Metagenome Family F082168

Basic Information
Family ID	F082168
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	98 residues
Representative Sequence	MATSNFHNVNASAIFAVPLENEYDYEDLVDNLKSELKDNSDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDY
Number of Associated Samples	99
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	23.01 %
% of genes from short scaffolds (< 2000 bps)	22.12 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (87.611 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (24.779 % of family members)
Environment Ontology (ENVO)	Unclassified (63.717 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.788 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.14% β-sheet: 23.23% Coil/Unstructured: 62.63%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04820	Trp_halogenase	3.54
PF02675	AdoMet_dc	1.77
PF04434	SWIM	0.88
PF13578	Methyltransf_24	0.88
PF02130	YbeY	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	1.77
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	0.88
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.88
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.88
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
All Organisms	root	All Organisms	12.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
Viruses	superkingdom	All Organisms → Viruses	7.08 %
cellular organisms	root	All Organisms → cellular organisms	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.42 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	3.54 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	3.54 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	3.54 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003413\|JGI25922J50271_10025787	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1437	Open in IMG/M
3300004692\|Ga0065171_1012679	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300005581\|Ga0049081_10012193	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300007544\|Ga0102861_1063732	Not Available	965	Open in IMG/M
3300007549\|Ga0102879_1105650	Not Available	874	Open in IMG/M
3300007560\|Ga0102913_1083419	Not Available	1039	Open in IMG/M
3300007597\|Ga0102919_1132157	Not Available	785	Open in IMG/M
3300007603\|Ga0102921_1214197	Not Available	691	Open in IMG/M
3300007618\|Ga0102896_1057129	All Organisms → Viruses → Predicted Viral	1296	Open in IMG/M
3300007627\|Ga0102869_1084897	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	870	Open in IMG/M
3300008052\|Ga0102893_1109152	Not Available	819	Open in IMG/M
3300008113\|Ga0114346_1093605	Not Available	1392	Open in IMG/M
3300008950\|Ga0102891_1150062	Not Available	690	Open in IMG/M
3300009151\|Ga0114962_10013729	All Organisms → cellular organisms → Archaea	5882	Open in IMG/M
3300009159\|Ga0114978_10362538	Not Available	875	Open in IMG/M
3300012663\|Ga0157203_1008021	All Organisms → Viruses → Predicted Viral	1843	Open in IMG/M
3300012665\|Ga0157210_1006112	All Organisms → Viruses → Predicted Viral	2369	Open in IMG/M
3300017774\|Ga0181358_1200910	Not Available	652	Open in IMG/M
3300020498\|Ga0208050_1006133	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300020537\|Ga0208722_1011022	All Organisms → Viruses → Predicted Viral	1600	Open in IMG/M
3300020572\|Ga0207909_1040884	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	749	Open in IMG/M
3300024346\|Ga0244775_11059563	Not Available	637	Open in IMG/M
3300027732\|Ga0209442_1041462	All Organisms → Viruses → Predicted Viral	2024	Open in IMG/M
3300027753\|Ga0208305_10153579	Not Available	843	Open in IMG/M
3300027763\|Ga0209088_10081529	All Organisms → Viruses → Predicted Viral	1514	Open in IMG/M
3300027804\|Ga0209358_10279189	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	829	Open in IMG/M
3300031951\|Ga0315904_10228951	Not Available	1798	Open in IMG/M
3300033993\|Ga0334994_0446688	Not Available	613	Open in IMG/M
3300034021\|Ga0335004_0337051	Not Available	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	74.34%
Marine	Environmental → Aquatic → Marine	25.66%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	38.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.32%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	23.01%
River	Environmental → Aquatic → Freshwater → River	2.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.65%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.94%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	23.01%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	18.58%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	8.85%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	24.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	23.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.16%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.65%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.77%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.89%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020524	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020534	Freshwater microbial communities from Lake Mendota, WI - 12JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020537	Freshwater microbial communities from Lake Mendota, WI - 21SEP2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020556	Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020564	Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027144	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0h	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027529	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8h	Environmental	Open in IMG/M
3300027593	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_102039111	3300001282	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDFGKTDPNELRSFPSRTLGSIRKYHQYKDFYIEVCVTPVIR
B570J29032_1087697981	3300002408	Freshwater	MATSNFHNENASAIFAVRLEDEWAYDDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQY
JGI25910J50241_100933163	3300003388	Freshwater Lake	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCVTPVIRSGYYEGVNLD
JGI25907J50239_10487241	3300003394	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVE
JGI25920J50251_100433874	3300003404	Freshwater Lake	MSTSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVC
JGI25911J50253_101165621	3300003411	Freshwater Lake	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCVTSVIRSGYYEGVNLDWNVDYLXNGDVSYDSPD
JGI25922J50271_100257871	3300003413	Freshwater Lake	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDVSYDSPDFYINDIAYC
JGI25922J50271_101352541	3300003413	Freshwater Lake	MATSNFHNVNATHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDVSYDSPDFYINDIAYC
Ga0066179_102123391	3300004126	Freshwater Lake	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCV
Ga0065171_10126791	3300004692	Freshwater	MATSNFHNENASAIFAVRLENEYDYEDLVDNLKSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYSINGDAQYDNNDFYIEDIAWYGKLSKSAATKYAK
Ga0070374_101654401	3300005517	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIEDIAHYGNLSKSAATKYA
Ga0049081_100121931	3300005581	Freshwater Lentic	MSTSNFHNVNASAIFAVPLENEYDYEDLVDNLKSELKDNSDYVDYGKTDKNELRSFPSRTLGS
Ga0102861_10637324	3300007544	Estuarine	MATSNFHNENASAIFAVPLENEFDYEDLVCNLESELSNNPDYVDYGKTDKHELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNV
Ga0102875_12693592	3300007547	Estuarine	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIDDIAH
Ga0102879_11056501	3300007549	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDVSYDSPDFYIDDI
Ga0102879_11071561	3300007549	Estuarine	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSEFSNDSDYVDYGKTDHNELRSF
Ga0102828_11092773	3300007559	Estuarine	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIEDIAHYGNLSK
Ga0102828_11718541	3300007559	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGN
Ga0102913_10834191	3300007560	Estuarine	MSTSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYL
Ga0102917_12916681	3300007590	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELNNDSDYVDYGKTDPNELRSFPSRALGSIRKYAQYKDFYVEVCVTPVIRSGYYSGVNL
Ga0102919_11321573	3300007597	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDKHELRSFPSRTLGSIRKYAQYKDFYVEVCVTPVIRSGYYSGVNLDLNVDYLINGDASYDSPSFYIDDIAHYGNLPKSAATKYAKL
Ga0102921_12141973	3300007603	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYH*
Ga0102923_12069162	3300007606	Estuarine	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELGNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSG
Ga0102923_12071703	3300007606	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASY
Ga0102896_10571294	3300007618	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYID
Ga0102869_10848973	3300007627	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDASYDSPDFY
Ga0102865_11279533	3300007639	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPYRTLGSIRRYHQYKDFYIEVCVTPVIRSGYYSG
Ga0102865_12252982	3300007639	Estuarine	MATSNFHNENASAIFAVELEHEFDYDDLVDNLKSELNNDPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSG
Ga0102910_11647623	3300007667	Estuarine	MSTSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIR
Ga0102859_12624152	3300007708	Estuarine	MATSNFHNVNASAIFAVQLEDEWSYDDLVENLKSQLNNDPNYVDYGKSDPNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDVSYDSPDFYIDDIAYCGNLSKSAATKY
Ga0102893_11091523	3300008052	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSAATKYAKLA
Ga0114341_101319352	3300008108	Freshwater, Plankton	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDNNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGCNLDWNVDYLLNGVTAQFSNGETIYHKIA*
Ga0114341_103397133	3300008108	Freshwater, Plankton	MATSNFHNVNASAIFAVQLENDFDYEDLVDNLKSELNNDSDYVDYGKADHNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDVSYDSPDFYIDDIAYCGNLSKSVATKYAK
Ga0114346_10936054	3300008113	Freshwater, Plankton	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNELRSFPSTTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLPKSKAIV
Ga0114337_101173220	3300008262	Freshwater, Plankton	MATSNFHNVNASAIFAVRLENEYDYEDLVCNLESELSNNPDYVDYGKTDKHELRSFPSRTLGV*
Ga0102891_11500621	3300008950	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELNNDSDYVDYGKADHNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYY
Ga0102831_12762842	3300008996	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDKHELRSFPSRALGSIRKYAQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSAATKYAKLAE
Ga0102830_11609773	3300009059	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYL
Ga0102814_102536841	3300009079	Estuarine	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRRYHQYKDFYVEVCV
Ga0102815_104839831	3300009080	Estuarine	MATSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYDGVNLDWNVDYSINGDSYDIDELENGIGYNTA
Ga0114962_100137291	3300009151	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSAATKYAKLAEKKAEK
Ga0114962_106297121	3300009151	Freshwater Lake	MATSNFHNENASAIFAVQLEHEFDYDDLVDNLKSELNNDPDYVDYGKADKNELRSFPSRTLGSIRKYVQYKDFYVEVCVTPVIRSGYYDGVNLDWNVDYLINGDAQYDNTDFYIDDIAHYGSMSKSKATKYAKL
Ga0114980_100898445	3300009152	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIEDIAHYGNLSKSAATKYAKLAEKK
Ga0114978_103625383	3300009159	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSAATKYALLAE*
Ga0114970_103058531	3300009163	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSA
Ga0105102_105859682	3300009165	Freshwater Sediment	MATSNFHNENASAIFAVRLEDEWAYEDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGECSYDEPNFEVAD
Ga0114979_104902483	3300009180	Freshwater Lake	MATSNFHNVNASAIFAVPLEHEFDYEDLICNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGV
Ga0157203_10080211	3300012663	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVCNLESELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYXXXXS*
Ga0157210_10061126	3300012665	Freshwater	MATSNFHNVNASAIFAVQLENDFDYEDLVDNLKSELNNDSDYVDYGKTDHNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDVSYDSPDFYIDDIAYCGNL
Ga0164292_100163869	3300013005	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDYGKTDHNELRSFPSRTLGSIRKYHQ
Ga0181358_12009102	3300017774	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIEDIAHYGNF
Ga0211726_105545951	3300020161	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELNNDSDYVDYGKTDPNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPV
Ga0194037_12656841	3300020164	Anoxic Zone Freshwater	MATSNFHNENASAIFAVQLEHEFDYDDLVDNLKSELNNDPDYVDYGKADKNELRSFPSRTLGSIRKYVQYKDFYVEVCVTPVIRSGYYDGVNLDWNVDYLINGDAQYDNTDFY
Ga0211729_108850231	3300020172	Freshwater	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKY
Ga0208050_10061331	3300020498	Freshwater	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVE
Ga0208858_10564872	3300020524	Freshwater	MATSNFHNVNASAIFAVRLEDEWAYDDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRSLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGV
Ga0208596_10236101	3300020534	Freshwater	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIR
Ga0208722_10110221	3300020537	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYTINGDIYDI
Ga0207941_10128655	3300020539	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVCNLESELGNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVE
Ga0208486_10672231	3300020556	Freshwater	MATSNFHNVNASAIFAVPLEHEFDYEDLVDNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIEDIAHYGNLSKSAATKYAKLAEKKAE
Ga0208597_10223991	3300020562	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDFGKTDPNELRSFPSRTLGSIRKYHQ
Ga0208719_10355673	3300020564	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELNNDSDYVDYGKTDPNELRSFPSRTLGSIRKYHQYKDFYIEVCVTPVIRSGYYSGCNLDWNVDYLINGDVSYDSPDFYIDD
Ga0207909_10408843	3300020572	Freshwater	MATSNFHNVNASAIFAVRLEDEWAYDDLVENLTSELNNDADYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVD
Ga0214163_10301075	3300021141	Freshwater	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSG
Ga0222712_105911102	3300021963	Estuarine Water	MATSNFHNENASAIFAVRLENEYDYEDLVCNLESELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFY
Ga0181351_11140411	3300022407	Freshwater Lake	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCVTSVIRSGYYEGVNLDWNVDYLING
Ga0244775_109704841	3300024346	Estuarine	MATSNFHNENASAIFAVELEHEFDYDDLVDNLKSELNNDPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGANLDW
Ga0244775_110595633	3300024346	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIR
Ga0255102_10547202	3300027144	Freshwater	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCVTSVIR
Ga0208800_10425661	3300027193	Estuarine	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSP
Ga0255077_10986192	3300027529	Freshwater	MATSNFHNENASAIFAVELEHEFDYDDLVDNLKSELNNDPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGANLDWNVDYLINGDASYDSPAFYIDDIAWYGKLPKSKASVYA
Ga0255118_10868482	3300027593	Freshwater	MSTSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYD
Ga0208951_10557501	3300027621	Freshwater Lentic	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRY
Ga0209357_11284331	3300027656	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVT
Ga0209442_10414621	3300027732	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVE
Ga0209297_13559322	3300027733	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSA
Ga0208305_101535793	3300027753	Estuarine	MATSNFHNVNASAIFAVPLEHEFDYEDLVCNLESELSNNPDYVDYGKTDKNELRSFPSRTLG
Ga0209088_100815295	3300027763	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLG
Ga0209107_104330881	3300027797	Freshwater And Sediment	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYH
Ga0209358_102791891	3300027804	Freshwater Lake	MATSNFHNENASAIFAVRLENEYDYEDLVCNLESELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYAQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDVSYDSPDFYIDDIAYCGNLSKSVATKYA
Ga0209990_103378471	3300027816	Freshwater Lake	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDNNELRSFPSRTLGSI
Ga0209550_101298151	3300027892	Freshwater Lake	MSTSNFHNVNASAIFAVLLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYL
Ga0209550_102881033	3300027892	Freshwater Lake	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELKDDPDYVDYGKTDHNELRSFPSRSLGSLRRYIQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYL
Ga0209191_10552966	3300027969	Freshwater Lake	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGC
Ga0315908_115986301	3300031786	Freshwater	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNELRSFPSTTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVD
Ga0315904_102289516	3300031951	Freshwater	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDNNELRSFPSRTLGSIRK
Ga0334980_0245415_418_705	3300033816	Freshwater	MATSNFHNVNATHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWN
Ga0334994_0446688_3_218	3300033993	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDFGKTDPNELRSFPSRTLGSIRKYHQYKD
Ga0334991_0353265_3_239	3300034013	Freshwater	MATSNFHNVNASHIFACSLEDEWAYDDLVDNLKSELGNDSDYVDYGKTDHNECRSFPSRTLGSIRKYHQYKDFYVEVCV
Ga0335004_0337051_486_875	3300034021	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIDDIAHYGNLSKSAATK
Ga0335021_0639792_1_324	3300034023	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYD
Ga0335019_0676636_3_281	3300034066	Freshwater	MATSNFHNVNASAIFAVQLENDFDYEDLVDNLKSELNNDSDYVDYGKADHNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNL
Ga0335019_0843332_2_307	3300034066	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDQNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLIN
Ga0335028_0708532_334_525	3300034071	Freshwater	MATSNFHNVNASHIFACSLENEWDYEDLVDNLKSELSNDSDYVDYGKTDHNECRSFPSRTLGSI
Ga0335012_0503439_1_294	3300034093	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVCNLESELGNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVD
Ga0335022_0122975_3_227	3300034095	Freshwater	MATSNFHNENASAIFAVQLEHEFDYDDLVENLKSELNNDPDYVDYGKTDKNELRSFPSRTLGSIRKYVEYKDFYV
Ga0335029_0460654_516_749	3300034102	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVCNLESELGNNPDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVC
Ga0335030_0658591_369_632	3300034103	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDFGKTDPNELRSFPSRTLGSIRKYHQYKDFYIEVCVTPVIRSGYY
Ga0335036_0702711_348_596	3300034106	Freshwater	MATSNFHNVNASAIFAVRLEDEWAYDDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVI
Ga0335068_0007047_2_208	3300034116	Freshwater	MSTSNFHNVNASAIFAVPIENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQ
Ga0335068_0548196_3_320	3300034116	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVDNLKSELKDNSDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDAS
Ga0335033_0261554_2_256	3300034117	Freshwater	MATSNFHNVNASAIFAVRLEDEWAYDDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRS
Ga0335033_0464802_1_261	3300034117	Freshwater	MATSNFHNVNASAIFAVQLENEFDYDDLVDNLKSELNNDSDYVDYGKTDNNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGY
Ga0335054_0519774_3_380	3300034119	Freshwater	MATSNFHNVNASAIFAVRLEDEWAYDDLVENLTSELSNNPDYVDYGKTDKHELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYEGVNLDWNVDYLINGDASYDSPSFYIDDIAHYGNLPKS
Ga0335054_0771570_205_510	3300034119	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLIN
Ga0335058_0333012_3_248	3300034121	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPV
Ga0335017_0665400_242_532	3300034167	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDDSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDRNV
Ga0335065_0660706_304_600	3300034200	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVDNLKSELKDNSDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDY
Ga0335052_0457800_2_412	3300034279	Freshwater	MSTSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDPNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGCNLDWNVDYLINGDVSYDSPDFYIDDIAYCGNLSKSAATKYAKLAEK
Ga0335007_0292339_3_236	3300034283	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELSNDSDYVDFGKTDPNELRSFPSRTLGSIRKYHQYKDFYIEVC
Ga0335007_0516270_1_207	3300034283	Freshwater	MATSNFHNVNATHIFACSLENEWDYEDLVDNLKSELNNDPDYVDYGKTDYNELRSFPSRSLGSLRRYIQ
Ga0335013_0612381_396_632	3300034284	Freshwater	MATSNFHNVNASAIFAVPLENEYDYEDLVDNLKSELKDNSDYVDYGKTDKNELRSFPSRTLGSIRKYHQYKDFYVEVCV
Ga0335048_0355617_381_740	3300034356	Freshwater	MATSNFHNVNASAIFAVPLENDFDYEDLVDNLKSELKDNSDYVDYGKTDHNELRSFPSRTLGSIRRYHQYKDFYVEVCVTPVIRSGYYSGVNLDWNVDYLINGDASYDSPDFYIDDIAHY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign