NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F081988

Metagenome Family F081988

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081988
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 50 residues
Representative Sequence VLIKDIKEDELGAVFKAYGKTAKDKADKVDKTKLPELLAKEVIIIGLPAVPTL
Number of Associated Samples 26
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 58.41 %
% of genes near scaffold ends (potentially truncated) 17.70 %
% of genes from short scaffolds (< 2000 bps) 53.98 %
Associated GOLD sequencing projects 23
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (70.796 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(60.177 % of family members)
Environment Ontology (ENVO) Unclassified
(63.717 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.248 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.68%    β-sheet: 0.00%    Coil/Unstructured: 54.32%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF03184DDE_1 1.79
PF02104SURF1 0.89
PF02803Thiolase_C 0.89
PF06985HET 0.89
PF01139RtcB 0.89
PF01498HTH_Tnp_Tc3_2 0.89
PF00132Hexapep 0.89
PF00266Aminotran_5 0.89
PF01265Cyto_heme_lyase 0.89
PF00078RVT_1 0.89
PF08450SGL 0.89
PF13424TPR_12 0.89
PF01255Prenyltransf 0.89
PF03124EXS 0.89
PF00627UBA 0.89
PF16073SAT 0.89
PF13843DDE_Tnp_1_7 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 0.89
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 0.89
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.89
COG3346Cytochrome oxidase assembly protein ShyY1Posttranslational modification, protein turnover, chaperones [O] 0.89
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.89
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.80 %
All OrganismsrootAll Organisms29.20 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101427182Not Available586Open in IMG/M
3300002245|JGIcombinedJ26739_101623422Not Available544Open in IMG/M
3300010159|Ga0099796_10160666Not Available890Open in IMG/M
3300012200|Ga0137382_11131337Not Available558Open in IMG/M
3300012200|Ga0137382_11358250Not Available500Open in IMG/M
3300012205|Ga0137362_10608996Not Available941Open in IMG/M
3300012206|Ga0137380_11538573Not Available550Open in IMG/M
3300012208|Ga0137376_10767546Not Available830Open in IMG/M
3300012210|Ga0137378_11449093Not Available599Open in IMG/M
3300012211|Ga0137377_11427508Not Available620Open in IMG/M
3300012357|Ga0137384_11107226Not Available634Open in IMG/M
3300012359|Ga0137385_10992451Not Available693Open in IMG/M
3300012359|Ga0137385_11265494Not Available600Open in IMG/M
3300012359|Ga0137385_11646288Not Available506Open in IMG/M
3300012361|Ga0137360_11425901Not Available596Open in IMG/M
3300012361|Ga0137360_11432349Not Available594Open in IMG/M
3300012924|Ga0137413_11306935Not Available582Open in IMG/M
3300012924|Ga0137413_11323554Not Available579Open in IMG/M
3300012925|Ga0137419_11500841Not Available571Open in IMG/M
3300012930|Ga0137407_11593404Not Available622Open in IMG/M
3300012930|Ga0137407_12324888Not Available512Open in IMG/M
3300015242|Ga0137412_10086381All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli2552Open in IMG/M
3300019789|Ga0137408_1387303Not Available1311Open in IMG/M
3300019890|Ga0193728_1001601All Organisms → cellular organisms → Eukaryota → Opisthokonta11622Open in IMG/M
3300019890|Ga0193728_1006482All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Pleosporaceae → Alternaria → Alternaria sect. Ulocladioides → Alternaria atra5918Open in IMG/M
3300019890|Ga0193728_1007260Not Available5602Open in IMG/M
3300019890|Ga0193728_1010683Not Available4623Open in IMG/M
3300019890|Ga0193728_1012969Not Available4190Open in IMG/M
3300019890|Ga0193728_1017192Not Available3629Open in IMG/M
3300019890|Ga0193728_1024942Not Available2983Open in IMG/M
3300019890|Ga0193728_1027448Not Available2837Open in IMG/M
3300019890|Ga0193728_1044222Not Available2182Open in IMG/M
3300019890|Ga0193728_1049274Not Available2050Open in IMG/M
3300019890|Ga0193728_1063778Not Available1765Open in IMG/M
3300019890|Ga0193728_1114043Not Available1233Open in IMG/M
3300019890|Ga0193728_1182934Not Available895Open in IMG/M
3300019890|Ga0193728_1269040Not Available669Open in IMG/M
3300020140|Ga0179590_1172659Not Available593Open in IMG/M
3300021404|Ga0210389_11166951Not Available594Open in IMG/M
3300024347|Ga0179591_1103164All Organisms → cellular organisms → Eukaryota → Opisthokonta2203Open in IMG/M
3300027895|Ga0209624_10956789Not Available557Open in IMG/M
3300027908|Ga0209006_10452901Not Available1075Open in IMG/M
3300027908|Ga0209006_10850277Not Available736Open in IMG/M
3300027908|Ga0209006_11005777Not Available663Open in IMG/M
3300028794|Ga0307515_10002315Not Available41585Open in IMG/M
3300028794|Ga0307515_10003282All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes34221Open in IMG/M
3300028794|Ga0307515_10003784All Organisms → cellular organisms → Eukaryota → Opisthokonta31675Open in IMG/M
3300028794|Ga0307515_10004929All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae27273Open in IMG/M
3300028794|Ga0307515_10006430All Organisms → cellular organisms → Eukaryota → Opisthokonta23511Open in IMG/M
3300028794|Ga0307515_10007638All Organisms → cellular organisms → Eukaryota → Opisthokonta21331Open in IMG/M
3300028794|Ga0307515_10008092Not Available20602Open in IMG/M
3300028794|Ga0307515_10009623Not Available18654Open in IMG/M
3300028794|Ga0307515_10011789All Organisms → cellular organisms → Eukaryota → Opisthokonta16543Open in IMG/M
3300028794|Ga0307515_10013177All Organisms → cellular organisms → Eukaryota → Opisthokonta15468Open in IMG/M
3300028794|Ga0307515_10013992All Organisms → cellular organisms → Eukaryota → Opisthokonta14928Open in IMG/M
3300028794|Ga0307515_10015126All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes14234Open in IMG/M
3300028794|Ga0307515_10016888All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina13341Open in IMG/M
3300028794|Ga0307515_10016888All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina13341Open in IMG/M
3300028794|Ga0307515_10019809Not Available12069Open in IMG/M
3300028794|Ga0307515_10019901All Organisms → cellular organisms → Eukaryota12032Open in IMG/M
3300028794|Ga0307515_10020934Not Available11625Open in IMG/M
3300028794|Ga0307515_10021405All Organisms → cellular organisms → Eukaryota → Opisthokonta11470Open in IMG/M
3300028794|Ga0307515_10026826All Organisms → cellular organisms → Eukaryota → Opisthokonta9886Open in IMG/M
3300028794|Ga0307515_10030802All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetes incertae sedis → Zopfiaceae → Zopfia → Zopfia rhizophila → Zopfia rhizophila CBS 207.268984Open in IMG/M
3300028794|Ga0307515_10046575Not Available6623Open in IMG/M
3300028794|Ga0307515_10050063Not Available6266Open in IMG/M
3300028794|Ga0307515_10053222All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes5979Open in IMG/M
3300028794|Ga0307515_10068114All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae4896Open in IMG/M
3300028794|Ga0307515_10136994Not Available2654Open in IMG/M
3300028794|Ga0307515_10196767Not Available1905Open in IMG/M
3300028794|Ga0307515_10353713Not Available1114Open in IMG/M
3300031231|Ga0170824_119462550Not Available603Open in IMG/M
3300031838|Ga0307518_10033424Not Available3731Open in IMG/M
3300031838|Ga0307518_10057478All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya2826Open in IMG/M
3300031838|Ga0307518_10060441Not Available2752Open in IMG/M
3300031838|Ga0307518_10071632Not Available2510Open in IMG/M
3300031838|Ga0307518_10077272Not Available2406Open in IMG/M
3300031838|Ga0307518_10131906Not Available1755Open in IMG/M
3300031838|Ga0307518_10149182Not Available1620Open in IMG/M
3300031838|Ga0307518_10149289All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporomycetidae incertae sedis → Gloniaceae → Glonium → Glonium stellatum1619Open in IMG/M
3300031838|Ga0307518_10161335Not Available1540Open in IMG/M
3300031838|Ga0307518_10164721Not Available1519Open in IMG/M
3300031838|Ga0307518_10178200Not Available1440Open in IMG/M
3300031838|Ga0307518_10215287Not Available1260Open in IMG/M
3300031838|Ga0307518_10230009Not Available1201Open in IMG/M
3300031838|Ga0307518_10232108Not Available1193Open in IMG/M
3300031838|Ga0307518_10242775Not Available1153Open in IMG/M
3300031838|Ga0307518_10248790Not Available1132Open in IMG/M
3300031838|Ga0307518_10282661Not Available1025Open in IMG/M
3300031838|Ga0307518_10310060Not Available952Open in IMG/M
3300031838|Ga0307518_10359073Not Available842Open in IMG/M
3300031838|Ga0307518_10359118Not Available842Open in IMG/M
3300031838|Ga0307518_10385808Not Available791Open in IMG/M
3300031838|Ga0307518_10426948Not Available723Open in IMG/M
3300031838|Ga0307518_10515802Not Available608Open in IMG/M
3300031838|Ga0307518_10566726Not Available556Open in IMG/M
3300031838|Ga0307518_10572900Not Available550Open in IMG/M
3300031838|Ga0307518_10631794Not Available501Open in IMG/M
3300033179|Ga0307507_10000100All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes139484Open in IMG/M
3300033179|Ga0307507_10000271All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina101985Open in IMG/M
3300033179|Ga0307507_10000738All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina71975Open in IMG/M
3300033179|Ga0307507_10000877All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina66823Open in IMG/M
3300033179|Ga0307507_10002402All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae39535Open in IMG/M
3300033179|Ga0307507_10004107All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes26538Open in IMG/M
3300033179|Ga0307507_10004140All Organisms → cellular organisms → Eukaryota → Opisthokonta26341Open in IMG/M
3300033179|Ga0307507_10005210All Organisms → cellular organisms → Eukaryota → Opisthokonta21685Open in IMG/M
3300033179|Ga0307507_10008726All Organisms → cellular organisms → Eukaryota → Opisthokonta13858Open in IMG/M
3300033179|Ga0307507_10012236All Organisms → cellular organisms → Eukaryota10643Open in IMG/M
3300033179|Ga0307507_10220252Not Available1277Open in IMG/M
3300033179|Ga0307507_10310234Not Available959Open in IMG/M
3300033179|Ga0307507_10458579Not Available701Open in IMG/M
3300033179|Ga0307507_10572069Not Available590Open in IMG/M
3300033179|Ga0307507_10690961Not Available511Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza60.18%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.39%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031838Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EMHost-AssociatedOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10142718213300002245Forest SoilFKACSKTAKNKLNKVDKTKLLELLAKEVLRIGFPAVPTT*
JGIcombinedJ26739_10162342213300002245Forest SoilVLIKDIKDIEDKLGAVFKAPSKTAKNKANEVDKTKLLELLAKEVIRIGLSAVPTL*
Ga0099796_1016066613300010159Vadose Zone SoilIFKARGKTAKDKVDKVDKTKLPELLAKEVIRIGLPTIPTI*
Ga0137382_1113133713300012200Vadose Zone SoilVEDIKDEVGVIFEARSEAAEDKVDKVDKAKLPELLAEEVVRMGLPTVPTL*
Ga0137382_1135825013300012200Vadose Zone SoilRAAEDKADNVDKTNLPVLLVKEVIRIGLPVVPTL*
Ga0137362_1060899613300012205Vadose Zone SoilIFRAYSKTTKDKVDKVDKTKLLELLAKEVIRIGLPAVPTI*
Ga0137380_1153857313300012206Vadose Zone SoilVEDIKDKVGAIFKAYGETTEDKADEVDEAELPELFAEEVARMGL
Ga0137376_1076754613300012208Vadose Zone SoilIKDELGAVFKARGETAEDKADEVDETELLELLAEEVIRMGLPAVPTL*
Ga0137378_1144909313300012210Vadose Zone SoilDKVGAIFKACSKTTKDKVDEVNKAELLKLLAEKVIRMGLPTIPII*
Ga0137377_1142750813300012211Vadose Zone SoilVEDIEDKVGAIFEAYGKAAKDKVDEVDKAKLPKLLAEEVVRIDLPAVPTI*
Ga0137384_1110722613300012357Vadose Zone SoilVLIKEDIKEDELGAIFKAYSKTTKDKVDKVDKTKLLKLLTKEVVKIGLPAVPTI*
Ga0137385_1099245113300012359Vadose Zone SoilDKLRAIFKACGKTTKNKADKVNKTKLPELSAEEVIRMGLPTVPTS*
Ga0137385_1126549413300012359Vadose Zone SoilSRAIFKARGKTTKDKADKVDETKLPKLSAEEVIKIGLPAIPTS*
Ga0137385_1164628813300012359Vadose Zone SoilELGAVFEAYSETAKDKVNKADKTKLPKLSAEKIIRMGLLAVPTL*
Ga0137360_1142590113300012361Vadose Zone SoilVLIKDIKDKLGAVFKARGKTAKDKADKVDETKLPELLAEEVTRMGLPTVPTL*
Ga0137360_1143234913300012361Vadose Zone SoilVEDIKDKVGAIFKARGKTTKVKADKVDKTELLELLAEEVIRIDLPAVPTT*
Ga0137413_1130693513300012924Vadose Zone SoilVVIKDIKDELGAVFKARGETAKDKADEVDKTKLPELLAEEVIRMGLPAVPTL*
Ga0137413_1132355413300012924Vadose Zone SoilVVIKDIKDKLGAVFKTYSETTKDKADEVDKTKLPELLAKEVIRIGLPTIPTL*
Ga0137419_1150084113300012925Vadose Zone SoilVEDIKDKVGAIFKARGKTAKDKADKVDKTKLPELLAKEVIRIDLPTV
Ga0137407_1159340413300012930Vadose Zone SoilAVFKAYSKTTKDKVDKVDKTKLPKLLAEEVIRIGLPAVPTS*
Ga0137407_1232488813300012930Vadose Zone SoilVVIKDIKDKLGAVFKARGETAKDKADKVDETKLPELLAKEVIRIGFPAVPTL*
Ga0137412_1008638123300015242Vadose Zone SoilLSAVVVIKDIKDKLGAVFKAYGETAKDKVDKVDKTKLLELLAKEVIRMGLPAIPTL*
Ga0137408_138730323300019789Vadose Zone SoilVVIKDIKDKLGAVFKAYSETTKDKADKVDKTKLLELLAKEVIRIGLPAVPTS
Ga0193728_100160113300019890SoilVLIKDIREDELEAVFKAYGKTAKDKADKVDETKLLELLAKEVIRIGLPAVPTL
Ga0193728_100648243300019890SoilVLIKDDVKEGELGAVFKAYGETTKDKADKVDKTKLLELLVKEVIRIGLLAVPTL
Ga0193728_100726023300019890SoilVLIKDNIKEDKLGAIFKAYSKTTKDKVNKVDKTKLLELLVKEVIRIGLPAVPTL
Ga0193728_101068313300019890SoilVEDITDEVGAIFKAYGKTAEDKVDKVDKTELPELLAKDVARMGLPAVPTM
Ga0193728_101296923300019890SoilVVIKDIKDKLGAVFKACSKTTKDRADKVDKTKLLELLAEEVIRIGLPTVPTL
Ga0193728_101719213300019890SoilMDEVKAIFKAYGKTAKDKVDKVDKTKLLELLAKEVVRIGLPTIPTI
Ga0193728_102494213300019890SoilVEAWLSSQTEDIKDKLEASFKAYSETAKDKADKADGTKLLELLAKEVIRIGLPTIPTL
Ga0193728_102744813300019890SoilMENIKDEIQAVYKPYSKTAKDKIDKVDKTKLLELLAEEVIRIGLSTVPTL
Ga0193728_104422213300019890SoilVLIKDIKEDELGAVFKAYGKTAKDKADKVDKTKLPELLAKEVIIIGLPAVPTL
Ga0193728_104927413300019890SoilMEDIKDELGAVFKARGAKDKADKVDKTKLPELLAEEIIRIGLLTVPTL
Ga0193728_106377813300019890SoilVLIKDIREDELEAVFKARGKTTKDKADKVDKTKLLELLAKEVIRIGLPTVPTL
Ga0193728_111404313300019890SoilVEDIKDEVKAVFKAHGKTAKDKVDKVDETKLLELLAKEVIRIGLPTVPTI
Ga0193728_118293413300019890SoilKAYSKTAKDKVDKVDKTKLLELLAKEVIRIGLPAVPTI
Ga0193728_126904013300019890SoilMEDIKDKLGAIFKAYSETTEDKVDKVDKTKLLELLAKEVTRIGLPTVPVTEVGMSWNIMY
Ga0179590_117265913300020140Vadose Zone SoilSKAAGDKVDKVGKTKLLELLAKEVIRIGLPAISTI
Ga0210389_1116695113300021404SoilVEDIKDKVGAIFKAYSKATKDKVDKVDKAKLPELLAEEVIRIGLPTIPTS
Ga0179591_110316443300024347Vadose Zone SoilVAPVAVQQVVMLSEDVEDKFGAVFKAYGETAKDKIDKVDKAKLLELLAEEVIRIGLPVAPTT
Ga0209624_1095678913300027895Forest SoilVLIKDIKDKLGAVFKAYSKTTKDKADKVDKTKLPELLAKEVTRIGLFAVPTL
Ga0209006_1045290123300027908Forest SoilVEDIKDKVGAIFKAYSKTAKDKVDKVDKTKLLKLLAKEVIKIGLPAIPSL
Ga0209006_1085027713300027908Forest SoilVEDIKDKLKAIFKAYSKAAKNKVDKVDKTKLLELLAKEVIKIGLFTIPTI
Ga0209006_1100577713300027908Forest SoilVLIKDIREDELEAVFKARGKIAKDKADKVDKTKLPELLAKEVIKMGLPTVPTL
Ga0307515_1000231573300028794EctomycorrhizaVLIKDNIKEDELGAVFKAYGETTKDKADKVDKTKLLELLVKEVIRISLSAVSTL
Ga0307515_10003282363300028794EctomycorrhizaVEDIKDKVGAIFKAHGKTAKDKADEVDEAKLLELLAKEVVRIGLPAVPTI
Ga0307515_10003784113300028794EctomycorrhizaVLIKDIKDKLGAVFKARGKTTKDKADKVDKTKLLELLAKEVIKIGLSTVPTL
Ga0307515_1000492943300028794EctomycorrhizaVEDIEDKVGAIFKAYGETAKDKVDKVDKTKLPELLAKEVIRIGLPTIPTI
Ga0307515_1000643013300028794EctomycorrhizaVLIKDIIEDELEAVFKARGETAKDKVDKVDKTKLLELLAEKVIRIGLPAVPTL
Ga0307515_1000763813300028794EctomycorrhizaVTQYIHDSLSAVVVIKNIKDKLGAVFKAYSKTAKNKADKVNKTKLLKLLAKEVIRIGLPTVPTL
Ga0307515_1000809243300028794EctomycorrhizaMGIKDKLGAVFKAYGETAKDKTDKVDKTKLPELLAKEVIRIGLPTMPTL
Ga0307515_1000962333300028794EctomycorrhizaVEDIKDKIGAIFKAYGKTTKDKVDKVDKVDKTKLPELLAEEVIRMGLSAVPTI
Ga0307515_1001178913300028794EctomycorrhizaMEDIKDELKAVFKAYGETAEDKADKVDKVDKTELPELLAKEVIRIGLSTVPII
Ga0307515_1001317713300028794EctomycorrhizaVEDIKDKVGAIFKAYSKAAKDKVDKVDKAKLPELLAKEVIRIGLPTVSTI
Ga0307515_1001399213300028794EctomycorrhizaVLIKEDIKEDKLGAVFKARSETTKDKADKVDKTKLLELLVKEVIRIGLPIVPTL
Ga0307515_1001512633300028794EctomycorrhizaVLIKDIKEDELGAVFKARGETAKDKVDKVDKTKLPELLAKEVIRIGLSAVPTL
Ga0307515_1001688823300028794EctomycorrhizaVEDIKDKAEAIFKACSKAAKDKVDKVDKAKLLELLAKEVIKIGLPTIPTI
Ga0307515_1001688843300028794EctomycorrhizaVEDIKDEAGAIFKARGEAAEDKVDEVDKAKLLKLLAEEVIRMGLPTVPTI
Ga0307515_1001980923300028794EctomycorrhizaVEDIKDEVGAIFKAHGKAAKDKVDKVDKTKLLELLAEEVIRIGLPAVPTI
Ga0307515_1001990133300028794EctomycorrhizaMQQVAVLIKDIREDELEAVFKAYGETAKDKVDKVDETKLPELSAKEVIRISLPTVPTL
Ga0307515_1002093413300028794EctomycorrhizaVLIKEDIKEEELGAIFNTYSETTKDKADKVDKTKLLKLLVEEVIRIGLPIVPTL
Ga0307515_1002140533300028794EctomycorrhizaVLIKDIIENELEAVFKAYSKTTKNKADKVNKTKLPELLAKEVIRIGLPTVPTL
Ga0307515_1002682623300028794EctomycorrhizaVQIKDIKEDELGAVFKACGETTKDKADKVDKTKLPELLAKEVIRMGLPTVPTL
Ga0307515_1003080223300028794EctomycorrhizaVEDIKNKVGAIFKAYSKTAEDKVDKVDKTKLLELLAKEVIRIGLPTAPTI
Ga0307515_1004657523300028794EctomycorrhizaVLIKEDIKEEKLGAVFKARSETAKDKVDKVDKTTLLELLIKEVIRIGLPAVPTL
Ga0307515_1005006323300028794EctomycorrhizaVLIKKDIKEEKLGAVFKTYSKTTKDKADKVDKTKLLELLVKDIIRISLPTVPTL
Ga0307515_1005322253300028794EctomycorrhizaVLIKDIIEDELEAVFKACGETAKNKADKVDETKLPELLAKEVIKIGLPAVPTL
Ga0307515_1006811423300028794EctomycorrhizaVLIKEDIKEEELGAIFKACGKTAKNKANKVDKTKLPELLVKEVIRIGLSVVPTL
Ga0307515_1013699423300028794EctomycorrhizaLLQGSVTVVVIKDIKDKLGAVFKARGETAKDKADKVDKTKLLKLLAEEVIKIGLLTVPTL
Ga0307515_1019676723300028794EctomycorrhizaVLIKDDIKEDELGAVFKAYGETVKDKADKVDKTKLPKLLVKEVIRIGLPTVPTL
Ga0307515_1035371313300028794EctomycorrhizaVLIKDIIEDELEAVFKACGETAKDKVDEVDKTKLPELLAEEVIK
Ga0170824_11946255013300031231Forest SoilAVFKPYSKATKDKVNKVDKTKPLELLAKEVIRIGLSTIPTL
Ga0307518_1003342413300031838EctomycorrhizaMEDIKDELGAVFKAYSKTIKDKADKIDKTKLLELLAEEVARIGFFTIPTT
Ga0307518_1005747813300031838EctomycorrhizaLVKVDINEDEFRAVFEICSKTTKNKADKVDKTKLLKLSVEKVIRIGFFTIPTS
Ga0307518_1006044123300031838EctomycorrhizaVLIKDIKDIKDKLEAVFKAYGKTTKDKADKVDKTKLLKLLVEEVIRIGLFAIPTL
Ga0307518_1007163213300031838EctomycorrhizaVLTKNIKDKLRAVFKAYSEITKNKINKVDKTKLLELLSEKIIKIGFFAIPTS
Ga0307518_1007727213300031838EctomycorrhizaEDIKDELGASFKAYSKTIKDKVDKVDKIKLLELLAKEVIKIGLFIIPTL
Ga0307518_1013190623300031838EctomycorrhizaLGAVFEAYGKATKDKIDKVDKIELLELLAEAIIKIGFPAVPTL
Ga0307518_1014918213300031838EctomycorrhizaLIKDDVKEDELGIIFKACGKTTKDKADKVDKIELLELLVEEVIKMGFSAVPTL
Ga0307518_1014928943300031838EctomycorrhizaMEDIKDELGAVFEAYSKTTKNKADKVDKTELLKLLAKEVIRIGLFTVPII
Ga0307518_1016133523300031838EctomycorrhizaMLIKNVKNIKDELGAVFKTYSKTIKDKVNEVDKTELLELLAEEVIRMEFFAVPTL
Ga0307518_1016472123300031838EctomycorrhizaVVVKNTKEDELRAVFKARGETAKDKADKVDETELPELLAEEVIKMGLPTL
Ga0307518_1017820013300031838EctomycorrhizaVLIKDIREDELEAVFKACGETAKDEADKVNKTELLELLAEEVIRMGLFTVPTP
Ga0307518_1021528713300031838EctomycorrhizaVEDIKDKVRAIFKACGEAIKDKIDKIDKAKLLELLAEEVIRIGLPIVPTI
Ga0307518_1023000913300031838EctomycorrhizaVLIKDIKDIKDKLGAVFKAYGKTAKNEADKVDKTKLLKLSAEEVIKIGLFTILTL
Ga0307518_1023210813300031838EctomycorrhizaAWLSSWIEDIKDELGPVFKSCGETTKDKVDKVDKTKLPELLAKEVIRLGLPTVPTL
Ga0307518_1024277513300031838EctomycorrhizaMVVKDTREDELRAVFEAHSETTKDKADKVDETELPELLAEEVIRMGLFTVPTL
Ga0307518_1024879013300031838EctomycorrhizaVLIKDIREDELKAIFEARGEIVKDEVDKIDKTELLELLAKEVIRIGLFTILTL
Ga0307518_1028266123300031838EctomycorrhizaVLIKDIKEDELEAVFEAHGETAEDKADEVNKTELLELSAEEVIRMGLPTIPIL
Ga0307518_1031006013300031838EctomycorrhizaVVILNSDIKEDKFKAIFKAYSKIAKDKVNKVDRIKLLELLVKKVAKIGLFIISTT
Ga0307518_1035907313300031838EctomycorrhizaLGAIFEAYGETTKDKADEVDKTKLPELLAEEVIKMGLFAVPTL
Ga0307518_1035911813300031838EctomycorrhizaVLIKDIKDIKDKLKAVFKAYGETAKDKIDKVDKTELLELLAEEVIRMGLFAIPTL
Ga0307518_1038580813300031838EctomycorrhizaVLIKDIEDIEDELGAVFEACGKTTKDKADEVDKTELLELLAEEVIRIGLFAVPTL
Ga0307518_1042694813300031838EctomycorrhizaVLIKDVKDIKDELRAVFKARSETAEDKTDKVDKTELPELLAEEVIKMGLSAVPTS
Ga0307518_1051580213300031838EctomycorrhizaIKENELKAIFKAYSKTTENKINKVDKTELLELLVKEVIKIGLFVVPTL
Ga0307518_1056672613300031838EctomycorrhizaVLIKNIKEDELEAVFEAYGETAKDKVDKVDKTKLPELLAEEVIKIGLFTIPTS
Ga0307518_1057290013300031838EctomycorrhizaMEDIKEEELRAVFKARGKTIKNKADKVDKIKLPELLAEEVTRIDLSAIPTT
Ga0307518_1063179413300031838EctomycorrhizaAVFKAYNETTKDKVDKVDKTELLELSAEEVTRIGLFTVPTL
Ga0307507_100001001013300033179EctomycorrhizaMEDIKDELGAVFKARGKAAEDKADKVDKTKLLELSAKVIIKMGLPPISTL
Ga0307507_10000271293300033179EctomycorrhizaVLIKDIKDIKDELGAGFKACGKTAKDKADKVDKVDKTKLLELLAKEVIRMGLPTVPTL
Ga0307507_10000738283300033179EctomycorrhizaMEDIKDELGAVFKARGKAAENKADKVDKTKLLELLAKAIIRIGLPTVPTL
Ga0307507_1000087763300033179EctomycorrhizaMEDIKDKLGAVFKARSEAAEDKANKVDKTKLLELSAKAIIKIGLPPVPTL
Ga0307507_1000240213300033179EctomycorrhizaVLIKNIKDKLGVVFEAYSKTAKDKADKVDKTKLLELLAKEVIRIGLPAIPTL
Ga0307507_1000410733300033179EctomycorrhizaVEDIEDKVGAIFKARGETAEDKADEVDETELPELLAEEVARMDLPTVPTI
Ga0307507_1000414053300033179EctomycorrhizaMETVLEARGEAAEDEADEVDKTKLLELLAEEIIRMGLPAVPTL
Ga0307507_1000521083300033179EctomycorrhizaVENIKDEEGAIFKARSKTAKDKANKVDKVKLPELLAEEAIRIGLSTIPSI
Ga0307507_1000872633300033179EctomycorrhizaVLIKDIKDIKDELGAVFKAHGKTAEDKVDKVDKTKLPELLAKEVIRMGLPTIPTL
Ga0307507_1001223653300033179EctomycorrhizaVEDIKDKLEAIFKAHSEAAKDKADKVDKTKLLELLAEVIIRIGLPAVPTL
Ga0307507_1022025213300033179EctomycorrhizaVEDIKDKVKAVFKACGKTAKDKVDKVDKTKLPELLAKEVIRMGLFTIPTI
Ga0307507_1031023413300033179EctomycorrhizaVVILSKNIKEDKFRAVFKARGKTAKDKADKVDKTKLPELLAKEVARIGLPTVPTI
Ga0307507_1045857913300033179EctomycorrhizaVEDIKDKVKAIFKARGKTTKDKVDKVDKTKLPELLAEEVIRIGLPTVPTI
Ga0307507_1057206923300033179EctomycorrhizaMEDIKEEELGAVFKACGETAKDKADKVDKTKLLELLAEEVIRMDLPAVPTI
Ga0307507_1069096113300033179EctomycorrhizaMEARLSSQMEDIKEEELGAIFKARSETIKDKVDKVDKTKLPELLAKEVIKIGLSAVPTI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.