Metagenome / Metatranscriptome Family F082421

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	52 residues
Representative Sequence	MDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	92.04 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.062 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.398 % of family members)
Environment Ontology (ENVO)	Unclassified (49.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.85% β-sheet: 0.00% Coil/Unstructured: 48.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00171	Aldedh	10.62
PF04075	F420H2_quin_red	4.42
PF10518	TAT_signal	4.42
PF03401	TctC	1.77
PF12681	Glyoxalase_2	1.77
PF02518	HATPase_c	1.77
PF07883	Cupin_2	0.88
PF04392	ABC_sub_bind	0.88
PF03631	Virul_fac_BrkB	0.88
PF04199	Cyclase	0.88
PF13416	SBP_bac_8	0.88
PF04191	PEMT	0.88
PF00583	Acetyltransf_1	0.88
PF02666	PS_Dcarbxylase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	10.62
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	10.62
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	10.62
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.77
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.88
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.88
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.06 %
Unclassified	root	N/A	38.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.06 %
Unclassified	root	N/A	38.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.06 %
Unclassified	root	N/A	38.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.79 %
Unclassified	root	N/A	38.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.13 %
Unclassified	root	N/A	38.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.24 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.08 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.24 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.19 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10338723	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300004633\|Ga0066395_10960743	Not Available	520	Open in IMG/M
3300005172\|Ga0066683_10816031	Not Available	541	Open in IMG/M
3300005178\|Ga0066688_10340485	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300005186\|Ga0066676_10747394	Not Available	665	Open in IMG/M
3300005332\|Ga0066388_103828209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	768	Open in IMG/M
3300005332\|Ga0066388_106181732	Not Available	604	Open in IMG/M
3300005332\|Ga0066388_107070535	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005340\|Ga0070689_101861792	Not Available	549	Open in IMG/M
3300005363\|Ga0008090_10075505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300005363\|Ga0008090_15701093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1138	Open in IMG/M
3300005555\|Ga0066692_10046538	Not Available	2390	Open in IMG/M
3300005713\|Ga0066905_100846835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300005713\|Ga0066905_100897020	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005764\|Ga0066903_100399018	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300006797\|Ga0066659_10125404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300006854\|Ga0075425_100950447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300006904\|Ga0075424_101697966	Not Available	669	Open in IMG/M
3300006904\|Ga0075424_101970192	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300009162\|Ga0075423_12053410	Not Available	619	Open in IMG/M
3300009553\|Ga0105249_13282071	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300009792\|Ga0126374_10014316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3259	Open in IMG/M
3300009792\|Ga0126374_10287854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1094	Open in IMG/M
3300010043\|Ga0126380_10036799	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300010043\|Ga0126380_10037847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2505	Open in IMG/M
3300010043\|Ga0126380_11396634	Not Available	615	Open in IMG/M
3300010048\|Ga0126373_11274007	Not Available	801	Open in IMG/M
3300010304\|Ga0134088_10071646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300010358\|Ga0126370_10227821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300010358\|Ga0126370_10330361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1223	Open in IMG/M
3300010360\|Ga0126372_10057303	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300010361\|Ga0126378_13034713	Not Available	535	Open in IMG/M
3300010366\|Ga0126379_10265228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300010366\|Ga0126379_11127476	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300010366\|Ga0126379_11370236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	813	Open in IMG/M
3300010366\|Ga0126379_11995181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300010376\|Ga0126381_104444939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300010398\|Ga0126383_11471332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300010398\|Ga0126383_12570276	Not Available	593	Open in IMG/M
3300010863\|Ga0124850_1125056	Not Available	648	Open in IMG/M
3300012200\|Ga0137382_10154937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1555	Open in IMG/M
3300012204\|Ga0137374_10856861	Not Available	670	Open in IMG/M
3300012207\|Ga0137381_10730891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300012210\|Ga0137378_10696811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300012350\|Ga0137372_11094305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	548	Open in IMG/M
3300012355\|Ga0137369_10280382	All Organisms → cellular organisms → Bacteria → Proteobacteria	1246	Open in IMG/M
3300012359\|Ga0137385_11623474	Not Available	510	Open in IMG/M
3300012923\|Ga0137359_10379719	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300012930\|Ga0137407_11672101	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012938\|Ga0162651_100043478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300015359\|Ga0134085_10325583	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300016294\|Ga0182041_10067197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2504	Open in IMG/M
3300016294\|Ga0182041_10225158	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300016341\|Ga0182035_11578686	Not Available	591	Open in IMG/M
3300016387\|Ga0182040_10877849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300017654\|Ga0134069_1336991	Not Available	541	Open in IMG/M
3300017656\|Ga0134112_10445644	Not Available	541	Open in IMG/M
3300021560\|Ga0126371_13525540	Not Available	528	Open in IMG/M
3300026327\|Ga0209266_1262023	Not Available	551	Open in IMG/M
3300026329\|Ga0209375_1224321	Not Available	667	Open in IMG/M
3300026528\|Ga0209378_1149458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300031543\|Ga0318516_10436035	Not Available	754	Open in IMG/M
3300031545\|Ga0318541_10175389	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300031545\|Ga0318541_10296327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031561\|Ga0318528_10298244	Not Available	865	Open in IMG/M
3300031572\|Ga0318515_10423426	Not Available	712	Open in IMG/M
3300031573\|Ga0310915_10456104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908	Open in IMG/M
3300031573\|Ga0310915_10544922	Not Available	823	Open in IMG/M
3300031679\|Ga0318561_10779400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300031680\|Ga0318574_10297082	Not Available	938	Open in IMG/M
3300031681\|Ga0318572_10155361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1323	Open in IMG/M
3300031681\|Ga0318572_10689019	Not Available	608	Open in IMG/M
3300031719\|Ga0306917_10280487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1283	Open in IMG/M
3300031719\|Ga0306917_10314703	Not Available	1211	Open in IMG/M
3300031719\|Ga0306917_10465978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	990	Open in IMG/M
3300031723\|Ga0318493_10417952	Not Available	735	Open in IMG/M
3300031736\|Ga0318501_10214962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1009	Open in IMG/M
3300031744\|Ga0306918_10048893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2797	Open in IMG/M
3300031770\|Ga0318521_10248135	Not Available	1038	Open in IMG/M
3300031771\|Ga0318546_10926649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300031777\|Ga0318543_10243662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300031780\|Ga0318508_1158159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031780\|Ga0318508_1248337	Not Available	511	Open in IMG/M
3300031821\|Ga0318567_10552608	Not Available	654	Open in IMG/M
3300031832\|Ga0318499_10026016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2078	Open in IMG/M
3300031845\|Ga0318511_10375932	Not Available	649	Open in IMG/M
3300031845\|Ga0318511_10557777	Not Available	532	Open in IMG/M
3300031860\|Ga0318495_10077155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1488	Open in IMG/M
3300031879\|Ga0306919_10713761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300031890\|Ga0306925_10554213	Not Available	1218	Open in IMG/M
3300031890\|Ga0306925_10838922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300031897\|Ga0318520_10102304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1609	Open in IMG/M
3300031910\|Ga0306923_10581808	Not Available	1259	Open in IMG/M
3300031912\|Ga0306921_11644117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300031942\|Ga0310916_11041599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300031945\|Ga0310913_10382920	Not Available	997	Open in IMG/M
3300031946\|Ga0310910_10981828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300031947\|Ga0310909_11492960	Not Available	538	Open in IMG/M
3300031954\|Ga0306926_10445549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1595	Open in IMG/M
3300031954\|Ga0306926_10486705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1517	Open in IMG/M
3300031959\|Ga0318530_10186609	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300032025\|Ga0318507_10424239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300032042\|Ga0318545_10227835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300032044\|Ga0318558_10523111	Not Available	592	Open in IMG/M
3300032051\|Ga0318532_10099277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1026	Open in IMG/M
3300032051\|Ga0318532_10184832	Not Available	740	Open in IMG/M
3300032052\|Ga0318506_10146222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300032054\|Ga0318570_10193642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300032066\|Ga0318514_10283606	Not Available	874	Open in IMG/M
3300032066\|Ga0318514_10481529	Not Available	660	Open in IMG/M
3300032068\|Ga0318553_10739901	Not Available	514	Open in IMG/M
3300032076\|Ga0306924_11338027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300032091\|Ga0318577_10638460	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.58%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.84%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.54%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_103387232	3300004633	Tropical Forest Soil	GAYNQYASGFSYCHDEFSEDEKYLAYQTGAITGFGNHYKNRTWLMKMK*
Ga0066395_109607431	3300004633	Tropical Forest Soil	MEYYLIYMDARSLPCNNSAMDKLLGAYNQYASGFSYCHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0066683_108160312	3300005172	Soil	VYMDARSLPCNDTAMDKLVGAYNQYASGFSYCHSEFSEDETFRAYQIGAMTGFGNHYENRTWLEKMK*
Ga0066688_103404853	3300005178	Soil	NARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDEAFRAYQIGAMTGFGNHYKNRTWLQKMK*
Ga0066676_107473941	3300005186	Soil	GAYNQYASGFSYCHSEFSEDETFRAYQVRAMTGFGNHYENRTWLQKMK*
Ga0066388_1038282092	3300005332	Tropical Forest Soil	YASGFSSCHDEFSEDEAFRSYQTGAMTGFGNHYKNRTWLLK*
Ga0066388_1061817321	3300005332	Tropical Forest Soil	PCNNSAMDKLLGAYNQYASGFSSCHDEFSEDETFRTYQIAAMTGFGNHYKNRTWLRKMK*
Ga0066388_1070705352	3300005332	Tropical Forest Soil	SGFSYCHDGFSEDETFRSYQTRAMTGFSDHYNNRTWLQKMK*
Ga0070689_1018617922	3300005340	Switchgrass Rhizosphere	NDTAMDKLVGAYNQYASGFSYCHSEFSEDETFRAYQIGAMTGFGNHYENRTWLEKMK*
Ga0008090_100755051	3300005363	Tropical Rainforest Soil	FSSCHDGFSEDETYRTYQIGAMTGFGNHYKNRTWLRTMK*
Ga0008090_157010933	3300005363	Tropical Rainforest Soil	AMDKLVGAYNQYASGFSSCHDEFSQDETYRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0066692_100465381	3300005555	Soil	MEYYLVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYENRTWLKKMK*
Ga0066905_1008468351	3300005713	Tropical Forest Soil	AMDKLLGAYNQYASGFSYCHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0066905_1008970201	3300005713	Tropical Forest Soil	MDARSLPCNNSVMDKLLGAYNQYASGFSYCHDEFSEDEKYLAYQTGAITGFGNHYKNRTWLMKMK*
Ga0066903_1003990181	3300005764	Tropical Forest Soil	AMDKLVGAYNQYASGFSYCHDGFSEDETFRSYQTRAMTGFGDHYNNRTWLQKMK*
Ga0066659_101254041	3300006797	Soil	PCNDSALDKLLGAYNQYASGFGYCHDEFSEDEKYRAYQIAAMTGFGDHYKNRTWLSKMK*
Ga0075425_1009504473	3300006854	Populus Rhizosphere	MDKLVGAYNQYASGFSYCHGEFSEDETFRAYQIGAMTGFGNHYENRTWLEKMK*
Ga0075424_1016979663	3300006904	Populus Rhizosphere	GFSYCHGEFSEDETFRAYQIRAMTGFGNHYENRTWLEKMK*
Ga0075424_1019701922	3300006904	Populus Rhizosphere	QYASGFSYCHDEFSEDETFRTYQIRAMTGFGNHYRNRTWLKEMK*
Ga0075423_120534101	3300009162	Populus Rhizosphere	FMEYYLVYMDARSLPCNDTAMDKLVGAYNQYASGFSYCHSEFSEDETFRAYQIGAMTGFGNHYENRTWLEKMK*
Ga0105249_132820711	3300009553	Switchgrass Rhizosphere	VGAYNQYASGFSYCHGEFSEDETFRAYQVRAMTGFGNHYENRTWLQKMK*
Ga0126374_100143166	3300009792	Tropical Forest Soil	MDKLLGAYNQYASGFSYCHDEFSEDEKYRAYQTGAITGFGNHYKNRTWLMEMK*
Ga0126374_102878541	3300009792	Tropical Forest Soil	YASGFSACHDEFSQDETYRTYQIGAMTGFGNHYKNRTWLRTMK*
Ga0126380_100367996	3300010043	Tropical Forest Soil	AMDKLIGAYNQYASGFSSCHDEFSEDETFRTYQIGAMTGFGNHYNNRTWLRKMK*
Ga0126380_100378471	3300010043	Tropical Forest Soil	AMDKLIGAYNQYASGFSYCHDEFSEDETFRTYQNRAMTGFGDHYENRTWLEKMK*
Ga0126380_113966341	3300010043	Tropical Forest Soil	NQYASGFSHCRHEFSEDETYRTYQIGAMTGFGSHYKNRTWLRKMK*
Ga0126373_112740071	3300010048	Tropical Forest Soil	MDKLVGAYNQYSSGFSYCHDEFSADETYRTYQIRAMTGFGNHYKNRTWLRKMK*
Ga0134088_100716461	3300010304	Grasslands Soil	VKRREFIALLGAYNQYASGFSHCHDEFSEDEKYRTYQVGAITGFGKHYKNRTWLIKMK*
Ga0126370_102278213	3300010358	Tropical Forest Soil	AMDKLLGAYNQYASGFSYCHDEFSEDETFRAYQIGAMTGFGNHCKNRTWLRKMK*
Ga0126370_103303611	3300010358	Tropical Forest Soil	YCHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0126372_100573032	3300010360	Tropical Forest Soil	MDKLLGAYNQYASGFSYCHDEFSEDEKYRAYQTGAITGFGNHYKNRTWLMKMK*
Ga0126378_130347131	3300010361	Tropical Forest Soil	TAMDKLIGAYNQYASGFSSCHDEFSEDETYRSYQIGAMTGFGNHYKTHTWLMKMK*
Ga0126379_102652284	3300010366	Tropical Forest Soil	MGVNQFSYCHDEFSEDEKYLAYQTGAITGFGNHYKNRTWLMKMK*
Ga0126379_111274763	3300010366	Tropical Forest Soil	CHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0126379_113702363	3300010366	Tropical Forest Soil	MDKLVGAYNQYASGFSSCHDEFSQDETYRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0126379_119951812	3300010366	Tropical Forest Soil	SGFSYCHDGFSEDETFRAYQIRAITGFGNHYNNGTWLRKMK*
Ga0126381_1044449391	3300010376	Tropical Forest Soil	SYCHGEFSEDETYRAYQIGAITGFGNHYKTRTWLQKMK*
Ga0126383_114713321	3300010398	Tropical Forest Soil	SGFSYCHDGFSEDETFRAYQNRAMTGFGDHYKNRTWLRKMK*
Ga0126383_125702761	3300010398	Tropical Forest Soil	IYMDARSLPCNNSAMDKLLGAYNQYASGFSYCHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0124850_11250562	3300010863	Tropical Forest Soil	MDKLLGAYNQYSSGFSYCNDEFSDDETYRTYQIGAMTGFGNHYKNRTWLRKMK*
Ga0137382_101549371	3300012200	Vadose Zone Soil	LLGAYNQYSSGFGYCHDEFSEDEKYRAYQIGAMTGFGNHYKHRTWLIKMK*
Ga0137374_108568611	3300012204	Vadose Zone Soil	SYCHDEISEDEKYRAYQIGAMTGFGNHYKNRTWLIKMK*
Ga0137381_107308913	3300012207	Vadose Zone Soil	VGAYNQYASGFSYCHGEFSEDETFRGYQVRAMTGFGNHYENRTWLKKMK*
Ga0137378_106968111	3300012210	Vadose Zone Soil	LVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYENRTWLKKMK*
Ga0137372_110943051	3300012350	Vadose Zone Soil	LGAYNQYSSGFSYCHDEISEDEKYRAYQIGAMTGFGNHYKNRTWLIKMK*
Ga0137369_102803821	3300012355	Vadose Zone Soil	RSLPCNDSALDKLLGAYNQYSSGFSYCYNEFSEDETYRTYQIGAITGFGNHYKNRTWLIKMK*
Ga0137385_116234742	3300012359	Vadose Zone Soil	GFSSCHDEFSEDETFRAYQVRAMTGFGNHYENRTWLEKMK*
Ga0137359_103797193	3300012923	Vadose Zone Soil	YMNARSLPCSDTAMDKLVGAYNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYENRTWLKEMK*
Ga0137407_116721012	3300012930	Vadose Zone Soil	SGYSYCHDEFSDDEKYRTYQIGAITGFGNHYRNRTWLMKMK*
Ga0162651_1000434781	3300012938	Soil	MNDSAMDKLLGAYNQYSSGFSYCHDEFSENEKYRTYQIDAMNGFGNHYKNRTRLIKMK*
Ga0134085_103255831	3300015359	Grasslands Soil	SSCHDEFSEDETFRAYQVRAMTGFGNHYENRTWLQKMK*
Ga0182041_100671975	3300016294	Soil	FSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0182041_102251581	3300016294	Soil	SLPCNNSAMDKLVGAYNQYASGFSSCHDQFSADETYRAYQIGAMTGFGNHYKNRTWLRTM
Ga0182035_115786861	3300016341	Soil	CNDTAMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0182040_108778491	3300016387	Soil	AMDKLVGAYNQYASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0134069_13369912	3300017654	Grasslands Soil	GARSLPCNDGAMDKLVGAYNQYASGFSSCHDEFSEDETFRAYQIGAMTGFGNHYENRTWLQKMK
Ga0134112_104456442	3300017656	Grasslands Soil	YCHDEFSEDEKYRTYQIGATTGFGKHYKNRTWLIKMK
Ga0126371_135255401	3300021560	Tropical Forest Soil	CHDEFSEDETFRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0209266_12620232	3300026327	Soil	YYLVYMDARSLPCNDTAMDKLVGAYNQYASGFSYCHSEFSEDETFRAYQIGAMTGFGNHYENRTWLEKMK
Ga0209375_12243211	3300026329	Soil	LPCNDSAMDKLLGAYNQYASGFSHCHDEFSEDEKYRTYQVGAITGFGKHYKNRTWLIKMK
Ga0209378_11494581	3300026528	Soil	MDKLVGAYNQYASGFSSCHDEFSEDETFRAYQVRAMTGFGNHYENRTWLQKMK
Ga0318516_104360352	3300031543	Soil	CNDSAMDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0318541_101753891	3300031545	Soil	MEYYLIYMDARSLPCNHSAMDKLVGAYNQYASGFSYCNDQFSEDETFRTYQIGAMTGFGNHYKKRTWLKKMK
Ga0318541_102963272	3300031545	Soil	SGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLSKMK
Ga0318528_102982441	3300031561	Soil	AMDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0318515_104234263	3300031572	Soil	IYMDARSLPCNHSAMDKLVGAYNQYASGFSYCNDQFSEDETFRTYQIGAMTGFGNHYKKRTWLKKMK
Ga0310915_104561041	3300031573	Soil	PCNDTAMDKLVGAYNQYASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0310915_105449221	3300031573	Soil	AYNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318561_107794001	3300031679	Soil	NQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLSKMK
Ga0318574_102970822	3300031680	Soil	GFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318572_101553612	3300031681	Soil	YMHARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYQNRTWLQKMK
Ga0318572_106890192	3300031681	Soil	AMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0306917_102804871	3300031719	Soil	LIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0306917_103147031	3300031719	Soil	SAMDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0306917_104659783	3300031719	Soil	VGAYNQYASGFSSCHDQFSADETYRAYQIGAMTGFGNHYKNRTWLRTMK
Ga0318493_104179521	3300031723	Soil	PCNDTAMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318501_102149621	3300031736	Soil	CNNSAMDKLVGAYNQYASGFSSCHDQFSADETYRAYQIGAMTGFGNHYKNRTWLRTMK
Ga0306918_100488931	3300031744	Soil	GAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0318521_102481351	3300031770	Soil	CNDTAMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318546_109266492	3300031771	Soil	LVYMDARSLPCNDSAMDKLVGAYNQYASGFSYCHGEFSEDETYRAYQIGAMTGFGNHYKTRTWLQKMK
Ga0318543_102436621	3300031777	Soil	CNDTAMDKLVGAYNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYQNRTWLQKMK
Ga0318508_11581592	3300031780	Soil	QYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYQNRTWLQKMK
Ga0318508_12483371	3300031780	Soil	YASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318567_105526081	3300031821	Soil	DKLVGAYNQYASGFSYCNDQFSEDETFRTYQIGAMTGFGNHYKKRTWLKKMK
Ga0318499_100260164	3300031832	Soil	YNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGDHYKTRTWLRKMK
Ga0318511_103759322	3300031845	Soil	HSAMDKLVGAYNQYASGFSYCNDQFSEDETFRTYQIGAMTGFGNHYKKRTWLKKMK
Ga0318511_105577772	3300031845	Soil	LVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0318495_100771551	3300031860	Soil	CNDSAMDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGDHYKTRTWLRKMK
Ga0306919_107137611	3300031879	Soil	YYLVYMDARSLPCNDSAMDKLVGAYNQYASGFSYCHGEFSEDETYRAYQIGAMTGFGNHYKTRTWLQKMK
Ga0306925_105542131	3300031890	Soil	MDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0306925_108389223	3300031890	Soil	YLVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0318520_101023041	3300031897	Soil	DKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLSKMK
Ga0306923_105818081	3300031910	Soil	KLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0306921_116441171	3300031912	Soil	TAMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0310916_110415991	3300031942	Soil	LIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0310913_103829202	3300031945	Soil	NQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0310910_109818282	3300031946	Soil	YASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0310909_114929602	3300031947	Soil	NDTAMDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0306926_104455493	3300031954	Soil	YYLVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0306926_104867053	3300031954	Soil	SGAMDKLIGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0318530_101866091	3300031959	Soil	RSRPCNDGAMDKLLGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGDHYKTRTWLRKMK
Ga0318507_104242391	3300032025	Soil	YYLVYMNARSLPCNDTAMDKLVGAYNQYASGFSYCHGEFSEDETYRAYQIGAMTGFGNHYKTRTWLQKMK
Ga0318545_102278352	3300032042	Soil	YNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0318558_105231111	3300032044	Soil	YCHDEFSGDEAYRGYQIGAITGFGNHYKNRTWLRKMK
Ga0318532_100992773	3300032051	Soil	YNQYASGFSYCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318532_101848321	3300032051	Soil	CNHSAMDKLVGAYNQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0318506_101462222	3300032052	Soil	SYCHGEFSEDETFRTYQIGAMTGFGNHYQNRTWLQKMK
Ga0318570_101936421	3300032054	Soil	YNQYASGFSYCHGEFSEDETFRTYQIGAMTGFGNHYQNRTWLQKMK
Ga0318514_102836061	3300032066	Soil	YCHDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK
Ga0318514_104815292	3300032066	Soil	ASGFSYCHGEFSEDEAFRTYQIGAMTGFGNHYENRTWLKKMK
Ga0318553_107399011	3300032068	Soil	NQYASGFSSCHDEFSEDETYRTYQIGAMTGFGNHYKNRTWLRKMK
Ga0306924_113380271	3300032076	Soil	MDKLIGAYNQYASGFSYCHDEFSGDEAYRSYQIGAITGFGNHYKNRTWLRKMK
Ga0318577_106384602	3300032091	Soil	HDEFSGDEAYRSYQIGAMTGFGNHYKNRTWLRKMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences