NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F082327

Metagenome Family F082327

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082327
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 44 residues
Representative Sequence MSAPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVN
Number of Associated Samples 83
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.65 %
% of genes near scaffold ends (potentially truncated) 98.23 %
% of genes from short scaffolds (< 2000 bps) 92.92 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.186 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water
(51.327 % of family members)
Environment Ontology (ENVO) Unclassified
(51.327 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Hypersaline (saline)
(62.832 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 15.56%    Coil/Unstructured: 84.44%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF13392HNH_3 50.44
PF00535Glycos_transf_2 5.31
PF01541GIY-YIG 4.42
PF02945Endonuclease_7 0.88
PF04665Pox_A32 0.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.19 %
All OrganismsrootAll Organisms16.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005913|Ga0075108_10222366Not Available648Open in IMG/M
3300005913|Ga0075108_10227802All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae638Open in IMG/M
3300005916|Ga0075120_10180207Not Available755Open in IMG/M
3300005919|Ga0075114_10350846Not Available508Open in IMG/M
3300005931|Ga0075119_1122147Not Available552Open in IMG/M
3300005933|Ga0075118_10118691Not Available912Open in IMG/M
3300005933|Ga0075118_10282696Not Available511Open in IMG/M
3300005936|Ga0075124_10087178All Organisms → cellular organisms → Bacteria → Proteobacteria1218Open in IMG/M
3300005939|Ga0075123_10230893Not Available688Open in IMG/M
3300005939|Ga0075123_10380163Not Available513Open in IMG/M
3300006025|Ga0075474_10228132Not Available565Open in IMG/M
3300006810|Ga0070754_10095931All Organisms → Viruses → Predicted Viral1472Open in IMG/M
3300006810|Ga0070754_10175220Not Available1012Open in IMG/M
3300006810|Ga0070754_10469505Not Available544Open in IMG/M
3300006919|Ga0070746_10023629All Organisms → cellular organisms → Bacteria3355Open in IMG/M
3300007344|Ga0070745_1045274All Organisms → Viruses → Predicted Viral1831Open in IMG/M
3300007345|Ga0070752_1217429Not Available755Open in IMG/M
3300007640|Ga0070751_1246932Not Available679Open in IMG/M
3300010296|Ga0129348_1229310Not Available627Open in IMG/M
3300010316|Ga0136655_1191418Not Available609Open in IMG/M
3300010368|Ga0129324_10262944Not Available685Open in IMG/M
3300011188|Ga0136587_1055934Not Available966Open in IMG/M
3300012032|Ga0136554_1108710Not Available533Open in IMG/M
3300012145|Ga0136566_1044106Not Available750Open in IMG/M
3300012147|Ga0136588_1035873Not Available855Open in IMG/M
3300017697|Ga0180120_10125825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus toyonensis1099Open in IMG/M
3300017719|Ga0181390_1017497All Organisms → Viruses → Predicted Viral2391Open in IMG/M
3300017737|Ga0187218_1079462Not Available797Open in IMG/M
3300017749|Ga0181392_1235733Not Available518Open in IMG/M
3300017751|Ga0187219_1187530Not Available577Open in IMG/M
3300022068|Ga0212021_1101342Not Available591Open in IMG/M
3300022169|Ga0196903_1045131Not Available511Open in IMG/M
3300022821|Ga0222673_1027465All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium775Open in IMG/M
3300022821|Ga0222673_1035059Not Available650Open in IMG/M
3300022821|Ga0222673_1037381Not Available622Open in IMG/M
3300022827|Ga0222647_1024058Not Available912Open in IMG/M
3300022839|Ga0222649_1016174Not Available1024Open in IMG/M
3300022842|Ga0222632_1041429Not Available704Open in IMG/M
3300022843|Ga0222631_1008295Not Available1865Open in IMG/M
3300022851|Ga0222691_1024687Not Available926Open in IMG/M
3300022851|Ga0222691_1025325Not Available909Open in IMG/M
3300022851|Ga0222691_1031262Not Available781Open in IMG/M
3300022851|Ga0222691_1033300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus toyonensis745Open in IMG/M
3300022853|Ga0222652_1053888Not Available557Open in IMG/M
3300022856|Ga0222671_1071558Not Available617Open in IMG/M
3300022856|Ga0222671_1086002Not Available547Open in IMG/M
3300022856|Ga0222671_1095789Not Available510Open in IMG/M
3300022866|Ga0222651_1057805Not Available774Open in IMG/M
3300022866|Ga0222651_1086244Not Available588Open in IMG/M
3300022866|Ga0222651_1099797Not Available531Open in IMG/M
3300022867|Ga0222629_1030237All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae837Open in IMG/M
3300022884|Ga0222701_1032273Not Available937Open in IMG/M
3300022885|Ga0222662_1017962Not Available1678Open in IMG/M
3300022885|Ga0222662_1049614Not Available840Open in IMG/M
3300022885|Ga0222662_1058262All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium755Open in IMG/M
3300023227|Ga0222690_1017373Not Available952Open in IMG/M
3300023230|Ga0222709_1015015Not Available991Open in IMG/M
3300023235|Ga0222634_1038443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus toyonensis736Open in IMG/M
3300023236|Ga0222659_1021446Not Available994Open in IMG/M
3300023237|Ga0222650_1017121Not Available1636Open in IMG/M
3300023237|Ga0222650_1017651Not Available1597Open in IMG/M
3300023237|Ga0222650_1038071Not Available871Open in IMG/M
3300023240|Ga0222676_1014155Not Available1474Open in IMG/M
3300023242|Ga0222708_1017759Not Available1170Open in IMG/M
3300023242|Ga0222708_1028166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus toyonensis862Open in IMG/M
3300023245|Ga0222655_1004436Not Available3498Open in IMG/M
3300023245|Ga0222655_1037666All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium775Open in IMG/M
3300023245|Ga0222655_1048427Not Available647Open in IMG/M
3300023245|Ga0222655_1057465Not Available570Open in IMG/M
3300023246|Ga0222682_1068309Not Available594Open in IMG/M
3300023251|Ga0222683_1026471Not Available978Open in IMG/M
3300023251|Ga0222683_1030303Not Available900Open in IMG/M
3300023294|Ga0222670_1033462Not Available855Open in IMG/M
3300023294|Ga0222670_1063509Not Available516Open in IMG/M
3300023296|Ga0222664_1035984Not Available896Open in IMG/M
3300023299|Ga0222702_1076580All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae666Open in IMG/M
3300023501|Ga0222686_1044853All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae605Open in IMG/M
(restricted) 3300024518|Ga0255048_10662135Not Available504Open in IMG/M
3300025438|Ga0208770_1070498Not Available634Open in IMG/M
3300025502|Ga0208903_1077903Not Available773Open in IMG/M
3300025543|Ga0208303_1005721Not Available4216Open in IMG/M
3300025603|Ga0208414_1029940Not Available1669Open in IMG/M
3300025603|Ga0208414_1112941All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae703Open in IMG/M
3300025661|Ga0208905_1084555Not Available978Open in IMG/M
3300025671|Ga0208898_1068431Not Available1192Open in IMG/M
3300025698|Ga0208771_1011806Not Available3165Open in IMG/M
3300025698|Ga0208771_1067824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus toyonensis1052Open in IMG/M
3300025698|Ga0208771_1098202Not Available835Open in IMG/M
3300025698|Ga0208771_1207085Not Available522Open in IMG/M
3300025736|Ga0207997_1255826Not Available507Open in IMG/M
3300025853|Ga0208645_1030911Not Available2783Open in IMG/M
3300027983|Ga0209284_10296406Not Available819Open in IMG/M
3300028361|Ga0306872_106695All Organisms → cellular organisms → Bacteria2089Open in IMG/M
3300028408|Ga0306864_1021180Not Available991Open in IMG/M
3300031208|Ga0307931_1007227Not Available5624Open in IMG/M
3300031208|Ga0307931_1052547Not Available855Open in IMG/M
3300031213|Ga0307937_1058507Not Available826Open in IMG/M
3300031214|Ga0307958_1034618Not Available949Open in IMG/M
3300031221|Ga0307948_1120473Not Available835Open in IMG/M
3300031227|Ga0307928_10142142Not Available1346Open in IMG/M
3300031329|Ga0307934_1070914Not Available898Open in IMG/M
3300031339|Ga0307932_1053065Not Available1090Open in IMG/M
3300031339|Ga0307932_1103414Not Available746Open in IMG/M
3300031391|Ga0307954_1050665Not Available1484Open in IMG/M
3300031394|Ga0307963_1110886Not Available817Open in IMG/M
3300031398|Ga0307979_1075249Not Available817Open in IMG/M
3300031399|Ga0307968_1112181Not Available770Open in IMG/M
3300031565|Ga0307379_10726532Not Available887Open in IMG/M
3300031566|Ga0307378_11144524Not Available621Open in IMG/M
3300032462|Ga0335396_10854210Not Available542Open in IMG/M
3300033742|Ga0314858_177358Not Available548Open in IMG/M
3300034375|Ga0348336_198066Not Available539Open in IMG/M
3300034418|Ga0348337_177296Not Available562Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water51.33%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake16.81%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous13.27%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake4.42%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.54%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.77%
Lake WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water1.77%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.77%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005916Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKLEnvironmentalOpen in IMG/M
3300005919Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKMEnvironmentalOpen in IMG/M
3300005931Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9EnvironmentalOpen in IMG/M
3300005933Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKEEnvironmentalOpen in IMG/M
3300005936Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKSEnvironmentalOpen in IMG/M
3300005939Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKXEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011188Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563EnvironmentalOpen in IMG/M
3300012032Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #431EnvironmentalOpen in IMG/M
3300012145Saline lake microbial communities from Deep lake, Antarctica - Metagenome #2EnvironmentalOpen in IMG/M
3300012147Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #564EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022821Saline water microbial communities from Ace Lake, Antarctica - #801EnvironmentalOpen in IMG/M
3300022827Saline water microbial communities from Ace Lake, Antarctica - #333EnvironmentalOpen in IMG/M
3300022839Saline water microbial communities from Ace Lake, Antarctica - #337EnvironmentalOpen in IMG/M
3300022842Saline water microbial communities from Ace Lake, Antarctica - #46EnvironmentalOpen in IMG/M
3300022843Saline water microbial communities from Ace Lake, Antarctica - #5EnvironmentalOpen in IMG/M
3300022851Saline water microbial communities from Ace Lake, Antarctica - #1237EnvironmentalOpen in IMG/M
3300022853Saline water microbial communities from Ace Lake, Antarctica - #371EnvironmentalOpen in IMG/M
3300022856Saline water microbial communities from Ace Lake, Antarctica - #797EnvironmentalOpen in IMG/M
3300022866Saline water microbial communities from Ace Lake, Antarctica - #369EnvironmentalOpen in IMG/M
3300022867Saline water microbial communities from Ace Lake, Antarctica - #1EnvironmentalOpen in IMG/M
3300022884Saline water microbial communities from Ace Lake, Antarctica - #1502EnvironmentalOpen in IMG/M
3300022885Saline water microbial communities from Ace Lake, Antarctica - #600EnvironmentalOpen in IMG/M
3300023227Saline water microbial communities from Ace Lake, Antarctica - #1234EnvironmentalOpen in IMG/M
3300023230Saline water microbial communities from Ace Lake, Antarctica - #1692EnvironmentalOpen in IMG/M
3300023235Saline water microbial communities from Ace Lake, Antarctica - #50EnvironmentalOpen in IMG/M
3300023236Saline water microbial communities from Ace Lake, Antarctica - #547EnvironmentalOpen in IMG/M
3300023237Saline water microbial communities from Ace Lake, Antarctica - #367EnvironmentalOpen in IMG/M
3300023240Saline water microbial communities from Ace Lake, Antarctica - #870EnvironmentalOpen in IMG/M
3300023242Saline water microbial communities from Ace Lake, Antarctica - #1576EnvironmentalOpen in IMG/M
3300023245Saline water microbial communities from Ace Lake, Antarctica - #423EnvironmentalOpen in IMG/M
3300023246Saline water microbial communities from Ace Lake, Antarctica - #1008EnvironmentalOpen in IMG/M
3300023251Saline water microbial communities from Ace Lake, Antarctica - #1073EnvironmentalOpen in IMG/M
3300023294Saline water microbial communities from Ace Lake, Antarctica - #732EnvironmentalOpen in IMG/M
3300023296Saline water microbial communities from Ace Lake, Antarctica - #604EnvironmentalOpen in IMG/M
3300023299Saline water microbial communities from Ace Lake, Antarctica - #1504EnvironmentalOpen in IMG/M
3300023501Saline water microbial communities from Ace Lake, Antarctica - #1159EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025438Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)EnvironmentalOpen in IMG/M
3300025502Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025603Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)EnvironmentalOpen in IMG/M
3300025661Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKS (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025698Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKX (SPAdes)EnvironmentalOpen in IMG/M
3300025736Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027983Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)EnvironmentalOpen in IMG/M
3300028361Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #498 (v2)EnvironmentalOpen in IMG/M
3300028408Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #430 (v2)EnvironmentalOpen in IMG/M
3300031208Saline water microbial communities from Organic Lake, Antarctica - #47EnvironmentalOpen in IMG/M
3300031213Saline water microbial communities from Organic Lake, Antarctica - #3EnvironmentalOpen in IMG/M
3300031214Saline water microbial communities from Organic Lake, Antarctica - #492EnvironmentalOpen in IMG/M
3300031221Saline water microbial communities from Organic Lake, Antarctica - #280EnvironmentalOpen in IMG/M
3300031227Saline water microbial communities from Ace Lake, Antarctica - #232EnvironmentalOpen in IMG/M
3300031329Saline water microbial communities from Organic Lake, Antarctica - #90EnvironmentalOpen in IMG/M
3300031339Saline water microbial communities from Organic Lake, Antarctica - #48EnvironmentalOpen in IMG/M
3300031391Saline water microbial communities from Organic Lake, Antarctica - #437EnvironmentalOpen in IMG/M
3300031394Saline water microbial communities from Organic Lake, Antarctica - #594EnvironmentalOpen in IMG/M
3300031398Marine microbial communities from Ellis Fjord, Antarctic Ocean - #1058EnvironmentalOpen in IMG/M
3300031399Saline water microbial communities from Organic Lake, Antarctica - #650EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300032462Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0075108_1022236613300005913Saline LakeMSSSPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNVDI
Ga0075108_1022780213300005913Saline LakeMSSSPDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNIDM
Ga0075120_1018020713300005916Saline LakeMSQAVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNIDM
Ga0075114_1035084613300005919Saline LakeMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANGQTFTAGQ
Ga0075119_112214713300005931Saline LakeMSSSPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNVD
Ga0075118_1011869133300005933Saline LakeMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANGQTFTAGQTVN
Ga0075118_1028269613300005933Saline LakeMSASAPDAMSESLNYPALKRRAVASRSYRVKVNPAN
Ga0075124_1008717843300005936Lake WaterMSQSVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVN
Ga0075123_1023089313300005939Saline LakeMSQSVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNI
Ga0075123_1038016313300005939Saline LakeMYYYTIMSSVDAMAESLNYPNMKRRAVASRSYRVKISPSNG
Ga0075474_1022813213300006025AqueousMADAMAESLNYASQKRRAVASRSYRVKISPVNGQNFTAGQT
Ga0070754_1009593133300006810AqueousMSQAPDAMSESLNYPMQKRRAVASRSYRVKISPNNGQTFTDGQT
Ga0070754_1017522033300006810AqueousMAESLNYASQKRRAVSSRSYRVKISPVNGQNFIAGQTVNIDMPTVTSTYVNWN
Ga0070754_1046950533300006810AqueousMSDAMAESLNYASQKRRAVSSRSYRVKISPVNGQNFTAGQTVNIDLPSNLAAT
Ga0070746_1002362913300006919AqueousMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTFVGGQTINIDMPSNLA
Ga0070745_104527443300007344AqueousMSQSPDAMSESLNYPMAKRRAVASRSYRVKISPNNGQTFTDGQT
Ga0070752_121742933300007345AqueousMSAPDAMSESLNYPMQKRRAVASRSYRVKISPNNGQTFTDGQTVNIDMPSNLAG
Ga0070751_124693233300007640AqueousMSAPDAMSESLNYPMQKRRAVASRSYRVKVSPNNGQTFTDGQTVNI
Ga0129348_122931013300010296Freshwater To Marine Saline GradientMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTF
Ga0136655_119141813300010316Freshwater To Marine Saline GradientMSAPDAMSESLNFPSMKRRAVASRSYRVKVSPSNGQNFSAGQTV
Ga0129324_1026294413300010368Freshwater To Marine Saline GradientMSGAPDAMSESLNFPMQKRRAVASRSYRVKVSPSNGQNFTAG
Ga0136587_105593413300011188Saline LakeMSSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTF
Ga0136554_110871013300012032Saline LakeMSATDAISESLNYPMMKRRAVASRSYRVKISPNNGQTLTDDQTINIDMPSNLAGTYCN*
Ga0136566_104410633300012145Saline LakeMYYYTIMASSIDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDG
Ga0136588_103587313300012147Saline LakeMSAPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVN
Ga0180120_1012582513300017697Freshwater To Marine Saline GradientMSAPDAMSESLNFPSMKRRAVASRSYRVKVSPSNGQNFSAGQ
Ga0181390_101749713300017719SeawaterMSAPDAMSESLTYPMQKRRAVASRSYRVKISPNNGQNFTDGQTVNIDMP
Ga0187218_107946213300017737SeawaterMSAPDAMSESLNYPMQKRRAVASRSYRVKISPNNGQNFTDGQ
Ga0181392_123573333300017749SeawaterMSAPDAMSESLNYPMQKRRAVASRSYRVKISPNNGQNFSDGQTVNI
Ga0187219_118753033300017751SeawaterMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTFT
Ga0212021_110134213300022068AqueousMSAPDAMSESLNYPMQKRRAVASRSYRVKVSPNNGQTFTDGQI
Ga0196903_104513113300022169AqueousMSAPDAMSESLNFPMQKRRAVASRSYRVKISPSNGQNFTAGQTVN
Ga0222673_102746513300022821Saline WaterMYYYTIMSAPDALAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNVD
Ga0222673_103505913300022821Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQ
Ga0222673_103738133300022821Saline WaterMSSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQT
Ga0222647_102405833300022827Saline WaterMSAPDVMSESLNYPALKRRAVASRSYRVKVNPANGQTFTAGQTVNL
Ga0222649_101617443300022839Saline WaterMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANGQ
Ga0222632_104142923300022842Saline WaterMYYYTIMSAPDALAESLNFPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNV
Ga0222631_100829513300022843Saline WaterMSDAMAESLNYPAMKMRAVASRSYRVKISPVNGQTFKSGQTINIDMPSNL
Ga0222691_102468713300022851Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQ
Ga0222691_102532533300022851Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVN
Ga0222691_103126213300022851Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNG
Ga0222691_103330013300022851Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNLDMPSN
Ga0222652_105388813300022853Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNLDMPSN
Ga0222671_107155813300022856Saline WaterMYYYTIMSAPDALAESLNYPNMKRRAVASRSYRVKI
Ga0222671_108600213300022856Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNLD
Ga0222671_109578913300022856Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVN
Ga0222651_105780533300022866Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNN
Ga0222651_108624423300022866Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNG
Ga0222651_109979713300022866Saline WaterMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANGQTF
Ga0222629_103023713300022867Saline WaterMSSVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNID
Ga0222701_103227333300022884Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKI
Ga0222662_101796213300022885Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNVD
Ga0222662_104961413300022885Saline WaterMYYYTIMAQSVDALAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNID
Ga0222662_105826223300022885Saline WaterMYYYTIMSAPDALAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQ
Ga0222690_101737333300023227Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNLDMPSNL
Ga0222709_101501513300023230Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNL
Ga0222634_103844323300023235Saline WaterMSSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTF
Ga0222659_102144613300023236Saline WaterMSAPDALAESLMYPDTKRRAVASRSYRTKISPNNGQTFTSGQVVNIDMP
Ga0222650_101712113300023237Saline WaterMSQSVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNIDM
Ga0222650_101765143300023237Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQT
Ga0222650_103807133300023237Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNI
Ga0222676_101415543300023240Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDG
Ga0222708_101775933300023242Saline WaterMSDAMAESLNYPAMKMRAVASRSYRVKISPVNGQTFKSGQT
Ga0222708_102816613300023242Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVN
Ga0222655_100443613300023245Saline WaterMSDAMAESLNYPSMKMRAVASRSYRVKISPVNGQTFKSGQTINIDMPSNL
Ga0222655_103766623300023245Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNIDM
Ga0222655_104842713300023245Saline WaterMSSAPDAMSESLNYPMMKRRAVASRSYRVKISPNNGQT
Ga0222655_105746513300023245Saline WaterMSQSPDAMSESLNYPSMKRRAVASRSYRVKISPNNGQTF
Ga0222682_106830923300023246Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSN
Ga0222683_102647113300023251Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNIDM
Ga0222683_103030333300023251Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNI
Ga0222670_103346233300023294Saline WaterMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANG
Ga0222670_106350913300023294Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNLDM
Ga0222664_103598433300023296Saline WaterMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTF
Ga0222702_107658023300023299Saline WaterMSQAVDAMAESLNFPNMKRRAVASRSYRVKISPNNG
Ga0222686_104485313300023501Saline WaterMSSVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQTVN
(restricted) Ga0255048_1066213533300024518SeawaterMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTFTGGQPST
Ga0208770_107049823300025438Saline LakeMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQT
Ga0208903_107790313300025502Saline LakeMSQSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVN
Ga0208303_100572183300025543AqueousMSAPDAMSESLNFPSMKRRAVASRSYRVKVSPSNGQNFSAGQTVN
Ga0208414_102994033300025603Saline LakeMSAPDALAESLNYPDMKRRSVASRSYRTKISPNNGQTFTAGQVV
Ga0208414_111294123300025603Saline LakeMSQAVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQT
Ga0208905_108455513300025661Lake WaterMSSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQT
Ga0208898_106843133300025671AqueousMSAPDAMSESLNYPMAKRRAVASRSYRVKISPNNGQTFTDGQTVNI
Ga0208771_101180613300025698Saline LakeMYYYTIMSSVDAMAESLNYPNMKRRAVASRSYRVKISP
Ga0208771_106782413300025698Saline LakeMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFR
Ga0208771_109820233300025698Saline LakeMSSSPDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQ
Ga0208771_120708513300025698Saline LakeMSSVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVN
Ga0207997_125582613300025736Saline LakeMSAPDALAESLMYPDMRRRAVASRSYRTKISPNNGQTFTSGQVVNI
Ga0208645_103091163300025853AqueousMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTFVGGQTINIDMPS
Ga0209284_1029640633300027983FreshwaterMSAPDALAESLMYPDMRRRAVASRSYRTKISPNNGQT
Ga0306872_10669553300028361Saline LakeMYYYTIMSAPDAMAESLNYPNMKRRAVASRSYRVKISP
Ga0306864_102118013300028408Saline LakeMSQAVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTFRDGQ
Ga0307931_100722773300031208Saline WaterMSATDAISESLNYPMMKRRAVASRSYRVKISPNNGQTLTDDQTINIDMPSNLAGTYCN
Ga0307931_105254733300031208Saline WaterMSAPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQ
Ga0307937_105850713300031213Saline WaterMAQSVDAMAESLNFPNMKRRAVASRSYRVKISPSNGQTFTDGQTVNI
Ga0307958_103461833300031214Saline WaterMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQTVNID
Ga0307948_112047313300031221Saline WaterMSAPDAMAESLNFPNMKRRAVASRSYRVKISPSNG
Ga0307928_1014214243300031227Saline WaterMYYYTIMASSVDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTFTDGQT
Ga0307934_107091413300031329Saline WaterMSSVDAMAESLNFPNMKRRAVASRSYRVKISPSNGQ
Ga0307932_105306513300031339Saline WaterMSAPDAMAESLNFPNMKRRAVASRSYRVKISPSNGQTF
Ga0307932_110341433300031339Saline WaterMSQSPDAMSESLNYPMMKRRAVASRSYRVKISPNNGQTFRDGQTVNIDMPSN
Ga0307954_105066513300031391Saline WaterMSAPDAMSESLNYPMMKRRAVASRSYRVKISPNNGQT
Ga0307963_111088613300031394Saline WaterMSQAVDAMAESLNFPNMKRRAVASRSYRVKISPNNGQTF
Ga0307979_107524913300031398Saline WaterMSQAVDAMAESLNYPNMKRRAVASRSYRVKISPNNGQTFRDGQ
Ga0307968_111218113300031399Saline WaterMAQSPDAMAESLNYPNMKRRAVASRSYRVKISPSNGQTF
Ga0307379_1072653233300031565SoilMSAPDAMSESLNFPSMKRRAVASRSYRVKISPSNGQNF
Ga0307378_1114452413300031566SoilMSAPDAMSESLNYPMQKRRAVASRSYRVKISPNNGQTFTAGQTV
Ga0335396_1085421013300032462FreshwaterMSAPDAMSESLNYPALKRRAVASRSYRVKVNPANGQTFTAGQTVNIDMPS
Ga0314858_177358_417_5483300033742Sea-Ice BrineMSAPDAMSESLNYPAQKRRAVASRSYRVKVAPSNGQTFTAVIPL
Ga0348336_198066_1_1353300034375AqueousMSDAFSESLAYPQQKRRAVASRSYRVKINPSNGQTFVGGQTINID
Ga0348337_177296_3_1403300034418AqueousMSDAMAESLNYASQKRRAVSSRSYRVKISPVNGQNFTAGQTVNIDL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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