Metagenome / Metatranscriptome Family F082509

Basic Information
Family ID	F082509
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	45 residues
Representative Sequence	YHPWADVVTIIGFLDDLRDDWGSERLLVEDMLARAVAELGGTSR
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.77 %
% of genes near scaffold ends (potentially truncated)	85.84 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (58.407 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.664 % of family members)
Environment Ontology (ENVO)	Unclassified (31.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.938 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00106	adh_short	18.58
PF01740	STAS	16.81
PF06689	zf-C4_ClpX	9.73
PF13561	adh_short_C2	7.08
PF13411	MerR_1	7.08
PF02861	Clp_N	6.19
PF03243	MerB	5.31
PF01636	APH	1.77
PF00690	Cation_ATPase_N	1.77
PF04149	DUF397	0.88
PF00072	Response_reg	0.88
PF00293	NUDIX	0.88
PF13565	HTH_32	0.88
PF00005	ABC_tran	0.88
PF13692	Glyco_trans_1_4	0.88
PF13384	HTH_23	0.88
PF00667	FAD_binding_1	0.88
PF08044	DUF1707	0.88
PF00376	MerR	0.88
PF01513	NAD_kinase	0.88
PF00089	Trypsin	0.88
PF00710	Asparaginase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	6.19
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.77
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	1.77
COG0369	Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases	Nucleotide transport and metabolism [F]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.41 %
Unclassified	root	N/A	41.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.41 %
Unclassified	root	N/A	41.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.41 %
Unclassified	root	N/A	41.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.90 %
Unclassified	root	N/A	41.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.25 %
Unclassified	root	N/A	41.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	7.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.54 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.85 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	7.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.42 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.65 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.85 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	7.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.65 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.85 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	4.42 %
Streptomyces albicerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	3.54 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.88 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.88 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.85 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	4.42 %
Streptomyces albicerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	3.54 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Streptomyces sp. Ncost-T10-10d	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Ncost-T10-10d	0.88 %
Pseudonocardia sp. TRM90224	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	0.88 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig27033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	569	Open in IMG/M
3300003505\|JGIcombinedJ51221_10204072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	802	Open in IMG/M
3300004643\|Ga0062591_101678229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	643	Open in IMG/M
3300005336\|Ga0070680_100466007	Not Available	1080	Open in IMG/M
3300005364\|Ga0070673_100547723	Not Available	1051	Open in IMG/M
3300005435\|Ga0070714_100301950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1493	Open in IMG/M
3300005467\|Ga0070706_101229939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300005467\|Ga0070706_101810440	Not Available	555	Open in IMG/M
3300005545\|Ga0070695_100714252	Not Available	797	Open in IMG/M
3300005578\|Ga0068854_100560354	Not Available	970	Open in IMG/M
3300005598\|Ga0066706_11477736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	512	Open in IMG/M
3300005614\|Ga0068856_100597171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300005713\|Ga0066905_101658545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300005898\|Ga0075276_10161416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300006755\|Ga0079222_10776065	Not Available	777	Open in IMG/M
3300006804\|Ga0079221_10512316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300006804\|Ga0079221_11623803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	524	Open in IMG/M
3300006904\|Ga0075424_102320808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300006914\|Ga0075436_100542869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	853	Open in IMG/M
3300009089\|Ga0099828_10861391	Not Available	810	Open in IMG/M
3300009090\|Ga0099827_11382812	Not Available	613	Open in IMG/M
3300009137\|Ga0066709_100748290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1411	Open in IMG/M
3300009156\|Ga0111538_13947149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	513	Open in IMG/M
3300009545\|Ga0105237_10921853	Not Available	881	Open in IMG/M
3300009792\|Ga0126374_11005209	Not Available	654	Open in IMG/M
3300010337\|Ga0134062_10782008	Not Available	509	Open in IMG/M
3300010360\|Ga0126372_10222865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	1592	Open in IMG/M
3300010397\|Ga0134124_12353074	Not Available	574	Open in IMG/M
3300010876\|Ga0126361_11052459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2251	Open in IMG/M
3300011269\|Ga0137392_10603670	Not Available	911	Open in IMG/M
3300011269\|Ga0137392_10880904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	738	Open in IMG/M
3300011271\|Ga0137393_10358658	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1246	Open in IMG/M
3300012189\|Ga0137388_11810800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	542	Open in IMG/M
3300012198\|Ga0137364_11103831	Not Available	597	Open in IMG/M
3300012200\|Ga0137382_10952440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	617	Open in IMG/M
3300012285\|Ga0137370_10769138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	598	Open in IMG/M
3300012350\|Ga0137372_10635148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300012351\|Ga0137386_10123606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300012351\|Ga0137386_10858547	Not Available	652	Open in IMG/M
3300012351\|Ga0137386_11245157	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012356\|Ga0137371_10040697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3588	Open in IMG/M
3300012356\|Ga0137371_10114703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2103	Open in IMG/M
3300012357\|Ga0137384_10755756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300012515\|Ga0157338_1035845	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012683\|Ga0137398_10645698	Not Available	734	Open in IMG/M
3300012683\|Ga0137398_10768419	Not Available	672	Open in IMG/M
3300012929\|Ga0137404_11327113	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300016371\|Ga0182034_11856467	Not Available	531	Open in IMG/M
3300016387\|Ga0182040_11051629	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300016404\|Ga0182037_10529839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	991	Open in IMG/M
3300016404\|Ga0182037_11685683	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300016404\|Ga0182037_12029684	Not Available	516	Open in IMG/M
3300017932\|Ga0187814_10037703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1790	Open in IMG/M
3300017993\|Ga0187823_10346968	Not Available	528	Open in IMG/M
3300019887\|Ga0193729_1178727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300019887\|Ga0193729_1190244	Not Available	709	Open in IMG/M
3300020002\|Ga0193730_1041241	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1337	Open in IMG/M
3300020004\|Ga0193755_1141106	Not Available	738	Open in IMG/M
3300020199\|Ga0179592_10185204	Not Available	947	Open in IMG/M
3300021363\|Ga0193699_10118792	Not Available	1077	Open in IMG/M
3300021420\|Ga0210394_11381641	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300021474\|Ga0210390_10948306	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021479\|Ga0210410_10103570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M
3300021559\|Ga0210409_10440961	Not Available	1162	Open in IMG/M
3300022467\|Ga0224712_10069117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1429	Open in IMG/M
3300022467\|Ga0224712_10589063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	542	Open in IMG/M
3300024181\|Ga0247693_1055223	Not Available	579	Open in IMG/M
3300024187\|Ga0247672_1069788	Not Available	597	Open in IMG/M
3300025320\|Ga0209171_10154789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300025903\|Ga0207680_10231840	Not Available	1269	Open in IMG/M
3300025910\|Ga0207684_10273917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1456	Open in IMG/M
3300025910\|Ga0207684_10839653	Not Available	775	Open in IMG/M
3300025910\|Ga0207684_11111635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300025914\|Ga0207671_10473985	Not Available	998	Open in IMG/M
3300025915\|Ga0207693_10690267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300025916\|Ga0207663_10605440	Not Available	861	Open in IMG/M
3300025929\|Ga0207664_11629909	Not Available	567	Open in IMG/M
3300026374\|Ga0257146_1032846	Not Available	842	Open in IMG/M
3300026498\|Ga0257156_1063027	Not Available	767	Open in IMG/M
3300027787\|Ga0209074_10194275	Not Available	758	Open in IMG/M
3300027903\|Ga0209488_10859117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300027915\|Ga0209069_10788163	Not Available	566	Open in IMG/M
3300028755\|Ga0307316_10199255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	721	Open in IMG/M
3300028875\|Ga0307289_10433668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albicerus	540	Open in IMG/M
3300028885\|Ga0307304_10138016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300031543\|Ga0318516_10398535	Not Available	793	Open in IMG/M
3300031544\|Ga0318534_10807731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300031670\|Ga0307374_10029665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6409	Open in IMG/M
3300031718\|Ga0307474_11574064	Not Available	516	Open in IMG/M
3300031724\|Ga0318500_10674663	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031744\|Ga0306918_11321280	Not Available	554	Open in IMG/M
3300031747\|Ga0318502_10271006	Not Available	994	Open in IMG/M
3300031779\|Ga0318566_10596399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300031781\|Ga0318547_10377788	Not Available	868	Open in IMG/M
3300031782\|Ga0318552_10118572	Not Available	1317	Open in IMG/M
3300031793\|Ga0318548_10333208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300031819\|Ga0318568_10734627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	613	Open in IMG/M
3300031831\|Ga0318564_10266538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300031835\|Ga0318517_10464459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300031846\|Ga0318512_10727026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300031859\|Ga0318527_10239597	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031896\|Ga0318551_10037407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2389	Open in IMG/M
3300031912\|Ga0306921_10449709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Ncost-T10-10d	1501	Open in IMG/M
3300031947\|Ga0310909_10951606	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300031981\|Ga0318531_10302318	Not Available	723	Open in IMG/M
3300032008\|Ga0318562_10648605	Not Available	609	Open in IMG/M
3300032009\|Ga0318563_10551534	Not Available	622	Open in IMG/M
3300032052\|Ga0318506_10519039	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300032065\|Ga0318513_10529774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300032091\|Ga0318577_10504319	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032160\|Ga0311301_10785458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1313	Open in IMG/M
3300032898\|Ga0335072_10812149	Not Available	892	Open in IMG/M
3300033475\|Ga0310811_10287939	Not Available	1905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.15%
Host-Associated	Host-Associated	8.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.61%
Plants	Host-Associated → Plants	8.85%
Aquatic	Environmental → Aquatic	3.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.45%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082509

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00121260	2166559006	Grass Soil	ERFTVSWERVAGTAYHPWGDVVTVVGFLDDLHDDWGPERLLVEDMLARAMAELGG
JGIcombinedJ51221_102040722	3300003505	Forest Soil	VVTIIGSLDDLRDDWGSERHLVEDMLARAVAELGGMQHVPG*
Ga0062591_1016782291	3300004643	Soil	ERVAGTTYHPWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG*
Ga0070680_1004660071	3300005336	Corn Rhizosphere	TYHPWGDVVTVVGFLDDLHGDWGSERFGVEDMLARAVAELAR*
Ga0070673_1005477231	3300005364	Switchgrass Rhizosphere	ERVAGTTYHPWGDVVTVVGFLDDLHGDWGSERFGVEDMLARAVAELAR*
Ga0070714_1003019503	3300005435	Agricultural Soil	AGAAYHPWADVVTIIGFLDDLRDDWGPEEVLVEDMLARAVAELGATSR*
Ga0070706_1012299392	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RFTVRWEQAAGTTYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAIAELAG*
Ga0070706_1018104401	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AAGAAYHPRADVVTITGFLDHLRDDWGSERLPVEDMLARAVAELGGDSR*
Ga0070695_1007142521	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	HPWGDVVTVVGFLDDLHGDWGSERFGVEDMLARAVAELAR*
Ga0068854_1005603541	3300005578	Corn Rhizosphere	WEQIAGTTYHPWGDVVTIVGFLDDLHDDWGSERFGVEDMLARAIAELAG*
Ga0066706_114777362	3300005598	Soil	VTVVGFLDDLHDDWGSERLLVEDMLARAIAELAG*
Ga0068856_1005971712	3300005614	Corn Rhizosphere	VVTIIGFLDDLRDDWGPERLVVEDMLARAVTELDS*
Ga0066905_1016585451	3300005713	Tropical Forest Soil	AEHNPCGDVVTIVGFLDDLRDDWGWERLRVQDMLARATAELGR*
Ga0075276_101614162	3300005898	Rice Paddy Soil	HPWADVVTIIGFLDDLRDDWGSERLLIEDMLARAVAELSGTAR*
Ga0079222_107760651	3300006755	Agricultural Soil	VERFTACWERTAGTAYHPWGDVVTVVGFLDDLHDGWGSERLLVEDVLARAVAELGG*
Ga0079221_105123162	3300006804	Agricultural Soil	TAYHPWADVVTIIGFLDDLRDGWGSERLLVEDMLARAVAELGGQAA*
Ga0079221_116238032	3300006804	Agricultural Soil	YHPWGDVVTIVGFLDDLRGDWGPERLLVEDMLARAVAELGGG*
Ga0075424_1023208081	3300006904	Populus Rhizosphere	VASRFTVRWERVAGTTYHPWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG*
Ga0075436_1005428692	3300006914	Populus Rhizosphere	TIIGFLDDLRADWGSERLLVEEMLARAVAELGGTSR*
Ga0099828_108613912	3300009089	Vadose Zone Soil	FTALWQHAAGDTYHPWADVLTIIGFLDDLRDDWGSERLLIEDMLARAVADLGANSR*
Ga0099827_113828122	3300009090	Vadose Zone Soil	EVVSRFTAGWEREASAVYHPWGDVVTVVGFLDDLHDGWGSERLLVEDMLTRAVAELGG*
Ga0066709_1007482902	3300009137	Grasslands Soil	MVTIIGFLDDLRDDWGSERLLVEDMLARAVADLGGTSR*
Ga0111538_139471492	3300009156	Populus Rhizosphere	TYHPWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG*
Ga0105237_109218532	3300009545	Corn Rhizosphere	TTYHPWGDVVTVVGFLDDLHDGWGSERLLVEDMLARAVAELGG*
Ga0126374_110052091	3300009792	Tropical Forest Soil	PWGDVVTIVGFLDDLHDDWGSERLLVEDMLARAVAELATY*
Ga0134062_107820082	3300010337	Grasslands Soil	SRFTAGWEREASAVYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAVAELGG*
Ga0126372_102228651	3300010360	Tropical Forest Soil	HPWGDLVTIVGFLDDLRDDWGAERLLVEDMLARAVAALDG*
Ga0134124_123530741	3300010397	Terrestrial Soil	TYHPWGDVVTVVGFLDALHDDWGSERFGVEDMLARAVAELAG*
Ga0126361_110524591	3300010876	Boreal Forest Soil	RFTAVWQQAADAAYHPWGDIVTIIGFLDDLREDWGPERDLVEDMLARAVAELGRSR*
Ga0137392_106036701	3300011269	Vadose Zone Soil	DVVTIIGFLDDLRDDWGSERLRVEDMLARAVAELGGTSR*
Ga0137392_108809041	3300011269	Vadose Zone Soil	YHPWADVVTIIGFLDDLRDDWGSERLLVEDMLARAVAELGGTSR*
Ga0137393_103586583	3300011271	Vadose Zone Soil	YHPWADVVTIIGFLDDLRDESEWLLIEDTLARAVAELGGNSR*
Ga0137388_118108001	3300012189	Vadose Zone Soil	PWADVVTIIGFLDDLRDDWGSERLRVEDMLARAVAELGGTSR*
Ga0137364_111038312	3300012198	Vadose Zone Soil	EANAVYHPWGDVVTVVGFLDDLHDGWGSERLLVEDMLARAVAELGG*
Ga0137382_109524402	3300012200	Vadose Zone Soil	ERAAGAAYHPWGDVVTVVGFLDDLHDDWGSERFGVEDMLARAVAELAG*
Ga0137370_107691381	3300012285	Vadose Zone Soil	WEQLAGTTYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAIAELAG*
Ga0137372_106351481	3300012350	Vadose Zone Soil	QAASVTYHPWADVITIIGFLDDLRDDWGSERLLVEDMLARAVAELGGNTR*
Ga0137386_101236063	3300012351	Vadose Zone Soil	WQQAAGAAYHPWADVITIIGFLDDLCEDWGSERLLVEDMLARAVAELGGDSR*
Ga0137386_108585471	3300012351	Vadose Zone Soil	VVERFTVSWERTAGTAYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAVAELGG*
Ga0137386_112451571	3300012351	Vadose Zone Soil	VVTIIGFLDDLRGDWGPEGVLVEDMLARAVAELGGTSR*
Ga0137371_100406971	3300012356	Vadose Zone Soil	PWADVVTIIGFLDDLREDWGSERLLVEDMLARAVAELGGNSR*
Ga0137371_101147031	3300012356	Vadose Zone Soil	PWADVVTIIGFLDDLREDWGSERLLVEDMLARAVAELGGTSR*
Ga0137384_107557562	3300012357	Vadose Zone Soil	AAYHPWADVVTIIGFLDDLRDDWGPERLLVEDMLAQAVAGLGGVSR*
Ga0157338_10358452	3300012515	Arabidopsis Rhizosphere	ERVAGTAYHPWGDVVTIVGFLDDLHDDWGSERFGVEDVLARAVAELAR*
Ga0137398_106456982	3300012683	Vadose Zone Soil	CWEREASAVYHPWGDVVTIVGFLDDLHDGWGSERLLVEDVLAQAVAELGG*
Ga0137398_107684191	3300012683	Vadose Zone Soil	AYHPWADVVTIIGFLDDLRDDWGSEQFLVEDMLARAVAELGGTSR*
Ga0137404_113271132	3300012929	Vadose Zone Soil	DATYHPWADVVTIIGFLDDLRGDWGSERLLVEDRLARAIAELGGTSL*
Ga0182034_118564672	3300016371	Soil	AIIGFLDDLRDGWGSERHLVEDMLARAVAELGRNSR
Ga0182040_110516293	3300016387	Soil	FHPWADVVTIVGFLDDLCSGWGSDRYLLEDLLADAVAELDARS
Ga0182037_105298391	3300016404	Soil	IIGFLDDLRGDGGSVRLLVEDMLARAVAELGVNNR
Ga0182037_116856832	3300016404	Soil	VTGATFHPWADLVTIVGFLDDLRSGWGSDRYVVEDVLADAVAELDARS
Ga0182037_120296842	3300016404	Soil	WGDVVTVVGFLDDLRDDWGSERLLVEDMLARAVADLGG
Ga0187814_100377034	3300017932	Freshwater Sediment	AAYHPWADVVTIIGFLDDLRDDWGSERVLVEDMLTRAVAELGANSQVRNRRGR
Ga0187823_103469682	3300017993	Freshwater Sediment	VVTIVGFLDDLRDGWGSERLLVEDVLARAVAELGG
Ga0193729_11787271	3300019887	Soil	AAYHPWADVVTIIGFLDDLRDDWGSEQLLVEDMLARAVAELGTNGR
Ga0193729_11902442	3300019887	Soil	VVIVVGFLDDLHDDWGSERLLVEDMLARAVAELGG
Ga0193730_10412411	3300020002	Soil	VVTITGFLDDLREDWGSERLLVEGMLARAVAELGGSSR
Ga0193755_11411061	3300020004	Soil	WEQVAGATYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAIAELAR
Ga0179592_101852042	3300020199	Vadose Zone Soil	AYHPWADVVTILGFLDDLRGDWGSERLLVEDMLARAVAELGGTSR
Ga0193699_101187923	3300021363	Soil	VVTVVGFLDDLHDDWGSERLLVEDMLARAVAELGG
Ga0210394_113816412	3300021420	Soil	VVTIVGFLDDLRGDWGPERLLVEDMLARAVAELGG
Ga0210390_109483062	3300021474	Soil	FTVSWERAAGAAYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAMAELAG
Ga0210410_101035701	3300021479	Soil	AGTVYHPWGDVVTIVGFLDDLRGDWGRERLLVEDMLARAVAELGGNSR
Ga0210409_104409613	3300021559	Soil	VVTIVGFLDDLRGDWGPERLLVEDMLARAVAELGGG
Ga0224712_100691171	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VVTIIGFLDDLRDDWGPERLVVEDMLARAVTELDS
Ga0224712_105890631	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	DVVTVVGFLDDLHGDWGSERFGVEDMLARAVAELAR
Ga0247693_10552232	3300024181	Soil	GDVVTVVGFLDDLHDDWGSERFGVEDMLARAVAELAR
Ga0247672_10697882	3300024187	Soil	AGTTYHPWGDVVTVVGFLDDLHDDWGSERFGVEDMLARAVAELAR
Ga0209171_101547894	3300025320	Iron-Sulfur Acid Spring	RAAGATYHPWADVVTIIGFLDDLRDGWGSERLRAEDMLARAVAELGGTSR
Ga0207680_102318401	3300025903	Switchgrass Rhizosphere	TVRWERVAGTTYHPWGDVVTVVGFLDDLHDDWGSERFGVEDMLARAVAELAR
Ga0207684_102739173	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	WQQAAGAAYHPWADVVTIIGFLDDLREDWGSERLLVEDMLARAVAELGENSR
Ga0207684_108396532	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EVASRFTVRWEQAAGTTYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAIAELAG
Ga0207684_111116352	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TIIGFLDHLRDDWGSERLPVEDMLARAVAELGGDSR
Ga0207671_104739851	3300025914	Corn Rhizosphere	ERVAGTTYHPWGDVVTVVGFLDDLHGDWGSERFGVEDMLARAVAELAR
Ga0207693_106902671	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TIIGFLDDLREDWGSERLLVEDMLGRAVAELGGNSR
Ga0207663_106054402	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RWEQVADTTYHPWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG
Ga0207664_116299092	3300025929	Agricultural Soil	PWGDVVTIVGFLDDLRGDWGRERLLVEDMLARAVAGC
Ga0257146_10328461	3300026374	Soil	RFTRMWERVAGAEYHPWGDVVTIVGFLDDLRDDWGSERLLVEDMLTRAVTDLAG
Ga0257156_10630272	3300026498	Soil	MWEQVAGAEYHPWGDVVTIVGFLDDLRDDWGSERLLVEDMLTRAVTDLAG
Ga0209074_101942752	3300027787	Agricultural Soil	RTAGTAYHPWGDVVTVVGFLDDLHDGWGSERLLVEDVLVRAVAELGG
Ga0209488_108591172	3300027903	Vadose Zone Soil	VGHRVFLDDLCEDWGSERLLVEDMLARAVAELGGDSR
Ga0209069_107881631	3300027915	Watersheds	CWEREANALYHPWGDVVTVIGFLDDLHDGLGSERLLVEDVLARAVAELGG
Ga0307316_101992551	3300028755	Soil	VVTITGFLDDLREDWGSERLLVEGMLARAVAELGESSR
Ga0307289_104336682	3300028875	Soil	RFTVRWEQVAGATYHPWGDVVTVVGFLDDLHDDWGSERLLVEDMLARAIAELAR
Ga0307304_101380162	3300028885	Soil	VVTITGFLDDLREDWGSERLLVEGILARAVAELGGSSR
Ga0318516_103985351	3300031543	Soil	SWERVAGTAYHPWGDVVTIVGFLDDLRDDWGSERLLVEDMLARAVTELRG
Ga0318534_108077312	3300031544	Soil	TYHPWADVVAIIGFLDDLRDGWGSERHLVEDMLARAVAELGRNSR
Ga0307374_100296652	3300031670	Soil	VVTVIGFLDDLREEQGSDHDLVEDLLAQAVAELRRGP
Ga0307474_115740641	3300031718	Hardwood Forest Soil	FTACWEREACAVYHPWGDVVTIVGFLDDLHDDWGPERLLVEDVLARAVAELGG
Ga0318500_106746631	3300031724	Soil	PWADVVTIVGFLDDLRSGWGSDRYLLEDLLADAVAELDARS
Ga0306918_113212801	3300031744	Soil	TERFTGSWERAAGAEYHPWGDVVTIVGFLDDLRDDWGSEQFLVEDMLARAVTELTR
Ga0318502_102710062	3300031747	Soil	VVTVVGFLDDLHEDWGPERLLVEDMLARAVAGLGGG
Ga0318566_105963991	3300031779	Soil	YHPWADVVTITGFLDDLRDDQGSERDLVEDMLALAVAEIGGSSQ
Ga0318547_103777882	3300031781	Soil	AYHPWGDVVTIVGFLDDLRDDWGSERLLVEDMLARAVTELRG
Ga0318552_101185722	3300031782	Soil	VAERFTVSWELVAGAAYHPWGDVVTIVGFLDDLRDDWGSERLLVEDMLARAVTELRG
Ga0318548_103332081	3300031793	Soil	TYHPWADVVTIIGFLDDLRGDQGSERHLVEDMLARAVAEIGGSSQ
Ga0318568_107346271	3300031819	Soil	VVTIIGFLDDLRDGWGSERLLVEDMLARAVAELVGNNR
Ga0318564_102665382	3300031831	Soil	VVTIIGFLDDLRDGWGPERNLVEDLLARAIAELGGNSR
Ga0318517_104644591	3300031835	Soil	ADVVTIIGFLDDLRGDQGSERHLVEDMLARAVAEIGGSSQ
Ga0318512_107270261	3300031846	Soil	FTAFRQQAAGAAYHPWGDVVTIIGFLDDLRDGWGSERHLVEDMLARAVAELGGNSR
Ga0318527_102395971	3300031859	Soil	GDSFHPWADVVTIVGFLDDLRSGWGSDRYLLEDLLADAVAELDARS
Ga0318551_100374071	3300031896	Soil	VVTVVGFLDDLHADWGPERLLVEDMLARAVADLGGG
Ga0306921_104497092	3300031912	Soil	LWEEVTGATFHPWADLVTIVGFLDDLRSGWGSDRYLVEDVLADAVAELDARS
Ga0310909_109516061	3300031947	Soil	VTIVGFFDDLRSGWGSERYLVEDLLVDAVAELDARP
Ga0318531_103023181	3300031981	Soil	VLWQRTAGATYHPWADVVTIIGFLDDLRDDQGSERHLVEDMLARAVAEIGGSSQ
Ga0318562_106486051	3300032008	Soil	WADVVTIIGFLDDLRDDQGSERHLVEDMLARAVAEIGGSSQ
Ga0318563_105515342	3300032009	Soil	VSWERVAGIAYHPWGDVVTVVGFLDDLRDDWGSERLLVEDMLARAVADLGG
Ga0318506_105190392	3300032052	Soil	HPWADVVTIVGFLDDLRSGWGSDRYLLEDLLADAVAELDARS
Ga0318513_105297741	3300032065	Soil	YHPWGDVVTVVGFLDDLRGDWGRERHLVEDLLARAVAELGG
Ga0318577_105043192	3300032091	Soil	WADVVTIVGFLDDLRSGWGSDRYLLEDLLADAVAELDARS
Ga0311301_107854582	3300032160	Peatlands Soil	ALWQRAAGDTYHPWADVVTIIGFLDDLRDDPGSGPDPVEDMFARAVAELGGTRR
Ga0335072_108121491	3300032898	Soil	PWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG
Ga0310811_102879391	3300033475	Soil	VASRFTVHWERVAGTTYHPWGDVVTVVGFLDDLHDDWGSERFAVEDMLARAVAELAG

Hidden Markov Model


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