Metagenome / Metatranscriptome Family F081848

Basic Information
Family ID	F081848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	53 residues
Representative Sequence	MIGEVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTTLRVMISQ
Number of Associated Samples	14
Number of Associated Scaffolds	74

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.93 %
% of genes near scaffold ends (potentially truncated)	31.58 %
% of genes from short scaffolds (< 2000 bps)	90.35 %
Associated GOLD sequencing projects	9
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (78.070 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (63.158 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.32% β-sheet: 0.00% Coil/Unstructured: 45.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 74 Family Scaffolds
PF01541	GIY-YIG	8.11
PF12950	TaqI_C	4.05
PF00903	Glyoxalase	2.70
PF07669	Eco57I	2.70
PF13588	HSDR_N_2	1.35

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
All Organisms	root	All Organisms	21.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
cellular organisms	root	All Organisms → cellular organisms	21.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	12.28 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	2.63 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	2.63 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2.63 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	2.63 %
unclassified Veillonellaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → unclassified Veillonellaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	2.63 %
Veillonellaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → unclassified Veillonellaceae → Veillonellaceae bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003411\|JGI25911J50253_10131507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	732	Open in IMG/M
3300003411\|JGI25911J50253_10223773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	513	Open in IMG/M
3300003616\|JGI25928J51866_1015006	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300003616\|JGI25928J51866_1015006	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300003616\|JGI25928J51866_1018696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1935	Open in IMG/M
3300003616\|JGI25928J51866_1037891	Not Available	1214	Open in IMG/M
3300003616\|JGI25928J51866_1037891	Not Available	1214	Open in IMG/M
3300003616\|JGI25928J51866_1037891	Not Available	1214	Open in IMG/M
3300003616\|JGI25928J51866_1037891	Not Available	1214	Open in IMG/M
3300003616\|JGI25928J51866_1042330	Not Available	1124	Open in IMG/M
3300003616\|JGI25928J51866_1042330	Not Available	1124	Open in IMG/M
3300003616\|JGI25928J51866_1042330	Not Available	1124	Open in IMG/M
3300003616\|JGI25928J51866_1043582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1102	Open in IMG/M
3300003616\|JGI25928J51866_1043582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1102	Open in IMG/M
3300003616\|JGI25928J51866_1050484	Not Available	997	Open in IMG/M
3300003616\|JGI25928J51866_1050484	Not Available	997	Open in IMG/M
3300003616\|JGI25928J51866_1050484	Not Available	997	Open in IMG/M
3300003616\|JGI25928J51866_1050484	Not Available	997	Open in IMG/M
3300003616\|JGI25928J51866_1073232	Not Available	768	Open in IMG/M
3300003616\|JGI25928J51866_1073232	Not Available	768	Open in IMG/M
3300003616\|JGI25928J51866_1081659	Not Available	712	Open in IMG/M
3300003616\|JGI25928J51866_1081659	Not Available	712	Open in IMG/M
3300003616\|JGI25928J51866_1081659	Not Available	712	Open in IMG/M
3300003616\|JGI25928J51866_1081659	Not Available	712	Open in IMG/M
3300003616\|JGI25928J51866_1083194	Not Available	703	Open in IMG/M
3300003616\|JGI25928J51866_1085690	Not Available	690	Open in IMG/M
3300003616\|JGI25928J51866_1085690	Not Available	690	Open in IMG/M
3300003616\|JGI25928J51866_1085690	Not Available	690	Open in IMG/M
3300003616\|JGI25928J51866_1090509	Not Available	664	Open in IMG/M
3300003616\|JGI25928J51866_1090509	Not Available	664	Open in IMG/M
3300003616\|JGI25928J51866_1090509	Not Available	664	Open in IMG/M
3300003616\|JGI25928J51866_1102817	Not Available	608	Open in IMG/M
3300003616\|JGI25928J51866_1106081	Not Available	596	Open in IMG/M
3300003616\|JGI25928J51866_1106081	Not Available	596	Open in IMG/M
3300003616\|JGI25928J51866_1106081	Not Available	596	Open in IMG/M
3300003616\|JGI25928J51866_1111414	Not Available	576	Open in IMG/M
3300003616\|JGI25928J51866_1111414	Not Available	576	Open in IMG/M
3300003616\|JGI25928J51866_1123885	Not Available	537	Open in IMG/M
3300003616\|JGI25928J51866_1130019	Not Available	521	Open in IMG/M
3300003616\|JGI25928J51866_1130019	Not Available	521	Open in IMG/M
3300003616\|JGI25928J51866_1130019	Not Available	521	Open in IMG/M
3300003616\|JGI25928J51866_1130274	Not Available	521	Open in IMG/M
3300003616\|JGI25928J51866_1130274	Not Available	521	Open in IMG/M
3300004768\|Ga0007762_1657630	Not Available	728	Open in IMG/M
3300005580\|Ga0049083_10110412	Not Available	950	Open in IMG/M
3300005580\|Ga0049083_10209148	Not Available	662	Open in IMG/M
3300005580\|Ga0049083_10243256	Not Available	606	Open in IMG/M
3300005583\|Ga0049085_10044141	Not Available	1619	Open in IMG/M
3300005583\|Ga0049085_10044141	Not Available	1619	Open in IMG/M
3300005583\|Ga0049085_10056451	Not Available	1404	Open in IMG/M
3300005583\|Ga0049085_10114588	Not Available	923	Open in IMG/M
3300005583\|Ga0049085_10171631	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005583\|Ga0049085_10216009	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005583\|Ga0049085_10232528	Not Available	606	Open in IMG/M
3300005583\|Ga0049085_10254351	Not Available	575	Open in IMG/M
3300005584\|Ga0049082_10220238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	646	Open in IMG/M
3300005585\|Ga0049084_10022233	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300005585\|Ga0049084_10022233	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300005585\|Ga0049084_10033379	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300005585\|Ga0049084_10172811	Not Available	746	Open in IMG/M
3300005585\|Ga0049084_10174758	Not Available	741	Open in IMG/M
3300005585\|Ga0049084_10183626	Not Available	719	Open in IMG/M
3300005585\|Ga0049084_10183626	Not Available	719	Open in IMG/M
3300005585\|Ga0049084_10198188	Not Available	686	Open in IMG/M
3300005585\|Ga0049084_10200148	Not Available	682	Open in IMG/M
3300005585\|Ga0049084_10227408	Not Available	631	Open in IMG/M
3300005585\|Ga0049084_10239688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	611	Open in IMG/M
3300005585\|Ga0049084_10246168	Not Available	601	Open in IMG/M
3300005585\|Ga0049084_10263208	Not Available	577	Open in IMG/M
3300005585\|Ga0049084_10325600	Not Available	507	Open in IMG/M
3300005585\|Ga0049084_10325600	Not Available	507	Open in IMG/M
3300027621\|Ga0208951_1175784	Not Available	546	Open in IMG/M
3300027627\|Ga0208942_1024390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1943	Open in IMG/M
3300027627\|Ga0208942_1066991	Not Available	1070	Open in IMG/M
3300027627\|Ga0208942_1066991	Not Available	1070	Open in IMG/M
3300027627\|Ga0208942_1066991	Not Available	1070	Open in IMG/M
3300027627\|Ga0208942_1083121	Not Available	932	Open in IMG/M
3300027627\|Ga0208942_1083121	Not Available	932	Open in IMG/M
3300027649\|Ga0208960_1011209	Not Available	3850	Open in IMG/M
3300027649\|Ga0208960_1011209	Not Available	3850	Open in IMG/M
3300027649\|Ga0208960_1011209	Not Available	3850	Open in IMG/M
3300027649\|Ga0208960_1078529	Not Available	947	Open in IMG/M
3300027649\|Ga0208960_1086212	Not Available	881	Open in IMG/M
3300027649\|Ga0208960_1089012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → unclassified Veillonellaceae → Veillonellaceae bacterium	860	Open in IMG/M
3300027649\|Ga0208960_1111250	Not Available	727	Open in IMG/M
3300027649\|Ga0208960_1178826	Not Available	506	Open in IMG/M
3300027688\|Ga0209553_1012970	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300027688\|Ga0209553_1012970	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300027688\|Ga0209553_1031453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2202	Open in IMG/M
3300027688\|Ga0209553_1031453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2202	Open in IMG/M
3300027688\|Ga0209553_1064820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1392	Open in IMG/M
3300027688\|Ga0209553_1064820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1392	Open in IMG/M
3300027688\|Ga0209553_1064820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1392	Open in IMG/M
3300027688\|Ga0209553_1108701	Not Available	991	Open in IMG/M
3300027688\|Ga0209553_1108701	Not Available	991	Open in IMG/M
3300027688\|Ga0209553_1114702	Not Available	955	Open in IMG/M
3300027688\|Ga0209553_1131288	Not Available	871	Open in IMG/M
3300027688\|Ga0209553_1159214	Not Available	762	Open in IMG/M
3300027688\|Ga0209553_1164495	Not Available	745	Open in IMG/M
3300027688\|Ga0209553_1170024	Not Available	728	Open in IMG/M
3300027688\|Ga0209553_1170024	Not Available	728	Open in IMG/M
3300027688\|Ga0209553_1193555	Not Available	665	Open in IMG/M
3300027688\|Ga0209553_1201903	Not Available	646	Open in IMG/M
3300027688\|Ga0209553_1203291	Not Available	643	Open in IMG/M
3300027688\|Ga0209553_1211599	Not Available	625	Open in IMG/M
3300027688\|Ga0209553_1211599	Not Available	625	Open in IMG/M
3300027688\|Ga0209553_1216075	Not Available	616	Open in IMG/M
3300027688\|Ga0209553_1276146	Not Available	517	Open in IMG/M
3300027688\|Ga0209553_1277416	Not Available	515	Open in IMG/M
3300027732\|Ga0209442_1228011	Not Available	676	Open in IMG/M
3300027744\|Ga0209355_1068464	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300027744\|Ga0209355_1208365	Not Available	794	Open in IMG/M
3300027744\|Ga0209355_1302059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	607	Open in IMG/M
3300027772\|Ga0209768_10296174	Not Available	682	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	63.16%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	36.84%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004768	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25911J50253_101315071	3300003411	Freshwater Lake	MIGGVLRSAQNDIGCDEYTMKWDVALSVSEGPLTWPVGFFAPLRTTLRVMSSQ*
JGI25911J50253_102237731	3300003411	Freshwater Lake	MIGGVLRSAQNDIACDEFTVKCDVALSVSEGPLTRPVRFFAPLRTTLRVMSSQ*
JGI25928J51866_10150063	3300003616	Freshwater Lake	MGGGVLRSAQNDIAFGELKMKCDVALSVSERHLTWPVRFFAPLRTTLRMMSSQ*
JGI25928J51866_10150064	3300003616	Freshwater Lake	MIGVVPRSAQNDIACDEFAMKCDVALSVSEGPLTWPVGFFAPLRTTLRLVSSQ*
JGI25928J51866_10186964	3300003616	Freshwater Lake	DMAGGVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVRFFAPLRTTLRVMSSE*
JGI25928J51866_10378912	3300003616	Freshwater Lake	MAGEVLRSAQDDIACDEFTVKCDVALSVSEGPLTWPVGFFAPLRTTLRVMSTQ*
JGI25928J51866_10378913	3300003616	Freshwater Lake	MAGGVLRSAQNDIACDEYTMKCDVALSVSEGPLAWPVRFFAPLRTTLCVMISQ*
JGI25928J51866_10378914	3300003616	Freshwater Lake	MAGEVLRSAQNDIVCDDFTMKCDVILSVSEGSLTRPVRFFAPLRTTLRVMSSQ*
JGI25928J51866_10378915	3300003616	Freshwater Lake	MASDMAGEVLRSAQNDIAYDEFAMKCDVALSVCEGPLTWPVGFFAPLRTRLGVRSSQ*
JGI25928J51866_10423301	3300003616	Freshwater Lake	MIGGVLRSAQNDIGCDEYTMKWDVALSVSEGPLTWPVGFFAPLRTTLRVMSTQ*
JGI25928J51866_10423302	3300003616	Freshwater Lake	MIGGVLRSAQNDIAFDEFTMKCDVALSVSEGPLTWPVRFFAPLRTTSRIVSSR*
JGI25928J51866_10423304	3300003616	Freshwater Lake	MAGEVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTTSGVMSTQ*
JGI25928J51866_10435822	3300003616	Freshwater Lake	MIGGVLRSAQNDTACDEFTIKCDVALSVSEGSLTCSVRFFAPLRTTLRVMSSK*
JGI25928J51866_10435823	3300003616	Freshwater Lake	MFGEVLRSAQNDIACDEFKMKCDVALSFSEGSLTLSVGFFAPLRTTLRVMR*
JGI25928J51866_10504841	3300003616	Freshwater Lake	MAGGVLCSAQNDIAYDEFTAKCDVALSVNEVSLTWPVRLFAPLRTTLRVMSSQ*
JGI25928J51866_10504842	3300003616	Freshwater Lake	MAGGVLRSAQNDIACDEFAMKCDVGLFVSAGSLTWPVGFFAPLTTTLRVMSSQ*
JGI25928J51866_10504843	3300003616	Freshwater Lake	MIGGVLRSAQNDTACDEFTMKCDVGLFVSDGSLTWPVGFFAPLRTTLRVMSSQ*
JGI25928J51866_10504844	3300003616	Freshwater Lake	MAGEVLRSAQNDIAYDEFTMKFDVALSVSDGSLAWPVGFFAPLRTTLRMVSSQ*
JGI25928J51866_10732322	3300003616	Freshwater Lake	MAGEVLRSAQNAIAYDVFRMKCDVGLSVSEGPLTWLVRFFAPLRTTLRVMSSQ*
JGI25928J51866_10732323	3300003616	Freshwater Lake	MAGEVLRSAQNDIACDEFTVKCDVALSVGEGPLTWLVRFFAPLRTTLRLVSAK*
JGI25928J51866_10816591	3300003616	Freshwater Lake	RRASDMAGGVLGSAQNDIACDELTAKCDIALSVSDGSLVWSVRFFASHRTTLRVVSSQRNVMSPLALAKGL*
JGI25928J51866_10816592	3300003616	Freshwater Lake	MAGEVLRFAHNDIACDEFTMKCDVALSVSEGPLAWPVXFFALLRRTLRVMSSQ*
JGI25928J51866_10816593	3300003616	Freshwater Lake	MAGXVLRSAQKDIACDEFAMKCDVALSVSEGPLTWLVRFFAPLRTPLRMMSSQ*
JGI25928J51866_10816594	3300003616	Freshwater Lake	MAGEVLRSAQNAIAYDEFAMKCDVALSVSEGPLKSRVGFFASPRTTLRMMSSQ*
JGI25928J51866_10831941	3300003616	Freshwater Lake	MAGEVLRSAQNDIVCDDFKMKCDVALSVSEMSLTWPVRFFAPLRTTLRVMISQ*
JGI25928J51866_10856902	3300003616	Freshwater Lake	MIGEVLCSAQNDIACDGFAMKCDVALTVSEESLTLLVGFFAPLRTTLRMMSSR*
JGI25928J51866_10856903	3300003616	Freshwater Lake	MIGEVLRSAQNDIACDEFTMKCDVALSVSEGSLTWLVGFFAPLRTTLRVMSSK*
JGI25928J51866_10856904	3300003616	Freshwater Lake	MAGGVLRSAQNDIACYEFKMKCIVALSVSEGPLTWPVGFFAPLRTILRVMSSE*
JGI25928J51866_10905091	3300003616	Freshwater Lake	MAGGVLRSAQNDIAYDEFKMKCDVALSVSEGSLTWPVGFFAPLRTTLRMMSSQ*
JGI25928J51866_10905092	3300003616	Freshwater Lake	MAGGVLRSAQNDIAYDEFTMKCDVALSISEWLLSWPVRFFAPLRTTLRVMISQ*
JGI25928J51866_10905093	3300003616	Freshwater Lake	MXSXMXGEVLRSAQNDIGCDEFKMKCDVALSVSEGPLTRPVRFFALLRTTLCVMSSE*
JGI25928J51866_11028171	3300003616	Freshwater Lake	MAGEVLRSAQNDIACDEVTMKCYVALSASEWSLTWPVRFFAPLRTTLRVMSSE*
JGI25928J51866_11060811	3300003616	Freshwater Lake	MAGGVLRSAQNDIAYDEFKMKCDVALSVSEGSLTWPVGFFAPLRTTLRMM
JGI25928J51866_11060812	3300003616	Freshwater Lake	MAGEVFRSAQNDIGCDEYTMKWDVALSVRHGSLALPVGFFVPLRTTLRVMSSQRNVMSLRALAKGL*
JGI25928J51866_11060813	3300003616	Freshwater Lake	RASDMAGEVLRSAQNDIVYDEFNMKCDVALSASEGPLTWPVRFFAPLRTTLGVMSTQ*
JGI25928J51866_11114141	3300003616	Freshwater Lake	VLRSAQNDIACDEFTVKCDVALSVSERSLTWPVMFFASLRTTLRVMSSK*
JGI25928J51866_11114142	3300003616	Freshwater Lake	MAGAVLRSAQNDIACDEFTVKCDVALSVSERSLTWPVRFFAPPRTTLRVMSSQ*
JGI25928J51866_11238851	3300003616	Freshwater Lake	GGVLRSAQTDIACDEFKMKCDVALSVSEMSLTLSVSFFPPLRTTLRMMSSQ*
JGI25928J51866_11300191	3300003616	Freshwater Lake	MAGEFLRSAQNDIACDEFTVKCGVALSVSEESLSWPVGFFAPLRTTL
JGI25928J51866_11300192	3300003616	Freshwater Lake	MAGGVLRSAQNAIACDAFTMKCDVGLSVSEGPLTWLVSFFAPLRTTLRVMSSQ*
JGI25928J51866_11300193	3300003616	Freshwater Lake	AQNDIACDEFKMKCDVALSVSEVPLAXXVXFXAPLRTTLRVMSSR*
JGI25928J51866_11302741	3300003616	Freshwater Lake	DIACDEFTAKCDVALSVSEGSLTWPVRFFAPLRTTLRVMSSQ*
JGI25928J51866_11302742	3300003616	Freshwater Lake	MIGGVLRSAQNDIACDEFTVKCDVALSVSEGPLTRPVGFFAPLRKTLRMMSSQ*
Ga0007762_16576302	3300004768	Freshwater Lake	MVGGVLRSAQNDIGCEEFTMKCDVALSVSEGSLTWPVRFFAPL*
Ga0049083_101104122	3300005580	Freshwater Lentic	MAGEVLRSAQNDIVYDEFNMKCDVALSVSEGPLTWLVRFFAPLRTTLRVISSQ*
Ga0049083_102091481	3300005580	Freshwater Lentic	MASEVLRSAQNDIVYDEFTMKCDVALSVDEGPLTWPVGFFAPLRTTLRVMISQ*
Ga0049083_102432561	3300005580	Freshwater Lentic	MAGEVLRSAQNAIAYDVFTAKCDVALSVSEMSLVWPVGFFAPLRTTLRVMTSR*
Ga0049085_100441412	3300005583	Freshwater Lentic	MIGEVLRSAQNDIARDEFTMKCDVALSVSEVPLTWLVGLFAPLRTTLRMVSSQ*
Ga0049085_100441414	3300005583	Freshwater Lentic	MIGGVLLSAQNDIACGEFTMKCDVALSVSEMSLTWTVRFFAPLRTTLRVMSSQRNVMSL*
Ga0049085_100564512	3300005583	Freshwater Lentic	MAGGILRSAQNDIGCDEYTMKWDVALSVSEGPLTWPVGFFAPLRTTLRVMSSQ*
Ga0049085_101145882	3300005583	Freshwater Lentic	MAGEVLRSAQNDIACDEFTMKCDVALSVSEGFLTWPVGFFAPLRTTLRMMSSRLNVMLP*
Ga0049085_101716312	3300005583	Freshwater Lentic	MAGEVLRSAHNDIACDEFTMKCDVALGVSEVPLTWLVGFFASLRTTLRVMSSQRNVMSP*
Ga0049085_102160091	3300005583	Freshwater Lentic	MIGGILRSAENDIARDEFLMKCDVALSVNEVSLTWPVRLFAPLRTTLRVMSSQ*
Ga0049085_102325281	3300005583	Freshwater Lentic	VSDMAGEVLRSAQNDIACDEFTAKCDVAQSVSEGPLTWPVGFFAPLRTTLRVMSSQ*
Ga0049085_102543512	3300005583	Freshwater Lentic	MAGEVLRSAQNDIAFGEFKMKCDVALSVSDGSLAWPVGFFAPLRTTLCMMSSI*
Ga0049082_102202381	3300005584	Freshwater Lentic	MAGEVLRSAQNDIAFGEFKMKCDVALSVRHGSLAWPVGFFAPLRTTLRVMSSK*
Ga0049084_100222331	3300005585	Freshwater Lentic	MFGEVLRSAQNDIACDEFAMNCDVALSVSDGFLTWPVGFFAPLRTTLRVVSSQ*
Ga0049084_100222332	3300005585	Freshwater Lentic	MIGGVLRSAQNDIACDEFTMICDVALSGSEGCLTCSVRFFAPLRTTLRAMSSQ*
Ga0049084_100333792	3300005585	Freshwater Lentic	MAGEVLRSAQNDIARDEFTVKCDVALSVSEGPLTWPVGFFAPLRTTLR
Ga0049084_101728113	3300005585	Freshwater Lentic	MIGGVLCSAQNDIAFGEFKMKCDVALSVSEGPLTWLVRFFAPLRTTL
Ga0049084_101747581	3300005585	Freshwater Lentic	MIGEVLRSAQNDIACDEFTMKCDVALSVSEGSLTWLVGFFAPLRTTLRVMSSQ*
Ga0049084_101836261	3300005585	Freshwater Lentic	VLRSAQNDIACDEFTMKCDVALSVSEGSLTLPVRFFAPLRTTLRVMSSK*
Ga0049084_101836262	3300005585	Freshwater Lentic	MAGEVLRSAQNDIACDEFAMKCDVALSVGEVSLTWPVRFFAPLTTTLRVMSSE*
Ga0049084_101981883	3300005585	Freshwater Lentic	MASVMAGEVLRSAQNDIAYDEFAMKCDVALSVSEGSLTWPVRFFCPLRTTLRVMISQ*
Ga0049084_102001481	3300005585	Freshwater Lentic	MAGGVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTT
Ga0049084_102274081	3300005585	Freshwater Lentic	NDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLTTTLRVMISQ*
Ga0049084_102396882	3300005585	Freshwater Lentic	MASEVLRSAQNDIVYDEFTMKCDVALSVDEGPLTWPVRFFAPLRTTLRVVSSE*
Ga0049084_102461682	3300005585	Freshwater Lentic	SDMAGEVLRSAQNDIAYDEFAMKCDVALSVCEGPLTWPVGFFAPLRTRLGVRSSQ*
Ga0049084_102632081	3300005585	Freshwater Lentic	SDMIGGVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFSPLRTTLRVMSSQ*
Ga0049084_103256001	3300005585	Freshwater Lentic	MIGGVLRSAQNDIAFGEFTMKCDVALSVSEGPLTWPVRFFAPLTTTLRVMS
Ga0049084_103256002	3300005585	Freshwater Lentic	MASDMAGEVLRPAQNDIADDEFKMKCDVALSVSEGPLTWPVGFFAPLSTTLRMMSSR*
Ga0208951_11757841	3300027621	Freshwater Lentic	MVSAMIGEVLRSAHNDIVYDEFAMKCDVALSVSEWPLTWPVRFFAPLRTTLRVMSSN
Ga0208942_10243903	3300027627	Freshwater Lentic	MAGEVLRSAHNDIACDEFTMKCDVALGVSEVPLTWLVGFFASLRTTLRVMSSQRNVMSP
Ga0208942_10669911	3300027627	Freshwater Lentic	NDIGCDEYTMKCDVALSVSEGPLTWPVRFFAPLRTTLRVMSSQ
Ga0208942_10669912	3300027627	Freshwater Lentic	MAGEVLRSAQNDIACDEFTMKCDVALSVSDGSLSWPVGFFGPLRTTLRVMSSK
Ga0208942_10669914	3300027627	Freshwater Lentic	MIGGVLVSAQNDIACDEFTAKCDVALSVSEVPLKWRVRFFASLRMTLRVMCSQ
Ga0208942_10831212	3300027627	Freshwater Lentic	MAGGVLRSAQNAIAYDVFTMKCDVGLSVSEGPLTWLVSFFAPLRTTLRVMSSQ
Ga0208942_10831213	3300027627	Freshwater Lentic	MIGEVLRSAQNDIARDEFTMKCDVALSVSEVPLTWLVGLFAPLRTTLRMVSSQ
Ga0208960_10112091	3300027649	Freshwater Lentic	MFGEVLRSAQNDIACDEFAMNCDVALSVSDGFLTWPVGFFAPLRTTLRVVSSQ
Ga0208960_10112092	3300027649	Freshwater Lentic	MIGGVLRSAQNDIACDEFTMICDVALSGSEGCLTCSVRFFAPLRTTLRAMSSQ
Ga0208960_10112095	3300027649	Freshwater Lentic	MVGGVLRSAQNDIGCEEFTMKCDVALSVSEGSLTWPVRFFAPL
Ga0208960_10785291	3300027649	Freshwater Lentic	MFGEVLRSAQNDIACDEFKMKCDVALSFSEGSLTLSVGFFAPLRTTLRVMR
Ga0208960_10862121	3300027649	Freshwater Lentic	DIACDEFKMKCDVALSVSEGPLTWPVRFFAPLRATLRVMSSN
Ga0208960_10890122	3300027649	Freshwater Lentic	MAGEVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLTTTLRVMISQ
Ga0208960_11112501	3300027649	Freshwater Lentic	ERRASDMAGEVLRSAQNDIVCDEFTMKCDVILSVSEGPLTRPVRFFAPLRTTLRAMSSQRNVMSL
Ga0208960_11788262	3300027649	Freshwater Lentic	MIGAVLRSAQNDIACDEYTMKCDVALSVSDGSLTWPVGFFAPLRTTLRVM
Ga0209553_10129705	3300027688	Freshwater Lake	MAGEVLRSAQDDIACDEFTVKCDVALSVSEGPLTWPVGFFAPLRTTLRVMSTQ
Ga0209553_10129706	3300027688	Freshwater Lake	MAGEVLRSAQNDIVCDDFTMKCDVILSVSEGSLTRPVRFFAPLRTTLRVMSSQ
Ga0209553_10314532	3300027688	Freshwater Lake	MIGGVLRSAQNDIGCDEYTMKWDVALSVSEGPLTWPVGFFAPLRTTLRVMSTQ
Ga0209553_10314534	3300027688	Freshwater Lake	MAGGILRSAQNDIGCDEYTMKWDVALSVSEGPLTWPVGFFAPLRTTLRVMSSQ
Ga0209553_10648202	3300027688	Freshwater Lake	MAGGVLCSAQNDIAYDEFTAKCDVALSVNEVSLTWPVRLFAPLRTTLRVMSSQ
Ga0209553_10648203	3300027688	Freshwater Lake	MIGGVLRSAQNDTACDEFTMKCDVGLFVSDGSLTWPVGFFAPLRTTLRVMSSQ
Ga0209553_10648204	3300027688	Freshwater Lake	MAGEVLRSAQNDIAYDEFTMKFDVALSVSDGSLAWPVGFFAPLRTTLRMVSSQ
Ga0209553_11087012	3300027688	Freshwater Lake	MAGGVLLSAQNDIACDEFNMKCDVAVSVSECPLTWPVRFFASHRTTLRVVSSQRNVMSPLALAKGL
Ga0209553_11087013	3300027688	Freshwater Lake	MAGEVLRFAHNDIACDEFTMKCDVALSVSEGPLAWPVGFFALLRRTLRVMSSQ
Ga0209553_11147023	3300027688	Freshwater Lake	MIGEVLRSAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTTLRVMISQ
Ga0209553_11312881	3300027688	Freshwater Lake	MMSGMIGEVLRSAQNDIGCDEFKMKCDVALSVSEGPLTRPVRFFALLRTTLCVMSSE
Ga0209553_11592141	3300027688	Freshwater Lake	NDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTTLRVMSSQ
Ga0209553_11644952	3300027688	Freshwater Lake	MIGAVLRSAQNDIACDEFKMKCDVALSVGEVPLTWLVGFFAPLRTTLRAMSSH
Ga0209553_11700242	3300027688	Freshwater Lake	MAGEVFRSAQNDIGCDEYTMKWDVALSVRHGSLALPVGFFVPLRTTLRVMSSQRNVMSLRALAKGL
Ga0209553_11700243	3300027688	Freshwater Lake	MAGEVLRSAQNDIACDEFTMKCDVALSVSEGFLTWPVGFFAPLRTTLRVMISQ
Ga0209553_11935551	3300027688	Freshwater Lake	MAGEVLRCAQNDIACDEFTMKCDVALSVSEWPLTWPVRFFAPLRTTLRMM
Ga0209553_12019031	3300027688	Freshwater Lake	EVLRSAQNDIVYDEFTMKCDVALSVDEGPLTWPVRFFAPLRTPLRMMCSQRNVMSP
Ga0209553_12032912	3300027688	Freshwater Lake	MAGGVLGSAQNDIACDELTAKCDVALSVSDGSLVWSVRFFASHRTTLRVVSSQRNVMSPLALAKG
Ga0209553_12115991	3300027688	Freshwater Lake	DMASEVLRSAQNDTACDEFNMKCDVALSVSEGSLTWPVGFFAPLRTTLRMMSSK
Ga0209553_12115992	3300027688	Freshwater Lake	MASEVLRSAQNDIVYDEFTMKCDVALSVDEGPLTWPVGFFAPLRTTLRVMSSQ
Ga0209553_12160751	3300027688	Freshwater Lake	DMAGAVLRSAQNDIACDEFTVKCDVALSVSERSLTWPVMFFASLRTTLRVMSSK
Ga0209553_12761462	3300027688	Freshwater Lake	MAGEVLRSAQNDIAFGEFKMKCDVALSVRHGSLAWPVGFFAPL
Ga0209553_12774161	3300027688	Freshwater Lake	GMIGEVLRSAQNDIACDEFKMKCDVALSVSEVPLAWPVGFLAPLRTTLRVMSSR
Ga0209442_12280113	3300027732	Freshwater Lake	MAGGVLRSAQNDIACNEFTVKCDVALSVSEGPLTWPVRFFAPLRTTLRVMSSQ
Ga0209355_10684644	3300027744	Freshwater Lake	MIGGVLRSAQNDIACDEFTMICDVALSGSEGCLTCSVRFFAPL
Ga0209355_12083653	3300027744	Freshwater Lake	DMAGGILRSAQNDIARDEFLMKCDVALSVNEVPLTWPVRLFAPLRTTLRMMSSK
Ga0209355_13020592	3300027744	Freshwater Lake	GVLRCAQNDIACDEFTMKCDVALSVSEGPLTWPVGFFAPLRTTLRVMSSQ
Ga0209768_102961741	3300027772	Freshwater Lake	ERRASDMAGEVLRSAQNDIACDEFTMKCDVALSVSEGFLTWPVGFFAPLRTTLRVMISQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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Geographical Distribution

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