Metagenome / Metatranscriptome Family F082010

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082010
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	91 residues
Representative Sequence	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Number of Associated Samples	81
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.72 %
% of genes near scaffold ends (potentially truncated)	46.02 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.327 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.973 % of family members)
Environment Ontology (ENVO)	Unclassified (46.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.76% β-sheet: 0.00% Coil/Unstructured: 51.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF10067	DUF2306	14.16
PF04392	ABC_sub_bind	7.08
PF14295	PAN_4	4.42
PF00436	SSB	3.54
PF13467	RHH_4	2.65
PF04191	PEMT	0.88
PF04956	TrbC	0.88
PF14534	DUF4440	0.88
PF13751	DDE_Tnp_1_6	0.88
PF04221	RelB	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.08
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	3.54
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	3.54
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.88
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
All Organisms	root	All Organisms	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
cellular organisms	root	All Organisms → cellular organisms	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	21.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.77 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1047220	Not Available	626	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10083065	Not Available	801	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10107571	Not Available	685	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10055127	Not Available	881	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1028763	Not Available	881	Open in IMG/M
3300000956\|JGI10216J12902_100912999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	518	Open in IMG/M
3300004633\|Ga0066395_10490327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300005332\|Ga0066388_100706188	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300005332\|Ga0066388_101738027	Not Available	1106	Open in IMG/M
3300005332\|Ga0066388_102155695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300005332\|Ga0066388_103419565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300005332\|Ga0066388_105430109	Not Available	646	Open in IMG/M
3300005332\|Ga0066388_105623723	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005332\|Ga0066388_108046224	Not Available	527	Open in IMG/M
3300005332\|Ga0066388_108056399	Not Available	527	Open in IMG/M
3300005363\|Ga0008090_10010691	Not Available	702	Open in IMG/M
3300005363\|Ga0008090_10077167	Not Available	524	Open in IMG/M
3300005363\|Ga0008090_10171962	Not Available	1242	Open in IMG/M
3300005713\|Ga0066905_101412757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300005764\|Ga0066903_100223988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2856	Open in IMG/M
3300005764\|Ga0066903_100398062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2263	Open in IMG/M
3300005764\|Ga0066903_100511366	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300005764\|Ga0066903_100550625	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300005764\|Ga0066903_100820657	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300005764\|Ga0066903_100891704	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300005764\|Ga0066903_102508651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300005764\|Ga0066903_103372281	Not Available	862	Open in IMG/M
3300005764\|Ga0066903_104036244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	787	Open in IMG/M
3300005764\|Ga0066903_104829352	Not Available	716	Open in IMG/M
3300005764\|Ga0066903_106672513	Not Available	600	Open in IMG/M
3300005937\|Ga0081455_10087851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2528	Open in IMG/M
3300005937\|Ga0081455_10208909	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006049\|Ga0075417_10404412	Not Available	676	Open in IMG/M
3300009792\|Ga0126374_10802376	Not Available	719	Open in IMG/M
3300009792\|Ga0126374_10931181	Not Available	676	Open in IMG/M
3300010043\|Ga0126380_10859873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300010046\|Ga0126384_12402996	Not Available	510	Open in IMG/M
3300010047\|Ga0126382_10107936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1816	Open in IMG/M
3300010048\|Ga0126373_13088981	Not Available	519	Open in IMG/M
3300010358\|Ga0126370_10270294	All Organisms → cellular organisms → Bacteria → Proteobacteria	1330	Open in IMG/M
3300010359\|Ga0126376_10232690	Not Available	1554	Open in IMG/M
3300010361\|Ga0126378_10571254	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300010362\|Ga0126377_10671424	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300010366\|Ga0126379_10244302	Not Available	1763	Open in IMG/M
3300010366\|Ga0126379_10516739	Not Available	1268	Open in IMG/M
3300010376\|Ga0126381_103546323	Not Available	612	Open in IMG/M
3300010398\|Ga0126383_10217797	Not Available	1847	Open in IMG/M
3300010863\|Ga0124850_1021945	All Organisms → cellular organisms → Bacteria → Proteobacteria	2047	Open in IMG/M
3300012924\|Ga0137413_10918327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300012927\|Ga0137416_11510213	Not Available	610	Open in IMG/M
3300012948\|Ga0126375_11307116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300012948\|Ga0126375_11413030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	590	Open in IMG/M
3300012971\|Ga0126369_11281584	Not Available	823	Open in IMG/M
3300012971\|Ga0126369_13311024	Not Available	528	Open in IMG/M
3300012971\|Ga0126369_13720208	Not Available	500	Open in IMG/M
3300012989\|Ga0164305_10724756	Not Available	816	Open in IMG/M
3300016294\|Ga0182041_11253096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	677	Open in IMG/M
3300016341\|Ga0182035_10191097	Not Available	1611	Open in IMG/M
3300016404\|Ga0182037_10980870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	736	Open in IMG/M
3300016445\|Ga0182038_11852753	Not Available	545	Open in IMG/M
3300018072\|Ga0184635_10291506	Not Available	641	Open in IMG/M
3300018081\|Ga0184625_10068807	Not Available	1797	Open in IMG/M
3300021361\|Ga0213872_10118328	Not Available	1173	Open in IMG/M
3300021372\|Ga0213877_10030781	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300021439\|Ga0213879_10084040	Not Available	878	Open in IMG/M
3300021444\|Ga0213878_10102389	Not Available	1162	Open in IMG/M
3300021560\|Ga0126371_10714944	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300021560\|Ga0126371_11300101	Not Available	861	Open in IMG/M
3300021560\|Ga0126371_12358617	Not Available	643	Open in IMG/M
3300027873\|Ga0209814_10421851	Not Available	588	Open in IMG/M
3300028536\|Ga0137415_10794923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300031543\|Ga0318516_10210328	Not Available	1124	Open in IMG/M
3300031544\|Ga0318534_10338929	Not Available	866	Open in IMG/M
3300031546\|Ga0318538_10187618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1101	Open in IMG/M
3300031564\|Ga0318573_10193290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1077	Open in IMG/M
3300031573\|Ga0310915_10128776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1734	Open in IMG/M
3300031573\|Ga0310915_10664609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	736	Open in IMG/M
3300031668\|Ga0318542_10176237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1071	Open in IMG/M
3300031736\|Ga0318501_10227387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	982	Open in IMG/M
3300031748\|Ga0318492_10511760	Not Available	637	Open in IMG/M
3300031770\|Ga0318521_10497368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	732	Open in IMG/M
3300031782\|Ga0318552_10322303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	786	Open in IMG/M
3300031793\|Ga0318548_10101120	Not Available	1380	Open in IMG/M
3300031798\|Ga0318523_10616818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	534	Open in IMG/M
3300031821\|Ga0318567_10374312	Not Available	806	Open in IMG/M
3300031821\|Ga0318567_10797644	Not Available	535	Open in IMG/M
3300031846\|Ga0318512_10303978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	793	Open in IMG/M
3300031859\|Ga0318527_10499894	Not Available	519	Open in IMG/M
3300031860\|Ga0318495_10287265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	733	Open in IMG/M
3300031879\|Ga0306919_10101878	All Organisms → cellular organisms → Bacteria → Proteobacteria	2021	Open in IMG/M
3300031880\|Ga0318544_10045866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1565	Open in IMG/M
3300031890\|Ga0306925_10373221	Not Available	1531	Open in IMG/M
3300031896\|Ga0318551_10834746	Not Available	536	Open in IMG/M
3300031897\|Ga0318520_10496079	Not Available	753	Open in IMG/M
3300031912\|Ga0306921_12478654	Not Available	539	Open in IMG/M
3300031941\|Ga0310912_10852267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	702	Open in IMG/M
3300031942\|Ga0310916_10926818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	729	Open in IMG/M
3300031945\|Ga0310913_10624637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	763	Open in IMG/M
3300031947\|Ga0310909_10951771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	703	Open in IMG/M
3300031959\|Ga0318530_10401751	Not Available	568	Open in IMG/M
3300032001\|Ga0306922_10786822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	995	Open in IMG/M
3300032025\|Ga0318507_10355358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	638	Open in IMG/M
3300032025\|Ga0318507_10481057	Not Available	540	Open in IMG/M
3300032042\|Ga0318545_10275098	Not Available	605	Open in IMG/M
3300032052\|Ga0318506_10531218	Not Available	521	Open in IMG/M
3300032060\|Ga0318505_10518801	Not Available	562	Open in IMG/M
3300032063\|Ga0318504_10065476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1565	Open in IMG/M
3300032064\|Ga0318510_10357549	Not Available	616	Open in IMG/M
3300032066\|Ga0318514_10226196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	982	Open in IMG/M
3300032076\|Ga0306924_11237651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300032076\|Ga0306924_12310658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	545	Open in IMG/M
3300032094\|Ga0318540_10267485	Not Available	825	Open in IMG/M
3300032261\|Ga0306920_100234266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.81%
Plants	Host-Associated → Plants	4.42%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Sediment	Environmental → Aquatic → Sediment	1.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.34%
Loam	Environmental → Terrestrial → Soil → Loam	19.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.47%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10472202	3300000579	Forest Soil	MWDDLRNIFTGPVGPWICLVGLLVISMLWLEGERLLYTPLAFAWATLIVARHFDFAVVDQYMLILAVFYGVYYAMPHREVSKGPADQSAQQKPLIPAN*
AF_2010_repII_A1DRAFT_100830651	3300000597	Forest Soil	DIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP*
AF_2010_repII_A1DRAFT_101075711	3300000597	Forest Soil	MWDELKDVFTGPIGPWIGLFGLVVISLLWLEGERVLYTPIAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHHWEISKPPSTDALKKEPFMSTRPRA*
AF_2010_repII_A001DRAFT_100551271	3300000793	Forest Soil	MWDELKDVFTGPIGPWIGLFGLVVISLLWLEGERVLYTPIAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHQGDLETALDRRTQKRAVMTGSDPELT*
AP72_2010_repI_A001DRAFT_10287632	3300000893	Forest Soil	MWDDLRSIFTGPVGPWICLVGLLVISMLWLEGERLLYTPLAFAWATLIVARHFDFAVVDQYMLILAVFYGVYYAMPHREVSKGPADQSAQQKPLIPAN*
JGI10216J12902_1009129991	3300000956	Soil	MWDELKDIFTGPIGPWISLLGLIVISLVWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPSSTDALKK
Ga0066395_104903272	3300004633	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP*
Ga0066388_1007061884	3300005332	Tropical Forest Soil	DEIKDVFTGPIGPWICLLGLVVISMLWQEGERLLYTPITFAWATLVVAKHFAFTVLDQYMLILTVYFGVYYAMPHRTISKPSSADAPKKGP*
Ga0066388_1017380272	3300005332	Tropical Forest Soil	MWDEIKDVFTGPIGPWVCLFGLVVISLLWLEGERLLYTPITFAWAALVVARHFAFTVLDQYMLILAVYFGVYYAMPHRTISKPSLADAHKKEA*
Ga0066388_1021556953	3300005332	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREILKPPLTDALKKEL*
Ga0066388_1034195651	3300005332	Tropical Forest Soil	MWDELKTVFTGPVGPWICLVGLLVISLLWLEGERLLYAPPAFAWATLIVARHFDFPVGDQYMLILAVFVGVYYAMPHRAVSKQPGG*
Ga0066388_1054301091	3300005332	Tropical Forest Soil	MWDEIKDVFTGPIGPWICLLALVVISLLWLEGERLLYTPITFAWATLVVARHFAFSVLDQYMLILAVYFGVYYAMPHRTISKPSLADAPKKEA*
Ga0066388_1056237232	3300005332	Tropical Forest Soil	MWDELKNIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVAKHFDFVVLDQYMLILAVYFGVYYAMPHREISK
Ga0066388_1080462241	3300005332	Tropical Forest Soil	MWDELTTIFTGPAGPWIGLVALVVISLLRQEGERLLYTPPAFAWATLIIARHFSFAVSDQYMLLLAVYFGVYYAMPHRAALKGSLTDTLNKASS*
Ga0066388_1080563991	3300005332	Tropical Forest Soil	GIIITNKEASQIRWHQMWDELRTIFTGPVGPWICLLGLVVISLVWLEGERLLYTPLAFAWAALVVARHFGVVVVDQYMLILAVFFGVYYAMTHHRAVLKQPAG*
Ga0008090_100106911	3300005363	Tropical Rainforest Soil	MWDELKDVFTGPIGPWIGLFGLVVISLLWLEGERVLYTPIAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPH
Ga0008090_100771671	3300005363	Tropical Rainforest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPVAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP*
Ga0008090_101719623	3300005363	Tropical Rainforest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERVLYTPIAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHREISKPPLDRRAQKRAVMTGSDPELT*
Ga0066905_1014127571	3300005713	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEP*
Ga0066903_1002239882	3300005764	Tropical Forest Soil	MWDELKDIFTGPVGPWICLLGLVVISLLWLLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTEARKKLRDA*
Ga0066903_1003980624	3300005764	Tropical Forest Soil	MWDELKNIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLVLAVYVGIFYAMPHREISKPPSTDAFKKEP*
Ga0066903_1005113664	3300005764	Tropical Forest Soil	MWDELRTIFTGPVGPWICLVGLVVLSLLWLEGERLLYTPLAFAWAALIVARHFDFAVVDQYMLLLAVFFGVYYAMPHRAVAKQPAAEVLK*
Ga0066903_1005506251	3300005764	Tropical Forest Soil	MWEELRSVFTGPVGPWICLVGLLVISLLLQEGERLLYTPPAFAWAALTVARHFDFSVADQYMLILAVFVGVYYAMPHRGVSKQSTRLSDEAAS*
Ga0066903_1008206574	3300005764	Tropical Forest Soil	MWDELRAIFTGPVGPWICLVGLVVISLLWLEGERLLYTPLAFAWAALIVARHFDFAVVDQYMLLLAVFFGVYYAMPHRAVLKQPAG*
Ga0066903_1008917043	3300005764	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWAALIVARHFDFVVLDQYMLILTVYFGVYYAMPHRDISNPPSTDALKKEP*
Ga0066903_1025086512	3300005764	Tropical Forest Soil	MWEELRTVFTGPVGPWICLVGLLVISLLLQEGERLLYTPPAFAWAALIVARHFDFSVADQYMLIFAVFVGVYYAMPHRGVSKQSTPAE*
Ga0066903_1033722811	3300005764	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYAPTAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHREILKPPSTDALKK*
Ga0066903_1040362441	3300005764	Tropical Forest Soil	MWDELKDVFTGPIGPWICLFALVVISLLWLEGERLLYTPIAFAWASLIVARHFDFIVLDQYMLILAVYFGVYYAMPHRWTP
Ga0066903_1048293521	3300005764	Tropical Forest Soil	MWDEIKDVFTGPIGPWICLFGLVVISLLWLEGERLLYTPITFAWAALVVARHFAFTVLDQYMLILAVYFGVYYAMPHRTISKPSLADAHKKEA*
Ga0066903_1066725132	3300005764	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPVAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWE
Ga0081455_100878518	3300005937	Tabebuia Heterophylla Rhizosphere	MWDEIKDVFMGPVGPWICVIGLVIVSLLWHEGEQLLYTPIAFALATMIVAKNLEFAVWDQYILILAVFFGVYYAMPHRQRANTSKPDTLKKDP*
Ga0081455_102089093	3300005937	Tabebuia Heterophylla Rhizosphere	MWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILTVYFGVYYAMPHREISKPPSTDALKKEP*
Ga0075417_104044122	3300006049	Populus Rhizosphere	MWDEIKDVFMGPVGPWICVIGLVIVSLLWHEGEQLLYTPIAFALATMIVAKNFEFAVWDQYILILAVFFGVYYAMPHRQRANTSKPDTLKKDP*
Ga0126374_108023761	3300009792	Tropical Forest Soil	DARYGRHPMWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAIPHRDISKPPSTDALKKEP*
Ga0126374_109311811	3300009792	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKESLMLGR*
Ga0126380_108598731	3300010043	Tropical Forest Soil	PIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEP*
Ga0126384_124029962	3300010046	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMP
Ga0126382_101079363	3300010047	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP*
Ga0126373_130889811	3300010048	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHRDISKPPSTDALKKEP*
Ga0126370_102702944	3300010358	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTDAPKREP*
Ga0126376_102326904	3300010359	Tropical Forest Soil	MWDEIKDVFTGPIGPWICLLALVVISLLWLEGERLLYTPITIAWATLVVARHFAFSVLDQYMLILAVYFGVYYAMPHRTISKPSLADAPKKEA*
Ga0126378_105712541	3300010361	Tropical Forest Soil	RTIFTGPVGPWICLLGLVVISLVWLEEERLLYTPLAFAWAALIVARHFDFAVVDQYMLLLAVFFGVYYAMPHRAVLKQPAG*
Ga0126377_106714242	3300010362	Tropical Forest Soil	MWDELRTIFTGPVGPWICLVGLVVLSLLCLEGERLLYTPLAFAWAALIVARHFDFAVVDQYMLLLAVFFGVYYAMPHRAVAKQPAAEVLK*
Ga0126379_102443023	3300010366	Tropical Forest Soil	IQILRYYPATDARYGRHLMWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHRDISKPPSTDALKKEP*
Ga0126379_105167392	3300010366	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTDAPKKEP*
Ga0126381_1035463232	3300010376	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDAFKKEP*
Ga0126383_102177975	3300010398	Tropical Forest Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPST
Ga0124850_10219452	3300010863	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFGFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP*
Ga0137413_109183271	3300012924	Vadose Zone Soil	MWDELKTLLTGPEGPWICLLGLVVISLVAGEGHRRLYTPIAFAWAAIIVARHFGFAVSDQYMLILAVYIGLYYGMPQSQTSEIAKPSSPDTVKKDP*
Ga0137416_115102132	3300012927	Vadose Zone Soil	MPWDELKTLLTGPEGPWICLLGLVVISLVAREGHRRLYTPIAFAWAAIIVARHFGFSVSDQYMLILAVYIGLYYGMPQSPASDIAKPSSPDTFKKDP*
Ga0126375_113071161	3300012948	Tropical Forest Soil	TGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLVVAVYFGVYYAMPHREFLKPPSTDAPKKEP*
Ga0126375_114130302	3300012948	Tropical Forest Soil	WICLLGLVVISLLWLEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEP*
Ga0126369_112815842	3300012971	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMP
Ga0126369_133110241	3300012971	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGFVVISLLWLEGERLLYTPIAFAWATLIVARHFGFVVLDQYMLIVAVYFGVYYAMPHWEILKPPS
Ga0126369_137202081	3300012971	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLTWLEGVRLLYTPIAFAWATLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEP*
Ga0164305_107247561	3300012989	Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA*
Ga0182041_112530961	3300016294	Soil	IGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0182035_101910972	3300016341	Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKK
Ga0182037_109808701	3300016404	Soil	KDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0182038_118527532	3300016445	Soil	MWDELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPLAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTDAPKKEP
Ga0184635_102915062	3300018072	Groundwater Sediment	MWDEIKDVFMGPVGPWICVIGLVIVSLLWHEGEQLLYTPIASALATMIVAKNFEFAVWDQYILILAVFFGVYYAMPHRQRANTSKPDTLKKDP
Ga0184625_100688073	3300018081	Groundwater Sediment	MWDEIKDVFMGPVGPWICVIGLVIVSLLWHEGEQLLYTPIASALATMIVAKNFEFAVWDQYILILAVFFGVYYAMPHRQRANTSKPDTLKKDS
Ga0213872_101183281	3300021361	Rhizosphere	MWDELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKVP
Ga0213877_100307811	3300021372	Bulk Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPVAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHWERSASPTGSVSKSHRRCSPAPTR
Ga0213879_100840401	3300021439	Bulk Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLSLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWERSASPTGSVSKSHRRCSPAPTR
Ga0213878_101023892	3300021444	Bulk Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPVAFAWATLIVARHFNFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0126371_107149442	3300021560	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0126371_113001011	3300021560	Tropical Forest Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEP
Ga0126371_123586171	3300021560	Tropical Forest Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKESLMLGR
Ga0209814_104218511	3300027873	Populus Rhizosphere	MWDEIKDVFMGPVGPWICVIGLVIVSLLWHEGEQLLYTPIAFALATMIVAKNFEFAVWDQYILILAVFFGVYYAMPHRQRANTSKPDTLKKDP
Ga0137415_107949232	3300028536	Vadose Zone Soil	MWDELKTLLTGPEGPWICLLGLVVISLVAGEGHRRLYTPIAFAWAAIIVARHFGFAVSDQYMLILAVYIGLYYGMPQSQTSEIAKPSSPDTVKKDP
Ga0318516_102103281	3300031543	Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0318534_103389291	3300031544	Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318538_101876183	3300031546	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318573_101932901	3300031564	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0310915_101287761	3300031573	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPLAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTDAPKKEP
Ga0310915_106646091	3300031573	Soil	DIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318542_101762371	3300031668	Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318501_102273873	3300031736	Soil	FTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318492_105117601	3300031748	Soil	IFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0318521_104973681	3300031770	Soil	IFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318552_103223031	3300031782	Soil	SPSRPIHGPIGPVDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318548_101011202	3300031793	Soil	MWVELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0318523_106168181	3300031798	Soil	KDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318567_103743122	3300031821	Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEI
Ga0318567_107976441	3300031821	Soil	LMWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0318512_103039782	3300031846	Soil	MWDELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318527_104998942	3300031859	Soil	MWDELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHWEI
Ga0318495_102872652	3300031860	Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0306919_101018783	3300031879	Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0318544_100458662	3300031880	Soil	MWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIALAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0306925_103732211	3300031890	Soil	MWNEFKDIFAGPIGPWICLVGLVVISLLWLEGERLLYTPISFAWATLIVARHFDFVVVDQYMLILAVYFGVYYAMPHWWISKLPS
Ga0318551_108347461	3300031896	Soil	EIGRHLMWDELKDIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0318520_104960792	3300031897	Soil	VDELKDIFTGPIGPWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0306921_124786541	3300031912	Soil	GRHLMWNEFKDIFAGPIGPWICLVGLVVISLLWLEGERLLYTPISFAWATLIVARHFDFVVVDQYMLILAVYFGVYYAMPHWWISKLPSTDALKKEP
Ga0310912_108522671	3300031941	Soil	LKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0310916_109268181	3300031942	Soil	TGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0310913_106246372	3300031945	Soil	RIFRGALKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0310909_109517711	3300031947	Soil	QILRYYPATFEIGRHLMWNEFKDIFAGPIGPWICLVGLVVISLLWLEGERLLYTPISFAWATLIVARHFDFVVVDQYMLILAVYFGVYYAMPHWWISKLPSTDALKKEP
Ga0318530_104017512	3300031959	Soil	DLARRIFRGALKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0306922_107868221	3300032001	Soil	LARRIFRGALKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318507_103553581	3300032025	Soil	FRGALKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0318507_104810571	3300032025	Soil	DIFTGPIGPWICLLGLVVISLLWQEGERLLYTPIAFAWASLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0318545_102750981	3300032042	Soil	MWDELKDIFTGPIGPWIGLLGLVVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLILAVYFGVYYAMPHREISKPPSTDALKKEA
Ga0318506_105312181	3300032052	Soil	PWIGLLGLVVISLLWREGERLLYTPIAFAWATLIVTRHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0318505_105188011	3300032060	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVAKHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKK
Ga0318504_100654762	3300032063	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTDAPKKEP
Ga0318510_103575491	3300032064	Soil	DIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHWEILKPPSTDALKKEP
Ga0318514_102261961	3300032066	Soil	TGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0306924_112376511	3300032076	Soil	IGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKSPSTDAPKKEP
Ga0306924_123106581	3300032076	Soil	KDIFAGPIGPWICLVGLVVISLLWLEGERLLYTPISFAWATLIVARHFDFVVVDQYMLILAVYFGVYYAMPHWWISKLPSTDALKKEP
Ga0318540_102674851	3300032094	Soil	MWVELKDIFTGPIGPWIGLLGLLVISLLWLEGERLLYTPIAFAWATLIVARHFDFVVLDQYMLIVAVYFGVYYAMPHREFLKPPSTGAPKKEP
Ga0306920_1002342661	3300032261	Soil	MWNEFKDIFAGPIGPWICLVGLVVISLLWLEGERLLYTPISFAWATLIVARHFDFVVVDQYMLILAVYFGVYYAMPHWWISKLPSTDALKKEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082010

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences