Metagenome Family F082011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082011
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	51 residues
Representative Sequence	MALARASDDPALKQYYEELALGFVQKAGNEHDPDNTAALLATINPDSGNTNRRGR
Number of Associated Samples	63
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.09 %
% of genes near scaffold ends (potentially truncated)	30.97 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.106 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.203 % of family members)
Environment Ontology (ENVO)	Unclassified (53.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.76% β-sheet: 0.00% Coil/Unstructured: 60.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13924	Lipocalin_5	2.65
PF13545	HTH_Crp_2	1.77
PF03401	TctC	0.88
PF01656	CbiA	0.88
PF05532	CsbD	0.88
PF00239	Resolvase	0.88
PF13507	GATase_5	0.88
PF13436	Gly-zipper_OmpA	0.88
PF13847	Methyltransf_31	0.88
PF01106	NifU	0.88
PF03928	HbpS-like	0.88
PF04120	Iron_permease	0.88
PF01068	DNA_ligase_A_M	0.88
PF12833	HTH_18	0.88
PF09361	Phasin_2	0.88
PF04140	ICMT	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.88
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.88
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.88
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
All Organisms	root	All Organisms	23.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
cellular organisms	root	All Organisms → cellular organisms	23.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02P2Z0X	Not Available	510	Open in IMG/M
2070309004\|prs_FIHLEPW02Q5XHQ	Not Available	511	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10087007	Not Available	778	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10118095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300004633\|Ga0066395_10021014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2595	Open in IMG/M
3300005175\|Ga0066673_10139401	Not Available	1341	Open in IMG/M
3300005179\|Ga0066684_10899985	Not Available	578	Open in IMG/M
3300005332\|Ga0066388_100284444	Not Available	2297	Open in IMG/M
3300005332\|Ga0066388_101345487	All Organisms → cellular organisms → Bacteria → Proteobacteria	1235	Open in IMG/M
3300005332\|Ga0066388_101439316	Not Available	1200	Open in IMG/M
3300005332\|Ga0066388_102579226	Not Available	925	Open in IMG/M
3300005332\|Ga0066388_102787169	Not Available	893	Open in IMG/M
3300005332\|Ga0066388_104718996	Not Available	693	Open in IMG/M
3300005332\|Ga0066388_104801952	Not Available	687	Open in IMG/M
3300005536\|Ga0070697_101713099	Not Available	562	Open in IMG/M
3300005561\|Ga0066699_11253834	Not Available	508	Open in IMG/M
3300005569\|Ga0066705_10647385	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_101147242	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300005764\|Ga0066903_102858288	Not Available	937	Open in IMG/M
3300005764\|Ga0066903_103457580	Not Available	851	Open in IMG/M
3300005764\|Ga0066903_104444178	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300005764\|Ga0066903_104452434	Not Available	748	Open in IMG/M
3300005764\|Ga0066903_105456566	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_105579868	Not Available	662	Open in IMG/M
3300005764\|Ga0066903_106772359	Not Available	596	Open in IMG/M
3300009792\|Ga0126374_10738008	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300009792\|Ga0126374_11625994	Not Available	535	Open in IMG/M
3300010046\|Ga0126384_12507098	Not Available	501	Open in IMG/M
3300010048\|Ga0126373_10543994	Not Available	1208	Open in IMG/M
3300010048\|Ga0126373_11476045	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300010048\|Ga0126373_13219826	Not Available	508	Open in IMG/M
3300010358\|Ga0126370_10226546	Not Available	1432	Open in IMG/M
3300010358\|Ga0126370_10556893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300010358\|Ga0126370_12130069	Not Available	551	Open in IMG/M
3300010359\|Ga0126376_10619415	Not Available	1027	Open in IMG/M
3300010359\|Ga0126376_10983864	Not Available	842	Open in IMG/M
3300010360\|Ga0126372_10643077	Not Available	1025	Open in IMG/M
3300010361\|Ga0126378_11847741	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300010362\|Ga0126377_11653235	Not Available	715	Open in IMG/M
3300010366\|Ga0126379_10916151	Not Available	979	Open in IMG/M
3300010376\|Ga0126381_101156199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300010376\|Ga0126381_102166901	Not Available	800	Open in IMG/M
3300010398\|Ga0126383_10234405	Not Available	1789	Open in IMG/M
3300010398\|Ga0126383_13327032	Not Available	525	Open in IMG/M
3300012948\|Ga0126375_10175471	Not Available	1380	Open in IMG/M
3300012971\|Ga0126369_12987430	Not Available	554	Open in IMG/M
3300016270\|Ga0182036_11107392	Not Available	656	Open in IMG/M
3300016294\|Ga0182041_10254645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1431	Open in IMG/M
3300016319\|Ga0182033_12068856	Not Available	519	Open in IMG/M
3300016341\|Ga0182035_10412407	Not Available	1137	Open in IMG/M
3300016371\|Ga0182034_10755440	Not Available	830	Open in IMG/M
3300016371\|Ga0182034_10851351	Not Available	782	Open in IMG/M
3300016371\|Ga0182034_11039494	Not Available	709	Open in IMG/M
3300016387\|Ga0182040_10551140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300016387\|Ga0182040_10660864	Not Available	851	Open in IMG/M
3300016387\|Ga0182040_10825082	Not Available	765	Open in IMG/M
3300016387\|Ga0182040_10907339	Not Available	731	Open in IMG/M
3300016404\|Ga0182037_10633361	Not Available	910	Open in IMG/M
3300016445\|Ga0182038_10436773	Not Available	1105	Open in IMG/M
3300018482\|Ga0066669_10553427	Not Available	1003	Open in IMG/M
3300021560\|Ga0126371_11732815	Not Available	748	Open in IMG/M
3300026316\|Ga0209155_1181173	Not Available	679	Open in IMG/M
3300027680\|Ga0207826_1048033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1183	Open in IMG/M
3300031543\|Ga0318516_10390845	Not Available	802	Open in IMG/M
3300031543\|Ga0318516_10822456	Not Available	524	Open in IMG/M
3300031545\|Ga0318541_10243167	Not Available	1000	Open in IMG/M
3300031545\|Ga0318541_10339088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300031546\|Ga0318538_10689967	Not Available	554	Open in IMG/M
3300031573\|Ga0310915_10008109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5988	Open in IMG/M
3300031573\|Ga0310915_10078856	Not Available	2185	Open in IMG/M
3300031573\|Ga0310915_10085474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2106	Open in IMG/M
3300031573\|Ga0310915_10124171	Not Available	1764	Open in IMG/M
3300031573\|Ga0310915_10273938	Not Available	1190	Open in IMG/M
3300031573\|Ga0310915_10279634	Not Available	1177	Open in IMG/M
3300031573\|Ga0310915_10279742	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031668\|Ga0318542_10522448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300031719\|Ga0306917_10903514	Not Available	691	Open in IMG/M
3300031744\|Ga0306918_10111981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1962	Open in IMG/M
3300031744\|Ga0306918_10361792	Not Available	1127	Open in IMG/M
3300031770\|Ga0318521_10734459	Not Available	600	Open in IMG/M
3300031797\|Ga0318550_10656007	Not Available	503	Open in IMG/M
3300031833\|Ga0310917_10338712	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031879\|Ga0306919_10154511	Not Available	1676	Open in IMG/M
3300031879\|Ga0306919_10255469	Not Available	1319	Open in IMG/M
3300031890\|Ga0306925_10102246	All Organisms → cellular organisms → Bacteria	3051	Open in IMG/M
3300031890\|Ga0306925_10298568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1733	Open in IMG/M
3300031890\|Ga0306925_11307038	Not Available	720	Open in IMG/M
3300031897\|Ga0318520_10796622	Not Available	593	Open in IMG/M
3300031910\|Ga0306923_10147344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2685	Open in IMG/M
3300031910\|Ga0306923_10239504	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300031910\|Ga0306923_11385387	Not Available	741	Open in IMG/M
3300031912\|Ga0306921_10580916	Not Available	1297	Open in IMG/M
3300031912\|Ga0306921_10728005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1138	Open in IMG/M
3300031912\|Ga0306921_11684797	Not Available	686	Open in IMG/M
3300031941\|Ga0310912_11117331	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031942\|Ga0310916_10435406	Not Available	1116	Open in IMG/M
3300031942\|Ga0310916_11437598	Not Available	564	Open in IMG/M
3300031946\|Ga0310910_10581232	Not Available	888	Open in IMG/M
3300031946\|Ga0310910_11327051	Not Available	555	Open in IMG/M
3300031947\|Ga0310909_10037296	All Organisms → cellular organisms → Bacteria → Proteobacteria	3650	Open in IMG/M
3300031954\|Ga0306926_11744570	Not Available	709	Open in IMG/M
3300032001\|Ga0306922_10579237	Not Available	1191	Open in IMG/M
3300032001\|Ga0306922_11019363	Not Available	853	Open in IMG/M
3300032010\|Ga0318569_10246764	Not Available	830	Open in IMG/M
3300032042\|Ga0318545_10250295	Not Available	636	Open in IMG/M
3300032059\|Ga0318533_10197034	Not Available	1441	Open in IMG/M
3300032261\|Ga0306920_102421787	Not Available	724	Open in IMG/M
3300032261\|Ga0306920_102465270	Not Available	716	Open in IMG/M
3300033289\|Ga0310914_10801317	Not Available	840	Open in IMG/M
3300033290\|Ga0318519_10441241	Not Available	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.30%
Loam	Environmental → Terrestrial → Soil → Loam	17.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_05749460	2070309004	Green-Waste Compost	MALARATDDPALKQYYEELALGLVQKAGSEPDPDNAAALLAIIKPDSGRH
prs_02547730	2070309004	Green-Waste Compost	MALARASDDPALKQYYEELAIGFVQKAGNEHDPDNTAALLATINPGSGNTNRRGR
AF_2010_repII_A1DRAFT_100870072	3300000597	Forest Soil	MTLARASDDPALKQYYEELALKFAEHAANEHDPDNTAALLTIIRPDSGNTRGR*
AF_2010_repII_A001DRAFT_101180952	3300000793	Forest Soil	MTLARASDDLALKQYYEELALKFAENAANEHDPDNTVPLPVKPDTGNXNRRGR*
Ga0066395_100210142	3300004633	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH*
Ga0066673_101394011	3300005175	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR*
Ga0066684_108999852	3300005179	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPNSGTTNRRGR*
Ga0066388_1002844443	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAENAANEHDPDNTSWRVSPSQADSGNTNRRGR*
Ga0066388_1013454873	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAESAANEHDPDNISWRVSSSQADSGNTNRHRR*
Ga0066388_1014393162	3300005332	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPYDAAALLAIIKPDSGKIPIDMSC*
Ga0066388_1025792262	3300005332	Tropical Forest Soil	MTLARASDDPTLKQYYEELALKFAENAANEDDPDNTAALLTTIKPDSGNTNRHER*
Ga0066388_1027871691	3300005332	Tropical Forest Soil	MALARASDGPVLKQYYEELALGFVQNARNEHDLDIITAPPLAIIEPKS
Ga0066388_1047189961	3300005332	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAALLAIYQARSGKHQ*
Ga0066388_1048019522	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAEHAANEHDQDNTAALLATIKPDSGNTNPHGR*
Ga0070697_1017130992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALARLSDDPALKQYYLELALEFVRNAGSERDLELLAASLATI
Ga0066699_112538341	3300005561	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDS
Ga0066705_106473851	3300005569	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRGGR*
Ga0066903_1011472424	3300005764	Tropical Forest Soil	MMLARASDDPALKQYYEELALKFAEHAANEYDPDNAAQLPIKSDGGSVNPQRRH*
Ga0066903_1028582882	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALMFAQNVANDHDPDDITVAPFANPDSGNTNWHGH*
Ga0066903_1034575802	3300005764	Tropical Forest Soil	MTLARASDDPVLKRYYEELALKFAENAANEHDPDNVPWRVSPIQADSGNANRHRR*
Ga0066903_1044441783	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAESAANEHDPDNIVARLVKPSR*
Ga0066903_1044524342	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR*
Ga0066903_1054565662	3300005764	Tropical Forest Soil	MTLARASNDPALKQYYEALALEFVEKAANEHDPDDNTVALSPTQADHGRQ*
Ga0066903_1055798682	3300005764	Tropical Forest Soil	QVCMTLARASDDPALKQYYEELALAFAQNAANEHDDITVAPFANPDSGNINRHESRQFIRP*
Ga0066903_1067723591	3300005764	Tropical Forest Soil	ASDDPALKQYYEELALKFAENAANEHDPDNTSWRVSPSQADSGNTNRRGR*
Ga0126374_107380083	3300009792	Tropical Forest Soil	LKQYYEELALKFAESAANEHDPDNISWRVSSSQADSGNTNRHRR*
Ga0126374_116259942	3300009792	Tropical Forest Soil	MTLGRAIDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH*
Ga0126384_121432702	3300010046	Tropical Forest Soil	MTLARASDDPTLKQYYEELALKFAENAANEDDPDNTAALLANRHGR*
Ga0126384_125070981	3300010046	Tropical Forest Soil	MTLARGSDDPALKQYYEELALKFAENAANEPDPDNAAAPLTTIKPDSGNTNRHER*
Ga0126373_105439942	3300010048	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHRY*
Ga0126373_114760452	3300010048	Tropical Forest Soil	MTLARASDDPVLKQYYEELALAFAQNAANEHDDITVAPFANPDSGNINRHGSRQFIRCP*
Ga0126373_132198262	3300010048	Tropical Forest Soil	MTLARGSNDPALKQYYEELALKFAENAANEHDPENTAPLPTKPDSGNTNHGRY*
Ga0126370_102265461	3300010358	Tropical Forest Soil	YDELALKFAENAAKEHDPDNIPLRVSPIQADSGNTNRHGR*
Ga0126370_105568933	3300010358	Tropical Forest Soil	KQYYEELALKFAENAASQHDPDNQYTVARLAHPSDSGYTNRHGR*
Ga0126370_121300692	3300010358	Tropical Forest Soil	MTLARSSDDPALKQYYEELALKFAENAANEHDSDNTAPLPIKPDSGNTNPQAH*
Ga0126376_106194151	3300010359	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSCNTNRHGH*
Ga0126376_109838642	3300010359	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPRPDSGNTNRHRY*
Ga0126372_106430771	3300010360	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFRNLDSGNTNRHGH*
Ga0126378_118477412	3300010361	Tropical Forest Soil	MTLARASDEPALKQYYEELALKFAENAANEHDHDNTASLPIKPDSGNANPHGRY*
Ga0126377_116532352	3300010362	Tropical Forest Soil	MTLARTSDDPALKQYYEELALKFAENAANEHDPDNTAPLPIKPDSGNTNPQGH*
Ga0126379_109161513	3300010366	Tropical Forest Soil	MTLARASDDPALKQYHEELALAFAQNAANEHDDITVVPFPNLDSRNTNRHGH*
Ga0126381_1011561992	3300010376	Tropical Forest Soil	MTLARTSDDPALKQYYEELTLKFAENAANEHDSDNTAPLPIKPDSGNTNPQGH*
Ga0126381_1021669011	3300010376	Tropical Forest Soil	NPALKQYYEELALKFVQNAGGERDPDNTDAPLPKPDSGNTNRHRY*
Ga0126383_102344051	3300010398	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHR*
Ga0126383_133270322	3300010398	Tropical Forest Soil	VLTCNSWRQAQVCMTLARATDDATLRQHYEELALKFAENAANEDDPDTLAPLANPSPIAATTNRHGR*
Ga0126375_101754713	3300012948	Tropical Forest Soil	MTLARTTDDAALRQYYEELALKFAENAANEYDPDNTAPLPIKPDSGNTNPQGH*
Ga0126369_129874301	3300012971	Tropical Forest Soil	MALARASDGPVLKQYYEELALGFVQNARNEHDLDIITAPPLAIIEPKSDS
Ga0182036_102911593	3300016270	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPD
Ga0182036_111073922	3300016270	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSGNTNRHGR
Ga0182041_102546453	3300016294	Soil	MTLARASDDPALKLYYEELALKFAQDAAENEHDPDDIPSRLTPTQAR
Ga0182033_120688561	3300016319	Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0182035_104124072	3300016341	Soil	MALAHASDDPALKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0182034_107554401	3300016371	Soil	MTLARASDDPELKQYYEELALEFVQNAGNEPDSDNTAALLAIIKPDSGNTNRHGRANKP
Ga0182034_108513511	3300016371	Soil	RASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0182034_110394943	3300016371	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDNAAALLAIIKPDSGRH
Ga0182040_105511403	3300016387	Soil	DDPALKLYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR
Ga0182040_106608641	3300016387	Soil	ASDDPALKQYYEELALKFVQNAANEHDPDDISSRVSPTQADSGNTNRHGR
Ga0182040_108250821	3300016387	Soil	MALARASDDPALKQYYEELALKFAQNAVGERDPDNTDAPLPKPDSGNTNRHRY
Ga0182040_109073392	3300016387	Soil	MSLARVSDDTVLKQRYEELALEFAKNAGDEPDLDITAPP
Ga0182037_106333611	3300016404	Soil	MALARATDDPALKQYCEEMALGFVQKARREPDPDNAAALLAIIKPDSGKYQ
Ga0182038_104367733	3300016445	Soil	MALARASDDPAVKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0066669_105534272	3300018482	Grasslands Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR
Ga0066669_110778511	3300018482	Grasslands Soil	MTLARASDDLALKQYYEELALKFAQNAANEHGPTIPATLLAIITR
Ga0126371_117328151	3300021560	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHRY
Ga0209155_11811733	3300026316	Soil	VCMALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR
Ga0207826_10480333	3300027680	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVEKAGNEHDPDNTAALLATIKPDSGNTNRHRR
Ga0318516_103908451	3300031543	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDDAAALLAIIKPDSGKYQ
Ga0318516_108224561	3300031543	Soil	MALARASDDPALKQYYEELALGFVQKAGSDLDPDNSAALLAVIKPDSGKHQ
Ga0318541_102431672	3300031545	Soil	MALARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSARH
Ga0318541_103390881	3300031545	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0318538_106899672	3300031546	Soil	MALARATDDPALKQYYEELALGSVQKAGSEPDPDNAAALLAIIKPDSGRH
Ga0310915_100081097	3300031573	Soil	MALARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSGRH
Ga0310915_100788562	3300031573	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSANRHGH
Ga0310915_100854742	3300031573	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDDATALLAIIEPDSGKYQ
Ga0310915_101241712	3300031573	Soil	MALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ
Ga0310915_102739383	3300031573	Soil	MTLARASDDPALKQYYEELALKFAQNAVNEHDDITVVPFRNLDSGNTNRHGH
Ga0310915_102796343	3300031573	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSRQHQ
Ga0310915_102797421	3300031573	Soil	MALARACDDPALKQYYEELALGFVQKAGNEFDPDNTAALLAKPDSGYTNRHRR
Ga0318542_105224481	3300031668	Soil	VCMALARASDDPVLKQYYEELALAFVQKAGSEPDPDNSAALLAIIKPDSGKHQ
Ga0306917_109035141	3300031719	Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGN
Ga0306918_101119813	3300031744	Soil	MALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGN
Ga0306918_103617922	3300031744	Soil	MTLARASDDPALKQYYEELALKFVQSAANEHDDITVAPFANPDSGNTNRHGRANKP
Ga0318521_107344591	3300031770	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAALLDDYVRSSRIR
Ga0318550_106560071	3300031797	Soil	ARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSARH
Ga0310917_103387121	3300031833	Soil	MALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGNTNRHGRHGR
Ga0306919_101545114	3300031879	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSTNRHGH
Ga0306919_102554693	3300031879	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSR
Ga0306925_101022463	3300031890	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSGYTNRHRR
Ga0306925_102985684	3300031890	Soil	RASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPDSGKTNRHGH
Ga0306925_113070381	3300031890	Soil	RASDDPTLKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0318520_107966222	3300031897	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDSDNTAAPLAIIKP
Ga0306923_101473443	3300031910	Soil	MTLARASDDPALKLYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR
Ga0306923_102395041	3300031910	Soil	MALARTTDDPALKQYYEELALGFVQKAGSEPDPDNSAALLAIIKPDSGKHQ
Ga0306923_113853872	3300031910	Soil	QAQVCMTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0306921_105809161	3300031912	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0306921_107280052	3300031912	Soil	MALARASDDPALKQYYEEMALRFVQNAANEHDPDDISSRVSPTQADSGNTNRHGR
Ga0306921_116847971	3300031912	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPDSGKTNRHGH
Ga0310912_111173312	3300031941	Soil	RVCMALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGNTNRHGRHG
Ga0310916_104354061	3300031942	Soil	MALARACDDPALKQYYEELALGFVQKAGNEFDPDNTAALLAKPDSGYTNRHR
Ga0310916_114375982	3300031942	Soil	ARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0310910_105812321	3300031946	Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFSNLDSCNTNRHRH
Ga0310910_113270512	3300031946	Soil	MALARASDDPALKQYYEELALKFVQNAGGERDPDNTEAPLLKPDSGNTSRHRY
Ga0310909_100372963	3300031947	Soil	MALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSCKHQ
Ga0306926_117445702	3300031954	Soil	ARASDDPALKQYYEELALKFARNAVNERDDITVVPFPNLDSGNTNRHGH
Ga0306922_105792372	3300032001	Soil	MALARASDDPALKQYYEELALKFAQNAVGERDPDNTDAPLPKPDSSNTNRHRY
Ga0306922_110193631	3300032001	Soil	MTLARASDDPALKQYYEELALKFAQYAAKEHDTDNIPWRVSPTQADRGNTNRYGR
Ga0318569_102467642	3300032010	Soil	MTLARASDDPALKLYYEKLALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH
Ga0318545_102502951	3300032042	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNRHGH
Ga0318533_101970341	3300032059	Soil	QARVCMALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ
Ga0306920_1024217872	3300032261	Soil	MALARASDDPALKQYYEELALGFVQKAGNEHDPDNTAALLATINPDSGNTNRRGR
Ga0306920_1024652702	3300032261	Soil	MALARASDDPVLKQYYEELALGFVQKAGSEPDPDDAAALLAIIKPDSGKYQ
Ga0310914_108013171	3300033289	Soil	MTLARASDDPALKQYYEELALKFAQNAVNEHDDITAVPFPDLDSGNTNR
Ga0318519_104412411	3300033290	Soil	VCMALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences