Metagenome Family F082270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082270
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	92 residues
Representative Sequence	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Number of Associated Samples	91
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	28.32 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.451 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (33.628 % of family members)
Environment Ontology (ENVO)	Unclassified (71.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (69.912 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.96% β-sheet: 0.00% Coil/Unstructured: 51.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00154	RecA	35.40
PF05221	AdoHcyase	6.19
PF00730	HhH-GPD	3.54
PF02274	ADI	0.88
PF12102	MrcB_N	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	35.40
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	6.19
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.54
COG0177	Endonuclease III	Replication, recombination and repair [L]	3.54
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.54
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	3.54
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	3.54
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.88
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.88
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.05 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.88 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.88 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.55 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.88 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10057536	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300002447\|JGI24768J34885_10185419	Not Available	704	Open in IMG/M
3300003411\|JGI25911J50253_10191222	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300004772\|Ga0007791_10143327	Not Available	702	Open in IMG/M
3300005582\|Ga0049080_10035265	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300006030\|Ga0075470_10026390	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300006863\|Ga0075459_1080237	Not Available	557	Open in IMG/M
3300006875\|Ga0075473_10050903	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300006875\|Ga0075473_10117320	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300007547\|Ga0102875_1187015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300007548\|Ga0102877_1074021	Not Available	976	Open in IMG/M
3300007622\|Ga0102863_1027363	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300007630\|Ga0102903_1170250	Not Available	595	Open in IMG/M
3300007670\|Ga0102862_1153621	Not Available	589	Open in IMG/M
3300007973\|Ga0105746_1138223	Not Available	817	Open in IMG/M
3300007974\|Ga0105747_1037899	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300008055\|Ga0108970_10068111	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300008119\|Ga0114354_1102694	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300009068\|Ga0114973_10270389	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009068\|Ga0114973_10337640	Not Available	797	Open in IMG/M
3300009151\|Ga0114962_10456621	All Organisms → cellular organisms → Bacteria → Terrabacteria group	682	Open in IMG/M
3300009152\|Ga0114980_10200251	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300009154\|Ga0114963_10152433	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300009158\|Ga0114977_10354395	Not Available	826	Open in IMG/M
3300009158\|Ga0114977_10466147	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300009158\|Ga0114977_10467554	All Organisms → cellular organisms → Bacteria → Terrabacteria group	694	Open in IMG/M
3300009159\|Ga0114978_10441032	Not Available	773	Open in IMG/M
3300009160\|Ga0114981_10192974	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300009161\|Ga0114966_10673898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	569	Open in IMG/M
3300009164\|Ga0114975_10054927	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300009180\|Ga0114979_10167698	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300009180\|Ga0114979_10419146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300009181\|Ga0114969_10321185	Not Available	907	Open in IMG/M
3300009181\|Ga0114969_10613066	Not Available	595	Open in IMG/M
3300009182\|Ga0114959_10090912	Not Available	1687	Open in IMG/M
3300009185\|Ga0114971_10438243	Not Available	737	Open in IMG/M
3300010158\|Ga0114960_10600374	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300010160\|Ga0114967_10128776	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1431	Open in IMG/M
3300010160\|Ga0114967_10579487	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300010334\|Ga0136644_10221195	Not Available	1122	Open in IMG/M
3300010334\|Ga0136644_10334716	All Organisms → cellular organisms → Bacteria → Terrabacteria group	870	Open in IMG/M
3300010885\|Ga0133913_11874053	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300013004\|Ga0164293_10224818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1341	Open in IMG/M
3300013006\|Ga0164294_10067425	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2721	Open in IMG/M
3300013006\|Ga0164294_10117057	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300013006\|Ga0164294_11122382	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300013014\|Ga0164295_10146251	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300013014\|Ga0164295_11222015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	583	Open in IMG/M
3300013286\|Ga0136641_1154620	Not Available	619	Open in IMG/M
3300013295\|Ga0170791_13179687	Not Available	2736	Open in IMG/M
3300018790\|Ga0187842_1230217	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300020540\|Ga0208227_1004811	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300020562\|Ga0208597_1017242	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1722	Open in IMG/M
3300022752\|Ga0214917_10025572	All Organisms → cellular organisms → Bacteria	4633	Open in IMG/M
3300022752\|Ga0214917_10055723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	2624	Open in IMG/M
3300022752\|Ga0214917_10071582	Not Available	2176	Open in IMG/M
3300022752\|Ga0214917_10085596	Not Available	1904	Open in IMG/M
3300023174\|Ga0214921_10208797	Not Available	1208	Open in IMG/M
3300024348\|Ga0244776_10604963	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300024509\|Ga0255175_1081686	Not Available	577	Open in IMG/M
3300025848\|Ga0208005_1030061	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1675	Open in IMG/M
3300025872\|Ga0208783_10039995	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300027143\|Ga0255105_1002333	All Organisms → cellular organisms → Bacteria	4640	Open in IMG/M
3300027143\|Ga0255105_1030617	All Organisms → cellular organisms → Bacteria → Terrabacteria group	965	Open in IMG/M
3300027146\|Ga0255104_1080939	All Organisms → cellular organisms → Bacteria → Terrabacteria group	526	Open in IMG/M
3300027147\|Ga0255113_1018772	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300027149\|Ga0255108_1039063	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300027150\|Ga0255112_1076673	All Organisms → cellular organisms → Bacteria → Terrabacteria group	635	Open in IMG/M
3300027493\|Ga0255103_1087694	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300027534\|Ga0255125_1082934	Not Available	658	Open in IMG/M
3300027596\|Ga0255119_1037708	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300027642\|Ga0209135_1031700	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300027656\|Ga0209357_1129405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	688	Open in IMG/M
3300027689\|Ga0209551_1097896	All Organisms → cellular organisms → Bacteria → Terrabacteria group	948	Open in IMG/M
3300027712\|Ga0209499_1021952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2945	Open in IMG/M
3300027733\|Ga0209297_1116349	Not Available	1131	Open in IMG/M
3300027734\|Ga0209087_1022994	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
3300027734\|Ga0209087_1340833	Not Available	521	Open in IMG/M
3300027741\|Ga0209085_1257371	All Organisms → cellular organisms → Bacteria → Terrabacteria group	682	Open in IMG/M
3300027741\|Ga0209085_1273319	Not Available	653	Open in IMG/M
3300027744\|Ga0209355_1271154	All Organisms → cellular organisms → Bacteria → Terrabacteria group	657	Open in IMG/M
3300027747\|Ga0209189_1054715	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300027760\|Ga0209598_10161280	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300027763\|Ga0209088_10270356	Not Available	699	Open in IMG/M
3300027777\|Ga0209829_10004808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9345	Open in IMG/M
3300027777\|Ga0209829_10059777	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300027785\|Ga0209246_10368071	Not Available	544	Open in IMG/M
3300027797\|Ga0209107_10072047	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1904	Open in IMG/M
3300027797\|Ga0209107_10194263	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300027808\|Ga0209354_10340421	All Organisms → cellular organisms → Bacteria → Terrabacteria group	592	Open in IMG/M
3300027892\|Ga0209550_10075801	All Organisms → cellular organisms → Bacteria	2598	Open in IMG/M
3300027963\|Ga0209400_1394107	Not Available	500	Open in IMG/M
3300027969\|Ga0209191_1001951	All Organisms → cellular organisms → Bacteria	13211	Open in IMG/M
3300027971\|Ga0209401_1089119	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300032092\|Ga0315905_10447894	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300033981\|Ga0334982_0102822	Not Available	1504	Open in IMG/M
3300033984\|Ga0334989_0112682	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300033993\|Ga0334994_0480115	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300033996\|Ga0334979_0607745	All Organisms → cellular organisms → Bacteria → Terrabacteria group	580	Open in IMG/M
3300034021\|Ga0335004_0347664	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300034023\|Ga0335021_0194736	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1132	Open in IMG/M
3300034023\|Ga0335021_0624651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300034050\|Ga0335023_0380582	Not Available	749	Open in IMG/M
3300034051\|Ga0335024_0037754	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300034060\|Ga0334983_0371816	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300034068\|Ga0334990_0178791	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1159	Open in IMG/M
3300034082\|Ga0335020_0468898	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300034095\|Ga0335022_0117519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1679	Open in IMG/M
3300034104\|Ga0335031_0697101	All Organisms → cellular organisms → Bacteria → Terrabacteria group	584	Open in IMG/M
3300034111\|Ga0335063_0282756	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300034121\|Ga0335058_0276181	All Organisms → cellular organisms → Bacteria → Terrabacteria group	977	Open in IMG/M
3300034200\|Ga0335065_0019909	All Organisms → cellular organisms → Bacteria	4744	Open in IMG/M
3300034200\|Ga0335065_0349938	All Organisms → cellular organisms → Bacteria → Terrabacteria group	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.11%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.73%
Marine	Environmental → Aquatic → Marine	12.39%
Leaf	Host-Associated → Plants → Leaf	0.89%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	62.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.16%
River	Environmental → Aquatic → Freshwater → River	8.85%
Coastal	Environmental → Aquatic → Marine → Coastal	7.08%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	62.83%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	10.62%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	8.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.08%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.31%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	33.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	25.66%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	8.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.08%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.31%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.77%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.77%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.77%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.89%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300020540	Freshwater microbial communities from Lake Mendota, WI - 13JUN2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024509	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8d	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027143	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8h	Environmental	Open in IMG/M
3300027146	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027149	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8h	Environmental	Open in IMG/M
3300027150	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8h	Environmental	Open in IMG/M
3300027493	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0h	Environmental	Open in IMG/M
3300027534	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8d	Environmental	Open in IMG/M
3300027596	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_100575362	3300002447	Freshwater And Sediment	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP*
JGI24768J34885_101854192	3300002447	Freshwater And Sediment	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP*
JGI25911J50253_101912222	3300003411	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP*
Ga0007791_101433271	3300004772	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVDLDHATAPEAQPTSTPSARMGVAAAVTILTLITALALLVRR*
Ga0049080_100352653	3300005582	Freshwater Lentic	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLARS*
Ga0075470_100263901	3300006030	Aqueous	VLTRGGRFHAYFPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAVTPESQPASARSPRMGVAAALTILAVITALALLARS*
Ga0075459_10802372	3300006863	Aqueous	LTIALQNRAVNTYTPLRLPLEEELISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLARS*
Ga0075473_100509033	3300006875	Aqueous	VNTYTPLRLPLEEELISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAVTPESQPASARSPRMGVAAALTILAVITALALLARS*
Ga0075473_101173201	3300006875	Aqueous	NTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILAVITALALLARP*
Ga0102875_11870152	3300007547	Estuarine	LTITLQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLVRL*
Ga0102877_10740212	3300007548	Estuarine	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITALALLVRR*
Ga0102863_10273633	3300007622	Estuarine	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITALALLARP*
Ga0102903_11702502	3300007630	Estuarine	LTITLQNRAVNTYTPLRLPLEEEPISPRPNPERSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITAL
Ga0102862_11536212	3300007670	Estuarine	LTITLQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITALALLVRG*
Ga0105746_11382232	3300007973	Estuary Water	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLVRR*
Ga0105747_10378991	3300007974	Estuary Water	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITALALLVRL*
Ga0108970_100681111	3300008055	Estuary	TPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARP*
Ga0114354_11026942	3300008119	Freshwater, Plankton	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP*
Ga0114973_102703891	3300009068	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVAAEMGAHAWAIEQETDATAPESQPASTRSPRMGVAAALTILAVITALALLARS*
Ga0114973_103376402	3300009068	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHAATPESQPTSTRSPRMGLAAALTILAVITALALLARS*
Ga0114962_104566212	3300009151	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILAVITALALLARP*
Ga0114980_102002512	3300009152	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEVEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP*
Ga0114963_101524332	3300009154	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRSPRMGLAAALTILAVITALALVAQS*
Ga0114977_103543951	3300009158	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHAATPESQPTSTRSPRMGLAAALTILAVITALALVAQS*
Ga0114977_104661471	3300009158	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWGETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARS*
Ga0114977_104675541	3300009158	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARS*
Ga0114978_104410321	3300009159	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEVSAHAWAVELDHAATPESQPTSTRSPRMGLASALTILAVITALALVAQS*
Ga0114981_101929741	3300009160	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILAVITALALLARS*
Ga0114966_106738982	3300009161	Freshwater Lake	LTIALQNRAVNTYTPLRQPRKEDPVSPRPNPEWSEAEIRRLLVEAEMSAHAWAVELDHAPTPESQPTSTRSPRMGVAAALTILVVITALALLARP*
Ga0114975_100549273	3300009164	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPEPQTVGTQSARMGVAAALAILVVITALALLARP*
Ga0114979_101676981	3300009180	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARS*
Ga0114979_104191462	3300009180	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITALALLARP*
Ga0114969_103211851	3300009181	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARL*
Ga0114969_106130661	3300009181	Freshwater Lake	NRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHAATPESQPTSTRSPRMGLAAALTILAVITALALLARS*
Ga0114959_100909123	3300009182	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRGPRMGLAAALTILAVITALALVAQS*
Ga0114971_104382432	3300009185	Freshwater Lake	QNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHAATPESQPTSTRSPRMGLAAALTILAVITALALLARS*
Ga0114960_106003741	3300010158	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILVVITALALLARP*
Ga0114967_101287763	3300010160	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSPRMGVAAAVTILVVITALALLARL*
Ga0114967_105794871	3300010160	Freshwater Lake	EEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVELDHAATPEPQTVGKQSARMGVAAALAILVVITALALLVRL*
Ga0136644_102211952	3300010334	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDTTTPESQPTSTRSPRMGLAAALTILAVITALALVAQS*
Ga0136644_103347162	3300010334	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEELISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILVVITALALLARP*
Ga0133913_118740531	3300010885	Freshwater Lake	YTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAATPESQPASARSPRMGVAAALTILVVITALALLARP*
Ga0164293_102248182	3300013004	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIEQETDATTPESQPTSTRSARMGVAAALAILVVITALALLARP*
Ga0164294_100674252	3300013006	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALAILVVITALALLVRL*
Ga0164294_101170571	3300013006	Freshwater	TPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLARS*
Ga0164294_111223822	3300013006	Freshwater	EEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVEHDHATTPEVQPTSTPSPRMGVAAALTILVVITALALFVRP*
Ga0164295_101462511	3300013014	Freshwater	LTITLQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVEHDHATTPEVQPTSTPSPRMGVAAALTILVVITALA
Ga0164295_112220151	3300013014	Freshwater	EEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEAATPKSQPASARSPRMGVAAALTILVVITALALLARL*
Ga0136641_11546202	3300013286	Freshwater	LTITLQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEVSAHAWAVELDQAATPEAQPTSTPSARMGVAAALTILVVITALALLVRG*
Ga0170791_131796871	3300013295	Freshwater	PISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRGPRMGLAAALTILAVITALALVAQS*
Ga0187842_12302172	3300018790	Freshwater	YRTYVLTRGGRFHAYFPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEAATTPESQPTSTRSPRMGVAAALTILAVITALALLARP
Ga0208227_10048113	3300020540	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0208597_10172422	3300020562	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARMGVAAALTILVVITALALLARP
Ga0214917_100255726	3300022752	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWDETEVRRLLVEAEMSAHAWAIELDHAATPESQPTSTRSPRMGVAAALTILAVITALALLAQS
Ga0214917_100557231	3300022752	Freshwater	MALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAATPESQPASTRSPRMGVAAALTILAVITAMALLAQS
Ga0214917_100715822	3300022752	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARMGVAAALTILVVITALALLAQT
Ga0214917_100855961	3300022752	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEVRRLLVEAEMGAHAWAIEQETDAATPESQPASTRSPRMGVAAALTILAVITALALLAQS
Ga0214921_102087973	3300023174	Freshwater	LTIALHNRAVNTYTPLRQPRKEDPVSPRPNPEWSEGEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRSPRMGVAAALTILAVITALAL
Ga0244776_106049631	3300024348	Estuarine	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARL
Ga0255175_10816863	3300024509	Freshwater	VNTYTPLRQPPKEEPISPRPNPEWSETEIRRLLAEAEMSAHAWAIELDTNAMPAPEPANAPRARIGVAAALTILVVITALALLIRS
Ga0208005_10300612	3300025848	Aqueous	LTIALQNRAVNTYTPLRLPLEEELISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAVTPESQPASARSPRMGVAAALTILAVITALALLARS
Ga0208783_100399952	3300025872	Aqueous	VNTYTPLRLPLEEELISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETEAVTPESQPASARSPRMGVAAALTILAVITALALLARS
Ga0255105_10023335	3300027143	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARL
Ga0255105_10306172	3300027143	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP
Ga0255104_10809391	3300027146	Freshwater	LTRGGRFHAYFPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0255113_10187722	3300027147	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0255108_10390631	3300027149	Freshwater	LQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITALALLARP
Ga0255112_10766732	3300027150	Freshwater	YTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP
Ga0255103_10876942	3300027493	Freshwater	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP
Ga0255125_10829341	3300027534	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITAL
Ga0255119_10377082	3300027596	Freshwater	RFHAYFPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0209135_10317002	3300027642	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEAATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0209357_11294052	3300027656	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0209551_10978962	3300027689	Freshwater Lake	LTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTQSPRMGVAAALTILVVITALALLARP
Ga0209499_10219524	3300027712	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRSPRMGLAAALTILAVITALALVAQS
Ga0209297_11163491	3300027733	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWGETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILA
Ga0209087_10229944	3300027734	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWGETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARS
Ga0209087_13408331	3300027734	Freshwater Lake	IALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHATTPESQPASTRSPRMGLAAALTILAVITALALVAQS
Ga0209085_12573712	3300027741	Freshwater Lake	TYTPLRLPLEEEPIPPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0209085_12733192	3300027741	Freshwater Lake	FPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRGPRMGLAAALTILAVITALALVAQS
Ga0209355_12711542	3300027744	Freshwater Lake	PLTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPASARSPRMGVAAALTILVVITALALLARP
Ga0209189_10547152	3300027747	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEELISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0209598_101612802	3300027760	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVAAEMGAHAWAIEQETDATAPESQPASTRSPRMGVAAALTILAVITALALLARS
Ga0209088_102703561	3300027763	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0209829_100048085	3300027777	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRGPRMGLAAALTILAVITALALVAQS
Ga0209829_100597772	3300027777	Freshwater Lake	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETEATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0209246_103680712	3300027785	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP
Ga0209107_100720472	3300027797	Freshwater And Sediment	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLARS
Ga0209107_101942631	3300027797	Freshwater And Sediment	FPLTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVETEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILAVITALALLVRG
Ga0209354_103404211	3300027808	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEAVTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0209550_100758011	3300027892	Freshwater Lake	YIPLTITLHNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHATTPEAQPTSTRSPRMGVAAAVTILVVITALALLARP
Ga0209400_13941072	3300027963	Freshwater Lake	AVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAVELDHAATPESQPTSTRSPRMGLAAALTILAVITALALLARS
Ga0209191_10019513	3300027969	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPEPQTVGTQSARMGVAAALAILVVITALALLARP
Ga0209401_10891192	3300027971	Freshwater Lake	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVAAEMGAHAWAIEQETDATAPESQPASTRSPRMGVAAALTILAVITALALLARS
Ga0315905_104478942	3300032092	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASARSPRMGVAAALTILAVITALALLARS
Ga0334982_0102822_1138_1425	3300033981	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVELDHAATPEPQTVGTQSARMGVAAALTILVVITALALLARP
Ga0334989_0112682_136_426	3300033984	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPTSTRSPRMGVAAALTILAVITALALLARP
Ga0334994_0480115_122_412	3300033993	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARS
Ga0334979_0607745_323_580	3300033996	Freshwater	TYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMSAHAWAIEQETDATTPESQPTSTRSARMGVAAALAILVVITALALLARP
Ga0335004_0347664_575_838	3300034021	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDATTPELQPASTRSPRMGVAAALTILAVITALALLARP
Ga0335021_0194736_701_982	3300034023	Freshwater	MALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARMGVAAALAILVVITALALLARP
Ga0335021_0624651_272_532	3300034023	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARVGVAAALTILVVITALALLARP
Ga0335023_0380582_54_341	3300034050	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPESQPTSTRSPRMGVAAALTILVVITALALLARP
Ga0335024_0037754_2436_2723	3300034051	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARVGVAAALTILVVITALALLARP
Ga0334983_0371816_564_827	3300034060	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDTTTPESQPASARSPRMGVAAALAILAVITALALLARP
Ga0334990_0178791_605_895	3300034068	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEPEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARMGVAAALAILVVITAALALLARP
Ga0335020_0468898_334_594	3300034082	Freshwater	VNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAVELDHAATPEPQTVGTQSARMGVAAALTILVVITALALLARP
Ga0335022_0117519_136_426	3300034095	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDTTTPESQPASARSPRMGVAAALAILAVITALALLARP
Ga0335031_0697101_129_419	3300034104	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETEATIPESQPASTRSPRMGVAAALTILAVITALALLARP
Ga0335063_0282756_98_382	3300034111	Freshwater	MALQNRAVNTYTPLRLPLEEEPISPRPNPEWSETEIRRLLVEAEMGAHAWAIEQETDTTTPESQPASARSPRMGVAAALTILAVITALALLARP
Ga0335058_0276181_545_832	3300034121	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIELDHATTPEPQTVGTQSARMGVAAALTILVVITALALLARP
Ga0335065_0019909_2006_2296	3300034200	Freshwater	LTIALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMSAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILAVITALALLARS
Ga0335065_0349938_233_517	3300034200	Freshwater	MALQNRAVNTYTPLRLPLEEEPISPRPNPEWSEAEIRRLLVEAEMGAHAWAIEQETDATTPESQPASTRSPRMGVAAALTILVVITALALLARP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences