NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F082879

Metagenome Family F082879

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F082879
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 62 residues
Representative Sequence MSSEAEETEFIQAMHALEEFVKILVKEYPLVFKDGSGAIKISPSIKKQFFPYEASLKIRKKK
Number of Associated Samples 75
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 27.93 %
% of genes near scaffold ends (potentially truncated) 20.35 %
% of genes from short scaffolds (< 2000 bps) 80.53 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (49.558 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(14.159 % of family members)
Environment Ontology (ENVO) Unclassified
(32.743 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(34.513 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.33%    β-sheet: 15.56%    Coil/Unstructured: 51.11%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF11946DUF3463 4.42
PF08271TF_Zn_Ribbon 3.54
PF12641Flavodoxin_3 3.54
PF01037AsnC_trans_reg 2.65
PF03551PadR 1.77
PF12773DZR 1.77
PF00149Metallophos 0.88
PF01243Putative_PNPOx 0.88
PF14947HTH_45 0.88
PF13570PQQ_3 0.88
PF01494FAD_binding_3 0.88
PF13360PQQ_2 0.88
PF00266Aminotran_5 0.88
PF00589Phage_integrase 0.88
PF01578Cytochrom_C_asm 0.88
PF01867Cas_Cas1 0.88
PF02537CRCB 0.88
PF02690Na_Pi_cotrans 0.88
PF01699Na_Ca_ex 0.88
PF02861Clp_N 0.88
PF10431ClpB_D2-small 0.88
PF04014MazE_antitoxin 0.88
PF01544CorA 0.88
PF02245Pur_DNA_glyco 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.77
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.77
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.77
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.77
COG0239Fluoride ion exporter CrcB/FEX, affects chromosome condensationCell cycle control, cell division, chromosome partitioning [D] 0.88
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 0.88
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 0.88
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.88
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.88
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.88
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.88
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.88
COG1283Na+/phosphate symporterInorganic ion transport and metabolism [P] 0.88
COG1518CRISPR-Cas system-associated integrase Cas1Defense mechanisms [V] 0.88
COG20943-methyladenine DNA glycosylase MpgReplication, recombination and repair [L] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.98 %
UnclassifiedrootN/A46.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000030|WSSedB1B_c042142Not Available606Open in IMG/M
3300001213|JGIcombinedJ13530_105230084All Organisms → cellular organisms → Archaea1902Open in IMG/M
3300003432|JGI20214J51088_10052209All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2845Open in IMG/M
3300003432|JGI20214J51088_10057520All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2711Open in IMG/M
3300003432|JGI20214J51088_10090407Not Available2153Open in IMG/M
3300003432|JGI20214J51088_10107857All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1964Open in IMG/M
3300003432|JGI20214J51088_10122227All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1842Open in IMG/M
3300003432|JGI20214J51088_10701620Not Available647Open in IMG/M
3300003541|JGI20214J51650_10052115All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon2718Open in IMG/M
3300003541|JGI20214J51650_10194371All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1399Open in IMG/M
3300003541|JGI20214J51650_10284762All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1145Open in IMG/M
3300003541|JGI20214J51650_10420540All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon933Open in IMG/M
3300003541|JGI20214J51650_10963347All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon595Open in IMG/M
3300003852|Ga0031655_10028061All Organisms → cellular organisms → Bacteria2627Open in IMG/M
3300004066|Ga0055484_10009562All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1624Open in IMG/M
3300004072|Ga0055512_10040432All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota793Open in IMG/M
3300004078|Ga0055513_10143187All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon583Open in IMG/M
3300004079|Ga0055514_10000515All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2949Open in IMG/M
3300005213|Ga0068998_10039905All Organisms → cellular organisms → Archaea → TACK group888Open in IMG/M
3300005216|Ga0068994_10251088Not Available517Open in IMG/M
3300005219|Ga0069004_10039963Not Available1039Open in IMG/M
3300006224|Ga0079037_100241642Not Available1647Open in IMG/M
3300006224|Ga0079037_100304531Not Available1479Open in IMG/M
3300006636|Ga0075525_10034855All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon994Open in IMG/M
3300006636|Ga0075525_10079554Not Available628Open in IMG/M
3300006864|Ga0066797_1102772Not Available1001Open in IMG/M
3300006949|Ga0075528_10121310Not Available694Open in IMG/M
3300006950|Ga0075524_10010388All Organisms → cellular organisms → Bacteria3429Open in IMG/M
3300006950|Ga0075524_10012499All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3180Open in IMG/M
3300006950|Ga0075524_10034777Not Available2043Open in IMG/M
3300006950|Ga0075524_10088795Not Available1313Open in IMG/M
3300009053|Ga0105095_10406546Not Available752Open in IMG/M
3300009078|Ga0105106_10053224All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2990Open in IMG/M
3300009085|Ga0105103_10106399All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1461Open in IMG/M
3300009087|Ga0105107_10213969All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1349Open in IMG/M
3300009153|Ga0105094_10278634All Organisms → cellular organisms → Archaea962Open in IMG/M
3300009165|Ga0105102_10278959All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon859Open in IMG/M
3300009166|Ga0105100_10110441All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1619Open in IMG/M
3300009167|Ga0113563_11320839Not Available844Open in IMG/M
3300009167|Ga0113563_11784154Not Available731Open in IMG/M
3300009168|Ga0105104_10112410All Organisms → cellular organisms → Archaea1467Open in IMG/M
3300009171|Ga0105101_10229240Not Available898Open in IMG/M
3300009630|Ga0116114_1062407Not Available1032Open in IMG/M
3300010339|Ga0074046_10023606All Organisms → cellular organisms → Archaea4275Open in IMG/M
3300014162|Ga0181538_10263228Not Available947Open in IMG/M
3300014316|Ga0075339_1097991All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon775Open in IMG/M
3300014494|Ga0182017_10940261Not Available519Open in IMG/M
3300014498|Ga0182019_10092700All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1835Open in IMG/M
3300014498|Ga0182019_10893340All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes640Open in IMG/M
3300014502|Ga0182021_10063904All Organisms → cellular organisms → Archaea4278Open in IMG/M
3300014502|Ga0182021_10131039All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota2914Open in IMG/M
3300014502|Ga0182021_10143022Not Available2783Open in IMG/M
3300014502|Ga0182021_10206668All Organisms → cellular organisms → Archaea2294Open in IMG/M
3300014502|Ga0182021_10278395All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → unclassified Gallionella → Gallionella sp.1966Open in IMG/M
3300014502|Ga0182021_10486417Not Available1471Open in IMG/M
3300014502|Ga0182021_10531130All Organisms → cellular organisms → Archaea → TACK group1404Open in IMG/M
3300014502|Ga0182021_10797683All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1134Open in IMG/M
3300014502|Ga0182021_12890228Not Available576Open in IMG/M
3300014502|Ga0182021_12916598Not Available574Open in IMG/M
3300014502|Ga0182021_13621467Not Available513Open in IMG/M
3300017935|Ga0187848_10218986Not Available812Open in IMG/M
3300017944|Ga0187786_10295443Not Available662Open in IMG/M
3300017974|Ga0187777_10220304Not Available1282Open in IMG/M
3300018019|Ga0187874_10018038All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3771Open in IMG/M
3300018029|Ga0187787_10112490All Organisms → cellular organisms → Archaea886Open in IMG/M
3300018068|Ga0184636_1199738Not Available708Open in IMG/M
3300018089|Ga0187774_11231943All Organisms → cellular organisms → Archaea → TACK group538Open in IMG/M
3300022555|Ga0212088_10022552All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon8296Open in IMG/M
3300024240|Ga0224522_1045144All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1084Open in IMG/M
3300025313|Ga0209431_10140871All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1908Open in IMG/M
3300025444|Ga0208189_1050410Not Available790Open in IMG/M
3300025582|Ga0209386_1030433All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon994Open in IMG/M
3300025865|Ga0209226_10258086All Organisms → cellular organisms → Archaea → TACK group745Open in IMG/M
3300025888|Ga0209540_10339875All Organisms → cellular organisms → Archaea → TACK group840Open in IMG/M
3300025888|Ga0209540_10379845Not Available777Open in IMG/M
3300025891|Ga0209585_10016983All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2631Open in IMG/M
3300025891|Ga0209585_10031209All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1943Open in IMG/M
3300025891|Ga0209585_10142406Not Available923Open in IMG/M
3300025891|Ga0209585_10263498Not Available685Open in IMG/M
3300025891|Ga0209585_10487986Not Available512Open in IMG/M
3300025967|Ga0210136_1080243All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon522Open in IMG/M
3300025978|Ga0210092_1021860Not Available879Open in IMG/M
3300025980|Ga0210137_1038439Not Available680Open in IMG/M
3300026273|Ga0209881_1188008Not Available516Open in IMG/M
(restricted) 3300026366|Ga0255362_1011424Not Available703Open in IMG/M
3300027731|Ga0209592_1255629Not Available607Open in IMG/M
3300027743|Ga0209593_10069211All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1331Open in IMG/M
3300027743|Ga0209593_10109689All Organisms → cellular organisms → Archaea1011Open in IMG/M
3300027818|Ga0209706_10492408Not Available561Open in IMG/M
3300027877|Ga0209293_10259237All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon872Open in IMG/M
3300027887|Ga0208980_10152616All Organisms → cellular organisms → Archaea → TACK group1353Open in IMG/M
3300027887|Ga0208980_10669048Not Available589Open in IMG/M
3300027896|Ga0209777_10056561All Organisms → cellular organisms → Archaea3511Open in IMG/M
3300027902|Ga0209048_10220103All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_16_48_131369Open in IMG/M
3300027902|Ga0209048_10554470Not Available770Open in IMG/M
3300027979|Ga0209705_10642014Not Available504Open in IMG/M
3300028800|Ga0265338_10121437All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2082Open in IMG/M
3300029442|Ga0239579_1022805All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1070Open in IMG/M
3300031949|Ga0214473_12166259All Organisms → cellular organisms → Archaea537Open in IMG/M
3300033433|Ga0326726_10293768All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota1523Open in IMG/M
3300033433|Ga0326726_10971209Not Available825Open in IMG/M
3300033433|Ga0326726_11213781Not Available734Open in IMG/M
3300033482|Ga0316627_101425519Not Available697Open in IMG/M
3300033513|Ga0316628_101865668Not Available799Open in IMG/M
3300033521|Ga0316616_101087547Not Available1006Open in IMG/M
3300033743|Ga0334844_108742Not Available548Open in IMG/M
3300033825|Ga0334843_047725All Organisms → cellular organisms → Archaea → TACK group601Open in IMG/M
3300034169|Ga0370480_0086806Not Available1081Open in IMG/M
3300034169|Ga0370480_0122563Not Available893Open in IMG/M
3300034169|Ga0370480_0169312All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon744Open in IMG/M
3300034281|Ga0370481_0110271All Organisms → cellular organisms → Archaea930Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil14.16%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland13.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment12.39%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen12.39%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands7.96%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment3.54%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands3.54%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.54%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil3.54%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.54%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil3.54%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.65%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.65%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.77%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.77%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.89%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.89%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.89%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.89%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000030Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 BulkEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300004066Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004072Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2EnvironmentalOpen in IMG/M
3300004078Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2EnvironmentalOpen in IMG/M
3300004079Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2EnvironmentalOpen in IMG/M
3300005213Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2EnvironmentalOpen in IMG/M
3300005216Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2EnvironmentalOpen in IMG/M
3300005219Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006636Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-twoEnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014316Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1EnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300024240Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025444Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025496Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025582Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)EnvironmentalOpen in IMG/M
3300025865Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300025967Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025978Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025980Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026273Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)EnvironmentalOpen in IMG/M
3300026366 (restricted)Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T75.r2EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300029442Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM13EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033743Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9EnvironmentalOpen in IMG/M
3300033825Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WSSedB1B_04214223300000030WetlandMSLEAEKTELIAAMHALEEFVKILVNEYPLIFKDGSSVIKIGPSIKKQFFPYEASLEIKKQV*
JGIcombinedJ13530_10523008413300001213WetlandEEIQFIQAMNALEEFVKILIKEYPLVFKDGSGGIKLSPSPQKPFFPYEASLEIKKKK*
JGI20214J51088_1005220943300003432WetlandMFSEPEKTQYLQAMHALEEFVKILVAEYPLVFKDGSGVIEISSSTKKQFFPYEASINIKKIIDKE*
JGI20214J51088_1005752033300003432WetlandMSSKPEETQYLQAMHALEEFVKILVAEYPLVFKAGSGIVEINPSTKKQFFPYEASINIKKIDKE*
JGI20214J51088_1009040733300003432WetlandMDMSLEAEKTELIAAMHALEEFVKILVNEYPLIFKDGSSVIKIGPSIKKQFFPYEASLEIKKQV*
JGI20214J51088_1010785723300003432WetlandMSSELEETQYLQAMHALEEFVKILVAEYPLVFKDGSGVIEISPSTNKEFFPYEASINIKKIIDKK*
JGI20214J51088_1012222733300003432WetlandMSSEAEKTEFVQAMHALEEFVKILVKEYPLVFKDGSGTINISPSTKKQFFPYEASLKISKKK*
JGI20214J51088_1070162023300003432WetlandMSSELEETQYIQAMHALEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK*
JGI20214J51650_1005211523300003541WetlandVIEMSSELEETQYIQAMHALEEFIKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK*
JGI20214J51650_1019437153300003541WetlandHALEEFVKILVAEYPLVFKDGSGVIEISPSTNKEFFPYEASINIKKIIDKK*
JGI20214J51650_1028476213300003541WetlandMSSAPEERQYLQAMHALEEFVKILVAEYSLVFKDGSGVIEISSSANNRFFPYEASINIKKIIDKE*
JGI20214J51650_1042054023300003541WetlandMFSEPEKTQYLQAMHALEEFVKILVVEYPLVFKDGSGVVEISSSTKKQFFPYEASINIKKIIDKE*
JGI20214J51650_1096334713300003541WetlandMHALEEFVKILVAEYPLVFKDGSGVIEISSSANNRFFPYEASINIKKIIDKE*
Ga0031655_1002806153300003852Freshwater Lake SedimentLSSEPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE*
Ga0055484_1000956223300004066Natural And Restored WetlandsAQKTELLAAKHALEEFVKILVNEYPLIFKDETAKIKIDPSIEKQFFPFEASLEIKKQK*
Ga0055512_1004043223300004072Natural And Restored WetlandsETQYIQAMHALEEFIKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK*
Ga0055513_1014318723300004078Natural And Restored WetlandsHALEEFVKILVAEYPLVFKDGSGVIEISSSTKKQFFPYEASINIKKIIDKE*
Ga0055514_1000051533300004079Natural And Restored WetlandsMSSEPEKTQYLQAMHALEEFVKILVAEYPLVFKDGSGVIEISSSTKKQFFPYEASINIKKIIDKE*
Ga0068998_1003990523300005213Natural And Restored WetlandsMSSETEKTQYVQAMHALEEFVKILVVEYPLVFKNGSGAIEISSSTKKQFFPYEASINIRKIIEKEWVT*
Ga0068994_1025108813300005216Natural And Restored WetlandsMSSEAQKTELLAAKHALEEFVKILVNEYPLIFKDGSAEIKIDPSIEKQFFPFEASLEIKKQK*
Ga0069004_1003996323300005219Natural And Restored WetlandsMSSELEETQYLQAMHALEEFVKILVAEYPLVFKDGSGVIEISPSTNEEFFPYEASINIKKIIDKK*
Ga0079037_10024164223300006224Freshwater WetlandsMPSEVEEIQFNRAMHALQEFVKILVKEYPLVFKDGSGSIKISPSTQQPFFPYEASLEIRKKK*
Ga0079037_10030453123300006224Freshwater WetlandsMSSEAQKTQLLAAKHALEEFVKILVNEYPLIFKDGSTEIKIDPSIEKQFFPFEASLEIKKQK*
Ga0075525_1003485523300006636Arctic Peat SoilMSSEAEKTELTAAMHALEEFVKILVNEYPLIFKDDSSIIKIGPSIKKQFFPYEASLEIRKQK*
Ga0075525_1007955423300006636Arctic Peat SoilMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE*
Ga0066797_110277223300006864SoilMSSEAEETEFIQAMHALEEFVKILVKEYPLVFKDGSGAIKISPSIKKQFFPYEASLKIRKKK*
Ga0075528_1012131013300006949Arctic Peat SoilMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINI
Ga0075524_1001038823300006950Arctic Peat SoilLSSKPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE*
Ga0075524_1001249943300006950Arctic Peat SoilMSLEAEKTELKAAMHALEEFVKILVNEYPLIFKDGSRVIKIGPSINKQFFPYEASLEIKKQL*
Ga0075524_1003477763300006950Arctic Peat SoilLSSKPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINISKKE*
Ga0075524_1008879523300006950Arctic Peat SoilMPSETEEIQITQATHALEEFVRILVREYPLVFKDGSGGIKISPSIQQPLFFPYEASLEIKKKK*
Ga0105095_1040654623300009053Freshwater SedimentMYSEAEKTELLAAKHALEEFVKILVNEYPLIFKDGSAEIKIDPSIEKQFFPFEASLEIKKQK*
Ga0105106_1005322423300009078Freshwater SedimentMSSESEKTELIAAKHALEEFVKILVNEYPLIFKDGSAEIKIDPSIEKQFFPFEASLEIRKQK*
Ga0105103_1010639923300009085Freshwater SedimentMVSITPVIEMSSEPKETQYSQAMHTLEEFVKILVVEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK*
Ga0105107_1021396913300009087Freshwater SedimentMYSEAEKTELLAAKHALEEFVKILVNEYPLIFKDGSAKIKIDPSIEKQFFPFEASLEIKKQK*
Ga0105094_1027863423300009153Freshwater SedimentMSSEPEEIQYVQARYAFEEFVKILVVEYPLVFKDGSGVIEINPSTKKQFFPYEASINIRKIIEK*
Ga0105102_1027895923300009165Freshwater SedimentMSSEAEKTELLAAKHALEEFVKILVNEYPLIFKDGSAEIKIDPSIEKQFFPFEASLEIKKQK*
Ga0105100_1011044123300009166Freshwater SedimentMVSITPVIEMSSEPKETQYIQAMHTLKEFVKILVVEYPLVFKDGSGDIEISPLTKEQFFPYEASIRIRKKK*
Ga0113563_1132083913300009167Freshwater WetlandsVTELPSEVEEIQFNRAMHALQEFVKILVKEYPLVFKDGSGSIKISPSTQQPFFPYEASLEIRKKK*
Ga0113563_1178415413300009167Freshwater WetlandsMSSEAQKTQLLAAKHALEEFVKILVNEYPLIFKDGSTEIKIDPSIEKQFFPFEAY
Ga0105104_1011241023300009168Freshwater SedimentMSSESEKNQHTQAMHTLEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK*
Ga0105101_1022924013300009171Freshwater SedimentMPLDAEDTEINQAMHALEEFVKILVNEYPLVFKDGSGVIKISPSSKKQFFPYEASLEIRKQK*
Ga0116114_106240723300009630PeatlandMSSEGKETEFIQAANALEEFIKILVKEYPLVFKEGSGAINIRSSKKEHSFPYEVSLKIRKKE*
Ga0074046_1002360623300010339Bog Forest SoilMSSEGKETEFIQASNALEEFIKILVKEYPLVFKEGSGAINISSSNKEHSFPYEVSLKIRKKE*
Ga0181538_1026322823300014162BogSEGKETEFIQAANALEEFIKILVKEYPLVFKEGSGAINIRSSKKEHSFPYEVSLKIRKKE
Ga0075339_109799113300014316Natural And Restored WetlandsTELLAAKHALEEFVKILVNEYPLIFKDETAKIKIDPSIEKQFFPFEASLEIKKQK*
Ga0182017_1094026123300014494FenMIMSLEAEKNELIAAMHALEEFVKILVNEYPLIFKEGSSFIKIGPSINKQFFP
Ga0182019_1009270013300014498FenMIMSLEAEKNELIAAMHALEEFVKILVNEYPLIFKEGSSFIKIGPSINKQFFPYEASLEIKKQK*
Ga0182019_1089334023300014498FenMSSEAEKTEFIQAMHALEEFVKILVNEYPLVFKDGSGIIKISPSIKKQFFPYEASLKIKKIQ*
Ga0182021_1006390443300014502FenMSLEPEETQYIAAMHALEEFVKILVVEYPLVFKDKSGDIEISPSTKKQFFPYEASIRIRKKK*
Ga0182021_1013103943300014502FenMSSELEETQYIQAMHALEEFVKILVAEYPLVFKDGSGDIEVSPSTKEQFFPYEASIRIRKKK*
Ga0182021_1014302233300014502FenMSSEAEKSELKAAMHALEEFVKILVNEYPLIFKDGSNIIKIGPSTKKQFFPYEASLEIKKQK*
Ga0182021_1020666823300014502FenMPSETEEIQVIQATQALEEFVRILVREYPLVFKDGSGGIKISPSIQQPLFFPYEASLEIKKKK*
Ga0182021_1027839523300014502FenRCMIMSLEAEKNELIAAMHALEEFVKILVNEYPLIFKEGSSFIKIGPSINKQFFPYEASLEIKKQK*
Ga0182021_1048641723300014502FenMPSEEEETELIQAISALEEFVKILVKEYPLVFKDGSGAITLGPSIEKQFFPYEASLKIKKT*
Ga0182021_1053113033300014502FenMSLEAEKTEYIAASHALEEFVKILVNEYPLIFKDGVGVIKVDPSIKKQFFPYEASLEIKKQK*
Ga0182021_1079768323300014502FenVPSDAEEIQFIQAMNALEEFVKILIKEYPLVFKDGSGGIKISPSSEHPFFPCEVSLEVKKKR*
Ga0182021_1289022813300014502FenMSSDAEKTEMLAAMHALEEFVKILVNEYPLVFKDGSNTIKIGPSTKKQFFPYEVSLEIKKQK*
Ga0182021_1291659813300014502FenRCMIMSLEAEKNELIAAMHALEEFVKILVNEYPLIFKEGSSVIKIGPSTKKQFFPYEASLEIKKQK*
Ga0182021_1362146713300014502FenMRSDAEEIQFSQAMHALEEFVKIIVKEYPLVFKDGSGTVKIYPSLQQPFFPYEAYLDIKKRNRV*
Ga0187848_1021898613300017935PeatlandMSSEGKETEFIQAANALEEFIKILVKEYPLVFKEGSGAINIRSSKKEHSFPYEVSLKIRKKE
Ga0187786_1029544313300017944Tropical PeatlandMSSDPEENQNVQAMHALEEFVKILVAEYPLVFKNGSGVIEISSSAKKQFFPYEASINIRKIIEKEG
Ga0187777_1022030423300017974Tropical PeatlandMSSDTEKNEMVAAMHALEEFVKILVNEYPLVFKDGSNIIKIGPSTRKQFFPYEASLEIKKQK
Ga0187874_1001803863300018019PeatlandMSSEGEETEFIQAANALEEFVKILVKEYPLVFKEGSGAIKIRSSIKERFFPYEVSLKIRKKK
Ga0187787_1011249033300018029Tropical PeatlandMSSDPEENQYVQAMHALEEFVKILVAEYPLVFKNGSGVIEISSSAKKQFFPYEASINIRKIIEKEG
Ga0184636_119973813300018068Groundwater SedimentMSLEPEETQYLQAMHALEEFVKILVKEYPLVFKDGSGVIEIGPSTKEQFFPYEASIRIRKKK
Ga0187774_1123194323300018089Tropical PeatlandMSSDPEENQYVQAMHALEEFVEILVAEYPLVFKNGSVVIEISSSAKKQFFPYEASINIRKIIEKEG
Ga0212088_1002255263300022555Freshwater Lake HypolimnionLSSEPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE
Ga0224522_104514413300024240SoilYIAASHALEEFVKILVNEYPLIFKDGVGVIKVDPSIKKQFFPYEASLEIKKQK
Ga0209431_1014087113300025313SoilMVSITSVIEMSSEPEETQYIQAKHTLEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKK
Ga0208189_105041023300025444PeatlandIQAANALEEFIKILVKEYPLVFKEGSGAINIRSSKKEHSFPYEVSLKIRKKE
Ga0208191_110650023300025496PeatlandAANALEEFIKILVKEYPLVFKEGSGAINIRSSKKEHSFPYEVSLKIRKKE
Ga0209386_103043323300025582Arctic Peat SoilMSSEAEKTELTAAMHALEEFVKILVNEYPLIFKDDSSIIKIGPSIKKQFFPYEASLEIRKQK
Ga0209226_1025808623300025865Arctic Peat SoilLSSEPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFRYEASINIRKKE
Ga0209540_1033987513300025888Arctic Peat SoilMPSESEETEFIQAMHALEEFVKILVNEYPLVFKDGSGVIKIGPSSKKQFFPYEASLEIIKQK
Ga0209540_1037984513300025888Arctic Peat SoilNRCGHRLKGKNGINIDLVIEMSSETEKTELIAAMNALEEFVKILVNEYPLVFKDGSSVIKIGSSIKKQFFPYEASLEIRKQK
Ga0209585_1001698323300025891Arctic Peat SoilMSLEAEKTELKAAMHALEEFVKILVNEYPLIFKDGSRVIKIGPSINKQFFPYEASLEIKKQL
Ga0209585_1003120913300025891Arctic Peat SoilMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE
Ga0209585_1014240613300025891Arctic Peat SoilLSSKPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE
Ga0209585_1026349823300025891Arctic Peat SoilMPSETEEIQITQATHALEEFVRILVREYPLVFKDGSGGIKISPSIQQPLFFPYEA
Ga0209585_1048798613300025891Arctic Peat SoilMSLEAEKTELTAAMHALEEFVKILVNEYPLIFKDGSSIIKIGPSIKKQFFPYEASLEIRKQK
Ga0210136_108024313300025967Natural And Restored WetlandsMSSAPEERQYLQAMHALEEFVKILVAEYSLVFKDGSGVIEISSSANNRFFPYEASINIKKIIDKE
Ga0210092_102186013300025978Natural And Restored WetlandsMSSELEETQYIQAMHALEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK
Ga0210137_103843913300025980Natural And Restored WetlandsMDMSLEAEKTELIAAMHALEEFVKILVNEYPLIFKDGSSVIKIGPSIKKQFFPYEASLEIKKQV
Ga0209881_118800813300026273SoilMSSEAEETEFIQAMHALEEFVKILVKEYPLVFKDGSGAIKISPSIKKQFFPYEASLKIRKKK
(restricted) Ga0255362_101142413300026366SoilMSSEAEKTEFIQAMHALEEFVKILVNEYPLVFKDGSGIIKISPSIKKQFFPYEASLKIKKIQ
Ga0209592_125562923300027731Freshwater SedimentMPSDAEETEINQAMHALEEFVKILVNEYPLVFKDGSGVIKISPSSKKQFFPYEASLEIRKQK
Ga0209593_1006921133300027743Freshwater SedimentQHTQAMHTLEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK
Ga0209593_1010968913300027743Freshwater SedimentMSSESEKNQHTQAMHTLEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRK
Ga0209706_1049240813300027818Freshwater SedimentMYSEAEKTELLAAKHALEEFVKILVNEYPLIFKDGSAKIKIDPSIEKQFFPFEASLEIKKQK
Ga0209293_1025923723300027877WetlandMSSEAQKTQLLAAKHALEEFVKILVNEYPLIFKDGSTEIKIDPSIEKQFFPFEASLEIKKQK
Ga0208980_1015261623300027887WetlandMSSETEKTQYVQAMHALEEFVKILVVEYPLVFKNGSGAIEISSSTKKQFFPYEASINIRKIIEKEWVT
Ga0208980_1066904833300027887WetlandEPEETQYLQAMHALEEFVKILVAEYPLVFKDGSGVVEISSSTKKQFFPYEDSINIKKIIDKE
Ga0209777_1005656153300027896Freshwater Lake SedimentMSTETEKTELTAAMHALEEFVKILINEYPLVFKDGSSIIKIGPSTKKQFFPYEASLEIRKVK
Ga0209048_1022010323300027902Freshwater Lake SedimentMSALEEFVKILIREYPLVFKDGSGGIKISPSVQHPFFPYEASLEIKKKK
Ga0209048_1055447013300027902Freshwater Lake SedimentVLSLEAEELQFIQAMHALEEFVKILVNEYPLVFKDGSGVIKISPSIKEQFFPYAASIKIEKKKYRKRASKGR
Ga0209705_1064201413300027979Freshwater SedimentMSSESEKTELIAAKHALEEFVKILVNEYPLIFKDGSAEIKIDPSIEKQFFPFEASLEIRKQK
Ga0265338_1012143723300028800RhizosphereMSSDAEKTEMLAAMHALEEFVKILVNEYPLVFKDGSNTIKIGPSTKKQFFPYEVSLEIKKQK
Ga0239579_102280533300029442Freshwater LakePEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE
Ga0214473_1216625923300031949SoilMVSITSVIEMSSEPEETQYIQAMHTLEEYVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKK
Ga0326726_1029376823300033433Peat SoilMSSDAEKTELLAAAHALEEFVKILVNEYPLIFKDGSGVIKIGSSIKEIIFPYEASLEIKKKK
Ga0326726_1097120913300033433Peat SoilMPSETEEIQITQATHALEEFVRILVREYPLVFKDGSGSIKISPSIQQPLFFPYQASLEIKKKK
Ga0326726_1121378123300033433Peat SoilMSSEPEKTQYLQAMHALEEFVKILVAEYPLVFKDGSGVIEISSSTKKQFFPYEASINIKKIIDKE
Ga0316627_10142551913300033482SoilMVSITPVIEMSSEPKETQYSQAMHTLEEFVKILVVEYPLVFKDGSGNIEISPSTEEQFFPYEASIRIRKKK
Ga0316626_1108919413300033485SoilVTELPSEVEEIQFNRAMHALQEFVKILVKEYPLVFKDGSGSIKISPSTQQPFFPYEASLEIRKKK
Ga0316628_10186566823300033513SoilMPSETEEIQFIQAIHAFEEFVKILVKEYPLVFKDGTGGIKVNPSIQQPFFPYEASLEIKLQK
Ga0316616_10108754713300033521SoilMSSEAQKTQLLAAKHALEEFVKILVNEYPLIFKDGSTEIKIDPSIEKQ
Ga0334844_108742_281_4693300033743SoilMSSEAEKTQYTQAMHALEEFVKILVVEYPLVFKDGSGDLKIGSSIDKKFFPYDVSIKIKKKK
Ga0334843_047725_2_1423300033825SoilLEEFVKILVVEYPLVFKDGSGDLKIGSSIDKKFFPYDVSIKIKKKK
Ga0370480_0086806_443_6673300034169Untreated Peat SoilVIELSSEPEEIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIKIIPSTEKQFFPYEASISIRKKSEFQNRELQK
Ga0370480_0122563_684_8723300034169Untreated Peat SoilLSSEPEKIQYIQAMHALEEFVKILVVEYPLVFKDGSGVIEISPSTKKQFFPYEASINIRKKE
Ga0370480_0169312_174_3683300034169Untreated Peat SoilMKMSSEAEKTELTAAMHALEEFVKILVNEYPLIFKDGSSIIKIGPSIKKQFFPYEASLEIRKQK
Ga0370481_0110271_113_3463300034281Untreated Peat SoilMLKGKLGLSIALVIEMPSEFEETQYIQAMHALEEFVKILVAEYPLVFKDGSGDIEISPSTKEQFFPYEASIRIRKKK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.