Metagenome / Metatranscriptome Family F082159

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082159
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	41 residues
Representative Sequence	MVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	84.96 %
% of genes from short scaffolds (< 2000 bps)	79.65 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (69.027 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (18.584 % of family members)
Environment Ontology (ENVO)	Unclassified (65.487 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.637 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.79% β-sheet: 0.00% Coil/Unstructured: 58.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01583	APS_kinase	6.19
PF01165	Ribosomal_S21	5.31
PF06414	Zeta_toxin	2.65
PF13661	2OG-FeII_Oxy_4	2.65
PF13640	2OG-FeII_Oxy_3	1.77
PF11450	DUF3008	0.88
PF13884	Peptidase_S74	0.88
PF09834	DUF2061	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	6.19
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	5.31

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.04 %
Unclassified	root	N/A	7.96 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	84.96 %
Unclassified	root	N/A	7.96 %
cellular organisms	root	All Organisms → cellular organisms	7.08 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.54 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.54 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	3.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.88 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
unclassified Spirochaetia	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
Spirochaetia bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia → Spirochaetia bacterium	0.88 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.88 %
Spirochaetia bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia → Spirochaetia bacterium	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
unclassified Chroococcales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → unclassified Chroococcales	0.88 %
Spirochaetia bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia → Spirochaetia bacterium	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	69.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.93 %
Unclassified	root	N/A	7.96 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.54 %
Chroococcales cyanobacterium metabat2.561	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → unclassified Chroococcales → Chroococcales cyanobacterium metabat2.561	0.88 %
Spirochaetia bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia → Spirochaetia bacterium	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035265000\|ErSWdraf_F5BXKTZ02GE6KL	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300002274\|B570J29581_100843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2127	Open in IMG/M
3300002835\|B570J40625_100577808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035	Open in IMG/M
3300003430\|JGI25921J50272_10120197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	552	Open in IMG/M
3300004054\|Ga0063232_10048569	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300005582\|Ga0049080_10175157	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	714	Open in IMG/M
3300005805\|Ga0079957_1010619	Not Available	6948	Open in IMG/M
3300005805\|Ga0079957_1028535	All Organisms → Viruses → Predicted Viral	3735	Open in IMG/M
3300007559\|Ga0102828_1004369	All Organisms → Viruses → Predicted Viral	2703	Open in IMG/M
3300007560\|Ga0102913_1211085	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	622	Open in IMG/M
3300007562\|Ga0102915_1085950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1033	Open in IMG/M
3300007590\|Ga0102917_1207495	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	683	Open in IMG/M
3300007597\|Ga0102919_1177904	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	667	Open in IMG/M
3300007606\|Ga0102923_1086761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	984	Open in IMG/M
3300007606\|Ga0102923_1188393	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642	Open in IMG/M
3300007617\|Ga0102897_1154939	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300007620\|Ga0102871_1068861	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1029	Open in IMG/M
3300007625\|Ga0102870_1053396	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1198	Open in IMG/M
3300007627\|Ga0102869_1129155	Not Available	685	Open in IMG/M
3300007630\|Ga0102903_1128278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	697	Open in IMG/M
3300007634\|Ga0102901_1124758	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300007649\|Ga0102912_1088690	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	892	Open in IMG/M
3300008107\|Ga0114340_1011646	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4346	Open in IMG/M
3300008107\|Ga0114340_1029557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → unclassified Chroococcales → Chroococcales cyanobacterium metabat2.561	3474	Open in IMG/M
3300008108\|Ga0114341_10042700	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3002	Open in IMG/M
3300008108\|Ga0114341_10072266	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2168	Open in IMG/M
3300008110\|Ga0114343_1078898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1188	Open in IMG/M
3300008117\|Ga0114351_1126818	All Organisms → Viruses → Predicted Viral	2215	Open in IMG/M
3300008119\|Ga0114354_1142763	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	900	Open in IMG/M
3300008120\|Ga0114355_1065581	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1567	Open in IMG/M
3300008261\|Ga0114336_1104565	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → unclassified Spirochaetia → Spirochaetia bacterium	1325	Open in IMG/M
3300008961\|Ga0102887_1261367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300009049\|Ga0102911_1246501	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300009059\|Ga0102830_1249016	Not Available	519	Open in IMG/M
3300009068\|Ga0114973_10064080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2140	Open in IMG/M
3300009080\|Ga0102815_10254364	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	969	Open in IMG/M
3300009159\|Ga0114978_10253288	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1093	Open in IMG/M
3300009419\|Ga0114982_1174264	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	665	Open in IMG/M
3300010157\|Ga0114964_10219896	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	909	Open in IMG/M
3300010158\|Ga0114960_10519047	Not Available	570	Open in IMG/M
3300010160\|Ga0114967_10197936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1082	Open in IMG/M
3300013005\|Ga0164292_10934050	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300013372\|Ga0177922_11212857	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	597	Open in IMG/M
3300017722\|Ga0181347_1156376	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	620	Open in IMG/M
3300017766\|Ga0181343_1145674	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300017778\|Ga0181349_1212266	Not Available	664	Open in IMG/M
3300017778\|Ga0181349_1247044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	597	Open in IMG/M
3300017784\|Ga0181348_1031724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2219	Open in IMG/M
3300017784\|Ga0181348_1273679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	575	Open in IMG/M
3300020141\|Ga0211732_1008456	All Organisms → Viruses → Predicted Viral	1353	Open in IMG/M
3300020141\|Ga0211732_1035642	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	905	Open in IMG/M
3300020151\|Ga0211736_10228034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1068	Open in IMG/M
3300020151\|Ga0211736_10289219	All Organisms → Viruses → Predicted Viral	4748	Open in IMG/M
3300020159\|Ga0211734_10601595	Not Available	1819	Open in IMG/M
3300020160\|Ga0211733_10009031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	832	Open in IMG/M
3300020160\|Ga0211733_10158952	All Organisms → Viruses → Predicted Viral	3677	Open in IMG/M
3300020160\|Ga0211733_10231031	All Organisms → Viruses → Predicted Viral	3432	Open in IMG/M
3300020161\|Ga0211726_10180664	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300020161\|Ga0211726_10226032	All Organisms → Viruses → Predicted Viral	3701	Open in IMG/M
3300020161\|Ga0211726_10629029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	678	Open in IMG/M
3300020162\|Ga0211735_10148168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	615	Open in IMG/M
3300020162\|Ga0211735_10755453	All Organisms → Viruses → Predicted Viral	1334	Open in IMG/M
3300020172\|Ga0211729_10379913	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	786	Open in IMG/M
3300020172\|Ga0211729_11373717	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	591	Open in IMG/M
3300020205\|Ga0211731_11474428	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	589	Open in IMG/M
3300020205\|Ga0211731_11515973	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300020220\|Ga0194119_10046080	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4064	Open in IMG/M
3300020531\|Ga0208487_1010227	All Organisms → Viruses → Predicted Viral	1241	Open in IMG/M
3300020532\|Ga0208601_1049397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587	Open in IMG/M
3300020539\|Ga0207941_1035955	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	671	Open in IMG/M
3300020563\|Ga0208082_1057239	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	660	Open in IMG/M
3300020578\|Ga0194129_10111304	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1841	Open in IMG/M
3300020603\|Ga0194126_10574389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679	Open in IMG/M
3300021091\|Ga0194133_10132101	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1825	Open in IMG/M
3300021963\|Ga0222712_10128277	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1739	Open in IMG/M
3300021963\|Ga0222712_10628004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	616	Open in IMG/M
3300023311\|Ga0256681_10712414	Not Available	504	Open in IMG/M
3300026459\|Ga0255170_1024685	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1137	Open in IMG/M
3300026569\|Ga0255277_1090522	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
3300027193\|Ga0208800_1002623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2221	Open in IMG/M
3300027211\|Ga0208307_1060835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558	Open in IMG/M
3300027291\|Ga0255139_1037449	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	929	Open in IMG/M
3300027608\|Ga0208974_1113388	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	714	Open in IMG/M
3300027710\|Ga0209599_10030293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1473	Open in IMG/M
3300027734\|Ga0209087_1196159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	777	Open in IMG/M
3300027753\|Ga0208305_10185567	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	752	Open in IMG/M
3300027782\|Ga0209500_10245813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300027963\|Ga0209400_1088588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1471	Open in IMG/M
3300028025\|Ga0247723_1039442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1417	Open in IMG/M
3300031784\|Ga0315899_11439799	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	581	Open in IMG/M
3300031787\|Ga0315900_10317803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1278	Open in IMG/M
3300032116\|Ga0315903_10667339	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	784	Open in IMG/M
3300033816\|Ga0334980_0393124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300033994\|Ga0334996_0163445	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1225	Open in IMG/M
3300033996\|Ga0334979_0109629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1709	Open in IMG/M
3300034093\|Ga0335012_0197277	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300034093\|Ga0335012_0339733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	750	Open in IMG/M
3300034093\|Ga0335012_0395166	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	677	Open in IMG/M
3300034093\|Ga0335012_0505914	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	572	Open in IMG/M
3300034103\|Ga0335030_0313784	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300034103\|Ga0335030_0355670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	964	Open in IMG/M
3300034105\|Ga0335035_0028544	All Organisms → Viruses → Predicted Viral	3715	Open in IMG/M
3300034106\|Ga0335036_0010995	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7414	Open in IMG/M
3300034108\|Ga0335050_0183587	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300034111\|Ga0335063_0042321	All Organisms → Viruses → Predicted Viral	2896	Open in IMG/M
3300034116\|Ga0335068_0395032	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	663	Open in IMG/M
3300034167\|Ga0335017_0579030	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584	Open in IMG/M
3300034279\|Ga0335052_0088383	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
3300034279\|Ga0335052_0195317	All Organisms → Viruses → Predicted Viral	1168	Open in IMG/M
3300034283\|Ga0335007_0241586	Not Available	1223	Open in IMG/M
3300034355\|Ga0335039_0052976	All Organisms → cellular organisms → Bacteria → FCB group	2441	Open in IMG/M
3300034355\|Ga0335039_0525997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.35%
Terrestrial	Environmental → Terrestrial	2.65%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	76.99%
Marine	Environmental → Aquatic → Marine	20.35%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	56.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	18.58%
Lentic	Environmental → Aquatic → Freshwater → Lentic	15.04%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.65%
River	Environmental → Aquatic → Freshwater → River	2.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	56.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	18.58%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.73%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	18.58%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	18.58%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.81%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.08%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.65%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.77%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.77%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035265000	Freshwater microbial communities from Swedish Lakes - surface of Lake Erken	Environmental	Open in IMG/M
3300002274	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020531	Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020532	Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300026459	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8d	Environmental	Open in IMG/M
3300026569	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027291	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8d	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ErSWdraft_6455830	2035265000	Freshwater	MVLELTREVAALGVKVEFLTKENDKLEKSIPKNKKQLNG
B570J29581_1008435	3300002274	Freshwater	DDLRNMVLELTREVAALGVKVEFLTKENDKLEKSIPKAKKQILNG*
B570J40625_1005778083	3300002835	Freshwater	MVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING*
JGI25921J50272_101201972	3300003430	Freshwater Lake	KDELRGMVLALTKEVAALSVKVEYLTKENDKLEKALPKTKRQING*
Ga0063232_100485693	3300004054	Freshwater Lake	MVLELTKEVAALGVKVEFLTKENDKLEKSLPKTRKQING*
Ga0049080_101751571	3300005582	Freshwater Lentic	LTKEVAALSVKVEFLTKENDKLEKSIPKRKKTLLND*
Ga0079957_10106195	3300005805	Lake	LRAMVLALTKEVAALSVKVEYLTKENDKLEKALPKTRKQING*
Ga0079957_10285351	3300005805	Lake	LRAMVLALTKEVAALSVKVEYLTKENDKLEKALPKAKRQING*
Ga0102828_10043695	3300007559	Estuarine	EKDELRNMVLGLTKEVAALSVKVEFLTRENDKLEKAIPKTKKQLNG*
Ga0102913_12110852	3300007560	Estuarine	EAAGREKDELRMMVLELTKEVAALGVKVEYLTKENDKLEKALPKTKRQING*
Ga0102915_10859501	3300007562	Estuarine	EKDDLRMMVLNLTKEVAALSVKVEFLTKENDKLEKAVPKTKIKKQLNG*
Ga0102917_12074952	3300007590	Estuarine	SKEKDELRSMVLALTKEVAALTVKVEYLTKENDKLEKALPKTKRQING*
Ga0102919_11779042	3300007597	Estuarine	EKDELRGMVLALTKEVAALTVKVEYLTKENDKLEKALPKTKRQING*
Ga0102923_10867611	3300007606	Estuarine	TREVAALSVKVEFLTRENDKLEKAIPKTKKQLNG*
Ga0102923_11883932	3300007606	Estuarine	QMILALTKEVAALSVKVEYLTKENEELHKKTKKQLNG*
Ga0102897_11549391	3300007617	Estuarine	LRNMVLGLTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0102871_10688611	3300007620	Estuarine	MILALTKEVAALSVKVEYLTKENEELHKKTKKQLNG*
Ga0102870_10533963	3300007625	Estuarine	REKDDLRNMVLALTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0102869_11291551	3300007627	Estuarine	LRGMVLELTREVAALGVKVEFLTRENDKLEKALPKTKKQILNG*
Ga0102903_11282781	3300007630	Estuarine	KEKDDLRNMVLELTREVAALGVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0102901_11247583	3300007634	Estuarine	LELTKEVAALGVKVEFLTKENDKLEKAIPKTKRQING*
Ga0102912_10886902	3300007649	Estuarine	RNMVLGLTKEVAALSVKVEFLTKENDKLEKAVPKTKKQLNG*
Ga0114340_10116461	3300008107	Freshwater, Plankton	KEKDELRNMVLSLTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0114340_10295573	3300008107	Freshwater, Plankton	MIIEMTAKVAELTVKVEYLTKENDKLEKALPKTKRQING*
Ga0114341_100427004	3300008108	Freshwater, Plankton	MVLNLTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0114341_100722661	3300008108	Freshwater, Plankton	TKEVAALSVKVEYLTKENDKLEKALPKAKRQING*
Ga0114343_10788981	3300008110	Freshwater, Plankton	KDEMRKMIIEMTAKVAELTVKVEYLTKENDKLEKALPKTKRQING*
Ga0114351_11268184	3300008117	Freshwater, Plankton	MVLDMTAKVAELTVKVEYLTRENDKLEKALPKTRKQVNG*
Ga0114354_11427631	3300008119	Freshwater, Plankton	EVAALSVKVEFLTKENDKLEKALPKTRKKQQLNG*
Ga0114355_10655811	3300008120	Freshwater, Plankton	SKEKDDLRNMVLALTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG*
Ga0114336_11045651	3300008261	Freshwater, Plankton	SKEKDELRMMVLNLTKEVAALSVKVEFLTKENDKLEKALPKAKRQING*
Ga0102887_12613671	3300008961	Estuarine	RQMILALTKEVAALSVKVEYLTKENEELHKKTKKQLNG*
Ga0102911_12465012	3300009049	Estuarine	LTKEVAALTVKVEYLTKENDKLEKALPKTKRQING*
Ga0102830_12490161	3300009059	Estuarine	RNMVLELTREVAALSVKVEFLTRENDKLEKALPKTKKQTLNG*
Ga0114973_100640801	3300009068	Freshwater Lake	MVLELTKEVAALGVKVEFLTRENDKLEKALPKTKRQING*
Ga0102815_102543641	3300009080	Estuarine	ELTKEVAALSVKVEFLTRENDKLEKALPKTKKQLNG*
Ga0114978_102441751	3300009159	Freshwater Lake	KGDLRNMVLALTKEVAALSVKVEFLTKENEELNKKSKSKKTLLNG*
Ga0114978_102532881	3300009159	Freshwater Lake	TKEVAALGVKVEFLTKENDKLEKALPKTKRQING*
Ga0114982_11742641	3300009419	Deep Subsurface	EKDELRNMVLALTKEVAALGVKVEFLTKENDKLEKALPKTKRQING*
Ga0114964_102198961	3300010157	Freshwater Lake	AAGKEKDDLRKMILDLTKQVAALGVKVEFLTKENEKLANLKPSAKKILKG*
Ga0114960_105190472	3300010158	Freshwater Lake	DLTKHVAELSVKVEFLTKENEKLAKTSTKPTKKQLNG*
Ga0114967_101979363	3300010160	Freshwater Lake	ELTKEVAALGVKVEFLTKENDKLEKAIPKTKRQING*
Ga0164292_109340502	3300013005	Freshwater	SKEKDELRSMVLALTKEVAALSVKVEYLTKENDKLEKALPKAKRQING*
Ga0177922_112128571	3300013372	Freshwater	LRNMVLELTREVAALSVKVEFLTKENDKLEKALPKTKKQILNG*
Ga0181347_11563761	3300017722	Freshwater Lake	KDELRNMVLELTREVAALSVKVEFLTRENDKLEKAIPKTKKQILNG
Ga0181343_11456741	3300017766	Freshwater Lake	VLALTKEVAALSVKVEFLTKENEELNKKTKARKQTLNG
Ga0181349_12122661	3300017778	Freshwater Lake	LELTREVAALSVKVEFLTRENDKLEKALPKTKKQTLNG
Ga0181349_12470442	3300017778	Freshwater Lake	SKEKDELRSMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0181348_10317241	3300017784	Freshwater Lake	DELRNMVLELTREVAALSVKVEFLTRENDKLEKALPKTKKQTLNG
Ga0181348_12736792	3300017784	Freshwater Lake	ELTREVAALSVKVEFLTKENDKLEKALPKTKKQILNG
Ga0211732_10084561	3300020141	Freshwater	DELRMMVLELTKEVAALGVKVEFLTKENDKLEKALPKTRKQING
Ga0211732_10356421	3300020141	Freshwater	DELRMMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0211736_102280341	3300020151	Freshwater	LELTREVAALGVKVEFLTKENDKLEKSIPKNKKQLNG
Ga0211736_102892191	3300020151	Freshwater	ELRSMVLGLTKEVAALSVKVEFLTKENDKLEKAIPKTRKQING
Ga0211734_106015955	3300020159	Freshwater	RSMVLALTKEVAALSVKVEYLTKENDKLEKALPKAKRQING
Ga0211733_100090311	3300020160	Freshwater	LRNMVLALTKEVAELGVKVEYLTKENDKLEKALPKAKRQIING
Ga0211733_101589521	3300020160	Freshwater	LRMMVLELTKEVAALGVKVEFLTKENDKLEQALPKTKKQING
Ga0211733_102310316	3300020160	Freshwater	NMVLALTKEVAALGVKVEYLTKENDKLEKALPKTRKQING
Ga0211726_101806642	3300020161	Freshwater	KDELRMMVLELTKEVAALGVKVEFLTKENDKLEKALPKTRKQING
Ga0211726_102260321	3300020161	Freshwater	KDELRMMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKKQING
Ga0211726_106290292	3300020161	Freshwater	LRNMVLELTREVAALGVKVEFLTKENDKLEKALPKTKKQLNG
Ga0211735_101481681	3300020162	Freshwater	REKDELRMMVLELTKEVAALGVKVEYLTKENDKLEKALPKTRKQING
Ga0211735_107554533	3300020162	Freshwater	RMMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0211729_103799132	3300020172	Freshwater	KEKDELRSMVLELTREVAALGVKVEFLTKENDKLEKSIPKTRKQING
Ga0211729_113737172	3300020172	Freshwater	LELTREVAALGVKVEFLTKENDKLEKALPKTKKQLNG
Ga0211731_114744281	3300020205	Freshwater	LELTREVAALGVKVEFLTKENDKLEKAIPKSKKQING
Ga0211731_115159731	3300020205	Freshwater	ESSKEKDELRSMVLALTKEVAALSVKVEYLTKENDKLEKALPKTRKQING
Ga0194119_100460801	3300020220	Freshwater Lake	LTKEVAALSVKVEFLTKENEELHKKASKTKRIING
Ga0208487_10102271	3300020531	Freshwater	LTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0208601_10493972	3300020532	Freshwater	RSMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0207941_10359552	3300020539	Freshwater	KEKDDLRNMVLELTREVAALGVKVEFLTKENDKLEKSIPKAKKQILNG
Ga0208082_10572392	3300020563	Freshwater	LRNMVLALTKEVAALSVKVEFLTKENDKLEKALPKTKRQING
Ga0194129_101113041	3300020578	Freshwater Lake	SREKNELRTMVLNLTKEVAALSVKVEFLTKENEELHKKASKTKRIING
Ga0194126_105743891	3300020603	Freshwater Lake	ELRTMVLNLTKEVAALSVKVEFLTKENEELHKKASKTKRIING
Ga0194133_101321011	3300021091	Freshwater Lake	NLTKEVAALSVKVEFLTKENEELHKKASKTKRIING
Ga0222712_101282771	3300021963	Estuarine Water	REKDELRTMILSLTKEVAALTVKVEYLTKENDKLEKALPKAKKTLLNG
Ga0222712_106280042	3300021963	Estuarine Water	DELRSMVLALTKEVAALSVKVEYLTKENDKLEKALPKAKRQING
Ga0256681_107124142	3300023311	Freshwater	VQAGKEKDDLRGMILDLTKQVAALSVKVEFLTKENEKLKSNKAENNKKQLNG
Ga0255170_10246853	3300026459	Freshwater	MTAKVAELTVKVEYLTRENDKLEKALPKAKRQLNG
Ga0255277_10905221	3300026569	Freshwater	MTAKVAELTVKVEYLTRENDKLEKSLPKAKRQLNG
Ga0208800_10026231	3300027193	Estuarine	GLLEAAGSEKNDLRMMILDLTKQVAALSVKVEFLTKENDKLVKATPKTTKKQLNG
Ga0208307_10608352	3300027211	Estuarine	RSMVLALTKEVAALSVKVEYLTKENDKLEKALPKAKRQQING
Ga0255139_10374491	3300027291	Freshwater	LRTMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0208974_11133881	3300027608	Freshwater Lentic	LTKEVAALSVKVEFLTKENDKLEKSIPKRKKTLLND
Ga0209599_100302931	3300027710	Deep Subsurface	RNMVLSLTKEVAALSVKVEFLTKENEKLEKTTKPKKQQLNG
Ga0209087_11961592	3300027734	Freshwater Lake	ELRSMVLELTKEVAALGVKVEFLTKENDKLEKAIPKTKRQING
Ga0208305_101855671	3300027753	Estuarine	LTKEVAALSVKVEFLTRENDKLEKALPKTKKQLNG
Ga0209500_102458131	3300027782	Freshwater Lake	ELRTMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0209400_10885883	3300027963	Freshwater Lake	RNMVLELTKEVAALGVKVEFLTKENDKLEKALPKTKKQING
Ga0247723_10394423	3300028025	Deep Subsurface Sediment	MVLALTKEVAALSVKVEFLTKENDKLEKALPKIRKKQQING
Ga0315899_114397992	3300031784	Freshwater	RNMVLALTKEVAALSVKVEFLTKENEELNKKTKVRKQTLNG
Ga0315900_103178034	3300031787	Freshwater	DEMRKMIIEMTAKVAELTVKVEYLTKENDKLEKALPKAKRQING
Ga0315903_106673393	3300032116	Freshwater	ALTKEVAALSVKVEFLTKENDKLEKALPKTRKKQQLNG
Ga0334980_0393124_2_121	3300033816	Freshwater	MVLALTKEVAALSVKVEYLTKENDKLEKALPKTKRQING
Ga0334996_0163445_1088_1207	3300033994	Freshwater	MVLELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0334979_0109629_1570_1692	3300033996	Freshwater	MVLELTREVAALGVKVEFLTKENDKLEKSIPKAKKQILNG
Ga0335012_0197277_7_129	3300034093	Freshwater	MMVLELTKEVAALGVKVEYLTKENDKLEKALPRTKRQING
Ga0335012_0339733_600_722	3300034093	Freshwater	MMVLNLTKEVAALSVKVEFLTKENDKLEKALPKTKKQLNG
Ga0335012_0395166_1_111	3300034093	Freshwater	ELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0335012_0505914_404_562	3300034093	Freshwater	LEASAREKDDLRGMVLALTKEVAALSVKVEYLTKENDKLEKALPRTKRQING
Ga0335030_0313784_928_1044	3300034103	Freshwater	LALTKEVAALSVKVEFLTKENDKLEKALPKTKKQQLNG
Ga0335030_0355670_27_146	3300034103	Freshwater	MVLALTKEVAALSVKVEYLTKENDKLEKALPKTRKQING
Ga0335035_0028544_2_115	3300034105	Freshwater	LELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0335036_0010995_7283_7402	3300034106	Freshwater	MVLELTREVAALSVKVEFLTKENDKLEKSLPKTKRQING
Ga0335050_0183587_994_1101	3300034108	Freshwater	LTKEVAALGVKVEFLTKENDKLEKALPKTRKQING
Ga0335063_0042321_30_149	3300034111	Freshwater	MVFELTKEVAALGVKVEFLTKENDKLEKALPKTKRQING
Ga0335068_0395032_22_144	3300034116	Freshwater	MVLALTKEVAALSVKVEFLTKENDKLEKALPKTKKQTLNG
Ga0335017_0579030_477_584	3300034167	Freshwater	TKEVAALSVKVEFLTKENDKLEKSIPKRKKTLLND
Ga0335052_0088383_13_132	3300034279	Freshwater	MVLELTREVAALSVKVEFLTKENDKLEKSLPKTRKQING
Ga0335052_0195317_1052_1168	3300034279	Freshwater	VLELTKEVAALGVKVEFLTKENDKLEKALPKTRKQING
Ga0335007_0241586_1080_1202	3300034283	Freshwater	MVLALTKEVAALSVKVEFLTKENDKLEKALPKTKKQQING
Ga0335039_0052976_3_110	3300034355	Freshwater	TKQVAALTVKVEFLTKENEKLVKATPKTTKKQLNG
Ga0335039_0525997_424_543	3300034355	Freshwater	MVLALTKEVAALSVKVEFLTKENDKLEKALPKTKRQING

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082159

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences