ga0210407_11081799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300021168\|Ga0210406_10292589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1326	Open in IMG/M
3300021168\|Ga0210406_11216742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300021170\|Ga0210400_10714104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300021171\|Ga0210405_10497451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300021178\|Ga0210408_10336642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M
3300021377\|Ga0213874_10118016	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300021432\|Ga0210384_11751033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300021475\|Ga0210392_11426032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300021478\|Ga0210402_10745917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300021560\|Ga0126371_12744358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300025898\|Ga0207692_10332608	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300026332\|Ga0209803_1125595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300026524\|Ga0209690_1295065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300026528\|Ga0209378_1050818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2013	Open in IMG/M
3300026540\|Ga0209376_1338926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300026547\|Ga0209156_10018945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4183	Open in IMG/M
3300026548\|Ga0209161_10089612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1881	Open in IMG/M
3300026550\|Ga0209474_10097389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1987	Open in IMG/M
3300027069\|Ga0208859_1028343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300027603\|Ga0209331_1013195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2152	Open in IMG/M
3300027603\|Ga0209331_1016431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1917	Open in IMG/M
3300027610\|Ga0209528_1087943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300027727\|Ga0209328_10220827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300028047\|Ga0209526_10033253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3628	Open in IMG/M
3300028047\|Ga0209526_10331595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300029636\|Ga0222749_10174625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1060	Open in IMG/M
3300031231\|Ga0170824_101069863	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300031231\|Ga0170824_112736494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1537	Open in IMG/M
3300031446\|Ga0170820_15650990	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300031545\|Ga0318541_10111042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1481	Open in IMG/M
3300031573\|Ga0310915_10106812	Not Available	1898	Open in IMG/M
3300031748\|Ga0318492_10379995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	741	Open in IMG/M
3300031768\|Ga0318509_10504560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	676	Open in IMG/M
3300031795\|Ga0318557_10421124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300031805\|Ga0318497_10327636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300031819\|Ga0318568_10962698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	527	Open in IMG/M
3300031879\|Ga0306919_11050807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031890\|Ga0306925_11034692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300031890\|Ga0306925_12136608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031910\|Ga0306923_10750437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1082	Open in IMG/M
3300031910\|Ga0306923_12280486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300031954\|Ga0306926_10763697	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300032059\|Ga0318533_11449472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300032066\|Ga0318514_10505702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	643	Open in IMG/M
3300032076\|Ga0306924_12136164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300032076\|Ga0306924_12197212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300032090\|Ga0318518_10588437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.37%
Host-Associated	Host-Associated	1.75%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.49%
Plants	Host-Associated → Plants	1.75%
Aquatic	Environmental → Aquatic	0.88%
Modeled	Engineered → Modeled	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.49%
Sediment	Environmental → Aquatic → Sediment	0.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.88%
Roots	Host-Associated → Plants → Roots	0.88%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.68%
Loam	Environmental → Terrestrial → Soil → Loam	21.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.88%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.88%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.88%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.88%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0846.00003500	2166559005	Simulated	MLIRLIEGASFDPEGTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGSGGSTASLRLADRL
N56_06849720	2170459012	Grass Soil	MLIRLIEGASFDPEGTRLLALAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGXGRKYGIAEAR
FG2_05733080	2189573004	Grass Soil	MLIRLIEGASFDPEGTRLLALAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGRKYGIAEAR
JGI12053J15887_101783322	3300001661	Forest Soil	MLIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGA
JGIcombinedJ26739_1000882767	3300002245	Forest Soil	MPIRIIQGASFDPETTRLLGLAYERACASVAPDVTVREALAKRIIQAATRGERDLEKLIEYGLGSNEGLAQAS*
JGIcombinedJ26739_1004601031	3300002245	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLG
JGIcombinedJ26739_1012584102	3300002245	Forest Soil	MTIRLIQGASFXPETPRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGKNNMLADSV*
JGIcombinedJ51221_100135713	3300003505	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAASKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR*
Ga0066672_100537882	3300005167	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066683_103790042	3300005172	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVVRLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066684_100272692	3300005179	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGKERLASQ*
Ga0066388_1017041022	3300005332	Tropical Forest Soil	MAIRIIQGASFDPETIGLLALAYERACEGVAPDVKVREALAKRIIDAAKRGERDLEKLVEYGLGKNGDVAEAG*
Ga0066388_1044131142	3300005332	Tropical Forest Soil	IRLIQSASFDPETTRLLGLAYERACEGVSPDVTVREALAKRIIEAARRGERDLDKLIEYGLGNSDGLADAQGAGQSGLAPVLPATMH*
Ga0070709_113649862	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	KRLGLEGATAMLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0070714_1014692051	3300005435	Agricultural Soil	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0070710_100370344	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0070711_1018815081	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKGDMLADAGAQRGQERLASQ*
Ga0066697_100981462	3300005540	Soil	TDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066701_109313871	3300005552	Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066695_101438263	3300005553	Soil	MPIRLIQGASFDAETTDLLGLAYDRACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066661_100617902	3300005554	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGNDDMLADAGAQRGQERLASQ*
Ga0066707_100749653	3300005556	Soil	DLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066704_102429633	3300005557	Soil	TGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066670_109299692	3300005560	Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGK
Ga0066903_1001141404	3300005764	Tropical Forest Soil	MLIRIHSASFDSETTRILGLAYDRACETVCPDVSVREALAKRIIEAARRGERKPEKLVEYALVKTGGLTG*
Ga0066903_1018644633	3300005764	Tropical Forest Soil	MPIRLIQVASFDPETTRLLALAYERACEGVGPDVTVREALAKRIIAAAKRGERDLQRLINYALGKHDVLADAV*
Ga0066903_1019733492	3300005764	Tropical Forest Soil	MPIRLIQVASFDPETTRLLGLAYERACEDVGPDVTVREALAKRIIAAAKRGERDLERLIKYGLGKHGVLADAL*
Ga0066903_1041646571	3300005764	Tropical Forest Soil	MPIRLIQGACFDPETTRLLGLAYERACEHAALDATVREPLAKRIIEAGRRGERDPEKLVEYGLGKNVRLMRSKGRASLV*
Ga0066652_1016836551	3300006046	Soil	ASFDSETTRLLGLAYDRASEKAGPDVKVREALANRIIEAAKRGQRDLEKLIEYGLGSNDGIAEAG*
Ga0070715_103247002	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LYERPSPWPSETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0070765_1000267621	3300006176	Soil	MLIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAASKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR*
Ga0075021_103385393	3300006354	Watersheds	MLIRLIEGASFDPEGTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGRKDGIAEAR*
Ga0066653_103642351	3300006791	Soil	AKHPFLWSGTMPIRLIHGASFDSETTRLLGLAYDRASEKAGPDVKVREALANRIIEAAKRGERDLEKLIEYGLGSNDGIAEAG*
Ga0066660_103704552	3300006800	Soil	MLIRLIQGAYFEAETTGILGFANERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0066710_1003400471	3300009012	Grasslands Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVER
Ga0127445_10528202	3300010085	Grasslands Soil	LKGATAMPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0126379_114271512	3300010366	Tropical Forest Soil	RSRLGAKAMLIRIHSASFDSETTRILGLAYDRACETVCPDVSVREALAKRIIEAARRGERKPEKLVEYALVKTGGLTG*
Ga0126381_1027559411	3300010376	Tropical Forest Soil	MAIRIIQGASFDPETIGLLALAYERACESPAPDVKVREALAKRIMDAAKRGERDLEKLVEYGLAGAGCC*
Ga0126358_11493101	3300010856	Boreal Forest Soil	CVKGTAAMLIRLIEGASFDPEGTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGRKDGIAEAR*
Ga0137392_110143381	3300011269	Vadose Zone Soil	MGLAYDRACEGVSEERVVRELIARRIIEAAKRGERNLGKLIEYGRGREDGVAEAG*
Ga0137391_102279042	3300011270	Vadose Zone Soil	MPLRLIQGASFDPATTQLMGLAYDRACEGVSEERVVRELIARRIIEAAKRGERNLGKLIEYGRGREDDVAEAG*
Ga0137383_105248521	3300012199	Vadose Zone Soil	MPLRLIQGASFDPATTQLMGLAYDRACEGVSEERVVREQIARRIIEAAKRGERNLGKLIEYGRGREDGVAEAG*
Ga0137382_103234401	3300012200	Vadose Zone Soil	MPLRLIQGASFDPATTQLVGLAYDRACEGVSEERVVRELIARRIIEAAKRGERNLGKLIEYGRGREDGVAEAG*
Ga0137363_102476802	3300012202	Vadose Zone Soil	MPLRLIQGASFDPATTQLMGLAYDRACEGVSEERVVRELIARRIIEAAKRGERNLGKLIEYGRGREDGVAEAG*
Ga0137371_106630692	3300012356	Vadose Zone Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLG
Ga0137360_109398591	3300012361	Vadose Zone Soil	MPLRLIQGASFDPATTQLMGLAYDRACEGVSEEGVVRELIARRIIEAAKRGERNLGKLIEYGRGREDDVAEAG*
Ga0134037_11552631	3300012372	Grasslands Soil	GLKGATAMPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLPSQ*
Ga0134042_10974372	3300012373	Grasslands Soil	GATAMPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0164303_115161372	3300012957	Soil	FDAETTRLLGLAYERACEGLAPDVTAREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0164309_116784461	3300012984	Soil	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAIAKRIIVAAKRGERDVGRLIKYGLGKDDTLADAGAQRGPERLASHKSR*
Ga0164307_113920962	3300012987	Soil	TAMLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR*
Ga0134081_100587353	3300014150	Grasslands Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVQEAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ*
Ga0134089_105320861	3300015358	Grasslands Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQER
Ga0132258_116785112	3300015371	Arabidopsis Rhizosphere	MPLRLIQAAAFDPETTRLLGLAYDHGCEFVAPDVTVREELARRIIEAARRGERNIEKLTEYGVGRSCPAQSEAMSTT*
Ga0182036_100865741	3300016270	Soil	MPIRLIHGASFDPATTQLLGLAYERACQDVGSDVTVREALARRIIEAAKRGERDLQKLTNYGLGKIHRLTETV
Ga0182036_103730183	3300016270	Soil	MPIRLIQVASFDPETTRLLALAYERACEGVGPDVTVREALAKRIIAAAKRGERGLQRLINYALGKHDVLADAV
Ga0182035_121668431	3300016341	Soil	MPIRLIQGASFDPETTRLLGLAYDRACKGVAPDQTARETLAKRIIEAAKRGERDLERLIGYGLGRNDGLPEAG
Ga0182032_106743522	3300016357	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQSLADEV
Ga0182034_116999101	3300016371	Soil	PIRIIQGASFDPETIELLALAYERACEAVAPDVKVREALAKRIIDAGKRGERDLEKLVEYGLGKNGDVAEAG
Ga0182040_112644552	3300016387	Soil	MPIRLIQVASFDPETTRLLGLAYERACEDVGPDVTVREALAKRIIAAAKRGERDLERLIKYGLGKHGVLADAL
Ga0182038_104837662	3300016445	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQ
Ga0182038_115893711	3300016445	Soil	TTSMPIRLIHGASFDPATTQLLGLAYERACQDVGSDVTVREALARRIIEAAKRGERDLQKLTNYGLGKIHRLTEAV
Ga0187785_105397151	3300017947	Tropical Peatland	MLIRIQGASFDAETTRILGLAFDRACETACPDVMVREALAKRIIEAARHGERKTDKLVAYALRKS
Ga0066655_100211544	3300018431	Grasslands Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0066667_100518253	3300018433	Grasslands Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAGAKRIIVAGKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0210407_101973873	3300020579	Soil	VSFDGETTRLLGLAYERACESVAPDVIVREALAKRIIEAAKRGERALKKLIEYGLGRNDGIAEAG
Ga0210407_110817991	3300020579	Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAASKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR
Ga0210406_102925894	3300021168	Soil	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGP
Ga0210406_112167421	3300021168	Soil	KAPGTERSEAMPIRLIQGASFDAETTRLLGLAYERACEGLVPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGQERLASQRAL
Ga0210400_107141041	3300021170	Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR
Ga0210405_104974511	3300021171	Soil	AVIFLERGVHKSDAQRYLHGRKRLGLKGATAMPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAASKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR
Ga0210408_103366422	3300021178	Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLVPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRG
Ga0213874_101180162	3300021377	Plant Roots	MAVTIQLAQEACFDPEVTHLLGAAYESACKGIGPDPTAREALAKRIMEAAKCGERDLERLIKYGIETT
Ga0210384_117510331	3300021432	Soil	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKS
Ga0210392_114260321	3300021475	Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVGEAVAKRIIAASEGGERDVERLLK
Ga0210402_107459171	3300021478	Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLVPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGK
Ga0126371_127443581	3300021560	Tropical Forest Soil	MAIRIIQGASFDPETIGLLALAYERACEGVAPDVKVREALAKRIMDAAKRGERDLEKLVEYGLGKNGDVAEAG
Ga0207692_103326081	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RLGLEGATAMLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGEDDMLADAGAQRGPERLASHKSR
Ga0209803_11255951	3300026332	Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGL
Ga0209690_12950651	3300026524	Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDLLADAGAQRGQERLASQ
Ga0209378_10508181	3300026528	Soil	FDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0209376_13389261	3300026540	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLP
Ga0209156_100189451	3300026547	Soil	MPIRLIQGASFDAETTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYG
Ga0209161_100896124	3300026548	Soil	TTDLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0209474_100973893	3300026550	Soil	MPIRLIQGASFDAETTGLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0208859_10283431	3300027069	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAASKGGERDVERLIKYGLGK
Ga0209331_10131952	3300027603	Forest Soil	MPIRIIQGASFDPETTRLLGLAYERACASVAPDVTVREALAKRIIQAATRGERDLEKLIEYGLGSNEGLAQAS
Ga0209331_10164312	3300027603	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGSAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR
Ga0209528_10879431	3300027610	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGSAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQREQERLASQSAL
Ga0209328_102208271	3300027727	Forest Soil	MLIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASR
Ga0209526_100332534	3300028047	Forest Soil	MPIRLIQGASFDAETTRLLGLAYERACEGSAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDILADAGAQRGQERLASQ
Ga0209526_103315952	3300028047	Forest Soil	MLIRLIEGASFAPESTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGRKDGIADPS
Ga0222749_101746252	3300029636	Soil	MLFQLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIAAAKGGERDVERLINYGLGKDDMLADAGAQRGPERLAGHKSR
Ga0170824_1010698632	3300031231	Forest Soil	MLIRLIEGASFDPECTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIEYGLGRKDGIAEAR
Ga0170824_1127364942	3300031231	Forest Soil	MLIRLIQGASFDAETTRLLGLAYERACEGLAPDVTVREAVAKRIIVAAKGGERDVERLIKYGLGKDDMLADAGAQRGQERLASQ
Ga0170820_156509901	3300031446	Forest Soil	MLIRLIEGASFDPECTRLLGLAYERACESVAPDMTIREALAKRIIEAAKRGERNLEGLIKYGLGRKDGIAEAR
Ga0318541_101110422	3300031545	Soil	MPIRLIQVASFDPETTRLLALAYERACEGVGPDVTVREALAKRIIAAAKRGERDLQRLINYALGKHDVLADAV
Ga0310915_101068124	3300031573	Soil	MPIRLIHGASFDPATTELLGLAYERACEDVGSDVTVREALARRIIEAAKRGERDLQKLTNYGLGKIHRLTEAV
Ga0318492_103799951	3300031748	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQS
Ga0318509_105045602	3300031768	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQSLADEVQAAGQSGLAPILPATTPSSPQLRGP
Ga0318557_104211242	3300031795	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQSLADEVQAAGQSGLAPILPATTP
Ga0318497_103276363	3300031805	Soil	MPIRLIQVASFDPETTRLLALAYERACEGVGPDVTVREALAKRIIAAAKRGERDLQRLINYALGKHDV
Ga0318568_109626981	3300031819	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIRYGRGKDQSLADEVQAAGQS
Ga0306919_110508071	3300031879	Soil	MPIRLIHGASFDPATTQLLGLAYERACQDVGSDVTVREALARRIIEAAKRGERDLQKLTNYGLGKIHRLTEAV
Ga0306925_110346921	3300031890	Soil	MPILLIEGASFDPETTRLLGLAYERACLDVPPDEPVREALAKRIIVAARRGERDLERLIKYGLGKTIVADAV
Ga0306925_121366082	3300031890	Soil	MPIRLIQGASFDPETTRLLGLAFERASETVAADVTLREALAKRIIEAARRGERDVEKLIGYGLGRNNGFAATGLRDWPAATGTTEVRESD
Ga0306923_107504371	3300031910	Soil	MPIRLIHGASFDPATTQLLGLAYERACQDVGSDVTVREALARRIIEAAKRGERDLQKLTNYGLG
Ga0306923_122804861	3300031910	Soil	MPIRLIQGASFDPETTRLLGLAFERASETVAADVTLREALAKRIIEAARRGERDVEKLIGYGLGRNNGFAATGLRDWPAATG
Ga0306926_107636971	3300031954	Soil	ERVVPIRLIQGASFDPETTRLLRLAYERACESVAPDVKVREAVAKRIIEAAKRGERDLEKLIEYGLGRNDGLPEAG
Ga0318533_114494721	3300032059	Soil	FDPETTRLLGLAYDRACKGVAPDETARETLAKRIIEAAKRGERDLEKLIGYGLGRNNGLPEAG
Ga0318514_105057021	3300032066	Soil	MPIRLIQVASFDPETTRLLGLAYERACEGVGPDVTVREALAKRIIEVARRGERDLDKLIR
Ga0306924_121361641	3300032076	Soil	MPIRLIEGASFDPETTRFLGLAYERACDGVADVTVREAVAKRIIKAAKRGERDLERLVEYGLGKSDLLADTQV
Ga0306924_121972121	3300032076	Soil	MPIRIIQGASFDPETIGLLALAYERACESLAPDVKVREALAKRIIDAATRGERDLEKLVEYGLAGAG
Ga0318518_105884373	3300032090	Soil	IQVASFDPETTRLLALAYERACEGVGPDVTVREALAKRIIAAAKRGERDLQRLINYALGKHDVLADAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081821

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences