NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F081839

Metagenome / Metatranscriptome Family F081839

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081839
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 53 residues
Representative Sequence GAIADRVLAARDRYPREARFYDALRTQAKRVYHVQPGHGLAGPWVSVYRL
Number of Associated Samples 105
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.80 %
% of genes near scaffold ends (potentially truncated) 93.86 %
% of genes from short scaffolds (< 2000 bps) 91.23 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.842 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.930 % of family members)
Environment Ontology (ENVO) Unclassified
(34.211 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.246 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.92%    β-sheet: 14.10%    Coil/Unstructured: 58.97%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF02274ADI 22.81
PF00365PFK 10.53
PF13673Acetyltransf_10 2.63
PF00583Acetyltransf_1 2.63
PF01135PCMT 1.75
PF12847Methyltransf_18 0.88
PF05553DUF761 0.88
PF02617ClpS 0.88
PF13646HEAT_2 0.88
PF02653BPD_transp_2 0.88
PF13578Methyltransf_24 0.88
PF00528BPD_transp_1 0.88
PF07885Ion_trans_2 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG1834N-Dimethylarginine dimethylaminohydrolaseAmino acid transport and metabolism [E] 22.81
COG2235Arginine deiminaseAmino acid transport and metabolism [E] 22.81
COG4874Uncharacterized conserved proteinFunction unknown [S] 22.81
COG02056-phosphofructokinaseCarbohydrate transport and metabolism [G] 10.53
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 1.75
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 1.75
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 1.75
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 1.75
COG2127ATP-dependent Clp protease adapter protein ClpSPosttranslational modification, protein turnover, chaperones [O] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.84 %
UnclassifiedrootN/A13.16 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig1203389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria705Open in IMG/M
2170459005|F1BAP7Q01BZSYDAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300000550|F24TB_11261854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300000956|JGI10216J12902_105170357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium653Open in IMG/M
3300000956|JGI10216J12902_111105450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium599Open in IMG/M
3300001535|A3PFW1_10814810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300004081|Ga0063454_100090001All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300004114|Ga0062593_102257233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300004480|Ga0062592_100487847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1013Open in IMG/M
3300005176|Ga0066679_10390579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium911Open in IMG/M
3300005181|Ga0066678_10640086All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005330|Ga0070690_100026405All Organisms → cellular organisms → Bacteria3582Open in IMG/M
3300005335|Ga0070666_11489130Not Available506Open in IMG/M
3300005343|Ga0070687_101245177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300005434|Ga0070709_10054923All Organisms → cellular organisms → Bacteria2513Open in IMG/M
3300005438|Ga0070701_10066830All Organisms → cellular organisms → Bacteria1912Open in IMG/M
3300005444|Ga0070694_100852502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300005457|Ga0070662_101634292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium556Open in IMG/M
3300005467|Ga0070706_101646910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300005468|Ga0070707_101711183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium596Open in IMG/M
3300005471|Ga0070698_100990901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300005544|Ga0070686_101101912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium656Open in IMG/M
3300005546|Ga0070696_100268063All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300005547|Ga0070693_100856859All Organisms → cellular organisms → Bacteria → Terrabacteria group678Open in IMG/M
3300005575|Ga0066702_10211150All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300005719|Ga0068861_100662263All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300006046|Ga0066652_101127385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium743Open in IMG/M
3300006163|Ga0070715_10079636All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300006574|Ga0074056_11771127All Organisms → cellular organisms → Bacteria → Terrabacteria group885Open in IMG/M
3300006575|Ga0074053_10021619All Organisms → cellular organisms → Bacteria2563Open in IMG/M
3300006796|Ga0066665_10270212All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300006800|Ga0066660_11435293Not Available542Open in IMG/M
3300006845|Ga0075421_101102096Not Available892Open in IMG/M
3300006904|Ga0075424_100499597All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300006904|Ga0075424_101365680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium753Open in IMG/M
3300009098|Ga0105245_11670223Not Available689Open in IMG/M
3300009098|Ga0105245_12096520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300009101|Ga0105247_11076486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium633Open in IMG/M
3300009137|Ga0066709_104172887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300009545|Ga0105237_12036244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300010037|Ga0126304_10745098Not Available663Open in IMG/M
3300010042|Ga0126314_11531830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300010044|Ga0126310_11417510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300010329|Ga0134111_10292962Not Available676Open in IMG/M
3300011119|Ga0105246_11334067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium666Open in IMG/M
3300011119|Ga0105246_12358676Not Available521Open in IMG/M
3300012010|Ga0120118_1136974All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300012091|Ga0136625_1332777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300012208|Ga0137376_11267566Not Available627Open in IMG/M
3300012210|Ga0137378_11479923All Organisms → cellular organisms → Bacteria → Terrabacteria group591Open in IMG/M
3300012354|Ga0137366_10192988All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300012356|Ga0137371_10625741All Organisms → cellular organisms → Bacteria → Terrabacteria group826Open in IMG/M
3300012532|Ga0137373_10123361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2225Open in IMG/M
3300012955|Ga0164298_10149500All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300012958|Ga0164299_11133591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium587Open in IMG/M
3300012960|Ga0164301_10702452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium761Open in IMG/M
3300012961|Ga0164302_11222552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300012984|Ga0164309_10870340All Organisms → cellular organisms → Bacteria → Terrabacteria group732Open in IMG/M
3300012985|Ga0164308_12130070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300012987|Ga0164307_10259440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1218Open in IMG/M
3300013307|Ga0157372_11229658All Organisms → cellular organisms → Bacteria → Terrabacteria group865Open in IMG/M
3300013308|Ga0157375_11016912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium968Open in IMG/M
3300013308|Ga0157375_12950356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300013501|Ga0120154_1091614Not Available698Open in IMG/M
3300013758|Ga0120147_1094911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300014325|Ga0163163_10231727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1896Open in IMG/M
3300014745|Ga0157377_11510127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300014965|Ga0120193_10085044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria529Open in IMG/M
3300015372|Ga0132256_100673653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1150Open in IMG/M
3300015374|Ga0132255_104518510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300018027|Ga0184605_10002317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6379Open in IMG/M
3300018028|Ga0184608_10080791All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300018032|Ga0187788_10133730All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300018071|Ga0184618_10139358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium984Open in IMG/M
3300018071|Ga0184618_10158037All Organisms → cellular organisms → Bacteria → Terrabacteria group930Open in IMG/M
3300018431|Ga0066655_10223199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1183Open in IMG/M
3300018468|Ga0066662_10053235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2596Open in IMG/M
3300019879|Ga0193723_1107419All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300020005|Ga0193697_1046640All Organisms → cellular organisms → Bacteria → Terrabacteria group1080Open in IMG/M
3300020006|Ga0193735_1131266All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300021418|Ga0193695_1111929All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300023066|Ga0247793_1071709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300025916|Ga0207663_10057220All Organisms → cellular organisms → Bacteria → Terrabacteria group2456Open in IMG/M
3300025916|Ga0207663_10889518All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria712Open in IMG/M
3300025918|Ga0207662_11049089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300025922|Ga0207646_11931068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300025926|Ga0207659_10655031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium898Open in IMG/M
3300025927|Ga0207687_11615612Not Available556Open in IMG/M
3300025972|Ga0207668_10190497All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300026118|Ga0207675_100686271All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300026142|Ga0207698_11683894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia650Open in IMG/M
3300026332|Ga0209803_1242356Not Available625Open in IMG/M
3300028592|Ga0247822_10610397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300028707|Ga0307291_1203652All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300028709|Ga0307279_10053964Not Available663Open in IMG/M
3300028718|Ga0307307_10082399All Organisms → cellular organisms → Bacteria → Terrabacteria group968Open in IMG/M
3300028771|Ga0307320_10375951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300028784|Ga0307282_10666573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300028787|Ga0307323_10181055All Organisms → cellular organisms → Bacteria → Terrabacteria group761Open in IMG/M
3300028796|Ga0307287_10079275All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300028799|Ga0307284_10028935All Organisms → cellular organisms → Bacteria1840Open in IMG/M
3300028802|Ga0307503_10575696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300028811|Ga0307292_10310968All Organisms → cellular organisms → Bacteria → Terrabacteria group661Open in IMG/M
3300028811|Ga0307292_10429216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300028875|Ga0307289_10462759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300030336|Ga0247826_11380990All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300031548|Ga0307408_100783850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium864Open in IMG/M
3300031903|Ga0307407_10516236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium878Open in IMG/M
3300031995|Ga0307409_100343732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1405Open in IMG/M
3300032002|Ga0307416_100257625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1703Open in IMG/M
3300032009|Ga0318563_10707178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.77%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.39%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.39%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.51%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.51%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.51%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.51%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.75%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.88%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.88%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.88%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012091Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014965Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_050668202124908045SoilTGAVADRVLAARDRYPREARFYDQLRTQARAVYHLEPGHGLTGPWVSLYRL
E41_110064702170459005Grass SoilFVTGAVADRVLAARDHYPQEARFYDDLRTRAKRVYHVQSGHGLTGPWVSLYRL
F24TB_1126185413300000550SoilRREGIDYVLVSGAVADRVLAARDRYPREARFYDQLRTQARAVYHLEPGRGLTGPWVSLYRL*
JGI10216J12902_10517035723300000956SoilVRYALVTGAIADRVLAARDRYPREARFYDQLRAQAKRVYHVEPGHGLTGPWVSLYRL*
JGI10216J12902_11110545023300000956SoilEQGVRYVVVTGAVTDRVLAARDHYPREARFYDELAANATRSYYVQPGGDLAGPWVAVYRLQ*
A3PFW1_1081481023300001535PermafrostVLAARDRYPREARFYDALRAQAKRVYHVEPGHGLAGPWVSVYRL*
Ga0063454_10009000113300004081SoilAARDRYPREARFYDDLERRARRVYYLEPGGDLAGPWVAVYRLRA*
Ga0062593_10225723323300004114SoilVTGAVADRVLAARDHYPQEARFYDDLRTQANRVYHVQAGHGLTGPWVSLYRL*
Ga0062592_10048784733300004480SoilVRYALVTGAIADRVLAVRDRYPREAHFYDQLRTRGKRVYHVESGHGLTGPWVSLYRL*
Ga0066679_1039057933300005176SoilAARSNYPREARFYDDLRAQGKRLYYLAPGDGRAGPWVAVYRI*
Ga0066678_1064008623300005181SoilIHDVVVTGAVTDRVLAARDRYPREAAFYDDLRAKARRVFYLQAGGDLAGPWVAVYRL*
Ga0070690_10002640513300005330Switchgrass RhizosphereDVVVTGAVTDRVLAARDRYPREARFYDELERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0070666_1148913013300005335Switchgrass RhizosphereLRSKGVDYVLVTGAVEDRVLAARDHYPQEAHFYDDLRTRANRVYHVQSGHGLTGPWVSLYRL*
Ga0070687_10124517723300005343Switchgrass RhizosphereAVTDRVLAARDRYPREAAFYDRLRTNSRRVFYLTPGGEFAGPWVAVYRL*
Ga0070709_1005492313300005434Corn, Switchgrass And Miscanthus RhizosphereAVTDRVLAARDRYPREARFYDDLERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0070701_1006683013300005438Corn, Switchgrass And Miscanthus RhizosphereRVLAARDRYPREARFYDDLERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0070694_10085250223300005444Corn, Switchgrass And Miscanthus RhizosphereVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0070662_10163429213300005457Corn RhizosphereARLRAQGVHYALVTGAIADRVLAARDTYPKEAHFYDELRTRAKRVYHVKAGHGLTGPWVSLYRL*
Ga0070706_10164691023300005467Corn, Switchgrass And Miscanthus RhizosphereSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0070707_10171118323300005468Corn, Switchgrass And Miscanthus RhizosphereRDRYPREARFYDDVRLQAKRVYHVQPGHGLAGPWVSVYRL*
Ga0070698_10099090123300005471Corn, Switchgrass And Miscanthus RhizosphereGVHDVVVTGAITDRVLAARDRYPREAAFYDDLRTKARRVFFLGPGGDLAGPWVAVYRL*
Ga0070686_10110191223300005544Switchgrass RhizosphereVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVQAGHGLTGPWVSVYRL*
Ga0070696_10026806333300005546Corn, Switchgrass And Miscanthus RhizosphereVVVTGAVTDRVLAARDRYPREARFYDELERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0070693_10085685913300005547Corn, Switchgrass And Miscanthus RhizosphereARDRYPREARFYDELERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0066702_1021115013300005575SoilADRVRAAADRYPREVRFYDDLRRRGRLLYRIDAGAGRAGPWVAVYRL*
Ga0068861_10066226333300005719Switchgrass RhizosphereYALVTGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL*
Ga0066652_10112738523300006046SoilLRAEGVRYALVTGAIADRVLAARDRYPKEAHFYDQLRTRAKRVYHVEPGHGLTGPWVSLYRL*
Ga0070715_1007963613300006163Corn, Switchgrass And Miscanthus RhizosphereGAVTDRVLAARDRYPREARFYDDLERRAQRVYYVEPGGDLAGPWVAVYRLRA*
Ga0074056_1177112723300006574SoilVLAARDRYPREARFYDDLERRAQRVYYVEPGGGLAGPWVAVYRLRA*
Ga0074053_1002161953300006575SoilVTGAVTDRVLAARDRYPREARFYDDLERRAQRVYYVEPGGDLAGPWVAVYRLPA*
Ga0066665_1027021233300006796SoilIEDVVVTGAITDRVLAARDRYPREASFYDDLRAQARRVFYLTPGAGLAGPWVAVYRLRA*
Ga0066660_1143529323300006800SoilRVLAARDRYPREASFYDNLRRRARRVFYVTPGAGLAGPWVAVYRLRT*
Ga0075421_10110209613300006845Populus RhizosphereYALVTGAIEDRVLAARDHYPREARFYDQLRAREKRLYYVSAGHGLSGPWVALYRI*
Ga0075424_10049959713300006904Populus RhizosphereRLRREGIRYALVTGAIEDRVLAARDHYPREARFYDQLRAREKRLYYVSAGHGLSGPWVALYRI*
Ga0075424_10136568023300006904Populus RhizosphereVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0105245_1167022313300009098Miscanthus RhizosphereDRVLAARDHYPREARFYDQLRTREKRLYYVSAGHGLSGPWVALYQI*
Ga0105245_1209652013300009098Miscanthus RhizosphereKGVNYVLVTGAVADRVLAARDHYPQEARFYDDLRTRAKRVYHVQSGHGLTGPWVSLYRL*
Ga0105247_1107648613300009101Switchgrass RhizosphereTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0066709_10417288723300009137Grasslands SoilGIHVVVVTGAVTDRVLAARSEYPREARFYEDLRAQARRLYYVEPGGDRAGPWVAVYRI*
Ga0105237_1203624413300009545Corn RhizosphereIDDRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0126304_1074509813300010037Serpentine SoilTDRVLAAQSSYPRETRFYDDLRQRAKRVYHLEPGGDLAGPWVAVYEL*
Ga0126314_1153183023300010042Serpentine SoilGAVTDRVLAARSDYPREAQFYDDLRRTARRAFYLWPGNDRAGPWVAVYRL*
Ga0126310_1141751023300010044Serpentine SoilTDRVLAARGDYPREARFYDDLRMKAKRAFYLEPGDGRAGPWVAVYRL*
Ga0134111_1029296223300010329Grasslands SoilAVTDRVLAARDRYPREAAFYDDLRGKARRVFYLRPGGDLAGPWVAVYRLAA*
Ga0105246_1133406723300011119Miscanthus RhizosphereDRVLAARDRYPREAAFYDRLRTNSRRVFYLTPGGEFAGPWVAVYRL*
Ga0105246_1235867623300011119Miscanthus RhizosphereRAEGVSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL
Ga0120118_113697413300012010PermafrostGVDYALVTGVIADRVLAARDRYPREARFYDALRTQAKRVYHVEPGHGLAGPWVSVYRL*
Ga0136625_133277723300012091Polar Desert SandLAARDRYPREARFYADLRTRARRLYYVSSGKGLAGPWVALYRL*
Ga0137376_1126756623300012208Vadose Zone SoilLAARDRYPREAAFYDDLRTKARRVFYLQAGGDLAGPWVAVYRF*
Ga0137378_1147992313300012210Vadose Zone SoilAVTDRVLAARDRYPREAAFSDDLRKKARRVFYLRPGGDLAGPWVAVYRL*
Ga0137366_1019298833300012354Vadose Zone SoilVLAARDRYPREAAFYDDLRTKARRVFYLQAGGDLAGPWVAVYRL*
Ga0137371_1062574113300012356Vadose Zone SoilVVVTGVVTDRVLAARERYPREAAFYDDLRTKARRVFYVTPGGDLAGPWVAVYRLGA*
Ga0137373_1012336143300012532Vadose Zone SoilLGIHVVVVTGAVTDRVLAARSDYPREASFYDDLRTKARRAFYLEPGGDLAGPWVAVYRL*
Ga0164298_1014950013300012955SoilTDRVLAARDRYPREARFYDELQSRAQRVYYVQPGGDLAGPWVAVYRLRA*
Ga0164299_1113359113300012958SoilPNRNLATLRSKGVGYVLVTGAIADRVLAARDHYPQEASFYDDLRTRAKRVYHVQSGHGLTGPWVSLYRL*
Ga0164301_1070245223300012960SoilGRLRAEGVRYVLVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0164302_1122255213300012961SoilRDRYPREARFYDDLRARTKRIYYVSPGDGLAGPWVAIYRL*
Ga0164309_1087034013300012984SoilAVTDRVLAARDRYPREARFYDDLEKRAQRVYYVEPGGDLAGPWVAVYRLRS*
Ga0164308_1213007013300012985SoilLVTGAIADRVLAARDRYPKEARFYDELRTRARRVYHVEAGHGLTGPWVSLYRL*
Ga0164307_1014257313300012987SoilTGAVADRVRAAAKHYPREVRFYDQLQRQAKRLYYVKPANGLAGPWVAVYRL*
Ga0164307_1025944033300012987SoilVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYHVRAGHGLTGPWVSVYRL*
Ga0157372_1122965813300013307Corn RhizosphereRKIGVSDVVVTGAVTDRVLAARDRYPREARFYAELERRAERVYYVQPGGDLAGPWVAVYRLRA*
Ga0157375_1101691213300013308Miscanthus RhizosphereGVSFVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPSVSVYRL*
Ga0157375_1295035613300013308Miscanthus RhizosphereGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL*
Ga0120154_109161413300013501PermafrostRDVVVTGAVTDRVLAARDRYPKEAAFYDDLRTKARRVFYLQPGGQLAGPWVAVYRL*
Ga0120147_109491113300013758PermafrostVLAARDRYPREARFYDALRTQAKRVYHVEPGNGLAGHWVSVYRL*
Ga0134075_1053723113300014154Grasslands SoilGVRVVVATGAVADRVRAAADRYPREVRFYDDLRRRGRLLYRIDAGAGRAGPWVAVYRL*
Ga0163163_1023172713300014325Switchgrass RhizosphereRAEGVRYVFVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYHVRAGHGLTGPWVSVYRL*
Ga0157377_1151012713300014745Miscanthus RhizosphereVLAARDHYPREARFYDQLRTREKRLYYVSAGHGLSGPWVALYQI*
Ga0120193_1008504413300014965TerrestrialVLAARSEYPREARFYDDLRQQARLVKHFDAGDGRGGPWVAVYRLRAEAPPR
Ga0132256_10067365313300015372Arabidopsis RhizosphereAVADRVLAARDRYPREARFYDDLRARTKRIYYVAPGDGRAGPWVAIYRL*
Ga0132255_10451851023300015374Arabidopsis RhizosphereVVTGAVTDRVLAARSDYPREARFYDDLRQQGRRAFYLQPGDDRAGPWVAVYRL*
Ga0184605_1000231713300018027Groundwater SedimentVTGAVTDRVLAARDRYPREAAFYDDLHTKARRVFYLAPGRGLAGPWVAVYRLGA
Ga0184608_1008079133300018028Groundwater SedimentLGSRDVVVTGAVTDRVLAARDRYPREAAFYDDLHTKARRVFYLAPGRGLAGPWVAVYRLG
Ga0187788_1013373033300018032Tropical PeatlandVTGAVADRVLAARSSYPREARFYDRLRTQARTVYHLEPTHGLTGPWVTLYRL
Ga0184618_1013935813300018071Groundwater SedimentVTDRVLAARSDYPREARFYDDLRTKARRAFYLAPGGDRAGPWVAVYRL
Ga0184618_1015803723300018071Groundwater SedimentAARDHYPREARFYDDLRSRAKRVYYLEPGDSLAGPWVAVYRLAT
Ga0066655_1022319933300018431Grasslands SoilVRVVVATGAVADRVRAAADRYPREVRFYDDLRRRGRLLYRVDAGAGRAGPWVAVYRL
Ga0066662_1005323543300018468Grasslands SoilVATGAVADRVRAAADRYPREVRFYDDLRRRGRLLYRIDAGAGRAGPWVAVYRL
Ga0193723_110741913300019879SoilVLAARDHYPREARFYDDLRSRTKRVYYLEPGGDLAGPWVAVYRLRA
Ga0193697_104664023300020005SoilTDRVLAARDRYPREARFYDDLESRAQRVYYVEPGGDLAGPWVAVYRLRA
Ga0193735_113126623300020006SoilTDRVLAARDRYPREARFYDELERRAQRVYYVEPGGDLAGPWVAVYRLRA
Ga0193695_111192913300021418SoilAVTDRVLAARDRYPREAAFYDDLRAKARRVFYLQAGGDLAGPWVAVYRL
Ga0247793_107170923300023066SoilGRLRAEGVRYVLVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0207663_1005722053300025916Corn, Switchgrass And Miscanthus RhizosphereDRVLAARDRYPREARFYDELERRAERVYYVQPGGDLAGPWVAVYRLRA
Ga0207663_1088951833300025916Corn, Switchgrass And Miscanthus RhizosphereVLVTGAVEDRVLAARDRYPREARFDDQLRKQAKRIYELRAGGALTGPWVAVYRL
Ga0207662_1104908923300025918Switchgrass RhizosphereLGIRDVVVTGAVTDRVLAARDRYPREAAFYDRLRTNSRRVFYLTPGGEFAGPWVAVYRL
Ga0207646_1193106823300025922Corn, Switchgrass And Miscanthus RhizosphereVLAARDRYPREARFYDDVRLQAKRVYHVQPGHGLAGPWVSVYRL
Ga0207659_1065503123300025926Miscanthus RhizosphereRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVQAGHGLTGPWVSVYRL
Ga0207687_1161561213300025927Miscanthus RhizosphereARLRRGGVRYALVTGAVADRVLAARDHYPREARFYDQLRTREKRLYYVSAGHGLSGPWVALYQI
Ga0207668_1019049713300025972Switchgrass RhizosphereAVTDLVLAARDRYPREARFYDELERRAERVYYVQPGGDLAGPWVAVYRLRA
Ga0207675_10068627113300026118Switchgrass RhizosphereVTGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL
Ga0207698_1168389423300026142Corn RhizosphereVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL
Ga0209803_124235613300026332SoilTDRVLDARSDYPREARFYDQLGARAKRIYYLQPGDDRAGPWVAVYRLPT
Ga0247822_1061039713300028592SoilVTGTIADRVLLARDRYPREARFYDELRTRVKRVYHVEAGHGLTGPWVSVYRL
Ga0307291_120365223300028707SoilAVTDRVLAARDHYPREARFYDDLRTHTKRVYYLEPGQDLAGPWVAVYRLGA
Ga0307279_1005396423300028709SoilRDVVVTGAVTDRVLAARDRYPRESRFYDDLRARAKRVYYVRPGGKLAGPWVAVYRLRT
Ga0307307_1008239923300028718SoilGAVTDRVLAARDHYPREARFYDDLRSRAKRVYYLEPGDSLAGPWVAVYRLAT
Ga0307320_1037595123300028771SoilEGVGYALVTGAVADRVLAARDRYPREARFYDALRTQAKRVYHVEPGHGLAGPWVSVYRL
Ga0307282_1066657313300028784SoilGAIADRVLAARDRYPREARFYDALRTQAKRVYHVQPGHGLAGPWVSVYRL
Ga0307323_1018105513300028787SoilRVLAARDHYPREARFYDDLRSRAKRVYYLEPGDSLAGPWVAVYRLAT
Ga0307287_1007927533300028796SoilLRKIGVRDVVVTGAVTDRVLAARDRYPREARFYDELERRAQRVYYVEPGGDLAGPWVAVYRLRA
Ga0307284_1002893533300028799SoilRLGIHDVVVTGAVTDRVLAARDRYPREAAFYDDLRTKARRVFYLQAGGDLAGPWVAVYRL
Ga0307503_1057569623300028802SoilADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL
Ga0307292_1031096823300028811SoilVVTGAVTDRVLAARDHYPREARFYDDLRSRAKRVYYLEPGDSLAGPWVAVYRLAT
Ga0307292_1042921613300028811SoilLRRLGIRNVMVTGAVTDRVLAARDRYPREAAFYDELRAKARRVLYVRPGGNLAGPWVAVYRL
Ga0307310_1000099213300028824SoilARDRYPREAAFYDDLHTKARRVFYLAPGRGLAGPWVAVYRLGA
Ga0307289_1046275923300028875SoilSGAVVDRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0247826_1138099023300030336SoilEGVDYVLVTGAVADRVLAARSRYPREARFYDQLSTRARAVYHLDPAHGLTGPWVTLYRL
Ga0307408_10078385023300031548RhizosphereLAARDRYPRDASFYDDLRADTRRVFYVEGGDGLAGPWVALYRL
Ga0307407_1051623613300031903RhizosphereVTGAVADRVLAARDRYPRDASFYDDLRADTRRVFYLEGGDGLAGPWVALYRL
Ga0307409_10034373213300031995RhizosphereLGAGYVVVTGAVADRVLAARERYPAEARFYTELEASAARVFRADPGGDLAGPWVAVYRL
Ga0307416_10025762513300032002RhizosphereADRVLAARDRYPRDARFYDDLRANAKRVLYVVPGDGLTGPWVALYRL
Ga0318563_1070717813300032009SoilVEDRVLAARDHYPREARFDDQLRTRAKRIYELRAGGDLTGPWVAVYRL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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