Metagenome / Metatranscriptome Family F082012

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082012
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	50 residues
Representative Sequence	VDAAPDTEHRPGQPRSERDAAFLKRYDTWMQLPIVVSAILPLVIVP
Number of Associated Samples	85
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.44 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.73 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.681 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.823 % of family members)
Environment Ontology (ENVO)	Unclassified (53.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.84% β-sheet: 0.00% Coil/Unstructured: 62.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09180	ProRS-C_1	8.85
PF01734	Patatin	5.31
PF00892	EamA	4.42
PF01545	Cation_efflux	3.54
PF00230	MIP	1.77
PF00871	Acetate_kinase	1.77
PF11139	SfLAP	1.77
PF13555	AAA_29	1.77
PF13561	adh_short_C2	0.88
PF02909	TetR_C_1	0.88
PF13183	Fer4_8	0.88
PF00549	Ligase_CoA	0.88
PF07228	SpoIIE	0.88
PF00440	TetR_N	0.88
PF00903	Glyoxalase	0.88
PF04542	Sigma70_r2	0.88
PF02156	Glyco_hydro_26	0.88
PF09900	DUF2127	0.88
PF13466	STAS_2	0.88
PF02073	Peptidase_M29	0.88
PF05199	GMC_oxred_C	0.88
PF00266	Aminotran_5	0.88
PF01909	NTP_transf_2	0.88
PF08450	SGL	0.88
PF01740	STAS	0.88
PF00877	NLPC_P60	0.88
PF13614	AAA_31	0.88
PF13185	GAF_2	0.88
PF10011	DUF2254	0.88
PF01872	RibD_C	0.88
PF08240	ADH_N	0.88
PF00202	Aminotran_3	0.88
PF00083	Sugar_tr	0.88
PF02597	ThiS	0.88
PF12833	HTH_18	0.88
PF04020	Phage_holin_4_2	0.88
PF06827	zf-FPG_IleRS	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	8.85
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	5.31
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	5.31
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	5.31
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	3.54
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	3.54
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	3.54
COG0282	Acetate kinase	Energy production and conversion [C]	1.77
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.77
COG3426	Butyrate kinase	Energy production and conversion [C]	1.77
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	0.88
COG0074	Succinyl-CoA synthetase, alpha subunit	Energy production and conversion [C]	0.88
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.88
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.88
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.88
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.88
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.88
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.88
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	0.88
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.68 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.68 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.68 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.18 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.98 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.20 %
Unclassified	root	N/A	28.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.32 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.73 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.54 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.54 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.77 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.73 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.54 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.65 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.77 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.73 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.77 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Tenggerimyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Tenggerimyces	0.88 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.88 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.88 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.77 %
Nonomuraea solani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	0.88 %
Tenggerimyces flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Tenggerimyces → Tenggerimyces flavus	0.88 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.88 %
Amycolatopsis azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	0.88 %
Catellatospora citrea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	0.88 %
Streptomyces yerevanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yerevanensis	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.77 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Nonomuraea solani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	0.88 %
Tenggerimyces flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Tenggerimyces → Tenggerimyces flavus	0.88 %
Amycolatopsis azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	0.88 %
Catellatospora citrea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	0.88 %
Streptomyces yerevanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yerevanensis	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084002\|DRAFT_c48551	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300004152\|Ga0062386_101088812	Not Available	663	Open in IMG/M
3300005437\|Ga0070710_10746225	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005439\|Ga0070711_100664652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300005764\|Ga0066903_105462386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300005764\|Ga0066903_106833945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces yerevanensis	593	Open in IMG/M
3300005764\|Ga0066903_107344982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	569	Open in IMG/M
3300006052\|Ga0075029_101130020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300006102\|Ga0075015_100873996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	544	Open in IMG/M
3300009792\|Ga0126374_10060229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1978	Open in IMG/M
3300009792\|Ga0126374_11331990	Not Available	581	Open in IMG/M
3300010043\|Ga0126380_11770402	Not Available	557	Open in IMG/M
3300010043\|Ga0126380_11915389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010047\|Ga0126382_10128355	Not Available	1697	Open in IMG/M
3300010048\|Ga0126373_12600703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	564	Open in IMG/M
3300010048\|Ga0126373_12706086	Not Available	553	Open in IMG/M
3300010339\|Ga0074046_10132535	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1596	Open in IMG/M
3300010359\|Ga0126376_10315135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1368	Open in IMG/M
3300010359\|Ga0126376_10805714	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300010360\|Ga0126372_10123128	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2009	Open in IMG/M
3300010360\|Ga0126372_11269493	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300010361\|Ga0126378_10112390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2712	Open in IMG/M
3300010361\|Ga0126378_10162570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2284	Open in IMG/M
3300010361\|Ga0126378_10203411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2057	Open in IMG/M
3300010361\|Ga0126378_13303277	Not Available	513	Open in IMG/M
3300010366\|Ga0126379_10111279	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2463	Open in IMG/M
3300010376\|Ga0126381_101886525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300010379\|Ga0136449_103300816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	620	Open in IMG/M
3300010398\|Ga0126383_12065769	Not Available	657	Open in IMG/M
3300010398\|Ga0126383_12101618	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300010398\|Ga0126383_12136536	Not Available	647	Open in IMG/M
3300010863\|Ga0124850_1029642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1756	Open in IMG/M
3300016270\|Ga0182036_10091720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2040	Open in IMG/M
3300016357\|Ga0182032_10056070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2584	Open in IMG/M
3300016445\|Ga0182038_10522366	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300016445\|Ga0182038_10679077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	895	Open in IMG/M
3300016445\|Ga0182038_11607519	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300017932\|Ga0187814_10048377	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1567	Open in IMG/M
3300017932\|Ga0187814_10234693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300017942\|Ga0187808_10529549	Not Available	548	Open in IMG/M
3300017955\|Ga0187817_10144513	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300017972\|Ga0187781_10124870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	1797	Open in IMG/M
3300017974\|Ga0187777_10494137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300018060\|Ga0187765_10172217	Not Available	1235	Open in IMG/M
3300020150\|Ga0187768_1060287	Not Available	848	Open in IMG/M
3300021377\|Ga0213874_10247858	Not Available	656	Open in IMG/M
3300021560\|Ga0126371_10169942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2256	Open in IMG/M
3300021560\|Ga0126371_12141576	All Organisms → cellular organisms → Bacteria → Terrabacteria group	674	Open in IMG/M
3300021560\|Ga0126371_12341779	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300021560\|Ga0126371_13904774	Not Available	502	Open in IMG/M
3300025910\|Ga0207684_11525577	Not Available	543	Open in IMG/M
3300025928\|Ga0207700_10037697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3503	Open in IMG/M
3300027703\|Ga0207862_1237781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300031544\|Ga0318534_10013027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4239	Open in IMG/M
3300031546\|Ga0318538_10063100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1844	Open in IMG/M
3300031546\|Ga0318538_10532023	Not Available	637	Open in IMG/M
3300031564\|Ga0318573_10306387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300031572\|Ga0318515_10561637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300031573\|Ga0310915_10919055	Not Available	613	Open in IMG/M
3300031668\|Ga0318542_10709855	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031679\|Ga0318561_10421227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300031713\|Ga0318496_10065887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300031718\|Ga0307474_11596432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300031719\|Ga0306917_10060303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2589	Open in IMG/M
3300031719\|Ga0306917_10109716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1993	Open in IMG/M
3300031723\|Ga0318493_10546296	Not Available	643	Open in IMG/M
3300031747\|Ga0318502_10107280	Not Available	1555	Open in IMG/M
3300031751\|Ga0318494_10568336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Tenggerimyces → Tenggerimyces flavus	662	Open in IMG/M
3300031765\|Ga0318554_10592536	Not Available	625	Open in IMG/M
3300031771\|Ga0318546_10017498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4016	Open in IMG/M
3300031781\|Ga0318547_10150668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1367	Open in IMG/M
3300031781\|Ga0318547_10842219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300031782\|Ga0318552_10642250	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031792\|Ga0318529_10447793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	601	Open in IMG/M
3300031793\|Ga0318548_10045043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1996	Open in IMG/M
3300031819\|Ga0318568_11059344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	501	Open in IMG/M
3300031821\|Ga0318567_10211580	Not Available	1084	Open in IMG/M
3300031831\|Ga0318564_10019423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2809	Open in IMG/M
3300031831\|Ga0318564_10053701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1756	Open in IMG/M
3300031831\|Ga0318564_10486732	Not Available	536	Open in IMG/M
3300031835\|Ga0318517_10080584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300031835\|Ga0318517_10233733	Not Available	829	Open in IMG/M
3300031845\|Ga0318511_10432739	Not Available	605	Open in IMG/M
3300031846\|Ga0318512_10753564	Not Available	501	Open in IMG/M
3300031859\|Ga0318527_10134910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300031859\|Ga0318527_10291240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300031880\|Ga0318544_10249548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300031890\|Ga0306925_11409372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	687	Open in IMG/M
3300031896\|Ga0318551_10103993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1514	Open in IMG/M
3300031910\|Ga0306923_10959810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	932	Open in IMG/M
3300031912\|Ga0306921_10664751	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300031942\|Ga0310916_10918684	Not Available	733	Open in IMG/M
3300031945\|Ga0310913_10545111	Not Available	823	Open in IMG/M
3300031954\|Ga0306926_12953571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300031959\|Ga0318530_10167122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300032001\|Ga0306922_10431635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1409	Open in IMG/M
3300032001\|Ga0306922_11795237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300032009\|Ga0318563_10512340	Not Available	648	Open in IMG/M
3300032043\|Ga0318556_10365358	Not Available	755	Open in IMG/M
3300032055\|Ga0318575_10032386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2300	Open in IMG/M
3300032065\|Ga0318513_10034271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2211	Open in IMG/M
3300032066\|Ga0318514_10361137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	770	Open in IMG/M
3300032068\|Ga0318553_10110608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1406	Open in IMG/M
3300032076\|Ga0306924_11859290	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300032076\|Ga0306924_12221517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300032089\|Ga0318525_10341663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	768	Open in IMG/M
3300032089\|Ga0318525_10680470	Not Available	524	Open in IMG/M
3300032090\|Ga0318518_10391665	Not Available	713	Open in IMG/M
3300032261\|Ga0306920_101463201	Not Available	977	Open in IMG/M
3300032805\|Ga0335078_12115405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	597	Open in IMG/M
3300032954\|Ga0335083_10320681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1353	Open in IMG/M
3300033158\|Ga0335077_11762823	Not Available	583	Open in IMG/M
3300033289\|Ga0310914_11093157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.04%
Aquatic	Environmental → Aquatic	7.08%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.04%
Freshwater	Environmental → Aquatic → Freshwater	5.31%
Sediment	Environmental → Aquatic → Sediment	1.77%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.99%
Loam	Environmental → Terrestrial → Soil → Loam	7.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Subtropical Soil	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Subtropical Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084002	Subtropical soil microbial communities from Bundaberg Australia-sugarcane farm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DRAFT_00598290	2222084002	Subtropical Soil	VDVAAATEHRAGQPRSERDAAFLARFDARMQLTKKK
Ga0062386_1010888121	3300004152	Bog Forest Soil	VTVDVISAIGHRPGQPRSERDAAFLERFGARMRLPIIVSAI
Ga0070710_107462252	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VPVDVVSDAERRPGQPRSERSAAFLKRYDTWMQVPIIVSAILPL
Ga0070711_1006646522	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VDVASATAPPPGQPRSERDAAFLERFDAWMQLPIVVSAILPLVIIP
Ga0066903_1054623861	3300005764	Tropical Forest Soil	VDVAPETEHRPGQPRSERDAAYLERYNTWMQVPIVVSAILPLVIVPQSNGWVGAVVGVVT
Ga0066903_1068339452	3300005764	Tropical Forest Soil	VDAAPDTEHRPGQPRSERDAAFLKRYDTWMQLPIVVSAILPLVIVP
Ga0066903_1073449823	3300005764	Tropical Forest Soil	VPVDVVSDGEHRPGQPRSDRDAAFLKRYDTWMQVPIIVSAILPLVIVPTN
Ga0075029_1011300202	3300006052	Watersheds	VDAAPPTAPRPGQPRSERDAAFLERFDAWMQLPIVV
Ga0075015_1008739962	3300006102	Watersheds	VDATAEREHGPGLPRSEADAAFLKRFDAWMQLPIIVSAILPLIVAPE
Ga0126374_100602291	3300009792	Tropical Forest Soil	VNVTLETGHRPGQARSDRDAAFLERFNARMRLPIIVSAILPLIVVPE
Ga0126374_113319902	3300009792	Tropical Forest Soil	VGAAPETEHRPGQARSERDAAFLKRYNAWMQVPIVVSAVLPLVIVPES
Ga0126380_117704021	3300010043	Tropical Forest Soil	VDVAPATKRRPGQPRSERDATFLKRYDTWMQLPIIVSAVLPLVI
Ga0126380_119153891	3300010043	Tropical Forest Soil	VDVASETEHRPGQPCSERDASFLELYNPWMQVRIVVSAILPLVIVPQSNGWVGAVI
Ga0126382_101283551	3300010047	Tropical Forest Soil	VNVTPGTGHRAGQARSDRDAAFVERFNARMRLPIIVSAILPLIVVP
Ga0126373_126007032	3300010048	Tropical Forest Soil	VDAAPGTELRPGQPRSERDAAILKRFDTMMQLPIIVSAILPLLVVPEMTALR
Ga0126373_127060862	3300010048	Tropical Forest Soil	VDVVSDPVRRPGQPRSERDAAFLKRYDTWMQVPIIVSAI
Ga0074046_101325351	3300010339	Bog Forest Soil	VDVISEIEHRPGRPRSERDAAFLQRFGARMRLPIIVSAILPLIV
Ga0126376_103151351	3300010359	Tropical Forest Soil	VDVASETEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLLIVPQSNGWVGAVV
Ga0126376_108057141	3300010359	Tropical Forest Soil	VGAAPETEPRPGQARSERDAAFLKRYNAWMQVPIVVSAVLPLVIVPESNG
Ga0126372_101231281	3300010360	Tropical Forest Soil	VDAAAPETERRPGQPRSERDAAFLKRFDAVMQLPIIVSAILPLLVVPQSTGWVGIVIG
Ga0126372_112694931	3300010360	Tropical Forest Soil	VAVDVVSDAERRPGQPRSERDAAFLKRYDTWMQVPIIVSAVLPLVIVP
Ga0126378_101123901	3300010361	Tropical Forest Soil	VDVASATAPRPGQPRSERDAAFLERFNTRMQLPIVVSAILPLVIVPESNGWVGVVVGVVTWLVF
Ga0126378_101625701	3300010361	Tropical Forest Soil	VDVVSDQERRPGQPRSERDAAFLKRYDTWMQVPIIVSAILPLVIVASNNGWVGAVVGVV
Ga0126378_102034111	3300010361	Tropical Forest Soil	VDVASETEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNGWVGAVVGVVT
Ga0126378_133032771	3300010361	Tropical Forest Soil	VDVLPGIAHRPGQPRSERDAAFLKRYDTWMQVPIFVSAVLPLVIVPSSNGWVGVVVGVVTWLVFLV
Ga0126379_101112791	3300010366	Tropical Forest Soil	VDVAPETEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNVWV
Ga0126381_1018865251	3300010376	Tropical Forest Soil	VDPAPTTEIRPGQPRSEADAAFLERFDARMRLPIIISAILPLV
Ga0136449_1033008161	3300010379	Peatlands Soil	VNVTAEIEHRPGQPRSERDAAFLKRFDAAMRLPIIVSAILPLIVA
Ga0126383_120657691	3300010398	Tropical Forest Soil	VDVTAEREHRPGHPRSEHDAAFLERFDAWMQLPIIVSAIL
Ga0126383_121016182	3300010398	Tropical Forest Soil	VGAAPETEHRPGQARSERDAAFLKRYNAWMQVPIIVSAVLPLVIVPESNGWVGVVI
Ga0126383_121365362	3300010398	Tropical Forest Soil	VDVAPDAEPRPGQPRSERDAAFLERFNARMQLPIVVSAVLPLV
Ga0124850_10296421	3300010863	Tropical Forest Soil	VIWHDRGRGRHVVSDGEHRPGQPRSERDAAFLKRYDTWMQVPIIVSAVLPLVIVPTNDGWVGAVVGVVTWLVFL
Ga0182036_100917201	3300016270	Soil	VHDTASTERRPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESGNWVGKVVGVATWLVF
Ga0182032_100560701	3300016357	Soil	VDVTPSTERRPGQPRSERDAAFMERFNARMRLPIIVSA
Ga0182038_105223661	3300016445	Soil	VAVDVISEPQRRPGQPRSERDAAFLKRYDTWMQVPIIISAVLPLVIVPSNDGWVGAVVGVVTWLVFLV
Ga0182038_106790771	3300016445	Soil	VHATASTERRPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESGN
Ga0182038_116075191	3300016445	Soil	VDVISETRHQWGQPRSERDAALLERFNARMRLPIVASAIL
Ga0187814_100483771	3300017932	Freshwater Sediment	VDDIPDIKHRPGQPRSERDAAFAERFDARMRLPIIVSAILPLVVAPGSHGWVGAV
Ga0187814_102346932	3300017932	Freshwater Sediment	VDSPPEVELRPGQPRSEIDAAFIRRFETRMRLPIIISAIL
Ga0187808_105295491	3300017942	Freshwater Sediment	VAVDVVSDGERRPGQPRSERDAAFLKRYNTWMQVPIIVSAILPLVIVPSNDGWVGALVGI
Ga0187817_101445131	3300017955	Freshwater Sediment	VNVTPETAHRPGQPRSEGDAAFLERFDARMRLPII
Ga0187781_101248701	3300017972	Tropical Peatland	VDVSPELEHRPGQPRSERDAAFLKGFDARMRVPIIVSAILPLIIVPE
Ga0187777_104941372	3300017974	Tropical Peatland	VTAEAEHRPGQPRSERDAAFLERFDARMRLPIIVSAILPLIVVP
Ga0187765_101722171	3300018060	Tropical Peatland	VDAAPDIEPRPGQPRSERDAAFLKRFDTVMQLPIIVSAILPLLVVPESNGWVGVVIGVVTWLVF
Ga0187768_10602872	3300020150	Tropical Peatland	VDKEPRPGQPRSGRDAAFLQRFESRMAVPIIISAILPLVVAPESNGWVGIVIGVATWLVFLLDYVVHT
Ga0213874_102478583	3300021377	Plant Roots	MTSAREHRQGGPRSGRDAATLERFDRRMQLPIVVSAVL
Ga0126371_101699424	3300021560	Tropical Forest Soil	VEVATETGHRPGQPRSERDAAYLERYNTWMQVPIVASAILPLVIVPQSNGWVGAVVGVVTWLVFLFDYVVHTRRLE
Ga0126371_121415762	3300021560	Tropical Forest Soil	VNAAAPETERRPGQPRSERDAAFLKRFDAVMQLPIIVSA
Ga0126371_123417792	3300021560	Tropical Forest Soil	VGVASETEHRPGQPRSERDAAYLERFNTWMQLPIIVSAILPLVIVPQSNGWVGLVVGVATWLVFVLDYVVHAR
Ga0126371_139047741	3300021560	Tropical Forest Soil	VDAAPEVETRPGQPRSERDAAFLKRFDAVMQLPIIV
Ga0207684_115255772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VDVAPGTGHRPGQPRSQRDAAFLERYNTWMQLPIVVSAVLPLVIVPQS
Ga0207700_100376976	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VDVASATAPPPGQPRSERDAAFLERFDAWMQLPIVVS
Ga0207862_12377812	3300027703	Tropical Forest Soil	MDAALAAEIQPGQPRSEKDADYLVRYDRRMRIPIIVSAILPLIIIPQDNGWVGIVVGVVTWLVFAVDYVVHVRRRSPY
Ga0318534_100130271	3300031544	Soil	VDAAPELEHRPGQPRSERDAAFLKRYDTRMQLPIVV
Ga0318538_100631001	3300031546	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNGWVGAVVGVVTWLVF
Ga0318538_105320231	3300031546	Soil	VDPVPETRPGEPRSAGDAAYLERFEHRMRVPIIVSAVLP
Ga0318573_103063872	3300031564	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNGWVGAVVGVVTWLVFLFD
Ga0318515_105616371	3300031572	Soil	MDVAPVTEPRPGQPRSERDAAFLERFDAWMQLPIIVSAVLPLVIIPEGDGWLGVVVGVVTWLVFLV
Ga0310915_109190552	3300031573	Soil	VAVDVVFDPVRRPGQPRSERDAAFLKRYDTWMQLPIVVSALLPLVVVPGSNGWVGVVVGVVT
Ga0318542_107098552	3300031668	Soil	VDVSPAIELRPGQPRSGRDAAFLERFNTRMRLPIIVSAILPLIIVPESNGWVGVVVGIVTWLVF
Ga0318561_104212273	3300031679	Soil	VNVTPETGHRQGQPRSDHDAAFLERFNARMRLPIIVSAI
Ga0318496_100658873	3300031713	Soil	VGVASETEHRPGQPRSERDAAYLERFNTWMQLPIIVS
Ga0307474_115964322	3300031718	Hardwood Forest Soil	VDVASATAPPPGQPRSERDAAFLERFDAWMQLPIVVSAILPLVIIPESNGWVGVVVGVVT
Ga0306917_100603031	3300031719	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSAILPLIVVPGPDSPVGIV
Ga0306917_101097163	3300031719	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNGWVGAVV
Ga0318493_105462961	3300031723	Soil	VAVDVVSSTWHRPGQPRSERDAAFLKRYDKWMEVPIFVSAVLPLVIVPSSN
Ga0318502_101072801	3300031747	Soil	VAVDAVSGEVRRPGQPRSERDAAFLKRYDKWMEVPIFVSAVLPLVIVPSANGWVGTVVGIVTWLVFLVD
Ga0318494_105683362	3300031751	Soil	VTPEAATPEAGHRPGDPRSERDAAFLERFDTRMRLPIIVSAVLPL
Ga0318554_105925362	3300031765	Soil	VTSEAEHRPGQPRSGRDAAFMERFNARMRLPIIVSAILP
Ga0318546_100174981	3300031771	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSAILPLIVVPGPDSPVG
Ga0318547_101506683	3300031781	Soil	VHATASTERRPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESGNWVG
Ga0318547_108422192	3300031781	Soil	VAVDVVSDGERRPGQPRSERSAAFLKRYDTWMQVPIIVSAVLPLVIVPTDNGWVGAVVGVVTWLVFLVDYAVHV
Ga0318552_106422502	3300031782	Soil	VAVDVVSDGERRPGQPRSERSAAFLKRYDTWMQVPII
Ga0318529_104477931	3300031792	Soil	VDATAETKRRPGQPRSERDAAFLKRFDARMQLPII
Ga0318548_100450431	3300031793	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLV
Ga0318568_110593442	3300031819	Soil	VTSEAEHRPGQPRSGRDAAFMERFNARMRLPIIVSAILPLVVVPESNGW
Ga0318567_102115803	3300031821	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSAILPLIVVPGPDSPVGI
Ga0318564_100194234	3300031831	Soil	VDVAPVPAHRPGQPRSERDAALLERFDTRMQLPIVVSAILPLVIVP
Ga0318564_100537013	3300031831	Soil	VGVASETEHRPGQPRSERDAAYLERFNTWMQLPIIVSAILPLVIVPQS
Ga0318564_104867321	3300031831	Soil	VAVDVVSSTGHRPGQPRSERDAAFLKRYDKWMEVPIFVSAVLPLVIVPSSNGWVG
Ga0318517_100805841	3300031835	Soil	VDVSPAIELQPGQPRSGRDAAFLERFNARMRVPIIVSAILPLI
Ga0318517_102337332	3300031835	Soil	VAVDVVSDPVRRPGQPRSARDATFLKRYDTWMQLPIVVSAI
Ga0318511_104327393	3300031845	Soil	VNVTPETGHRPGQPRSDRDAAFLERFNARMRLPIIVSA
Ga0318512_107535641	3300031846	Soil	VDVAPETEHRPGQPRSERDAAFLERFSARMQLPIIVSAVLPLVIVPE
Ga0318527_101349103	3300031859	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSAILPLIVVPGPDSPVGIVV
Ga0318527_102912401	3300031859	Soil	VHATASTERRPGQPRSDGDAAFLARFEPRMRLPIIV
Ga0318544_102495481	3300031880	Soil	MDAVASTGHLPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESG
Ga0306925_114093722	3300031890	Soil	MDAVASTGHLPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESGNWV
Ga0318551_101039931	3300031896	Soil	VDAVPELGPRPGQPRSERDAAFLKRFDAVMEVPIIVSAILPLL
Ga0306923_109598103	3300031910	Soil	VDVAPETGHQPGQPRSERDAAFLQRYNTWMQLPIVASAILPLVIVPESNGWVGAVVG
Ga0306921_106647511	3300031912	Soil	VAVDVVSDGERRPGQPRSERSAAFLKRYDTWMQVPIIVSAVLPLV
Ga0310916_109186842	3300031942	Soil	VDVAPVPAHRPGQPRSERDAALLERFDTRMQLPIVVSAILPLVI
Ga0310913_105451112	3300031945	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSAIL
Ga0306926_129535711	3300031954	Soil	VDVVSGTERRPGQPRSDRDAAFLKRYDTWMQVPIIVSAVLPLVIVPSNDGWVGAVV
Ga0318530_101671221	3300031959	Soil	VGVASETEHRPGQPRSERDAAYLERFNTWMQLPIIVSAILPLVIVPQSNGWVGLVVGVVTWLVFVLDYVV
Ga0306922_104316353	3300032001	Soil	VDVTTETEPLPGLPRSDRDAAFMKRYEAWMQLPIIVSA
Ga0306922_117952371	3300032001	Soil	VNVTPETGHRQGQPRSDHDAAFLERFNARMRLPIIVSAILPLIVVPE
Ga0318563_105123402	3300032009	Soil	VDPVPETRPGEPRSAGDAAYLERFEHRMRVPIIVSAVLPL
Ga0318556_103653581	3300032043	Soil	VAVDVVSDGERRPGQPRSERSAAFLKRYDTWMQVPIN
Ga0318575_100323863	3300032055	Soil	VDAAPELEHRPGQPRSERDAAFLKRYDTRMQLPIVVSAILPL
Ga0318513_100342711	3300032065	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSAILPLVIVPQSNG
Ga0318514_103611371	3300032066	Soil	VDVAPETGHQPGQPRSERDAAFLQRYNTWMQLPIVASAILPLVIVPESNGWVGAVVGVVTWLVFLFDYVVH
Ga0318553_101106081	3300032068	Soil	VDVASKTEHRPGQPRSERDAAFLERYNTWMQVPIVVSA
Ga0306924_118592902	3300032076	Soil	VDVVSEPERRPGQPRSERDAAFLKRYDTWMQVPIIVSAVLPLVIV
Ga0306924_122215171	3300032076	Soil	VAVDVVSDGERRPGQPRSERSAAFLKRYDTWMQVPIIVSAVLPLVIVP
Ga0318525_103416631	3300032089	Soil	VHDTASTERRPGQPRSDGDAAFLARFEPRMRLPIIVSALLPLIIVPESGNWVGKVVGVATWLVFVLDY
Ga0318525_106804701	3300032089	Soil	VAVDAVSGEVRRPGQPRSERDVAFLKRYDKWMEVP
Ga0318518_103916651	3300032090	Soil	VAVDVVSDPVRRPGQPRSERDAAFLKRYDTWMQLPIVVSALLPLVVVPGSNGWVGVV
Ga0306920_1014632011	3300032261	Soil	VAVDVVSSTGHRPGQPRSERDAAFLKRYDKWMEVPIFVSAVLPLVIVPSSNGWVGDVVGVVTWLVFLV
Ga0335078_121154051	3300032805	Soil	MDGTSEAKPRPGQPRSERDAEFMRRFEARMALPIVISAILPLVVAPESNGWVG
Ga0335083_103206811	3300032954	Soil	VDAASETGHRPGQPRSERDAAFLKRYNTWMQLPIIVSAVLPLVIVPESTGWVGVVVGVVTWLVFRYRCSGAARGLPGE
Ga0335077_117628232	3300033158	Soil	VDAANPETGPRPGQPRSERDAAFLKRFDTVMQLPIIVSAVLPLLVVPQSNG
Ga0310914_110931572	3300033289	Soil	VGVASETEHRPGQPRSERDAAYLERFNTWMQLPIIVSAILPLVIVPQSNGWVGLVVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082012

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences