Metagenome Family F082305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082305
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	48 residues
Representative Sequence	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQ
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.35 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.442 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.593 % of family members)
Environment Ontology (ENVO)	Unclassified (53.097 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.67% β-sheet: 0.00% Coil/Unstructured: 16.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04519	Bactofilin	18.58
PF02371	Transposase_20	5.31
PF01408	GFO_IDH_MocA	3.54
PF03401	TctC	2.65
PF12697	Abhydrolase_6	0.88
PF00496	SBP_bac_5	0.88
PF04392	ABC_sub_bind	0.88
PF03928	HbpS-like	0.88
PF01527	HTH_Tnp_1	0.88
PF00211	Guanylate_cyc	0.88
PF13738	Pyr_redox_3	0.88
PF00536	SAM_1	0.88
PF01844	HNH	0.88
PF05343	Peptidase_M42	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	18.58
COG3547	Transposase	Mobilome: prophages, transposons [X]	5.31
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.65
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	0.88
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	0.88
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.88
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	26.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.65 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.55 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10129892	Not Available	661	Open in IMG/M
3300004267\|Ga0066396_10093092	Not Available	548	Open in IMG/M
3300005332\|Ga0066388_101866315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300005332\|Ga0066388_102258544	Not Available	983	Open in IMG/M
3300005332\|Ga0066388_107761823	Not Available	537	Open in IMG/M
3300005435\|Ga0070714_100633397	Not Available	1028	Open in IMG/M
3300005467\|Ga0070706_100371449	Not Available	1332	Open in IMG/M
3300005471\|Ga0070698_102235790	Not Available	500	Open in IMG/M
3300005536\|Ga0070697_100218875	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300005558\|Ga0066698_10636900	Not Available	713	Open in IMG/M
3300005614\|Ga0068856_102039380	Not Available	584	Open in IMG/M
3300005713\|Ga0066905_100437643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300005713\|Ga0066905_102225501	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_107923960	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_108000772	Not Available	542	Open in IMG/M
3300006038\|Ga0075365_10560956	Not Available	808	Open in IMG/M
3300006050\|Ga0075028_100381908	Not Available	802	Open in IMG/M
3300006845\|Ga0075421_101704750	Not Available	681	Open in IMG/M
3300006845\|Ga0075421_102267467	Not Available	571	Open in IMG/M
3300006871\|Ga0075434_101071034	Not Available	820	Open in IMG/M
3300009553\|Ga0105249_11206877	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300010043\|Ga0126380_11599266	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300010046\|Ga0126384_11309833	Not Available	672	Open in IMG/M
3300010359\|Ga0126376_10428226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1201	Open in IMG/M
3300010360\|Ga0126372_10640456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300010361\|Ga0126378_11878312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	682	Open in IMG/M
3300010361\|Ga0126378_11916364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300010366\|Ga0126379_10618602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1170	Open in IMG/M
3300010366\|Ga0126379_12458805	Not Available	620	Open in IMG/M
3300010371\|Ga0134125_11123478	Not Available	860	Open in IMG/M
3300010376\|Ga0126381_101472917	Not Available	984	Open in IMG/M
3300010398\|Ga0126383_10171376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2050	Open in IMG/M
3300012360\|Ga0137375_10614284	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300012957\|Ga0164303_10595792	Not Available	727	Open in IMG/M
3300012971\|Ga0126369_12125048	Not Available	649	Open in IMG/M
3300012984\|Ga0164309_11573109	Not Available	563	Open in IMG/M
3300012987\|Ga0164307_10542463	Not Available	886	Open in IMG/M
3300012987\|Ga0164307_11640018	Not Available	545	Open in IMG/M
3300015359\|Ga0134085_10496483	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300015372\|Ga0132256_101853452	Not Available	711	Open in IMG/M
3300015374\|Ga0132255_101892564	Not Available	907	Open in IMG/M
3300015374\|Ga0132255_104106476	Not Available	618	Open in IMG/M
3300016294\|Ga0182041_11525242	Not Available	616	Open in IMG/M
3300016341\|Ga0182035_10837225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300016357\|Ga0182032_11483638	Not Available	588	Open in IMG/M
3300016422\|Ga0182039_11056025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300021372\|Ga0213877_10263325	Not Available	575	Open in IMG/M
3300021444\|Ga0213878_10173491	Not Available	901	Open in IMG/M
3300025898\|Ga0207692_10195222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1187	Open in IMG/M
3300025915\|Ga0207693_10207063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1542	Open in IMG/M
3300025972\|Ga0207668_11307324	Not Available	653	Open in IMG/M
3300025981\|Ga0207640_11540959	Not Available	598	Open in IMG/M
3300027874\|Ga0209465_10504756	Not Available	604	Open in IMG/M
3300027909\|Ga0209382_11692180	Not Available	621	Open in IMG/M
3300028705\|Ga0307276_10133658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300028793\|Ga0307299_10409577	Not Available	508	Open in IMG/M
3300031573\|Ga0310915_10173704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1498	Open in IMG/M
3300031640\|Ga0318555_10497981	Not Available	660	Open in IMG/M
3300031668\|Ga0318542_10516906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300031679\|Ga0318561_10184956	Not Available	1127	Open in IMG/M
3300031679\|Ga0318561_10447711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031680\|Ga0318574_10197435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300031681\|Ga0318572_10239699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300031681\|Ga0318572_10555363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300031681\|Ga0318572_10634326	Not Available	636	Open in IMG/M
3300031681\|Ga0318572_10684647	Not Available	610	Open in IMG/M
3300031713\|Ga0318496_10563668	Not Available	629	Open in IMG/M
3300031723\|Ga0318493_10099728	Not Available	1455	Open in IMG/M
3300031724\|Ga0318500_10074444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300031724\|Ga0318500_10328519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300031744\|Ga0306918_10122171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1888	Open in IMG/M
3300031744\|Ga0306918_11283575	Not Available	563	Open in IMG/M
3300031751\|Ga0318494_10163188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1259	Open in IMG/M
3300031751\|Ga0318494_10437478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300031763\|Ga0318537_10169220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300031764\|Ga0318535_10002702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5343	Open in IMG/M
3300031768\|Ga0318509_10044524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2237	Open in IMG/M
3300031770\|Ga0318521_10067158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1899	Open in IMG/M
3300031770\|Ga0318521_10410728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300031771\|Ga0318546_10128932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1688	Open in IMG/M
3300031771\|Ga0318546_11229011	Not Available	526	Open in IMG/M
3300031777\|Ga0318543_10062198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1547	Open in IMG/M
3300031777\|Ga0318543_10085148	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300031778\|Ga0318498_10042965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1990	Open in IMG/M
3300031781\|Ga0318547_10569957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031792\|Ga0318529_10058471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1677	Open in IMG/M
3300031793\|Ga0318548_10040600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300031793\|Ga0318548_10169238	Not Available	1068	Open in IMG/M
3300031794\|Ga0318503_10015452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300031799\|Ga0318565_10480534	Not Available	600	Open in IMG/M
3300031805\|Ga0318497_10254508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300031846\|Ga0318512_10303068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300031846\|Ga0318512_10456719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300031859\|Ga0318527_10409461	Not Available	578	Open in IMG/M
3300031879\|Ga0306919_10806187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300031893\|Ga0318536_10602321	Not Available	549	Open in IMG/M
3300031910\|Ga0306923_10099392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3282	Open in IMG/M
3300031910\|Ga0306923_10268942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1949	Open in IMG/M
3300031912\|Ga0306921_10906589	Not Available	1000	Open in IMG/M
3300031945\|Ga0310913_10568257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300031954\|Ga0306926_10207777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2429	Open in IMG/M
3300031959\|Ga0318530_10184963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300032025\|Ga0318507_10294010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300032041\|Ga0318549_10137380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300032044\|Ga0318558_10405377	Not Available	678	Open in IMG/M
3300032054\|Ga0318570_10040149	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300032059\|Ga0318533_11269813	Not Available	538	Open in IMG/M
3300032060\|Ga0318505_10123153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300032063\|Ga0318504_10154973	Not Available	1056	Open in IMG/M
3300032091\|Ga0318577_10225891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	896	Open in IMG/M
3300032174\|Ga0307470_10793599	Not Available	733	Open in IMG/M
3300032261\|Ga0306920_100239443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2707	Open in IMG/M
3300032261\|Ga0306920_104406994	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.50%
Plants	Host-Associated → Plants	10.62%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.54%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.22%
Loam	Environmental → Terrestrial → Soil → Loam	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.54%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_101298922	3300002906	Grasslands Soil	MSTLADNAMLVVRALTRATKDGLSFYELQQATRLAAEYLPGI
Ga0066396_100930921	3300004267	Tropical Forest Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAGSLPGILHMLEQ
Ga0066388_1018663151	3300005332	Tropical Forest Soil	MSMLADNAMLVVRALTGAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVD
Ga0066388_1022585441	3300005332	Tropical Forest Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSAL
Ga0066388_1077618232	3300005332	Tropical Forest Soil	MSTLADNAMLVVRAFTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVS
Ga0070714_1006333971	3300005435	Agricultural Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGW
Ga0070706_1003714491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQ
Ga0070698_1022357901	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLVVRALTRAKKNGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGI
Ga0070697_1002188751	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLVVRALTRAKKNGLSFYELQQATRLAAEYLPGILHMLEQQ
Ga0066698_106369001	3300005558	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQRGW
Ga0068856_1020393801	3300005614	Corn Rhizosphere	MSTLADNAMLVVQALTRAKKDGLSFYELHQATRLAATYA*
Ga0066905_1004376431	3300005713	Tropical Forest Soil	MSTLADNAMLVVRALTHAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSAL
Ga0066905_1022255012	3300005713	Tropical Forest Soil	MSTLTDNAMLVVRALTRAKKDGLSFYELQQTTRLAAGYLPGILHML
Ga0066903_1079239601	3300005764	Tropical Forest Soil	MSTLADNSMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLE
Ga0066903_1080007721	3300005764	Tropical Forest Soil	MSALADNAILVARALTCAKKDGLSFYELLRATRLAAEYLPGIL
Ga0075365_105609561	3300006038	Populus Endosphere	MSTLADNAMLVVRALTPAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGI
Ga0075028_1003819082	3300006050	Watersheds	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILH
Ga0075421_1017047501	3300006845	Populus Rhizosphere	MSTLADNAMLVVRAFTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSAL
Ga0075421_1022674672	3300006845	Populus Rhizosphere	MLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSAL
Ga0075434_1010710341	3300006871	Populus Rhizosphere	MSTLADNAMLVVRALTRATKDGLSFYELHQATRLAAGYLP
Ga0105249_112068771	3300009553	Switchgrass Rhizosphere	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPP
Ga0126380_115992661	3300010043	Tropical Forest Soil	MSTLTDNAMLVVRALTRAKKDGLSFYELQQTTRLAAGYL
Ga0126384_113098332	3300010046	Tropical Forest Soil	MSTLTDNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILH
Ga0126376_104282261	3300010359	Tropical Forest Soil	MSTLADNAVLVARALTRAKKDGLSFYELQQATRLAAGSLPGILHMLEQQGWVVSRAGRWHSAAEAAL
Ga0126372_106404561	3300010360	Tropical Forest Soil	MSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRLEQQGWV
Ga0126378_118783121	3300010361	Tropical Forest Soil	MSTLADNAVLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVV
Ga0126378_119163641	3300010361	Tropical Forest Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHM
Ga0126379_106186021	3300010366	Tropical Forest Soil	MSTLADNAVLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHML
Ga0126379_124588051	3300010366	Tropical Forest Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQ
Ga0134125_111234781	3300010371	Terrestrial Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSA
Ga0126381_1014729171	3300010376	Tropical Forest Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGI
Ga0126383_101713761	3300010398	Tropical Forest Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYL
Ga0137375_106142843	3300012360	Vadose Zone Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLGQ
Ga0164303_105957921	3300012957	Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEEQGW
Ga0126369_121250481	3300012971	Tropical Forest Soil	MSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRL
Ga0164309_115731091	3300012984	Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILH
Ga0164307_105424631	3300012987	Soil	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVV
Ga0164307_116400181	3300012987	Soil	MSTLADNAMLVVRALTRATKDGLSFYELHQATRLAAKYL
Ga0134085_104964832	3300015359	Grasslands Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQRGWVVS
Ga0132256_1018534521	3300015372	Arabidopsis Rhizosphere	MSTLTDNAMLVVRALTRAKKDGLSFYEVQQTTRLAAGSLPGILHM
Ga0132255_1018925642	3300015374	Arabidopsis Rhizosphere	MSTLADNAMLVVRAFTRAKKDGLSFYELQQATRLAAEYVPGILHMLEQQGW
Ga0132255_1041064762	3300015374	Arabidopsis Rhizosphere	MSTLADNATLVVRALTRAKKDGLSFYELQQATRLAAEYLPGIL
Ga0182041_115252421	3300016294	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVS
Ga0182035_108372252	3300016341	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLA
Ga0182032_114836382	3300016357	Soil	MSTLADNAMLVVRALTPAKKDGLSFYELLQATRLAAEYLPGILHRLEQ
Ga0182039_110560251	3300016422	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGW
Ga0213877_102633251	3300021372	Bulk Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLP
Ga0213878_101734911	3300021444	Bulk Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRVAAEYLP
Ga0207692_101952221	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAA
Ga0207693_102070635	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQ
Ga0207668_113073241	3300025972	Switchgrass Rhizosphere	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWV
Ga0207640_115409591	3300025981	Corn Rhizosphere	MSTLTDNAILVVRALTRAKKDGLSFYELQQATRLAAEYLPGI
Ga0209465_105047561	3300027874	Tropical Forest Soil	MSTLADNATLVVRALTRAKKDGLSFYELQQATRLAA
Ga0209382_116921802	3300027909	Populus Rhizosphere	MSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVD
Ga0307276_101336581	3300028705	Soil	MSTLADNPMLVVQALTRAKKDGLSFYELQQATRLAAEHLPGILHMLEEQGW
Ga0307299_104095771	3300028793	Soil	MSTLADNAMLVVRAFTRAKKDGLSFYELQQATRLAAEYLPGI
Ga0310915_101737042	3300031573	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHML
Ga0318555_104979811	3300031640	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVD
Ga0318542_105169062	3300031668	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHM
Ga0318561_101849561	3300031679	Soil	MSTLVDNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILH
Ga0318561_104477111	3300031679	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILHM
Ga0318574_101974352	3300031680	Soil	MSTLADNAMLVVRALKRATKDGLSFYELQQATRLAAEYLPGILHTLEQQG
Ga0318572_102396992	3300031681	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHM
Ga0318572_105553631	3300031681	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQ
Ga0318572_106343261	3300031681	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPGILHMLE
Ga0318572_106846471	3300031681	Soil	MSTLVDNAMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVS
Ga0318496_105636681	3300031713	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWAVSALVDGI
Ga0318493_100997281	3300031723	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWAV
Ga0318500_100744443	3300031724	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAA
Ga0318500_103285191	3300031724	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYPPGILHM
Ga0306918_101221714	3300031744	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGI
Ga0306918_112835751	3300031744	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPG
Ga0318494_101631882	3300031751	Soil	MSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQRGW
Ga0318494_104374782	3300031751	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPG
Ga0318537_101692202	3300031763	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAK
Ga0318535_100027021	3300031764	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLP
Ga0318509_100445241	3300031768	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQG
Ga0318521_100671581	3300031770	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPP
Ga0318521_104107281	3300031770	Soil	MSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQRG
Ga0318546_101289323	3300031771	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVI
Ga0318546_112290111	3300031771	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILHMLEQQ
Ga0318543_100621983	3300031777	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVD
Ga0318543_100851483	3300031777	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVISA
Ga0318498_100429654	3300031778	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWV
Ga0318547_105699572	3300031781	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQG
Ga0318529_100584711	3300031792	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGI
Ga0318548_100406004	3300031793	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVV
Ga0318548_101692381	3300031793	Soil	MSTLVDNAMLVARALTRAKKDGLSFYELQQATRLAAEYL
Ga0318503_100154524	3300031794	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWAVS
Ga0318565_104805342	3300031799	Soil	MSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVV
Ga0318497_102545082	3300031805	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILH
Ga0318512_103030682	3300031846	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVD
Ga0318512_104567191	3300031846	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILHMLE
Ga0318527_104094612	3300031859	Soil	MSTLADNAMLVVRALTPAKKDGLSFYELLQATRLAAEYLPGILHM
Ga0306919_108061871	3300031879	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGI
Ga0318536_106023212	3300031893	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILH
Ga0306923_100993925	3300031910	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSA
Ga0306923_102689423	3300031910	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYPPGILHMLE
Ga0306921_109065891	3300031912	Soil	MSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVV
Ga0310913_105682572	3300031945	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYL
Ga0306926_102077776	3300031954	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILHMLEQQGW
Ga0318530_101849632	3300031959	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPGMLRMLEQQGWVVSALVDGI
Ga0318507_102940101	3300032025	Soil	MSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGIL
Ga0318549_101373801	3300032041	Soil	MSMLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGTLHMLEQQGWVVSALVDGIAP
Ga0318558_104053771	3300032044	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGI
Ga0318570_100401491	3300032054	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGIL
Ga0318533_112698131	3300032059	Soil	MSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRLE
Ga0318505_101231531	3300032060	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKY
Ga0318504_101549732	3300032063	Soil	MSTLVDNAMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHM
Ga0318577_102258912	3300032091	Soil	MSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQG
Ga0307470_107935992	3300032174	Hardwood Forest Soil	MSTLADNAMLVVRALKRATKDGLSFYELQQATRLAA
Ga0306920_1002394431	3300032261	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALV
Ga0306920_1044069941	3300032261	Soil	MSTLADNAMLVVRALTRAKKDGLSFYELQRATRLAAEYLPGILHMLEQQGWVVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences