Metagenome Family F082075

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082075
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	70 residues
Representative Sequence	MPHVILRFRLPDEQTEFNAAMQGADAKAAIWQVDQYCRSVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Number of Associated Samples	51
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.52 %
% of genes near scaffold ends (potentially truncated)	18.58 %
% of genes from short scaffolds (< 2000 bps)	52.21 %
Associated GOLD sequencing projects	38
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.106 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (64.602 % of family members)
Environment Ontology (ENVO)	Unclassified (88.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (84.071 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.98% β-sheet: 0.00% Coil/Unstructured: 51.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00589	Phage_integrase	15.93
PF04448	DUF551	6.19
PF13495	Phage_int_SAM_4	6.19
PF05866	RusA	3.54
PF02562	PhoH	2.65
PF13479	AAA_24	2.65
PF01844	HNH	2.65
PF02899	Phage_int_SAM_1	1.77
PF03819	MazG	1.77
PF14528	LAGLIDADG_3	1.77
PF02768	DNA_pol3_beta_3	1.77
PF05876	GpA_ATPase	0.88
PF00583	Acetyltransf_1	0.88
PF12728	HTH_17	0.88
PF08774	VRR_NUC	0.88
PF01726	LexA_DNA_bind	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	3.54
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	2.65
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	2.65
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	1.77
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.77
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.77
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
All Organisms	root	All Organisms	23.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
cellular organisms	root	All Organisms → cellular organisms	13.27 %
Viruses	superkingdom	All Organisms → Viruses	10.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.27 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.62 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.54 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.77 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.73 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.77 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	1.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.77 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.73 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	1.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.77 %
Haliea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea	1.77 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.73 %
unclassified Haliea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea	1.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.77 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.88 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.88 %
Pirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.73 %
Haliea sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.	1.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.77 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.88 %
unclassified Pirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula	0.88 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.73 %
Haliea sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.	1.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.77 %
Pirellula sp. SH-Sr6A	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	0.88 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.88 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100172810	Not Available	2406	Open in IMG/M
3300002835\|B570J40625_100810972	Not Available	821	Open in IMG/M
3300002835\|B570J40625_101650014	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300004772\|Ga0007791_10199086	Not Available	572	Open in IMG/M
3300009068\|Ga0114973_10001304	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18676	Open in IMG/M
3300009068\|Ga0114973_10050706	Not Available	2450	Open in IMG/M
3300009068\|Ga0114973_10290496	Not Available	873	Open in IMG/M
3300009151\|Ga0114962_10116887	Not Available	1640	Open in IMG/M
3300009151\|Ga0114962_10306528	Not Available	884	Open in IMG/M
3300009152\|Ga0114980_10000239	All Organisms → cellular organisms → Bacteria	38389	Open in IMG/M
3300009152\|Ga0114980_10327127	Not Available	887	Open in IMG/M
3300009154\|Ga0114963_10003707	Not Available	10471	Open in IMG/M
3300009154\|Ga0114963_10009582	Not Available	6587	Open in IMG/M
3300009154\|Ga0114963_10011505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5999	Open in IMG/M
3300009154\|Ga0114963_10012861	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5657	Open in IMG/M
3300009154\|Ga0114963_10020628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.	4390	Open in IMG/M
3300009154\|Ga0114963_10021179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4328	Open in IMG/M
3300009154\|Ga0114963_10024891	Not Available	3971	Open in IMG/M
3300009154\|Ga0114963_10031218	Not Available	3509	Open in IMG/M
3300009154\|Ga0114963_10049651	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2685	Open in IMG/M
3300009154\|Ga0114963_10057907	Not Available	2451	Open in IMG/M
3300009154\|Ga0114963_10070027	Not Available	2196	Open in IMG/M
3300009154\|Ga0114963_10147320	Not Available	1400	Open in IMG/M
3300009154\|Ga0114963_10189175	Not Available	1198	Open in IMG/M
3300009154\|Ga0114963_10223437	Not Available	1079	Open in IMG/M
3300009154\|Ga0114963_10281644	Not Available	932	Open in IMG/M
3300009154\|Ga0114963_10419137	Not Available	723	Open in IMG/M
3300009155\|Ga0114968_10006794	Not Available	8415	Open in IMG/M
3300009159\|Ga0114978_10776715	Not Available	541	Open in IMG/M
3300009164\|Ga0114975_10332671	Not Available	837	Open in IMG/M
3300009180\|Ga0114979_10001122	All Organisms → cellular organisms → Bacteria	17855	Open in IMG/M
3300009182\|Ga0114959_10025520	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	3673	Open in IMG/M
3300009184\|Ga0114976_10524524	Not Available	608	Open in IMG/M
3300009684\|Ga0114958_10006261	Not Available	7910	Open in IMG/M
3300009684\|Ga0114958_10163585	Not Available	1123	Open in IMG/M
3300010157\|Ga0114964_10098035	Not Available	1457	Open in IMG/M
3300010334\|Ga0136644_10025890	Not Available	3925	Open in IMG/M
3300010334\|Ga0136644_10036227	Not Available	3247	Open in IMG/M
3300010334\|Ga0136644_10036389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3238	Open in IMG/M
3300010334\|Ga0136644_10184605	Not Available	1252	Open in IMG/M
3300010334\|Ga0136644_10639836	Not Available	582	Open in IMG/M
3300010885\|Ga0133913_10470377	Not Available	3316	Open in IMG/M
3300010885\|Ga0133913_11905829	Not Available	1482	Open in IMG/M
3300010885\|Ga0133913_11915703	Not Available	1477	Open in IMG/M
3300010885\|Ga0133913_13362085	Not Available	1050	Open in IMG/M
3300013004\|Ga0164293_10026225	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4855	Open in IMG/M
3300013005\|Ga0164292_10057195	Not Available	3047	Open in IMG/M
3300013286\|Ga0136641_1001234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10800	Open in IMG/M
3300013286\|Ga0136641_1003909	Not Available	5675	Open in IMG/M
3300013286\|Ga0136641_1012925	Not Available	2711	Open in IMG/M
3300013286\|Ga0136641_1165271	Not Available	594	Open in IMG/M
3300013286\|Ga0136641_1171974	Not Available	580	Open in IMG/M
3300013286\|Ga0136641_1180203	Not Available	563	Open in IMG/M
3300013286\|Ga0136641_1187309	Not Available	550	Open in IMG/M
3300020157\|Ga0194049_1223791	Not Available	512	Open in IMG/M
3300020229\|Ga0194042_1047656	Not Available	1130	Open in IMG/M
3300021071\|Ga0194058_10278592	Not Available	546	Open in IMG/M
3300021072\|Ga0194057_10002983	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	8035	Open in IMG/M
3300021074\|Ga0194044_10031775	Not Available	2234	Open in IMG/M
3300021438\|Ga0213920_1004475	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	5455	Open in IMG/M
3300023184\|Ga0214919_10391490	Not Available	906	Open in IMG/M
3300023184\|Ga0214919_10584862	Not Available	663	Open in IMG/M
3300025578\|Ga0208864_1142631	Not Available	532	Open in IMG/M
3300027708\|Ga0209188_1039048	Not Available	2196	Open in IMG/M
3300027712\|Ga0209499_1000184	Not Available	46230	Open in IMG/M
3300027734\|Ga0209087_1005442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6824	Open in IMG/M
3300027741\|Ga0209085_1000452	Not Available	30134	Open in IMG/M
3300027741\|Ga0209085_1003548	All Organisms → cellular organisms → Bacteria → PVC group	8533	Open in IMG/M
3300027741\|Ga0209085_1004509	Not Available	7473	Open in IMG/M
3300027741\|Ga0209085_1005317	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6789	Open in IMG/M
3300027741\|Ga0209085_1008664	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5174	Open in IMG/M
3300027741\|Ga0209085_1009219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4994	Open in IMG/M
3300027741\|Ga0209085_1025784	Not Available	2809	Open in IMG/M
3300027741\|Ga0209085_1033530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.	2425	Open in IMG/M
3300027741\|Ga0209085_1035176	Not Available	2363	Open in IMG/M
3300027741\|Ga0209085_1047935	Not Available	1984	Open in IMG/M
3300027741\|Ga0209085_1063141	Not Available	1690	Open in IMG/M
3300027741\|Ga0209085_1071480	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1571	Open in IMG/M
3300027741\|Ga0209085_1111703	Not Available	1191	Open in IMG/M
3300027741\|Ga0209085_1112901	Not Available	1183	Open in IMG/M
3300027741\|Ga0209085_1114029	Not Available	1176	Open in IMG/M
3300027741\|Ga0209085_1127525	Not Available	1094	Open in IMG/M
3300027741\|Ga0209085_1281320	Not Available	640	Open in IMG/M
3300027747\|Ga0209189_1000780	All Organisms → cellular organisms → Bacteria	25007	Open in IMG/M
3300027747\|Ga0209189_1171988	Not Available	912	Open in IMG/M
3300027747\|Ga0209189_1187570	Not Available	860	Open in IMG/M
3300027747\|Ga0209189_1351989	Not Available	558	Open in IMG/M
3300027749\|Ga0209084_1232221	Not Available	726	Open in IMG/M
3300027763\|Ga0209088_10003073	Not Available	9945	Open in IMG/M
3300027777\|Ga0209829_10153695	Not Available	1048	Open in IMG/M
3300027782\|Ga0209500_10446557	Not Available	510	Open in IMG/M
3300027963\|Ga0209400_1001105	Not Available	22633	Open in IMG/M
3300027971\|Ga0209401_1000675	Not Available	22991	Open in IMG/M
3300027973\|Ga0209298_10000164	All Organisms → cellular organisms → Bacteria	40767	Open in IMG/M
3300027973\|Ga0209298_10243158	Not Available	719	Open in IMG/M
3300033993\|Ga0334994_0099338	Not Available	1712	Open in IMG/M
3300033993\|Ga0334994_0275124	Not Available	868	Open in IMG/M
3300033994\|Ga0334996_0406158	Not Available	638	Open in IMG/M
3300033994\|Ga0334996_0504247	Not Available	541	Open in IMG/M
3300034018\|Ga0334985_0010850	Not Available	7212	Open in IMG/M
3300034018\|Ga0334985_0161365	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1519	Open in IMG/M
3300034018\|Ga0334985_0201161	Not Available	1317	Open in IMG/M
3300034061\|Ga0334987_0058607	Not Available	3141	Open in IMG/M
3300034062\|Ga0334995_0078565	Not Available	2572	Open in IMG/M
3300034092\|Ga0335010_0349974	Not Available	827	Open in IMG/M
3300034102\|Ga0335029_0132422	Not Available	1725	Open in IMG/M
3300034104\|Ga0335031_0426566	Not Available	826	Open in IMG/M
3300034106\|Ga0335036_0008725	Not Available	8381	Open in IMG/M
3300034106\|Ga0335036_0176329	Not Available	1501	Open in IMG/M
3300034118\|Ga0335053_0006642	All Organisms → cellular organisms → Bacteria	8313	Open in IMG/M
3300034279\|Ga0335052_0182348	Not Available	1219	Open in IMG/M
3300034284\|Ga0335013_0043612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3277	Open in IMG/M
3300034284\|Ga0335013_0254481	Not Available	1138	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	94.69%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.42%
Creek	Environmental → Aquatic → Freshwater → Creek	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	94.69%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	64.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	19.47%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.19%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.42%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental	Open in IMG/M
3300021071	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17m	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021074	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17m	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1001728102	3300002835	Freshwater	MPHVILRFRLPEEQAEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
B570J40625_1008109721	3300002835	Freshwater	PSRVAFHFLESGMPHVILRFRLPEEQAEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
B570J40625_1016500142	3300002835	Freshwater	STLGIWNMHAILRFRLPEEQTEFNAAMQGREAKAAIWAVDQHCRNILKHGEPSEETRQQLEQIRDLLRERPGLLDD*
Ga0007791_101990862	3300004772	Freshwater	MPHVIIRFRLPDEQVEFNAAMQGREAKGMIWSVDQYCRNILKHGEPSGDVRKHLEWIRDMLRERPELLDD*
Ga0114973_100013049	3300009068	Freshwater Lake	MPHVIIRFRLPEEQPEFDAAMQGRDAKAVIWAVDQHCRSILKHGEPSEETRQQIEQIREMLRESPGLLDD*
Ga0114973_100507063	3300009068	Freshwater Lake	VSPTPPGGVLYSQNTKMHAILRFRLPDEQAEFTAAMQGADAKSVLWQVDQYCRNIIKHGSQGDLVAMHLETIREMLRERPGLLDD*
Ga0114973_102904961	3300009068	Freshwater Lake	MPHAFIRYRLPDEQAEFTAAMQGGAAKATLWAVDQYCRNILKHGEPSDEVRKHLEWVREMLRERPGLLDD*
Ga0114962_101168873	3300009151	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETAKHFERIREMLRERPGLLDD*
Ga0114962_103065281	3300009151	Freshwater Lake	LGGVPYSGIKKMHVILRFRLPDEQTELNAAMQGREAKGVIWSVDQYCRNILKHGEPSDEVRKHLEWVRDMLRERPGLLDD*
Ga0114980_1000023922	3300009152	Freshwater Lake	MHAILRFRLPDEQAEFDAAMQGRDAKSAIWAVDQHCRSILKHGEPSEETRRHLEGIREMLRERPGLLDD*
Ga0114980_103271273	3300009152	Freshwater Lake	MHAILRFRLPEEQTEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
Ga0114963_100037076	3300009154	Freshwater Lake	MPHVSLRFRLPDEQVEFTAALQGADAKSAIWQVDQYCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD*
Ga0114963_1000958210	3300009154	Freshwater Lake	MPHVILRYRLPDEQSDFDAAMQGRDAKIVIWEVDQYCRGLVKHGTISDETAKHLDRIREMLRERPELLND*
Ga0114963_1001150512	3300009154	Freshwater Lake	MPHVILRYRLPDEQPELTAAMQGADAKAAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
Ga0114963_1001286110	3300009154	Freshwater Lake	MPHVILRFRLPAEQTELNAAMQGREAKYVLYSVDQYCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD*
Ga0114963_100206287	3300009154	Freshwater Lake	MPHVIIRFRLPDEQTELNAAMQGREAKGAIWSVDQYCRSILKHGEPTAEVRKHLEWIRDMLRDKPGLLDD*
Ga0114963_1002117910	3300009154	Freshwater Lake	MHVILRFRLPDEQPEFNAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
Ga0114963_100248919	3300009154	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIAIWEIDQYCRGLLKHGTISDETAKHLEHIREMLRERPELLND*
Ga0114963_100312182	3300009154	Freshwater Lake	MPMRRPVGIASRAAFHFPFSRIKKMPNVIIRFRLPSEQTEYTAAMQGREAKYVLYSVDQYCRGILKHGEPSEETRRHLEEIREMLRERPGLLDD*
Ga0114963_100496512	3300009154	Freshwater Lake	MPHVIIRFRLPSEQTEFTAAMQGREAKYVLYSVDQYCRSILKHGEPSEETRRHLEEIREILRERPELLDD*
Ga0114963_100579073	3300009154	Freshwater Lake	MHAILRFRLPEEQTEFNAAMQGRDAKAAIWLVDQHCRSILRHGEPSEETRRHLEEIREMLRERPGLLDD*
Ga0114963_100700277	3300009154	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEIDQYCRGLLKHGTISDETAKHFERIREMLRERPELLND*
Ga0114963_101473202	3300009154	Freshwater Lake	MHAILRFRLPDEQTEFNSAMQGREAKGVIWSVDQYCRNILKHGEPSYEVRKHLEWIRDMLRDKPGLLDD*
Ga0114963_101891753	3300009154	Freshwater Lake	MPHVIIRFKLPDEQVEFNAAMQGREAKGVIWSVDQYCRNILKHGEPSYEVRKHLEWIRDMLRERTGLLDD*
Ga0114963_102234373	3300009154	Freshwater Lake	MPHVILRFRLPDEQTEFNAAMQGADAKAAIWQVDQYCRSVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
Ga0114963_102816442	3300009154	Freshwater Lake	MPHVILRFRLPDEQTELTAAMQGADAKSVIWQVDQYCRGVLKHGEPSAETRRHLEEIRKTLRERPGLLDD*
Ga0114963_104191372	3300009154	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETARHLEHIREMLRERPELLND*
Ga0114968_1000679410	3300009155	Freshwater Lake	MSHVILRYRLPDEQVELNAAMQGREAKGVIWSVDQYCRNILKHGEPSDEVRKHLEWIRDMLRDKPGLLDD*
Ga0114978_107767151	3300009159	Freshwater Lake	NAAMPHVIIRFRLPDEQPELTAAMQGREAKATLWEVDQYCRGILKHGEPSGETRDLAERIREMLRERPGLLDD*
Ga0114975_103326712	3300009164	Freshwater Lake	MPHVIIRYRLPDEQVELNAAMQGREAKATLWEVDQYCRTILKHGEPSEDERRHLERIRDILRERPGLLDD*
Ga0114979_1000112234	3300009180	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGVLKHGTISDETAKHFERIREMLGERPELLND*
Ga0114959_100255202	3300009182	Freshwater Lake	MHVILRFRLPDEQTELNAAMQGREAKGVIWSVDQYCRNILKHGEPSDEVRKHLEWVRDMLRERPGLLDD*
Ga0114976_105245241	3300009184	Freshwater Lake	MPHVILRFRLPEEQPEFDAAMQGRDAKAVIWAVDQHCRSILKHGEPSEETRKQIEQIREMLRESPGLLDD*
Ga0114958_1000626118	3300009684	Freshwater Lake	MHVILRYRLPDEQAEFNAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIREMLRERPGLLDD*
Ga0114958_101635851	3300009684	Freshwater Lake	RATEMPHVIIRFRLPEDQGDFDAAMQGRDAKIAIWEIDQYCRGLLKHGTISDETAKHLEHIREMLRERPELLND*
Ga0114964_100980352	3300010157	Freshwater Lake	MPHVIIRFRLPDEQVELNAAMQGGDAKSAIWQIDQYCRAVLKHGEPPVETRQHLEEIREILRERPGLLDD*
Ga0136644_100258909	3300010334	Freshwater Lake	MHAILRFRLPEEQTEFNAAMQGADAKAAIWQVDQYCRGVLKHGEPSEDERRQLERIRDILRERPGLLD
Ga0136644_100362272	3300010334	Freshwater Lake	MPHVILRYRLPEEQVELNAAMQGREAKGVIWSVDQYCRNILKHGEPSAEARRHLEEIRDMLRDKPGLLDE*
Ga0136644_100363893	3300010334	Freshwater Lake	MPHVIIRFRLPDEQVEFNAAMQGSDAKSAIWQVDQYCHGVLKHGEPSVETRQHLDEIREILRERPGLLDD*
Ga0136644_101846051	3300010334	Freshwater Lake	CRGRATEMPHVIIRFRLPEDQGDFDAAMQGRDAKIAIWEIDQYCRGLLKHGTISDETAKHLEHIREMLRERPELLND*
Ga0136644_106398361	3300010334	Freshwater Lake	MPHVILRFRLPDEQTELTAAMQGADAKAAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD*
Ga0133913_104703771	3300010885	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLVKHGTISDETAKHLEHIREMLRERPEL
Ga0133913_119058291	3300010885	Freshwater Lake	MHAILRFRLPEEQTEFNAAMQGADAKAAIWQVDQYCRGVLKHGEPSEDERRQLERIRD
Ga0133913_119157034	3300010885	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKSVIWEIDQYCRGLLKHGTISDETAKHFERIREMLRERPGLLDD*
Ga0133913_133620854	3300010885	Freshwater Lake	MDFDPVREVQEVMPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETAKHFERIREMLRERPGLLDD*
Ga0164293_100262258	3300013004	Freshwater	MPHVIIRFRLPDEQTELNAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEGIREMLRDRPGLLDD*
Ga0164292_100571951	3300013005	Freshwater	MPHAILRFRLPEEQTEFNAAIQGREAKGVLWAVDQHCRSILKHGEPSEETRQQLEQIREMLRER
Ga0136641_100123410	3300013286	Freshwater	MPHVIIRFRLPDEQIEFNAAMQGREAKGVIWEVDQYCRSILKHGEPSAETRQHLEQIRELLRERPGLLDD*
Ga0136641_100390911	3300013286	Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKSVIWEVDQYCRGVLKHGEPSEEAATYLERIRNLLRDRPGLLDE*
Ga0136641_10129259	3300013286	Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKSVIWEVDQYCRGILKHGDPSEEPARHLEYIREILRERPGLLDD*
Ga0136641_11652712	3300013286	Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRSILKHSEPSEETRRHLEEIREMLRERPELLND*
Ga0136641_11719742	3300013286	Freshwater	VMPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETRQHLEHIREILRERPELLND*
Ga0136641_11802032	3300013286	Freshwater	MHVIIRFRLPDEQPELNAAMQGRAAKTAIWNVDQYCRGIVKHGEPSAETRRHLDEIREMLREHPGLLDD*
Ga0136641_11873091	3300013286	Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGILKHGDPSEEPARHLEHIREILRERPGLLDD*
Ga0194049_12237912	3300020157	Anoxic Zone Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETARYFERIREMLRERPELLND
Ga0194042_10476562	3300020229	Anoxic Zone Freshwater	VSPNPPGGVLCSRITNMPHVIIRFRLPEDQSDFDAAMQGRDAKIVIWGVDQYCRGLLKHGTISDETAHHFERIREMLRERPGLLDD
Ga0194058_102785922	3300021071	Anoxic Zone Freshwater	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETAHHFERIREMLRERPGLLED
Ga0194057_1000298316	3300021072	Anoxic Zone Freshwater	MPHVIIRFRLPEDQSDFDAAMQGRDAKIVIWGVDQYCRGLLKHGTISDETAHHFERIREMLRERPGLLED
Ga0194044_100317757	3300021074	Anoxic Zone Freshwater	PHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETAHHFERIREMLRERPGLLED
Ga0213920_10044754	3300021438	Freshwater	MPHVIIRFRLPDEQDELNAAMQGREAKGVIWSVDQYCRNILKHGEPSSEVMKHLEWIREMLRETPGLLD
Ga0214919_103914901	3300023184	Freshwater	MPHVILRFRLPEEQPEFDAAMQGRDAKAAIWAVDQHCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD
Ga0214919_105848623	3300023184	Freshwater	HVIIRFRLPDEQTEFNSAMQGAEAKGVIWSVDQYCRNILKHGEPSDEVRKHLQWIRDMLRDRPGLLND
Ga0208864_11426311	3300025578	Freshwater	MPHVIIRFRLPDEQVEFNAAMQGREAKGMIWSVDQYCRNILKHGEPSGDVRKHLEWIRDMLRERPELLDD
Ga0209188_10390485	3300027708	Freshwater Lake	MHVILRFRLPDEQTELNAAMQGREAKGVIWSVDQYCRNILKHGEPSDEVRKHLEWVRDMLRERPGLLDD
Ga0209499_100018430	3300027712	Freshwater Lake	MPHVILRYRLPDEQSDFDAAMQGRDAKIVIWEVDQYCRGLVKHGTISDETAKHLDRIREMLRERPELLND
Ga0209087_10054426	3300027734	Freshwater Lake	MHVILRFRLPDEQPELNAAMQGRDAKGAIWSVDQYCRGVLKHGEPSAETRRHLEEIREMLRERPGLLDD
Ga0209085_100045232	3300027741	Freshwater Lake	MPHVSLRFRLPDEQVEFTAALQGADAKSAIWQVDQYCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD
Ga0209085_10035487	3300027741	Freshwater Lake	MPHVIIRFRLPDEQVELNAAMQGGDAKSAIWQIDQYCRAVLKHGEPPVETRQHLEEIREILRERPGLLDD
Ga0209085_100450910	3300027741	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEIDQYCRGLLKHGTISDETAKHFERIREMLRERPELLND
Ga0209085_10053176	3300027741	Freshwater Lake	MHVILRFRLPDEQPEFNAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0209085_10086643	3300027741	Freshwater Lake	MPHVILRFRLPAEQTELNAAMQGREAKYVLYSVDQYCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD
Ga0209085_10092193	3300027741	Freshwater Lake	MHAILRFRLPEEQTEFNAAMQGRDAKAAIWLVDQHCRSILRHGEPSEETRRHLEEIREMLRERPGLLDD
Ga0209085_10257844	3300027741	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETARHLEHIREMLRERPELLND
Ga0209085_10335303	3300027741	Freshwater Lake	MPHVIIRFRLPDEQTELNAAMQGREAKGAIWSVDQYCRSILKHGEPTAEVRKHLEWIRDMLRDKPGLLDD
Ga0209085_10351768	3300027741	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLVKHGTISDETAKHLEHIREM
Ga0209085_10479352	3300027741	Freshwater Lake	MPHVILRFRLPDEQTELTAAMQGADAKSVIWQVDQYCRGVLKHGEPSAETRRHLEEIRKTLRERPGLLDD
Ga0209085_10631413	3300027741	Freshwater Lake	MHVILRFRLPDEQSEFDAARQGSEAKAVLWDVDQYCRGILKHGEPSAETREHIEHIRTLIHEKPGLLDD
Ga0209085_10714804	3300027741	Freshwater Lake	MPHVIIRFKLPDEQVEFNAAMQGREAKGVIWSVDQYCRNILKHGEPSYEVRKHLEWIRDMLRERTGLLDD
Ga0209085_11117034	3300027741	Freshwater Lake	RPCHNAAMPHVILRYRLPDEQPELTAAMQGADAKAAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0209085_11129012	3300027741	Freshwater Lake	MHAILRFRLPDEQTEFNSAMQGREAKGVIWSVDQYCRNILKHGEPSYEVRKHLEWIRDMLRDKPGLLDD
Ga0209085_11140293	3300027741	Freshwater Lake	MPHVILRFRLPDEQTEFNAAMQGADAKAAIWQVDQYCRSVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0209085_11275252	3300027741	Freshwater Lake	MPHVIIRFRLPSEQTEFTAAMQGREAKYVLYSVDQYCRSILKHGEPSEETRRHLEEIREILRERPELLDD
Ga0209085_12813201	3300027741	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIAIWEIDQYCRGLLKHGTISDETAKHLEHIREMLRERPELLND
Ga0209189_100078021	3300027747	Freshwater Lake	MPHAILRFRLPEEQTEFSAALQGADAKAAIWQVDQYCRGVLKHGEPSEDDRRHLERIRDILRERPGLLDD
Ga0209189_11719882	3300027747	Freshwater Lake	MPHVIIRFRLPDEQVEFNAAMQGSDAKSAIWQVDQYCHGVLKHGEPSVETRQHLDEIREI
Ga0209189_11875701	3300027747	Freshwater Lake	MPHVILRYRLPEEQVELNAAMQGREAKGVIWSVDQYCRNILKHGEPSAEARRHLEEIRDMLRDKPGLLDE
Ga0209189_13519891	3300027747	Freshwater Lake	MPHVILRFRLPDEQTELTAAMQGADAKAAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0209084_12322211	3300027749	Freshwater Lake	DPVREVQEVMPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETAKHFERIREMLRERPGLLDD
Ga0209088_1000307312	3300027763	Freshwater Lake	MPHVIIRFRLPEDQGDFDAAMQGRDAKIVIWEVDQYCRGVLKHGTISDETAKHFERIREMLGERPELLND
Ga0209829_101536951	3300027777	Freshwater Lake	IRFRLPEDQGDFDAAMQGRDAKIAIWEIDQYCRGLLKHGTISDETAKHLEHIREMLRERPELLND
Ga0209500_104465571	3300027782	Freshwater Lake	RFRLPDEQPELTAAMQGREAKATLWEVDQYCRGILKHGEPSGETRDLAERIREMLRERPGLLDD
Ga0209400_100110541	3300027963	Freshwater Lake	MSHVILRYRLPDEQVELNAAMQGREAKGVIWSVDQYCRNILKHGEPSDEVRKHLEWIRDMLRDKPGLLDD
Ga0209401_100067524	3300027971	Freshwater Lake	MPHVIIRFRLPEEQPEFDAAMQGRDAKAVIWAVDQHCRSILKHGEPSEETRQQIEQIREMLRESPGLLDD
Ga0209298_1000016438	3300027973	Freshwater Lake	MHAILRFRLPDEQAEFDAAMQGRDAKSAIWAVDQHCRSILKHGEPSEETRRHLEGIREMLRERPGLLDD
Ga0209298_102431582	3300027973	Freshwater Lake	MHAILRFRLPEEQTEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0334994_0099338_1157_1417	3300033993	Freshwater	VSPNPPGGVLCSRIKNMPHVILRFRLPEEQAEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0334994_0275124_363_575	3300033993	Freshwater	MPHAILRFRLPDEQSEFDAARQGSEAKGAIWSVDQYCRNILKHGEPSDEVRKHLEWIRDMLRERPGLLDD
Ga0334996_0406158_346_558	3300033994	Freshwater	MPHVIIRFRLPDEQTELNAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEGIREMLRDRPGLLDD
Ga0334996_0504247_183_395	3300033994	Freshwater	MPHAILRFRLPEEQTEFNAAIQGREAKGVLWAVDQHCRSILKHGEPSEETRRQLEQIRDLLRERPGLLDD
Ga0334985_0010850_682_894	3300034018	Freshwater	MPHVIIRFRLPEDQVDFDAAMQGRDAKIVIWEVDQYCRGLLKHGTISDETARHFERIREMLRERPELLND
Ga0334985_0161365_1205_1414	3300034018	Freshwater	MHAILRFRLPDEQAEFNAAMQGREAKGVIWSVDQYCRNILKHGEPSEETAKHLEHIRDLLRERPGLLDE
Ga0334985_0201161_316_528	3300034018	Freshwater	MPHVILRFRLPDEQTELTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0334987_0058607_1613_1822	3300034061	Freshwater	MHAILRFRLPEEQTEFTAAMQGREAKGVLWAVDQHCRSILKHGEPSEETRQQLEQIRELLRERPGLLDD
Ga0334995_0078565_1457_1669	3300034062	Freshwater	MPHVILRFRLPEEQAEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLDD
Ga0335010_0349974_544_756	3300034092	Freshwater	MPHVILRFRLPDEQTELTAALQGADAKSVIWQVDQYCRGVLKHGEPTPETRHHLEHIREILRDSPGLLDD
Ga0335029_0132422_574_786	3300034102	Freshwater	MPHVILRFRLPDEQTEFTAAMQGADAKSVLWQVDQYCRGVLKHGEPSAETRRHLEGIREMLRDRPGLLDD
Ga0335031_0426566_418_630	3300034104	Freshwater	MPHAILRFRLPEEQTEFNAAIQGREAKGVLWAVDQHCRSILKHGEPSEETRQQLEQIREMLRERPGLLDD
Ga0335036_0008725_5074_5286	3300034106	Freshwater	MPHAILRFRLPDEQSEFDAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRDMLRERPGLLDD
Ga0335036_0176329_672_881	3300034106	Freshwater	MHAILRFRLPEEQTEFNAAMQGREAKAAIWAVDQHCRNILKHGEPSEETRQQLEQIRDLLRERPGLLDD
Ga0335053_0006642_6824_7033	3300034118	Freshwater	MHAILRFRLPEEQTEFNAAMQGREAKGVLWAVDQHCRSILKHGEPSEETRQQLEQIREMLRERPGLLDD
Ga0335052_0182348_3_188	3300034279	Freshwater	LPEEQAEFTAAMQGADAKSAIWQVDQYCRGVLKHGEPSAETRRHLEEIRETLRERPGLLD
Ga0335013_0043612_2366_2578	3300034284	Freshwater	MPHVTIRFRLPDEQHEFTAAMQGREAKGVLWAVDQHCRSILKHGEPSEETRQQLEQIREMLRERPGLLDD
Ga0335013_0254481_175_411	3300034284	Freshwater	LAWLEQGQVSHVILRFRLPDEQHELTAAMQGREAKGVIWAVDQHCRSILKHGEPSEETRRHLEEIREMLRERPGLLDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082075

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences