Metagenome Family F082333

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082333
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	74 residues
Representative Sequence	CIMGTGLLTLAVVTAQVASSFVAQGPSRARPAPQDEAARREVTLAELDQRLARIEHLLTAAHPGNSPGASDGD
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.69 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (51.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.903 % of family members)
Environment Ontology (ENVO)	Unclassified (59.292 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.018 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.62% β-sheet: 0.00% Coil/Unstructured: 62.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00145	DNA_methylase	7.96
PF07784	DUF1622	4.42
PF00561	Abhydrolase_1	2.65
PF01061	ABC2_membrane	2.65
PF06736	TMEM175	1.77
PF03992	ABM	1.77
PF12724	Flavodoxin_5	1.77
PF07885	Ion_trans_2	1.77
PF00106	adh_short	0.88
PF00571	CBS	0.88
PF00903	Glyoxalase	0.88
PF00578	AhpC-TSA	0.88
PF00892	EamA	0.88
PF01243	Putative_PNPOx	0.88
PF12730	ABC2_membrane_4	0.88
PF07992	Pyr_redox_2	0.88
PF13620	CarboxypepD_reg	0.88
PF08818	DUF1801	0.88
PF00005	ABC_tran	0.88
PF09015	NgoMIV_restric	0.88
PF07883	Cupin_2	0.88
PF10009	DUF2252	0.88
PF07366	SnoaL	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	7.96
COG4828	Uncharacterized membrane protein	Function unknown [S]	4.42
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.77
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.88
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.88 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Kribbella aluminosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella aluminosa	0.88 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005435\|Ga0070714_100298398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1501	Open in IMG/M
3300005435\|Ga0070714_100299186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1499	Open in IMG/M
3300005436\|Ga0070713_101521221	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005437\|Ga0070710_10060637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2153	Open in IMG/M
3300006028\|Ga0070717_10532160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1064	Open in IMG/M
3300006806\|Ga0079220_10438533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300009792\|Ga0126374_11546684	Not Available	546	Open in IMG/M
3300010358\|Ga0126370_10367373	Not Available	1169	Open in IMG/M
3300010376\|Ga0126381_101259314	Not Available	1069	Open in IMG/M
3300010863\|Ga0124850_1081780	Not Available	959	Open in IMG/M
3300012917\|Ga0137395_10367861	Not Available	1026	Open in IMG/M
3300012960\|Ga0164301_11486747	Not Available	557	Open in IMG/M
3300016294\|Ga0182041_10535775	Not Available	1020	Open in IMG/M
3300016294\|Ga0182041_10574275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300016294\|Ga0182041_11409098	Not Available	640	Open in IMG/M
3300016294\|Ga0182041_11638318	Not Available	595	Open in IMG/M
3300016319\|Ga0182033_10867747	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300016341\|Ga0182035_10391341	Not Available	1166	Open in IMG/M
3300016357\|Ga0182032_12009365	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300016371\|Ga0182034_10111801	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300016371\|Ga0182034_10308510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300016387\|Ga0182040_10839755	Not Available	759	Open in IMG/M
3300016387\|Ga0182040_11007513	Not Available	695	Open in IMG/M
3300016422\|Ga0182039_12046180	Not Available	527	Open in IMG/M
3300016445\|Ga0182038_10158427	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300016445\|Ga0182038_11590469	Not Available	588	Open in IMG/M
3300017972\|Ga0187781_10345496	Not Available	1059	Open in IMG/M
3300017974\|Ga0187777_10864918	Not Available	648	Open in IMG/M
3300017993\|Ga0187823_10092533	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300017999\|Ga0187767_10082470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300018012\|Ga0187810_10529632	Not Available	505	Open in IMG/M
3300018060\|Ga0187765_10675361	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300018086\|Ga0187769_11124586	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300018089\|Ga0187774_10380390	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300020581\|Ga0210399_10104723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella aluminosa	2317	Open in IMG/M
3300020581\|Ga0210399_10852623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300021171\|Ga0210405_11330544	Not Available	526	Open in IMG/M
3300021178\|Ga0210408_10538866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300021181\|Ga0210388_10267546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1500	Open in IMG/M
3300021403\|Ga0210397_10818444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300021407\|Ga0210383_10431540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300021432\|Ga0210384_10272258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1524	Open in IMG/M
3300021559\|Ga0210409_10419817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300021559\|Ga0210409_10996970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300021560\|Ga0126371_10668458	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300021560\|Ga0126371_12428590	Not Available	634	Open in IMG/M
3300025928\|Ga0207700_10136212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2012	Open in IMG/M
3300025928\|Ga0207700_11789846	Not Available	540	Open in IMG/M
3300027049\|Ga0207806_1024977	Not Available	689	Open in IMG/M
3300027889\|Ga0209380_10138073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300027889\|Ga0209380_10704530	Not Available	579	Open in IMG/M
3300031544\|Ga0318534_10719154	Not Available	563	Open in IMG/M
3300031546\|Ga0318538_10386250	Not Available	757	Open in IMG/M
3300031549\|Ga0318571_10012264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2061	Open in IMG/M
3300031549\|Ga0318571_10022469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1668	Open in IMG/M
3300031564\|Ga0318573_10226139	Not Available	995	Open in IMG/M
3300031572\|Ga0318515_10595097	Not Available	588	Open in IMG/M
3300031573\|Ga0310915_10678516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300031679\|Ga0318561_10201670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1079	Open in IMG/M
3300031682\|Ga0318560_10102468	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300031713\|Ga0318496_10400376	Not Available	759	Open in IMG/M
3300031723\|Ga0318493_10024101	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300031723\|Ga0318493_10460746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	700	Open in IMG/M
3300031724\|Ga0318500_10006480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3830	Open in IMG/M
3300031736\|Ga0318501_10411477	Not Available	731	Open in IMG/M
3300031736\|Ga0318501_10803467	Not Available	521	Open in IMG/M
3300031751\|Ga0318494_10441657	Not Available	756	Open in IMG/M
3300031751\|Ga0318494_10902417	Not Available	518	Open in IMG/M
3300031765\|Ga0318554_10072166	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300031769\|Ga0318526_10387444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300031770\|Ga0318521_10307261	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031779\|Ga0318566_10276637	Not Available	831	Open in IMG/M
3300031781\|Ga0318547_10499984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	751	Open in IMG/M
3300031781\|Ga0318547_10851007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	569	Open in IMG/M
3300031782\|Ga0318552_10541376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	594	Open in IMG/M
3300031793\|Ga0318548_10087377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1480	Open in IMG/M
3300031819\|Ga0318568_10989305	Not Available	519	Open in IMG/M
3300031831\|Ga0318564_10210173	Not Available	865	Open in IMG/M
3300031845\|Ga0318511_10487402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300031879\|Ga0306919_10848025	Not Available	701	Open in IMG/M
3300031893\|Ga0318536_10193005	Not Available	1037	Open in IMG/M
3300031912\|Ga0306921_10077281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3829	Open in IMG/M
3300031912\|Ga0306921_10233520	Not Available	2154	Open in IMG/M
3300031912\|Ga0306921_11838462	Not Available	650	Open in IMG/M
3300031912\|Ga0306921_12405039	Not Available	549	Open in IMG/M
3300031912\|Ga0306921_12483280	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031941\|Ga0310912_10701154	Not Available	785	Open in IMG/M
3300031942\|Ga0310916_11387124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300031945\|Ga0310913_10928616	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300031946\|Ga0310910_10859419	Not Available	713	Open in IMG/M
3300031954\|Ga0306926_10510003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1477	Open in IMG/M
3300032001\|Ga0306922_11744935	Not Available	615	Open in IMG/M
3300032042\|Ga0318545_10320317	Not Available	558	Open in IMG/M
3300032063\|Ga0318504_10032909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2074	Open in IMG/M
3300032064\|Ga0318510_10291685	Not Available	678	Open in IMG/M
3300032090\|Ga0318518_10264205	Not Available	883	Open in IMG/M
3300032091\|Ga0318577_10538197	Not Available	556	Open in IMG/M
3300032180\|Ga0307471_104231590	Not Available	507	Open in IMG/M
3300032261\|Ga0306920_104355662	Not Available	508	Open in IMG/M
3300032892\|Ga0335081_10173296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	3038	Open in IMG/M
3300032892\|Ga0335081_12061770	Not Available	606	Open in IMG/M
3300032897\|Ga0335071_10899659	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300032954\|Ga0335083_10155800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2149	Open in IMG/M
3300032954\|Ga0335083_10433116	Not Available	1115	Open in IMG/M
3300033004\|Ga0335084_10999894	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300033158\|Ga0335077_10019624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8470	Open in IMG/M
3300033158\|Ga0335077_11988076	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300033290\|Ga0318519_10033997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2434	Open in IMG/M
3300033290\|Ga0318519_10580365	Not Available	680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.23%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.23%
Freshwater	Environmental → Aquatic → Freshwater	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.39%
Loam	Environmental → Terrestrial → Soil → Loam	9.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070714_1002983981	3300005435	Agricultural Soil	RITACFIMGTGLLTLAVVTAQVASSFVAQASSRAKPAPPEEAARREVTLAELDERLDRIERLLAALHPGGSPGAIDSG*
Ga0070714_1002991861	3300005435	Agricultural Soil	RITACFIMGTGLLTLAVVTAQVASSFVAQASSRAKPAPPDEEVRREVTLAELDERLDRIERLLAAVHPGSSPGTIDSG*
Ga0070713_1015212211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TACFIMGTGLLTLAVVTAQVASSFVAQASSRAKPAPPDEEVRREVTLAELDERLDRIERLLAAVHPGSSPGAIGSG*
Ga0070710_100606371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GLLTLAVVTAQVASSFVAQASSRAKPAPPEEAARREVTLAELDERLDRIERLLAALHPGGSPGAIDSG*
Ga0070717_105321603	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GLLTLAVVTAQVASSFVAQGPSRARSAREDEAARPEVTFEELDQRLARIEQLLTAAHPKGSPGAPDGE*
Ga0079220_104385332	3300006806	Agricultural Soil	GGRITACFIMGTGLLTLAVVTAQVASSFVAQGPSRARPAAPPAEAARRDVTLAELDQRLARIEQLLTALRSGSSPGAIDGD*
Ga0126374_115466842	3300009792	Tropical Forest Soil	TIAGRIAACFIMGTGLLTLAVVTAQVASSFVAQSPSRARPAPQDEAARREVTLAELDERLARIEGLLTGSNPGNSPGAGVGD*
Ga0126370_103673734	3300010358	Tropical Forest Soil	VTLAVITAQVASSFVAQGPSRATPAPQDQAASPEVTLTELDQRLARIERLLTATQPGSSPGAIDDD*
Ga0126381_1012593141	3300010376	Tropical Forest Soil	TLAVVTAQVASSFVTQAPSRARPAPPEEAVRSEVTLAALDQRLARIEGLLTATHPGNSPGATEGD*
Ga0124850_10817801	3300010863	Tropical Forest Soil	MGTGLLTLAVVTAQVASSFVAQGPGPATPASQDEAASREVTSAELDQRLARIERLLTASQGNSATD*
Ga0137395_103678612	3300012917	Vadose Zone Soil	VTIWGRITACFIMGTGLLTLAVITAQVASSFVTQAASRAQRGPQVEPVTPEVTLAELDQRLARIEELLTTAANKRTPAPPTAPSGA*
Ga0164301_114867472	3300012960	Soil	VVTAQVASSFVAQGSSRAAPAPQDEAARREVTLAELDQRLARIERLLTATHPGNSSGAIDSD*
Ga0182041_105357751	3300016294	Soil	GGRITACFIMGTGVLTLAVITAQVASSFVGQDSSQARPAPQDEPAGHEVTMAELDQRLARIERLLTAPHTGTSPGAIDGD
Ga0182041_105742753	3300016294	Soil	CFIMATGLLTLAVVTAQVASSFVAQGPSRARPAPPEEAVRREVTLAELDERLARIERLLTAANPGNSPGAP
Ga0182041_114090981	3300016294	Soil	AVAGRITACFIMGTGLLTLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLAQIERLLTASHPGNSPGSIKGD
Ga0182041_116383181	3300016294	Soil	TTGGRITACFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPRDETGRSEVTLAELDQRLARIERLLTAAHPGNSAGAIEGD
Ga0182033_108677471	3300016319	Soil	TPVTATGRITACFIMGIGVLTLAVVTAQVASSFVAQGSSRARLAPSPDPATHEVTLAELDRRLARIEELLTDRNGLN
Ga0182035_103913412	3300016341	Soil	PVTAGGRVTACFIMGTGLLTLAVVTAQVASSFVAQGSSRARPAREDEAARREVTLAELDQRLARIENLLTAAQPGNSPGTDPP
Ga0182032_120093651	3300016357	Soil	TLAVVTAQVASSFVAQGPSRARSAREDEAARREVTLAELDQRLARIENLLTTAQPGNSPGTDPP
Ga0182034_101118012	3300016371	Soil	WGRITACFVMATGLLTLAVVTAQVASSFVAQSPGQPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD
Ga0182034_103085103	3300016371	Soil	ACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0182040_108397551	3300016387	Soil	FIMGTGLLTLAVITAQVASSFVSQDSTRDRPAPQEEPGRREVTMAELDQRLARIERLLTARHTGRSPGAIDGD
Ga0182040_110075131	3300016387	Soil	TTGGRITACFIMGTGVLTLAVITAQVASSFVGQDSSQARPAPQDEPAGHEVTMAELDQRLARIERLLTAPHTGTSPGTIDGD
Ga0182037_102322483	3300016404	Soil	TAQAASSFVAQSPGQPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD
Ga0182039_120461802	3300016422	Soil	RITACFIMGTGLLTLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLARIERLLTASHPGS
Ga0182038_101584272	3300016445	Soil	MATGLLTLAVVTAQVASSFVAQSPGQPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD
Ga0182038_115904691	3300016445	Soil	GRITACFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPPGETGEREVTLAELDQRLARIERLLTASHSGNSPGAIEGDLQQR
Ga0187781_103454961	3300017972	Tropical Peatland	TGLLTLAVLTAQVASSFVAQGPSRTQPAPQDEAAGREVTLAQLDQRLARIEQLLTTSRPGNPPAAADGD
Ga0187777_108649181	3300017974	Tropical Peatland	RITACFIMGTGLLTLAVVTAQVASGFVAQGPSRARPAPQDEAAQREVTLAELDQRLARIEQLLTAPRPGNSPGTTNRD
Ga0187823_100925331	3300017993	Freshwater Sediment	ACVIMGTGLLTLAVVTAQVSSSFVAQGPSRAGPAPQDDESARREVTLAELDQRLARIERLLTTAFPGNSSGAIDGD
Ga0187767_100824701	3300017999	Tropical Peatland	VITAQVASSFVAQSPSRARPAPQDEAARREVTLAELDERLARIEGLLTGSNPGNSPGAIEGD
Ga0187810_105296321	3300018012	Freshwater Sediment	TACFIMGTGLLTLAVVTAQVASSFVGQGSGRDMPASQDETPGREVTLAELGQRLARIERLLTASHPGDSPGVIDGD
Ga0187765_106753612	3300018060	Tropical Peatland	FVAQGSGRTAPAPPDEAARPQDEPIRPEVTLAELDQRLARIERLLTAARPGNAPGAVEGD
Ga0187769_111245861	3300018086	Tropical Peatland	ACFIMGTGLLTLAVVTAQVASSFVAQGPSRARPEPQDEAAREVTLAELDQRLARIERLLTASRPGNPPGAIEGDRRHQ
Ga0187774_103803901	3300018089	Tropical Peatland	IMGTGLLTLAVVTAQVASSFVAQGPSRARPAPQDEAARREVTLAELDQRLARIEHLLTAAQPGNSPGASDGD
Ga0210399_101047234	3300020581	Soil	GLLTLAVITAQVASSFVAQGSGRARPAPPDEAARREVTLADLDQRLARIERLLTAPHPGNSPGAINGD
Ga0210399_108526232	3300020581	Soil	YPVTTWGRITACFIMGTGLLTLAVVTAQVASSFVAQASSRAKPAPPDEAARREVTLAELDERLDRIERLLAAIHPGSSPGAIDSG
Ga0210405_113305441	3300021171	Soil	WGRITACFIMGTGLLTLAVVTAQVASSFVTQAPSRATPAPPDEAARREVTLTELDERLARIERLLTAIHPGSSPGAIDSD
Ga0210408_105388661	3300021178	Soil	GRITACFIMGTGLLTLAVVTAQVASSFVTQAPSRARPAPPDEAARREVTLAELDERLARIEQLLTAVHPGSSPGAIDSH
Ga0210388_102675462	3300021181	Soil	MWGRITACFIMGTGQLTLAVVTAQVASSFVTQAPSRGRPAPPDEAARREVTLAELDERLARIEQLLTAIHPGSSPGAIDSA
Ga0210397_108184442	3300021403	Soil	VTTWGRITACFIMGTGLLTLAVVTAQVASSFVAQASSRAKAAPPDEAARREVTLAELDERLDRIERLLAAIHPGSSPGAIDSG
Ga0210383_104315402	3300021407	Soil	YPVTTWGRITACFIMGTGLLTLAVVTAQVASSFVAQASSRAKAAPPDEAARREVTLTELDERLDRIERLLAAIHPGSSPGAIDSG
Ga0210384_102722581	3300021432	Soil	FYPVTAGGRVTACFIMGTGLLTLAVVTAQVASSFVAQGPSRTGPAPQDEAARREVTLAELDQRLARIEQLLTAAHPGKSPGAIDGD
Ga0210409_104198171	3300021559	Soil	YPVTTWGRITACFIMGTGLLTLAVVTAQVASSFVTQAPSRARPAPPDEAARREVTLAELDERLARIEQLLTAVHPGSSPGAIDSH
Ga0210409_109969701	3300021559	Soil	FIMGTGLLTLAVVTAQVASSFVAQASSRAKAAPPDEAARREVTLAELDERLDRIERLLAAIHPGSSPGAIDSG
Ga0126371_106684583	3300021560	Tropical Forest Soil	IMGTGLLTLAVVTAQVASSFVAQGSSRTRTAPPGEAARREVTLAELDQRLARIEQLLTAARPGSSPGPIDGD
Ga0126371_124285903	3300021560	Tropical Forest Soil	AVVTAQVASSFVAQGTRRATPAPQDEPAQHEVTLAELDQRLARIERLLTATHPGSSTGAIEGN
Ga0207700_101362124	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	CVIMSTGLLTLAVVTAQVASSFVAQGPSRARSAREDEAARPEVTLEELDQRLARIEQLLTAAHPKGSPGAPDGE
Ga0207700_117898462	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PVTTWGRITACFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPPDEAVRREVSLAELDERLDRIERLLAAIHPGSSPGAIDSG
Ga0207806_10249771	3300027049	Tropical Forest Soil	YPVTTWGRITACFIMGTGLVTLAVVTAQVASSFVAQGPGRATPAPQDEAASREVTLTGLDQRLDRIERLLTATPPGNSPGAIEGD
Ga0209380_101380731	3300027889	Soil	CFIMGTGLLTLAVVTAQVASSFVTQAPSRARPAPPDEAARREVTLAELDERLARIEQLLTAVHPGSSPGAIDSG
Ga0209380_107045301	3300027889	Soil	WGRITACFIMGTGLLTLAVVTAQVASSFVTQAPSRARPAPPGEAARREVTLAELDERLARIERLLTAIHPGSSPGAIDSD
Ga0318534_107191541	3300031544	Soil	VTTWGRLTACFIMGTGLLTLAVVTAQVSSSFVAQGPSRARPAPQDEPARHEITLAELDQRLARIERLLTPTHPGNSPDVIEGD
Ga0318538_103862501	3300031546	Soil	MATGLLTLAVVTAQVASSFVAQGPRRATPAPQDEAASRDVTLTELDQRLDRIERLLTAAHPGNSPGTTEGD
Ga0318571_100122641	3300031549	Soil	TLGGRITACVIMGTGLLTLAVITAQVASSFVAQAPRRVRQARSEEAARRDVTLAELDQRLARIERLLTASQPESQAGGTGSD
Ga0318571_100224691	3300031549	Soil	ACFIMGTGLLTLAVVTAQVASSFVAQGPSRARPARPDKPVRREVTLAELDQRLARIEHLLTAAHPGNSPGAIDD
Ga0318573_102261392	3300031564	Soil	MGTGLLTLAVVTAQVASSFVAQGPSRATPAPQDEAAGREVTLAELGQRLARIEQLLTAAHPGNSPGAIEGA
Ga0318515_105950971	3300031572	Soil	VITAQVASSFVGQDSSRAKPAPQEEPAGHEVTMAELDQRLARIERLLTASNTGRSPGAIGGD
Ga0310915_106785162	3300031573	Soil	LLTLAVVTAQVASSFVGQGPGRARPAPPEEAVRREVTLAELDERLARIERLLTAANPGNSPGAP
Ga0318561_102016701	3300031679	Soil	TGGRITACFVMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASREATLAGLDQRLARIERLLTATHPGNSPSAIEGD
Ga0318560_101024682	3300031682	Soil	CFVMATGLLTLAVVTAQVASSFVAQSPGRPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD
Ga0318496_104003761	3300031713	Soil	TTWGRITACFVMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASRDVTLTELDQRLDRIERLLTAAHPGNSPGATEGD
Ga0318493_100241011	3300031723	Soil	TLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLAQIERLLTASHPGNSPGSIKGD
Ga0318493_104607461	3300031723	Soil	TLAVVTAQVASSFVAQGPGRATPAPQDEAASREVTLAGLGQRLDRIERLLTATHPGNSPGAIESE
Ga0318500_100064801	3300031724	Soil	GTGLLTLAVITAQVASSFVAQAPRRVRQARPEEAARREVTLAELDRLARIERLLTASQPESQAGGTGSD
Ga0318500_107410222	3300031724	Soil	VTAQVASSFVAQGPSRARSAREDEAARREVTLAELDQRLARIENLLTTAQPGNSPGTDPP
Ga0318501_104114773	3300031736	Soil	GTGLLTLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLARIERLLTASHPGS
Ga0318501_108034671	3300031736	Soil	FYPVTTWGRLTACFIMGTGLLTLAVVTAQVSSSFVAQGPSRARPAPQDEPARHEITLAELDQRLARIERLLTPTHPGNSPDVIEGD
Ga0318494_104416571	3300031751	Soil	IMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASRDVTLTELDQRLDRIERLLTAAHPGNSPGTTEGD
Ga0318494_109024171	3300031751	Soil	IMGTGVLTLAVITAQVASSFVGQDSSQARPAPQDEPAGHEVTMAELDQRLARIERLLTAPHTGTSPGAIDGD
Ga0318554_100721662	3300031765	Soil	GLLTLAVITAQVASSFVAQSPGRPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGGVEGD
Ga0318526_103874441	3300031769	Soil	TIWGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0318521_103072611	3300031770	Soil	IMGTGLLTLAVVTAQVASSFVAQGPSRARSAREDEAARREVTLAELDQRLARIENLLTTAQPGNSPGTDPP
Ga0318566_102766371	3300031779	Soil	RITACFVMATGLLTLAVVTAQVASSFVAQSPGQPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD
Ga0318547_104999843	3300031781	Soil	IMATGLLTLAVVTAQVASSFVTQGPGRATPAPQDEAASREVTLAGLGQRLDRIERLLTATHPGNSPGAIESE
Ga0318547_108510072	3300031781	Soil	FPVTIEGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0318552_105413762	3300031782	Soil	VTIEGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0318548_100873773	3300031793	Soil	VWGRITACFIMATGLLTLAVVTAQVASSFVAQGPSRAAPAPDDEAPSAEAPPAEAPPDEVTLAELDERLARIERLLTAAHPGNSPGAIEGD
Ga0318568_109893051	3300031819	Soil	FYPVTTQGRITACFIMATGLLTLAVVTAQVASSFVAQGPRRATPAPQDEAASREVTLAELDQRLARIERLLTATHPGNSPGAIEGD
Ga0318564_102101733	3300031831	Soil	FTACFIMGTGLLTLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLARIERLLTASHPGS
Ga0318511_104874022	3300031845	Soil	TIEGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0306919_108480251	3300031879	Soil	CFVMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASRDVTLTELDQRLDRIERLLTAAHPGNSPGTTEGD
Ga0318536_101930051	3300031893	Soil	TLGGRITACVIMGTGLLTLAVITAQVASSFVAQAPRRVRQARPEEAARRDVTLAELDQRLARIERLLTASQPESQAGGTGSD
Ga0318520_103364301	3300031897	Soil	VVTAQVASSFVAQGPSRARSAREDEAARREVTLAELDQRLARIENLLTTAQPGNSPGTDP
Ga0306921_100772815	3300031912	Soil	GVLTLAVITAQVASSFVGQDSSQARPAPQDEPAGHEVTMAELDQRLARIERLLTAPHTGTSPGAIDGD
Ga0306921_102335201	3300031912	Soil	VAGRITACFIMGTGLLTLAVVTAQVASSFVAQGPSRAKPAPPGEPAQREVTLAELDERLAQIERLLTASHPGNSPGSIKGD
Ga0306921_118384622	3300031912	Soil	VITAQVASSFVGQDSSQARPAPQDEPAGHEVTMAELDQRLARIERLLTAPHPGTSPGAIDGD
Ga0306921_124050391	3300031912	Soil	TACFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPRDETGRSEVTLAELDQRLARIERLLTAAHPGNSPGAIEGD
Ga0306921_124832801	3300031912	Soil	VTTGGRITACFVMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASSEATLAELGQQLARIERLLTAPHPRNSPGAIEGD
Ga0310912_107011541	3300031941	Soil	FSPVTMWGRITACFIMGTGLVTLAVVTAQVASSFVAQGAGRATPAPQDEAAGREVTLAELDQRLAGIEQLLTATHPGNSPGAIEGA
Ga0310916_113871242	3300031942	Soil	CFIMGTGLLTLAVVTAQVASSFVAQGPSRATPAPQDEAAGREVTLAELGQRLARIEQLLTAAHPGNSPGAIEGA
Ga0310913_109286161	3300031945	Soil	VTLGGRITACVIMGTGLLTLAVITAQVASSFVAQAPRRVRQARSEEAARRDVTLAELDQRLARIERLLTASQPESQAGGTGSD
Ga0310910_108594191	3300031946	Soil	FYPVTTGGRITACFIMATGLLTLAVVTAQVASSFVAQGPGRATPAPQDEAASREATLAGLDQRLARIERLLTATHPGNSPSAIEGD
Ga0306926_105100031	3300031954	Soil	LIMGTGLLTLAVVTAQVASSFVAQGPSRARSAREDEAARREVTLAELDQRLARIENLLTTAQPGNSPGTDPP
Ga0306922_117449351	3300032001	Soil	CFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPPGETGEREVTLAELDQRLARIERLLTASHSGNSPGAIEGDLQQR
Ga0318545_103203172	3300032042	Soil	FIMGTGLLTLAVVTAQVASSFVAQGPGRATPAPQNEAAGREVTLAELGQRLASIERLLTATHPGNSPGAIEGD
Ga0318504_100329093	3300032063	Soil	VTIWGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0318510_102916852	3300032064	Soil	ATGLLTLAVVTAQVASSFVAQGPRRATPAPQDEAASREVTLAELDQRLARIERLLTATHPGNSPGAVEGD
Ga0318514_105494692	3300032066	Soil	VTLAVITAQVASSFVAQAASRAQRDSQLDAVPSEVTLAELDRRLARIEELLIAAAPPSQPTVSPPGN
Ga0318518_102642052	3300032090	Soil	YYPVTIWGRITACFIMATGLLTLAVVTAQVASSFVAQGQSRAAPAPDAEAPPAEAPPDEVTLAELDRRLARIERLLTEGR
Ga0318577_105381972	3300032091	Soil	AQVASSFVAQGPRPATPAPPDEPASHEATLAELGQRLARIERLLTATHPGNPPGATEGD
Ga0307471_1042315901	3300032180	Hardwood Forest Soil	CFIMGTGLLTLAVVTAQVASSFVAQASSRARPAPPEEELRREVTLAELDERLDRIERLLAAVHPGSSPGTIDSG
Ga0306920_1043556621	3300032261	Soil	TGGRITACFIMGTGLLTLAVVTAQVASSFVAQAPSRARPAPRDETGRSEVTLAELDQRLARIERLLTAAHPGNSAGAIEGD
Ga0335081_101732961	3300032892	Soil	FTPVTTWGRITACFIMGTGLLTLAVITAQVASSFAAQGPSRARLAPRDEAAGREVTLAELDQRLARIERLLTAPQPGNSPRAIDGD
Ga0335081_120617701	3300032892	Soil	VTACFIMGTGLLTLAVVTAQVASSFVAQGSSRARPVPPGQAARREVTLAELDLRLARIERLLTPPHPGNSPGATDGD
Ga0335071_108996592	3300032897	Soil	GLLTLAVITAQVASSFVAQGSSRAAPAPPDEAVRPDVTLAELDQRLARIERLLTAAHPPNAAGAAEGD
Ga0335083_101558001	3300032954	Soil	CIMGTGLLTLAVVTAQVASSFVAQGPSRARPAPQDEAARREVTLAELDQRLARIEHLLTAAHPGNSPGASDGD
Ga0335083_104331162	3300032954	Soil	PVTAGGRVTACCIMGTGLLTLAVVTAQVASSFVAQGPSRARPAREDEAARREVTMAGLDQRLARIEHLLTAARPGNAPGVSDGD
Ga0335084_109998941	3300033004	Soil	IMGTGLLTLAVVTAQVASSFVAQGPSRARPAREDEAARREVTMAGLDQRLARIEHLLTAARPGNAPGVSDGD
Ga0335077_100196241	3300033158	Soil	TTGGRITACFIMGTGLLTLAVITAQVASSFVTQGPSQARPAPQDEAARREVTLAELDRRLARIEYLLTAAHPGNSPGATADD
Ga0335077_119880761	3300033158	Soil	LTLAVVTAQVASSFVAQGSGRAAPAPQDEAIRPEVTLAELDQRLARIERLLTAAHPGNAPGAVEGD
Ga0318519_100339971	3300033290	Soil	VITAQVASSFVAQAPRRVRQARSEEAARRDVTLAELDQRLARIERLLTASQPESQAGGTGSD
Ga0318519_105803651	3300033290	Soil	ITACFVMATGLLTLAVVTAQVASSFVAQSPGQPTPAPQDEAASGEVTPAELGERLARIERLLTATHPGNSPGAVEGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082333

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences