Metagenome / Metatranscriptome Family F082432

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082432
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	91 residues
Representative Sequence	RAAERRAVRVIVDNENGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Number of Associated Samples	89
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.04 %
% of genes near scaffold ends (potentially truncated)	84.07 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.407 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.664 % of family members)
Environment Ontology (ENVO)	Unclassified (31.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.752 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.41% β-sheet: 0.00% Coil/Unstructured: 43.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00313	CSD	22.12
PF00072	Response_reg	6.19
PF01925	TauE	2.65
PF00805	Pentapeptide	1.77
PF13551	HTH_29	0.88
PF02617	ClpS	0.88
PF13410	GST_C_2	0.88
PF03069	FmdA_AmdA	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.65
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.77
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
All Organisms	root	All Organisms	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
cellular organisms	root	All Organisms → cellular organisms	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.81 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.81 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.88 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.81 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.88 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01CLJ1D	Not Available	500	Open in IMG/M
3300004152\|Ga0062386_100216026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1512	Open in IMG/M
3300005174\|Ga0066680_10538537	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300005175\|Ga0066673_10581438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300005187\|Ga0066675_10930645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300005439\|Ga0070711_100604809	Not Available	915	Open in IMG/M
3300005447\|Ga0066689_11038693	Not Available	504	Open in IMG/M
3300005454\|Ga0066687_10670284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300005555\|Ga0066692_10799866	Not Available	580	Open in IMG/M
3300005559\|Ga0066700_10578210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300005559\|Ga0066700_10882120	Not Available	596	Open in IMG/M
3300005576\|Ga0066708_10512632	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005586\|Ga0066691_10350468	Not Available	874	Open in IMG/M
3300006796\|Ga0066665_10742696	Not Available	776	Open in IMG/M
3300006797\|Ga0066659_10788547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300006800\|Ga0066660_10771573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300009088\|Ga0099830_10633591	Not Available	878	Open in IMG/M
3300010048\|Ga0126373_10485024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1276	Open in IMG/M
3300010048\|Ga0126373_12073871	Not Available	631	Open in IMG/M
3300010048\|Ga0126373_13308377	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010360\|Ga0126372_11826922	Not Available	651	Open in IMG/M
3300010360\|Ga0126372_12240795	Not Available	596	Open in IMG/M
3300010361\|Ga0126378_10146271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2400	Open in IMG/M
3300010361\|Ga0126378_10991434	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010361\|Ga0126378_11353022	Not Available	806	Open in IMG/M
3300010361\|Ga0126378_11658361	Not Available	726	Open in IMG/M
3300010366\|Ga0126379_11877006	Not Available	703	Open in IMG/M
3300010376\|Ga0126381_103145605	Not Available	653	Open in IMG/M
3300010376\|Ga0126381_103434511	Not Available	623	Open in IMG/M
3300010398\|Ga0126383_10187285	Not Available	1974	Open in IMG/M
3300011269\|Ga0137392_11388364	Not Available	561	Open in IMG/M
3300011271\|Ga0137393_10404949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300012189\|Ga0137388_11767974	Not Available	551	Open in IMG/M
3300012200\|Ga0137382_11162357	Not Available	549	Open in IMG/M
3300012201\|Ga0137365_11317393	Not Available	512	Open in IMG/M
3300012202\|Ga0137363_10247072	Not Available	1449	Open in IMG/M
3300012202\|Ga0137363_10520146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300012210\|Ga0137378_10444326	Not Available	1201	Open in IMG/M
3300012210\|Ga0137378_11010757	Not Available	745	Open in IMG/M
3300012211\|Ga0137377_11412833	Not Available	624	Open in IMG/M
3300012285\|Ga0137370_10160362	Not Available	1305	Open in IMG/M
3300012361\|Ga0137360_10993547	Not Available	724	Open in IMG/M
3300012917\|Ga0137395_10367773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300012918\|Ga0137396_10363465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300012922\|Ga0137394_11395256	Not Available	561	Open in IMG/M
3300012922\|Ga0137394_11561851	Not Available	517	Open in IMG/M
3300012923\|Ga0137359_10109310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2444	Open in IMG/M
3300012923\|Ga0137359_11018661	Not Available	710	Open in IMG/M
3300012923\|Ga0137359_11445114	Not Available	576	Open in IMG/M
3300012924\|Ga0137413_10716743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300012929\|Ga0137404_12108528	Not Available	527	Open in IMG/M
3300012957\|Ga0164303_10545961	Not Available	752	Open in IMG/M
3300012971\|Ga0126369_12343937	Not Available	620	Open in IMG/M
3300012971\|Ga0126369_12568638	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300015264\|Ga0137403_10959184	Not Available	703	Open in IMG/M
3300016270\|Ga0182036_10166642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1584	Open in IMG/M
3300016294\|Ga0182041_10521296	Not Available	1034	Open in IMG/M
3300016319\|Ga0182033_10197928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1596	Open in IMG/M
3300016341\|Ga0182035_10368442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300016371\|Ga0182034_10839512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300016445\|Ga0182038_10598215	Not Available	952	Open in IMG/M
3300020170\|Ga0179594_10256243	Not Available	660	Open in IMG/M
3300020579\|Ga0210407_10253711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1370	Open in IMG/M
3300020579\|Ga0210407_10797235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300020580\|Ga0210403_10308952	Not Available	1295	Open in IMG/M
3300020580\|Ga0210403_10352167	Not Available	1204	Open in IMG/M
3300020581\|Ga0210399_10090224	Not Available	2496	Open in IMG/M
3300020581\|Ga0210399_10484938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300020581\|Ga0210399_11041989	Not Available	657	Open in IMG/M
3300020583\|Ga0210401_11321951	Not Available	579	Open in IMG/M
3300021404\|Ga0210389_11006078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300021432\|Ga0210384_11022628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300021475\|Ga0210392_10695633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300021478\|Ga0210402_10483835	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300021478\|Ga0210402_11425385	Not Available	620	Open in IMG/M
3300021560\|Ga0126371_12405562	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_12580200	Not Available	615	Open in IMG/M
3300025906\|Ga0207699_10574416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300026374\|Ga0257146_1059632	Not Available	618	Open in IMG/M
3300026550\|Ga0209474_10398025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	721	Open in IMG/M
3300027651\|Ga0209217_1167611	Not Available	602	Open in IMG/M
3300027655\|Ga0209388_1208502	Not Available	539	Open in IMG/M
3300027727\|Ga0209328_10102758	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300027903\|Ga0209488_10066321	Not Available	2673	Open in IMG/M
3300027903\|Ga0209488_11103854	Not Available	541	Open in IMG/M
3300027903\|Ga0209488_11140668	Not Available	529	Open in IMG/M
3300028536\|Ga0137415_10089555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2934	Open in IMG/M
3300028906\|Ga0308309_10347648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300029636\|Ga0222749_10233960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300031057\|Ga0170834_104408876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300031231\|Ga0170824_100998277	Not Available	532	Open in IMG/M
3300031474\|Ga0170818_110297182	Not Available	617	Open in IMG/M
3300031545\|Ga0318541_10171542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300031546\|Ga0318538_10156085	Not Available	1208	Open in IMG/M
3300031668\|Ga0318542_10117897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300031719\|Ga0306917_11327435	Not Available	556	Open in IMG/M
3300031753\|Ga0307477_10194552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1411	Open in IMG/M
3300031753\|Ga0307477_10978930	Not Available	556	Open in IMG/M
3300031792\|Ga0318529_10325471	Not Available	716	Open in IMG/M
3300031795\|Ga0318557_10053197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300031890\|Ga0306925_11579094	Not Available	639	Open in IMG/M
3300031893\|Ga0318536_10586155	Not Available	558	Open in IMG/M
3300031910\|Ga0306923_11719861	Not Available	647	Open in IMG/M
3300031912\|Ga0306921_11713596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300031942\|Ga0310916_10450973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300031945\|Ga0310913_11009684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300032001\|Ga0306922_11608349	Not Available	646	Open in IMG/M
3300032035\|Ga0310911_10687294	Not Available	593	Open in IMG/M
3300032066\|Ga0318514_10772214	Not Available	511	Open in IMG/M
3300032180\|Ga0307471_101656491	Not Available	795	Open in IMG/M
3300032205\|Ga0307472_100930243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300032205\|Ga0307472_102195623	Not Available	557	Open in IMG/M
3300033289\|Ga0310914_10002042	All Organisms → cellular organisms → Bacteria	13414	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.11%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.11%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.81%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_6731820	2032320005	Soil	MIGSPEIFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLCGNSVTDTPPPT
Ga0062386_1002160262	3300004152	Bog Forest Soil	LRRAAERRAVQVLVDNENGMIGDPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGADDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066680_105385371	3300005174	Soil	RSAERRAVRAIVDNDNGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMQVVELVANTWLTKDDRLAVEQLLSEQRY*
Ga0066673_105814381	3300005175	Soil	AECSAVQVIVENKKGMIGSPGIFVPRQYRQHADDELRALEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066675_109306451	3300005187	Soil	LRRAAERRALQVIVENKKGMIGSPGIFVPRQYRQHADDELRALEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0070711_1006048091	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RAVQVIVDNEKGMIGSPGIFVPRQYRQHAEDELRAQEVFDIAMRHLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQPY*
Ga0066689_110386931	3300005447	Soil	VRVLVRNENGMIGSPGVFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQGY*
Ga0066687_106702841	3300005454	Soil	ENENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVAHTWLTKHDRQAVEQLLSEQRY*
Ga0066692_107998662	3300005555	Soil	VRVIVDSENEIIGSPGFFIPRQYRQGAEDELRAQEVYDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066700_105782102	3300005559	Soil	RAAERRAVRVIVDNENGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066700_108821201	3300005559	Soil	RRAVRVIVDNEGGMIGSPGIFVPRQNRQDAEDELRAREVFDIAMRRLGTDDRDAFFMRVVELVASTWLTKDDRQAIEQLLSEQHYI*
Ga0066708_105126322	3300005576	Soil	PQSDGRRRRSGRSEEELRRAAERRAVRVIVDNNNGMIGSPGIFVPRQYRQTAEDELRAQEVFDIAMRRQGTDDRDAFFMRVVELVANIWLTKDDRQAVEQLLSEQGY*
Ga0066691_103504682	3300005586	Soil	VIVDSENGIIGSPGFFIPRQYRQGAEDELRAQEVFDIAMGRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066665_107426962	3300006796	Soil	YPQSDGRRRRSRRSKEGLRRAAGLRAVRMIVDNENGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFTQVVELVANTWLTEDDRQAVEQLLSEQGYI*
Ga0066659_107885472	3300006797	Soil	QAAERRAVRVIVDSENGIIGSPGIFIPRQYRQGAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0066660_107715731	3300006800	Soil	RSEIRQAAERRAVRVLVRNENGMIGSPGVFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRLAVEQLLSEQRY*
Ga0099830_106335912	3300009088	Vadose Zone Soil	YPQSDGRHRPSNRSEIRQAAERRAVRVIVGNENGMIGSPGVFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRLAVEQLLSEQRY*
Ga0126373_104850243	3300010048	Tropical Forest Soil	MRLILGNHSGMIGNPGIFVPRQYRQNAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAVEQILSE*
Ga0126373_120738712	3300010048	Tropical Forest Soil	AAERRALRVIAENEYGMIGDPGIFIPRQYRQHAEDELRAHEVFEIAMSRLGTDDRDTFFMRVVQLVANTWLTKDDRQAVEQLLSEQRYFGRAQP*
Ga0126373_133083771	3300010048	Tropical Forest Soil	RVILENENGMIGDPGIFIPRQYRQHAEDEVRAQEVFEIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVDQLLSEQRYLDPAQP*
Ga0126372_118269222	3300010360	Tropical Forest Soil	MRLILGNHSGMIGNPGIFVPRQYRQNAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVAKTWLTK
Ga0126372_122407951	3300010360	Tropical Forest Soil	ELRGAAERRALRVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAIEQLLSEQTY*
Ga0126378_101462711	3300010361	Tropical Forest Soil	LRVIVENKNGMIGEPGIFIPRQYRQHAEDELRAQEVFEIAMHRLGSDDRDAFFMRVVELVANTWLTKDDR
Ga0126378_109914342	3300010361	Tropical Forest Soil	VILENENGMIGDPGIFIPRQYRQHAEDELRAQEVFEIAMQRLGTDDRDAFFMRVVELVANTWLTKDDRQAVDQLLSEQRYLDPAQP*
Ga0126378_113530221	3300010361	Tropical Forest Soil	RVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTNDDQQAIEQMLSEQTY*
Ga0126378_116583612	3300010361	Tropical Forest Soil	RRAAERRALRVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAIEQLLSEQTY*
Ga0126379_118770061	3300010366	Tropical Forest Soil	RRALRVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAIEQLLSEQTY*
Ga0126381_1031456052	3300010376	Tropical Forest Soil	IHDNKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAIEQLLSEQTY*
Ga0126381_1034345112	3300010376	Tropical Forest Soil	RNRTPKEELRRAAERRALRVIHENKNGMIGDPGIFIPRQYRQHAEDELRAQEVFEIAMHRLGTDDRDAFFVRVVELVANTWLTKDDRQAIEQLLSEQTY*
Ga0126383_101872855	3300010398	Tropical Forest Soil	AAERRALRVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTKDDQQAIEQLLSEQTY*
Ga0137392_113883641	3300011269	Vadose Zone Soil	SGGRHRRSIKSKEELRQAAERRAVQVIVENENGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRHLGIDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRYL*
Ga0137393_104049491	3300011271	Vadose Zone Soil	DNEKGMIGSPGIFVPRQYRQHTEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQPY*
Ga0137388_117679741	3300012189	Vadose Zone Soil	VIVDNENGMIGRPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0137382_111623572	3300012200	Vadose Zone Soil	VIVDNDNGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMGVVELIANTWLTKEDRQAVEQLLSEQSPV*
Ga0137365_113173931	3300012201	Vadose Zone Soil	SDGRRRRSDRSKEELRRAAERRVVRLIVDNENGMIGSPGIFVPRQYRQDAEDEPRAQEVFAIAMRCLGTDDRDAFFMRVVELIANTWLTKDDWQAIDQLLSEHLLV*
Ga0137363_102470721	3300012202	Vadose Zone Soil	QSASRRRRSGRSKEELRQAAERRAVQVIVDNEKGMIGSPGIFVPRQYRQHAEDELRAQEVFDIAMRLLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQPY*
Ga0137363_105201461	3300012202	Vadose Zone Soil	LQVIVENENGVIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0137378_104443262	3300012210	Vadose Zone Soil	MIGNPGIFVPRQYRQHAEDELRAQEVFAIAMRHLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQPY*
Ga0137378_110107571	3300012210	Vadose Zone Soil	ERRAVRVIVDNNNGMIGSPGIFVPRQYRQGAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0137377_114128332	3300012211	Vadose Zone Soil	RRVVRLIVDNENGMIGSPGIFVPRQYRQDAEDELRAQEVFAIAMRRLGTDDRDAFFMRVVELIANTWLTKDDRQAIDQLLSEHLLV*
Ga0137370_101603621	3300012285	Vadose Zone Soil	RSKEELRRAAERSAVQVIVDNKRGMIGNPGIFVPRQYRQHAEDELRALEVFEIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRLAVEQLLSEQHY*
Ga0137360_109935471	3300012361	Vadose Zone Soil	GAERRAVQVIVDNKRGMIGNPGIFVPRQYRQEAENELRAQEVFDIAMRHLGIDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRYL*
Ga0137395_103677732	3300012917	Vadose Zone Soil	LQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0137396_103634652	3300012918	Vadose Zone Soil	VRVIVDNQHGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQVLV*
Ga0137394_113952561	3300012922	Vadose Zone Soil	QSDGHRRRNSRSKAELRQAAERNAVRAIVDNEKGMIGNPGLFVPRQYRQEAEDELRAQQVFDIAMRRRGTEDRDGFFMQVIELIANTWLTKDDRQAVEQLLSEQRY*
Ga0137394_115618512	3300012922	Vadose Zone Soil	VRVIVDNNKGMIGSPGIFVPRQYRQTAEDELRAQEVFDIAMRRQGTDDRDAFFMRMVELVANIWLTKDDRQAVEQLLSEQGY*
Ga0137359_101093101	3300012923	Vadose Zone Soil	AAERRAVRVIVDNENGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFLMRVVELIANTWLTKDDRLAVDQLLSEQFLV*
Ga0137359_110186611	3300012923	Vadose Zone Soil	KEELRQAAERRVVRVIVDNQHGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQVLV*
Ga0137359_114451142	3300012923	Vadose Zone Soil	VIVDNANGMIGSLGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQCYV*
Ga0137413_107167431	3300012924	Vadose Zone Soil	PQPSRRHRRSRSKEELLRAAERSAAQVIIDNKRGMIGSPGIFVPRQYRQHAEDELRAQEVFDIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY*
Ga0137404_121085281	3300012929	Vadose Zone Soil	RNLIKPVSANPGAVQGGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVASTWLTKDDRQAIEQLLSEQHYI*
Ga0164303_105459611	3300012957	Soil	NGMIGSPGIFVPRQYRQDAEDELRAQEVFEIAMRRLGTDDRDAFFIRVVELVANTWLTKDDRQAVEQLLSEQHYI*
Ga0126369_123439372	3300012971	Tropical Forest Soil	RLIHENKNGMIGDPGIFIPRQYRQHAEDELRAQEVFEIAMHCLGTDDRDAFFMRVVELVANTWLTKDDRQAIEQLLSEQTY*
Ga0126369_125686381	3300012971	Tropical Forest Soil	AYPRSDCLQKLGNRTKEELRRAAERRVLRVILENENGMIGDPGIFIPRQYRQHAEDELRAQEVFEIAMQRLGTDDRDAFFMRVVELVANTWLTKDDRQAVDQLLSEQRYLDPAQP*
Ga0137403_109591842	3300015264	Vadose Zone Soil	RNLIKPVSANPGAVQGGMIGSPGIFVPRQYRQDAEDELRAREVFDIAMRRLGTDDRDAFFMRVVELVASTWLTKDDRQAIEQLLSEQHYI*
Ga0182036_101666422	3300016270	Soil	LIFGNRNGMIVSPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTDDRDGFFIRVVELVAKSWLTKDDQQAVEQLLSEQRY
Ga0182041_105212962	3300016294	Soil	GITPKEKLRQTTERRALRVIAENENGMIGDPGTFIPRQYRQHAEDELKAQEVFEIAMSRLGTYDRDAFFMRVVELVANTWLTKDDRQAIEQLLSEQRYFDRAQP
Ga0182033_101979282	3300016319	Soil	PQSDGRRRRDSRSKEEVRRAAERRAVRVIVDNENGMIGIPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTSDRDAFFMQVVELVAQTWLTKDDRQAVEQLVSEQCY
Ga0182035_103684421	3300016341	Soil	SRSKEELRQEAERSAVQVILDNSKGMIGSPGIFVPRQYRQHAEDELRAQEVFEIAMRRLCTDDRDAFFMQVVELVANTWLTKEDQQAVEQLVSEQCY
Ga0182034_108395121	3300016371	Soil	SRPKEELRRAAERSAVQVIVDNKKGMIGSPGIFVPRQYRQHAEDELRAQEVFEIAMRRLCTDDRDAFFMQVVELVANTWLTKEDQQAVEQLVSEQCY
Ga0182038_105982152	3300016445	Soil	AAERRALQVIVENENGIIGDPGMFMPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0179594_102562431	3300020170	Vadose Zone Soil	KEELRQAADRRAVRVIVDNEGGMIGSPGIFVPRQYRQDAEDELRAREVFDIAMRRLGTDDRDAFFMRVVELVASTWLTKDDRQAIEQLLSEQHYI
Ga0210407_102537113	3300020579	Soil	AERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210407_107972351	3300020579	Soil	DERCALRVLLENKNGMIGSPGLFVPRQYRQEAEDELRAQQVFDIAMRRRGTEDRDRFFMQVIELIANTWLTKDDRQAVEQLLSEQGY
Ga0210403_103089523	3300020580	Soil	RRAAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210403_103521671	3300020580	Soil	FPRSDRPHKLGSRSKEELRRAAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210399_100902241	3300020581	Soil	RRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210399_104849382	3300020581	Soil	QSRDRPRRSRSKEELRRAAEHRALQVIVENESGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVVNTWLTKDDRQAVEQLLSEQRY
Ga0210399_110419891	3300020581	Soil	LQEAFPRSDRPHKLGSRSKEELRRAAERRALQVIVGNENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRLGTEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210401_113219511	3300020583	Soil	LDNTRGMIGSPGIFVPRQYRQHAEDELRAQEVFEIAMRRVGAEDRDAFFMQVVELVANNWLTKDDVQAVEQLLSEQRYER
Ga0210389_110060782	3300021404	Soil	RAVQVIVDNENGIIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVADTWLTKDDRQAVEQLLSEQRY
Ga0210384_110226281	3300021432	Soil	PRSDRPHKLGSRSKEELRRAAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210392_106956331	3300021475	Soil	LRRAAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210402_104838352	3300021478	Soil	EELRRAAERRALQVIVENENGMIGDPGMFMPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0210402_114253851	3300021478	Soil	MLAAGSKRFKAELRQAAERRAVRVIVDSENGIIGSPGIFIPRQYRQGAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0126371_124055622	3300021560	Tropical Forest Soil	AVASKEQLHTAPVSGKRLLAERRALRVIHENKNGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELVAKTWLTNDDQQAIEQMLSEQTY
Ga0126371_125802001	3300021560	Tropical Forest Soil	VIHENKNGMIGDPGVFIPRQYRQHAEDELRAQEVFEIAMQRLGTDDRDAFFMRVVELVANTWLTKDDRQAVDQLLSEQRYLDPAQP
Ga0207699_105744161	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PRSDGVHKLGGRSKEELRRAAERRALQVIVENENRMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAKDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0257146_10596321	3300026374	Soil	GRRRRSSKSQEELRQAAERNAVRAIVDNEKGMIGSPGIFVPRQYRQHTEDELRAQEVFDIAMSRLGTDDRDAFFMRVVELVSNTWLTKDDRQAVEQLLSEQRY
Ga0209474_103980252	3300026550	Soil	RAVRVIVDNNNGMIGSPGIFVPRQYRQGAEDELRAQEVFDIAMRRQGTDDRDAFFMRVVELVANIWLTKDDRQAVEQLLSEQGY
Ga0209217_11676111	3300027651	Forest Soil	VIVENENGMIDDPGMFVPRQYRQHAEDELRAHEVFEIAMRWLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0209388_12085021	3300027655	Vadose Zone Soil	ELRQAAERRAVRVIVDNQHGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLSTDDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQGYI
Ga0209328_101027581	3300027727	Forest Soil	VIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0209488_100663212	3300027903	Vadose Zone Soil	VRAIVDNEKGMIGNPGLFVPRQYRQEAEDELRAQQVFDIAMRRRGTEDRDGFFMQVIELIANTWLTKDDRQAVEQLLSEQRY
Ga0209488_111038541	3300027903	Vadose Zone Soil	IVDNQHGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQVLV
Ga0209488_111406682	3300027903	Vadose Zone Soil	SRSKEELRRAAERRAVQALVDNENGMIGDPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGADDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0137415_100895554	3300028536	Vadose Zone Soil	VRVIVDNEGGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0308309_103476481	3300028906	Soil	ALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVVNTWLTKDDRQAVEQLLSEQRY
Ga0222749_102339601	3300029636	Soil	LAAGSKRFKAELRQAAERRAVRVIVDSENGIIGSPGIFIPRQYRQGAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0170834_1044088762	3300031057	Forest Soil	IVENENGMIGDPGMFLPRQYRQHAEDELRAHEVFEIAMQRLGAEDRDAFFMQVAELVANTWLTKDDRQAVEQLLSEQRY
Ga0170824_1009982771	3300031231	Forest Soil	NKRSKEEFRRAAEHRAVRVIVGNKNGMIGSPEIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0170818_1102971822	3300031474	Forest Soil	VRVIVDNEGGMIGSPGIFVPRQYRQDAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVASTWLTKDDRQAIEQLLSEQHL
Ga0318541_101715421	3300031545	Soil	VRRAAERRAVRVIVDNENGMIGIPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTSDRDAFFMQVVELVAQTWLTKDDRQAVEQLVSEQCY
Ga0318538_101560852	3300031546	Soil	DRSREVGITPKEKLRRTTERRALRVIAENENGMIGDPGTFIPRQYRQHAEDELKAQEVFEIAMSRLGTYDRDAFFMRVVELVANTWLTKDDRQAIEQLLSEQRYFDRAQP
Ga0318542_101178972	3300031668	Soil	QDAYPQYDGGRRSRSGSMAELRRAAQRRAMQLIFGNRNGMIGSPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTDDRDGFFIRVVELVAKSWLTKDDQQAVEQLLSEQRY
Ga0306917_113274351	3300031719	Soil	DNENGMIGIPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTSDRDAFFMQVVELVAQTWLTKDDRQAVEQLVSEQCY
Ga0307477_101945521	3300031753	Hardwood Forest Soil	QSGGRHRRSRSKEELRRAAERSAVQVIVDNKKGMIGNPGIFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELIAKTWLTKDDRQAIEQLLSEQRY
Ga0307477_109789301	3300031753	Hardwood Forest Soil	GMIGSPGIFVPRQYRQHAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVELVANNWLTKDDQQAVEQLLSEQRY
Ga0318529_103254711	3300031792	Soil	RNGMIGSPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTDDRDGFFMRVVELVAKSWLTKDDQQAVEQLLSEQRY
Ga0318557_100531971	3300031795	Soil	RAPKEELRRAAERRALRVIHENKNGMIGNPGVFVPRQYRQHAEDELRAQEVFEIAMTRLGTDDRDAFFMRVVELVAKTWLTNDDQQAIEQILSEQT
Ga0306925_115790941	3300031890	Soil	PRSDCLRRLGSSRSREDLRRTAERRALRVILENEKGIIGEPGIFVPRQYRQRAEDELRAQEVFDIAMRRLGTDDRDAFFMRVVGLVANTWLTRDDRQAVEQLLSEQRY
Ga0318536_105861551	3300031893	Soil	RRRNRAPKEELRRAAERRALRVIHENKNGMIGNPGVFVPRQYRQHAEDELRAQEVFEIAMTRLGTDDRDAFFMRVVELVAKTWLTNDDQQAIEQILSEQT
Ga0306923_117198611	3300031910	Soil	AERSAVQVILDNSKGMIGSPGIFVPRQYRQHAEDELRAHEVFEIAMRRIGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0306921_117135961	3300031912	Soil	AAERRALQVIVENENGMIGDPGMFMPRQYRQHAEDELRAHEVFEIAMRRIGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0310916_104509732	3300031942	Soil	RAYPRSDGRHRRSRPKEELRRAAERSAVQVIVDNKKGMIGSPGIFVPRQYRQHAEDELRAQEVFEIAMRRLCTDDRDAFFMQVVELVANTWLTKEDQQAVEQLVSEQCY
Ga0310913_110096841	3300031945	Soil	ENGMIGIPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTSDRDAFFMQVVELVAQTWLTKDDRQAVEQLVSEQCY
Ga0306922_116083492	3300032001	Soil	EAFPRSDRPHKLGSRSKEELRWAAERRALQVIVENENGMIGDPGMFMPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0310911_106872942	3300032035	Soil	RRTTERRALRVIAENENGMIGDPGTFIPRQYRQHAEDELKAQEVFEIAMSRLGTYDRDAFFMRVVELVANTWLTKDDRQAIEQLLSEQRYFDRAQP
Ga0318514_107722141	3300032066	Soil	GRRSRSGSMAELRRAAQRRAMQLIFGNRNGMIGSPGIFVPRQYRQNAEDELRAQQVFDIAMRRLGTDDRDGFFMRVVELVAKSWLTKDDQQAVEQLLSEQRY
Ga0307471_1016564912	3300032180	Hardwood Forest Soil	RKLGSRSKEELRRAAERRALRVIVENENGMIGSPGIFVPRQYRQEAEDELRAQQVFDIAMRRRGTDDRDAFFMQVVELVANTWLNKDDRQAVEQLLSEQRY
Ga0307472_1009302431	3300032205	Hardwood Forest Soil	LRRAAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAQEVFEIAMRRLGTDDRDAFFMRVVELIANTWLTKEDRQAVEQLLSEQRY
Ga0307472_1021956231	3300032205	Hardwood Forest Soil	AAERRALQVIVENENGMIGDPGMFVPRQYRQHAEDELRAHEVFEIAMRRLGAEDRDAFFMQVVELVANTWLTKDDRQAVEQLLSEQRY
Ga0310914_1000204213	3300033289	Soil	VIAENENGMIGDPGTFIPRQYRQHAEDELKAQEVFEIAMSRLGTYDRDAFFMRVVELVANTWLTKDDRQAIEQLLSEQRYFDRAQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082432

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences