Metagenome Family F082888

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082888
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	87 residues
Representative Sequence	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSETAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIIKN
Number of Associated Samples	58
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.11 %
% of genes near scaffold ends (potentially truncated)	21.24 %
% of genes from short scaffolds (< 2000 bps)	56.64 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces (44.248 % of family members)
Environment Ontology (ENVO)	Unclassified (97.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut (53.982 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.91% β-sheet: 20.00% Coil/Unstructured: 46.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.55.1.1: Ribosomal protein L22	d1vq8r1	1vq8	0.6088
d.55.1.1: Ribosomal protein L22	d1i4ja_	1i4j	0.56539
d.54.1.0: automated matches	d4hcha1	4hch	0.55201
b.62.1.0: automated matches	d4r3fa_	4r3f	0.55186
b.62.1.0: automated matches	d2mvza_	2mvz	0.55114

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00583	Acetyltransf_1	6.19
PF05958	tRNA_U5-meth_tr	4.42
PF01381	HTH_3	2.65
PF02698	DUF218	1.77
PF14311	DUF4379	1.77
PF13673	Acetyltransf_10	1.77
PF03575	Peptidase_S51	1.77
PF13508	Acetyltransf_7	1.77
PF12850	Metallophos_2	1.77
PF07963	N_methyl	1.77
PF13421	Band_7_1	0.88
PF04993	TfoX_N	0.88
PF10688	Imp-YgjV	0.88
PF13847	Methyltransf_31	0.88
PF00293	NUDIX	0.88
PF14542	Acetyltransf_CG	0.88
PF04138	GtrA	0.88
PF04343	DUF488	0.88
PF00383	dCMP_cyt_deam_1	0.88
PF00578	AhpC-TSA	0.88
PF01746	tRNA_m1G_MT	0.88
PF00156	Pribosyltran	0.88
PF06541	ABC_trans_CmpB	0.88
PF01966	HD	0.88
PF00535	Glycos_transf_2	0.88
PF12698	ABC2_membrane_3	0.88
PF06782	UPF0236	0.88
PF13302	Acetyltransf_3	0.88
PF02195	ParBc	0.88
PF02129	Peptidase_S15	0.88
PF08713	DNA_alkylation	0.88
PF00313	CSD	0.88
PF00239	Resolvase	0.88
PF06415	iPGM_N	0.88
PF04015	DUF362	0.88
PF02016	Peptidase_S66	0.88
PF02517	Rce1-like	0.88
PF00265	TK	0.88
PF04026	SpoVG	0.88
PF16321	Ribosom_S30AE_C	0.88
PF00437	T2SSE	0.88
PF13711	DUF4160	0.88
PF00006	ATP-synt_ab	0.88
PF13238	AAA_18	0.88
PF04545	Sigma70_r4	0.88
PF00132	Hexapep	0.88
PF04397	LytTR	0.88
PF01931	NTPase_I-T	0.88
PF02580	Tyr_Deacylase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	4.42
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	1.77
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	1.77
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	0.88
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	0.88
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.88
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.88
COG1986	Non-canonical (house-cleaning) NTP pyrophosphatase, all-alpha NTP-PPase family	Defense mechanisms [V]	0.88
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.88
COG2088	DNA- and RNA-binding protein SpoVG, cell septation regulator	Transcription [K]	0.88
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.88
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.88
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.88
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.88
COG4905	Uncharacterized membrane protein	Function unknown [S]	0.88
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	84.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	72.57 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	71.68 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	49.56 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	5.31 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.88 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	49.56 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	5.31 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.88 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	49.56 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples	1.77 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	1.77 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → environmental samples	0.88 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	49.56 %
Clostridium sp. CAG:780	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:780	1.77 %
Clostridium sp. 26_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. 26_22	0.88 %
Clostridium sp. CAG:245_30_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. CAG:245_30_32	0.88 %
Bacillus sp. CAG:988	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → environmental samples → Bacillus sp. CAG:988	0.88 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2061766007\|rumenHiSeq_NODE_4363444_len_15083_cov_0_618113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15133	Open in IMG/M
2061766007\|rumenHiSeq_NODE_4372229_len_9075_cov_0_286281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9125	Open in IMG/M
2061766007\|rumenHiSeq_NODE_925282_len_85689_cov_1_780485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	85739	Open in IMG/M
2075704000\|RmDRAFT_ConsensusfromContig252730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	571	Open in IMG/M
3300002597\|DRAFT_11076140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	916	Open in IMG/M
3300004151\|Ga0066602_10003744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8253	Open in IMG/M
3300004154\|Ga0066603_10007707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5112	Open in IMG/M
3300006099\|Ga0080690_1018576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1014	Open in IMG/M
3300006133\|Ga0080694_1000866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11479	Open in IMG/M
3300006154\|Ga0081175_1050076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	535	Open in IMG/M
3300006201\|Ga0081180_1013973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1223	Open in IMG/M
3300006213\|Ga0081460_1147099	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300006217\|Ga0081461_1028170	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300009666\|Ga0116182_1216001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	840	Open in IMG/M
3300009670\|Ga0116183_1430034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	545	Open in IMG/M
3300009871\|Ga0130077_14169780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	775	Open in IMG/M
3300010282\|Ga0129307_1000677	All Organisms → cellular organisms → Bacteria	48492	Open in IMG/M
3300011005\|Ga0139361_1171830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	593	Open in IMG/M
3300011008\|Ga0139362_1051594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3347	Open in IMG/M
3300011008\|Ga0139362_1352291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	857	Open in IMG/M
3300012983\|Ga0123349_10117999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1822	Open in IMG/M
3300012983\|Ga0123349_10377998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	980	Open in IMG/M
3300012983\|Ga0123349_10521244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	829	Open in IMG/M
3300012983\|Ga0123349_11028403	Not Available	588	Open in IMG/M
3300018427\|Ga0187903_10157055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	2078	Open in IMG/M
3300018427\|Ga0187903_10605091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	852	Open in IMG/M
3300018427\|Ga0187903_10656338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	806	Open in IMG/M
3300018430\|Ga0187902_10885769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	713	Open in IMG/M
3300018430\|Ga0187902_10914523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	699	Open in IMG/M
3300018430\|Ga0187902_11504302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	509	Open in IMG/M
3300018475\|Ga0187907_10107839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	4097	Open in IMG/M
3300018475\|Ga0187907_10235392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2363	Open in IMG/M
3300018475\|Ga0187907_10256171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	2228	Open in IMG/M
3300018475\|Ga0187907_10931796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → environmental samples → Bacillus sp. CAG:988	920	Open in IMG/M
3300018493\|Ga0187909_10362697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1593	Open in IMG/M
3300018494\|Ga0187911_10090929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4392	Open in IMG/M
3300018494\|Ga0187911_10099253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	4125	Open in IMG/M
3300018494\|Ga0187911_10210500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2456	Open in IMG/M
3300018494\|Ga0187911_10597261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1235	Open in IMG/M
3300018494\|Ga0187911_11121973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	814	Open in IMG/M
3300018494\|Ga0187911_11385691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	706	Open in IMG/M
3300018494\|Ga0187911_11723398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	611	Open in IMG/M
3300018495\|Ga0187908_10151002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. 26_22	3116	Open in IMG/M
3300018495\|Ga0187908_11257732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	730	Open in IMG/M
3300018495\|Ga0187908_11445340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	664	Open in IMG/M
3300018878\|Ga0187910_10116136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	4172	Open in IMG/M
3300018878\|Ga0187910_10155696	All Organisms → cellular organisms → Bacteria	3394	Open in IMG/M
3300018878\|Ga0187910_10294221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2185	Open in IMG/M
3300018878\|Ga0187910_11271621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	811	Open in IMG/M
3300018878\|Ga0187910_11691183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	668	Open in IMG/M
3300018878\|Ga0187910_11929080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	611	Open in IMG/M
3300019373\|Ga0187895_1000027	All Organisms → cellular organisms → Bacteria	231653	Open in IMG/M
3300021254\|Ga0223824_10004978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	14056	Open in IMG/M
3300021254\|Ga0223824_11038580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	589	Open in IMG/M
3300021254\|Ga0223824_11157098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	541	Open in IMG/M
3300021255\|Ga0223825_10090093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	183357	Open in IMG/M
3300021256\|Ga0223826_10003101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	24085	Open in IMG/M
3300021387\|Ga0223845_10007332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9211	Open in IMG/M
3300021387\|Ga0223845_10474972	All Organisms → cellular organisms → Bacteria	3665	Open in IMG/M
3300021387\|Ga0223845_11724704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1880	Open in IMG/M
3300021399\|Ga0224415_10003194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	18481	Open in IMG/M
3300021399\|Ga0224415_10043896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4129	Open in IMG/M
3300021399\|Ga0224415_10115209	All Organisms → cellular organisms → Bacteria	2483	Open in IMG/M
3300021399\|Ga0224415_10370265	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300021399\|Ga0224415_10701520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	800	Open in IMG/M
3300021400\|Ga0224422_10190822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	15472	Open in IMG/M
3300021400\|Ga0224422_10559416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1271	Open in IMG/M
3300021400\|Ga0224422_10874961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3051	Open in IMG/M
3300021400\|Ga0224422_11801368	All Organisms → cellular organisms → Bacteria	10710	Open in IMG/M
3300021400\|Ga0224422_12319908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	541	Open in IMG/M
3300021400\|Ga0224422_12786621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2604	Open in IMG/M
3300021426\|Ga0224482_10001908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	30991	Open in IMG/M
3300021426\|Ga0224482_10283821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1436	Open in IMG/M
3300021431\|Ga0224423_10021072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6733	Open in IMG/M
3300022589\|Ga0216346_10130304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1857	Open in IMG/M
3300022660\|Ga0216342_10960272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	656	Open in IMG/M
3300022661\|Ga0216339_10106244	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300022661\|Ga0216339_10465749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1106	Open in IMG/M
3300022753\|Ga0216341_10623952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	834	Open in IMG/M
3300024268\|Ga0257090_10125032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3472	Open in IMG/M
3300024268\|Ga0257090_10364717	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300024268\|Ga0257090_10405786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1570	Open in IMG/M
3300024268\|Ga0257090_10970371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	888	Open in IMG/M
3300024268\|Ga0257090_11372816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	705	Open in IMG/M
3300024269\|Ga0257076_10477186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1424	Open in IMG/M
3300024272\|Ga0257077_10325663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1976	Open in IMG/M
3300024303\|Ga0257089_10281288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1856	Open in IMG/M
3300024303\|Ga0257089_10356283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1595	Open in IMG/M
3300027719\|Ga0209467_1003724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9657	Open in IMG/M
3300028242\|Ga0302102_10126336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	2209	Open in IMG/M
3300028242\|Ga0302102_10328695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. CAG:245_30_32	1189	Open in IMG/M
3300028591\|Ga0247611_10004685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	18748	Open in IMG/M
3300028591\|Ga0247611_10029577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	5673	Open in IMG/M
3300028591\|Ga0247611_11755843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	590	Open in IMG/M
3300028805\|Ga0247608_10003270	All Organisms → cellular organisms → Bacteria	19101	Open in IMG/M
3300028805\|Ga0247608_10003460	All Organisms → cellular organisms → Bacteria	18396	Open in IMG/M
3300028833\|Ga0247610_11229063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	740	Open in IMG/M
3300028886\|Ga0256407_10012372	All Organisms → cellular organisms → Bacteria	11616	Open in IMG/M
3300028914\|Ga0265300_10893559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	597	Open in IMG/M
3300029305\|Ga0307249_10013153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	56744	Open in IMG/M
3300029305\|Ga0307249_10427906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	3032	Open in IMG/M
3300029305\|Ga0307249_10431754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:780	3009	Open in IMG/M
3300029305\|Ga0307249_11194159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1319	Open in IMG/M
3300030772\|Ga0061013_12498773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1939	Open in IMG/M
3300031085\|Ga0061018_14169780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	775	Open in IMG/M
3300031555\|Ga0318466_11059164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:780	1361	Open in IMG/M
3300031555\|Ga0318466_11950991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	819	Open in IMG/M
3300031992\|Ga0310694_10194054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2058	Open in IMG/M
3300031993\|Ga0310696_10229824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2024	Open in IMG/M
3300031994\|Ga0310691_10354701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1619	Open in IMG/M
3300031998\|Ga0310786_10669430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1161	Open in IMG/M
3300031998\|Ga0310786_11084894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	869	Open in IMG/M
3300032007\|Ga0310695_10755168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	95.58%
Environmental	Environmental	2.65%
Engineered	Engineered	1.77%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	95.58%
Aquatic	Environmental → Aquatic	2.65%
Wastewater	Engineered → Wastewater	1.77%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	95.58%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.77%

Habitat	Taxonomy	Distribution
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	48.67%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	41.59%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified	5.31%
Pond	Environmental → Aquatic → Freshwater → Pond	2.65%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	48.67%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	39.82%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified	5.31%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.65%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	1.77%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Goat Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces	44.25%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	19.47%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	12.39%
Mouse Feces	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified → Mouse Feces	5.31%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	3.54%
Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.65%
Moose Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Moose Rumen	2.65%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	1.77%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.77%
Capybara Group Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Capybara Group Fecal	0.89%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	0.89%
Camel Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2061766007	Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470	Host-Associated	Open in IMG/M
2075704000	Bovine rumen microbial communities from Vernon, TX, USA, Sample 511	Host-Associated	Open in IMG/M
3300002597	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300006099	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t1_683P_control - viral_metagenome	Host-Associated	Open in IMG/M
3300006133	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t1_693P_control - viral_metagenome	Host-Associated	Open in IMG/M
3300006154	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t30_693M_control - microbial_metagenome	Host-Associated	Open in IMG/M
3300006201	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t30_691P_inflammed - viral_metagenome	Host-Associated	Open in IMG/M
3300006213	Combined Assembly of all intestinal microbial_metagenomes from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA	Host-Associated	Open in IMG/M
3300006217	Combined Assembly of all intestinal viral_metagenomes from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA	Host-Associated	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009871	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Rumen Fluid.Combined Assembly of Gp0148671, Gp0148672	Host-Associated	Open in IMG/M
3300010282	Capybara group fecal microbial communities from Wisconsin, USA - P1105 metagenome	Host-Associated	Open in IMG/M
3300011005	Rumen fluid microbial communities from healthy moose, Palmer, Alaska- post 0.2 um filtrate	Host-Associated	Open in IMG/M
3300011008	Rumen microbial communities from healthy moose, Palmer, Alaska. Combined Assembly of Gp0161001, Gp0160600, Gp0160599, Gp0160598	Host-Associated	Open in IMG/M
3300012983	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 Metagenome	Host-Associated	Open in IMG/M
3300018427	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Reed Canary Grass, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300018430	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300018475	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 1	Host-Associated	Open in IMG/M
3300018493	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3	Host-Associated	Open in IMG/M
3300018494	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2	Host-Associated	Open in IMG/M
3300018495	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2	Host-Associated	Open in IMG/M
3300018878	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1	Host-Associated	Open in IMG/M
3300019373	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Alfalfa, Gen0, Rep 3	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021399	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021426	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300021431	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300022589	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 2, Chloramphenicol (v2)	Host-Associated	Open in IMG/M
3300022660	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2 (v2)	Host-Associated	Open in IMG/M
3300022661	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 (v2)	Host-Associated	Open in IMG/M
3300022753	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 (v2)	Host-Associated	Open in IMG/M
3300024268	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2 Spades (v3)	Host-Associated	Open in IMG/M
3300024269	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 Spades (v3)	Host-Associated	Open in IMG/M
3300024272	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1 Spades (v3)	Host-Associated	Open in IMG/M
3300024303	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 Spades (v3)	Host-Associated	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300028242	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Alfalfa, Gen0, Rep 2, Chloramphenicol (v3)	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300029305	Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.	Host-Associated	Open in IMG/M
3300030772	Coassembly of Cow X Switchgrass	Host-Associated	Open in IMG/M
3300031085	Coassembly of Cow X and Y Rumen Fluid	Host-Associated	Open in IMG/M
3300031555	Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.(v2)	Host-Associated	Open in IMG/M
3300031992	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)	Host-Associated	Open in IMG/M
3300031993	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032007	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04 (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
_HiSeq_02608170	2061766007	Bovine Rumen	MQVIEIVVENKTYKIEWALSEYFDELKGMKFNLNEVTADQIIKMNNLSETAKILLSAVAGAVIQHLIDENCPIDSIFNTGYFNVK
_HiSeq_22952740	2061766007	Bovine Rumen	MQIIEIKVEDKDYQIEWALSEYFDELKGMKFXXXXXXXXXXXXXETAKILLSAVAGAVIQHLIDVNCPIDSIFNKGYFIVKK
_HiSeq_17118880	2061766007	Bovine Rumen	VQIIEIIVNDKSYHIEWSLSEHFGELKGKKFMLNEVAAEQIIKIDNLSETAKILLSAVAGAVIQHLIDINCSIEDIFNTGYFIVKE
RmDRAFT_10895850	2075704000	Bovine Rumen	MSQIIEIIVENKKYQIEWALSEYFGELKGKKFMLNEVAADQIVMIKNLSETAKILLSAVAGAVIQYLIDNNCQISSIFENGYFIIKND
DRAFT_110761402	3300002597	Camel Rumen	MAQIIEINVDNKNYEIEWAISEHFNELKGMKFNLNEVAADQIITINNLSEVAKILLSAVAGAVIQHLIDINVPIDKIFSGYFIVK*
Ga0066602_100037441	3300004151	Freshwater	MTQIIEIIVGDKDYQIKWALSEHFGELKGKKFMLNKMAAEQIVMINNLSDTAKILLSAVAGAVIQYLIDN
Ga0066603_100077072	3300004154	Freshwater	MTQIIEIIVGDKDYQIKWALSEHFGELKGKKFMLNKMAAEQIVMINNLSDTAKILLSAVAGAVIQYLIDNNCQTDNIFESGYFIIKN*
Ga0080690_10185762	3300006099	Mouse Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSNTAKILLSAVAGAVIQHLIDNNCPIDNIFENGYFIVKNFINSNCTTKNINNYSKPI
Ga0080694_100086610	3300006133	Mouse Feces	MSQIIEVIVENKNYQLEWALSEHFEELEGKKFMLNKMAAEQIEMINNLSNTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKNFINSNCTTKNINNYSKPI
Ga0081175_10500761	3300006154	Mouse Feces	MSQIIEVIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSNTAKILLSAVAGAVIQHLIDNNCQMDNIFENGYFIVKN*
Ga0081180_10139732	3300006201	Mouse Feces	MAQIIEIIVENKNYQIEWNLSEYFGELKGKKFMLNKMAAEQIKVVNNLSDTAKILLSAVAGAVIQHLIDNNCPIDNIFENGYFIVKS*I
Ga0081460_11470993	3300006213	Mouse Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIKVINNLSDTAKILLSAVAGAVIQHLIDNNCPIDNIFENGYFIVKSIMNKL
Ga0081461_10281704	3300006217	Mouse Feces	MSQIIEVIVENKNYQIEWALSEHFEELEGKKFMLNKMAAEQIEMINNLSNTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKN*
Ga0116182_12160012	3300009666	Anaerobic Digestor Sludge	KIEWALSEYFDELKGRKYMLNSVAADQIVLINDLSDTAKILLSAVAGAVIQYLIDNNCSIDSIFNNGYFKVI*
Ga0116183_14300341	3300009670	Anaerobic Digestor Sludge	MAQIIEINVDNKEYKIEWALSEYFDELKGRKYMLNSVAADQIVLINDLSDTAKILLSAVAGAVIQYLIDNNCSIDSIFNNGYFKVI*
Ga0130077_141697801	3300009871	Rumen	MKRMENGMSQIIEIIIENKKYQIEWALSEHFGELIGKKFMLNKMAADQIVMINNISETAKILLSAVAGAVIQHLIDNNCQINSIFENGYFIIKNGL*
Ga0129307_100067734	3300010282	Capybara Group Fecal	MEEDNMSQIIEINVENQEYQIEWALSEYFDELKGMKFMLNSVAADQIVMINNLSETAKILLSAVAGAVIQYLIDNNCPIDSIFESGYFIIRK*
Ga0139361_11718301	3300011005	Moose Rumen	MSQIIEIIVENKKYQIEWALSEYFGELTGKKFMLNKMAADQIVMINNISETAKILLSAVAGAVIQHLIDNNCQ
Ga0139362_10515945	3300011008	Moose Rumen	MSQIIEIIVENKKYQIEWALSEYFGELTGKKFMLNKMAADQIVMINNISETAKILLSAVAGAVIQHLIDNNCQINSIFENGYFIIKNDL*
Ga0139362_13522911	3300011008	Moose Rumen	MMQIIEIIVENKKYQIEWALSEHFDELRGMKFMLNKVAADQIVEIEDLSETAKILLSAVAGAVIQYLIDNNCQIDSIFENGYFIIKK*
Ga0123349_101179993	3300012983	Fecal	MAQIIEIIVENKNYQIEWALSEHFGELKGKKFMLNKMAAEQIQMINNLSYTAKILLSAVAGAVIQHLIDNNCQMDKIFENGYFIVKN*
Ga0123349_103779982	3300012983	Fecal	MLQIIEINVENKNYQIEWALSEYFGELKGKKFMINKMAADQIEMINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKN*
Ga0123349_105212441	3300012983	Fecal	KYQIEWALSEYFDELKGMKFMLNEVAANQIVTIDYLSETAKILLSAVAGATIQYLMDNNCPIDSIFENGYFIIKE*
Ga0123349_110284031	3300012983	Fecal	MSQIIEIIVGNNNYQIEWALSEYFGELQGKQYKLNEMAADQIEKLDNLSNTAKLLLSAVAGAVIQHLIDNNCQINEI
Ga0187903_101570551	3300018427	Goat Feces	VENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIGKINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKK
Ga0187903_106050912	3300018427	Goat Feces	MVQIIEIIVGNKNYQIEWALSEYFGELKGKKFMLNKMAADQIEMINNLSETAKILLSAVAGAVIQHLIDNNCQIDSIFENGYFIVKK
Ga0187903_106563381	3300018427	Goat Feces	MSQIIEMMVGNKNYQIEWALSEHFGELKGKKFMLNKMAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFILK
Ga0187902_108857692	3300018430	Goat Feces	MSQIIEIVVEKKKYQIEWALSEYFGELKGKKFILNKMAAEQIEIINNLSDTAKILLSAVSGAVIQHLIDNNCQIENIFEDGYFIVKNXLIH
Ga0187902_109145233	3300018430	Goat Feces	MAQIIEIIVENKNYQIEWALSEHFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKNXSI
Ga0187902_115043022	3300018430	Goat Feces	MLQIIEINIENKKYQIEWALSEYFGELKGKKFMLNEMAADQIEIINNLSYTAKILLSAVAGAAIQHLIDNNCEINNIFEKGYFIVKNXFIN
Ga0187907_101078393	3300018475	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKN
Ga0187907_102353922	3300018475	Goat Feces	MSQVIEIIADNNKYQIEWALSEHFEELKGNKYMLNEVAADQIELIDNLSITAKILLSAVAGAAIQHLIDNNCPIEKIFNDGYFIIKN
Ga0187907_102561713	3300018475	Goat Feces	MSQIIEIIVEKKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNFKIENIFEDGYFIVKNXLIN
Ga0187907_109317961	3300018475	Goat Feces	MSQVIDINLENNKYQIEWAISEHFDELKGKEYKLNQMAADQIETINNLSTTAKLLLSAVAGAVIQYLIDNNCPVDILFTKGYFIVK
Ga0187909_103626972	3300018493	Goat Feces	MSQIIEMMVGNKNYQIEWALSEHFGELKGKKFMLNKMAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIIKN
Ga0187911_100909296	3300018494	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIIKN
Ga0187911_100992531	3300018494	Goat Feces	VVQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIGKINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKK
Ga0187911_102105003	3300018494	Goat Feces	MLQIIEINIENKKYQIEWALSEYFGELKGKKFMLNEMAADQIEIINNLSYTAKILLSAVAGAAIQHLIDNNCEINNIFEKGYFIVKNXFINYSLLI
Ga0187911_105972613	3300018494	Goat Feces	MQIIDIVVDNKNYQIEWALSEYFDELKGMKFMLNEVAADQIIKIDNLSEVAKILLSAVAGAVIQYLIDNNCPIDSIFNNGYFIVRK
Ga0187911_111219731	3300018494	Goat Feces	MSQIIEMMVGNKNYQIEWALSEHFGELKGKKFMLNKMAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNCQLDNIFENGYFIIKN
Ga0187911_113856912	3300018494	Goat Feces	MSQIIEIVVEKKKYQIEWALSEYFGELKGKKFILNKMAAEQIEIINNLSDTAKILLSAVSGAVIQHLIDNNCQIENIFEDGYFIVKNXLIN
Ga0187911_117233982	3300018494	Goat Feces	IVIYKGFDKMSQVIEIIADNNKYQIEWALSEHFEELKGNKYMLNEVAADQIELIDNLSITAKILLSAVAGAAIQHLIDNNCPIEKIFNDGYFIIKN
Ga0187908_101510021	3300018495	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQI
Ga0187908_112577322	3300018495	Goat Feces	YKGFDKMSQVIEIIADNNKYQIEWALSEHFEELKGNKYMLNEVAADQIELIDNLSITAKILLSAVAGAAIQHLIDNNCPIEKIFNDGYFIIKN
Ga0187908_114453402	3300018495	Goat Feces	MSQVIDINLENNKYQIEWAISEHFDELKGKEFKLNQMAADQIETISDLSIAAKILLSAIAGAVIQYLIDNNCLVDKIFNYGYFIIK
Ga0187910_101161362	3300018878	Goat Feces	VVQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIGKINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKKXFINYNVILNKFTFNGII
Ga0187910_101556965	3300018878	Goat Feces	MQIIDIVVDNKNYQIEWALSEYFDELKGMKFMLNEVAADQIIKIDNLSEVAKILLSAVAGAVIQYLIDNNCPIDSIFNNG
Ga0187910_102942211	3300018878	Goat Feces	MSQIIEMMVGNKNYQIEWALSEHFGELKGKKFMLNKMAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNFQIDNIFENGYFIIKN
Ga0187910_112716212	3300018878	Goat Feces	MSQIIEIHVENNKYQIEWAISEHFDELKGKEFKLNQMAADQIETISDLSIAAKILLSAIAGAVIQCLIDNNCLVDKIFNYGYFIIK
Ga0187910_116911833	3300018878	Goat Feces	MSQIIEIIVENKNYQIEWALSEHFEELKGKKFMLNKMAANQIVMIHNLSETAKILLSAVAGAVIQHLIDNNCQLDNIFENGYFIIKN
Ga0187910_119290802	3300018878	Goat Feces	MSQIIEIVVEKKKYQIEWALSEYFGELKGKKFILNKMAAEQIELINNLSDTAKILLSAVSGAVIQHLIDNNCQIENIFE
Ga0187895_100002711	3300019373	Goat Feces	MSQIIEIIVDNKKYQIEWALSEHFDELKGKKFMLNKLAADQIVMMNNLSDIGKILLSAVAGAAIQHLIDNNCQIKSIFENGYLSIKDXVIYHYRK
Ga0223824_100049789	3300021254	Cattle And Sheep Rumen	MLQVIEIYVDNKKDQIEWNLSEHFDELKGKKYMLNEMAADQIVMMKDISETAKILLSAVAGAVIQHLLDNKFEVNSIFEAGYFIIK
Ga0223824_110385801	3300021254	Cattle And Sheep Rumen	MRFRKKEIIMQIIEINVSNKIYKIEWALSEYFDELKGLKFKLNEVAADQIAKINNLSEIAKILLSAVAGAVIQHLLDNNCNIEDIFNNGYFIVKK
Ga0223824_111570982	3300021254	Cattle And Sheep Rumen	AIEISVDDDKYQIEWALSEHFDELKGKKYMLNKVAADQIVMINDLSEIAKILLSAVAGAAIQHLIDNNCSIDSIINKGYLIIK
Ga0223825_1009009313	3300021255	Cattle And Sheep Rumen	MQAIEIIVDDDKYQIEWALSEHFDELKGKKYMLNKVAADQIVMINDLSEIAKILLSAVAGAAIQHLIDNNCSIDSIINKGYLIIK
Ga0223826_100031016	3300021256	Cattle And Sheep Rumen	MSQIIEINVDNKKYQIEWALSEYFDELKGKKFMLNKVAADQIAVIDNLSETAKILLSAVAGAVIQHLIDNNCRVDSIFENGYFIINE
Ga0223845_100073328	3300021387	Cattle And Sheep Rumen	MQAIEIIVDDNKYQIEWALSEHFDELKGKKYMLNKVAADQIVMINDLSEIAKILLSAVAGAAIQHLIDNNCSIDSIINKGYLIIK
Ga0223845_104749723	3300021387	Cattle And Sheep Rumen	MSQIIEIIVENKKYQIEWALSEYFGELKGKKFMLNEVAADQIVMIKDLSETAKILLSAVAGAVIQYLIDNNCQINSIFENGYFIIKNN
Ga0223845_117247045	3300021387	Cattle And Sheep Rumen	MSQIIEIIVENRKYQIEWALSEYFGELKGKKFMLNEVAADQIVTINNISETAKILLSAVAGAVIQHLIDNKCQINSIFENGYFIIK
Ga0224415_100031943	3300021399	Cattle And Sheep Rumen	MQVIEIIVENKNYQIEWALSEHFDELRGMKFMLNNVAADQIVKIGNLSETAKILLSAVAGAVIQHLIDNNCPIDSIFENGYFIIKK
Ga0224415_100438962	3300021399	Cattle And Sheep Rumen	MSQIIEIIVENKKYQIEWALSEYFGELKGKKFMLNKMAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCHINSIFENGYFIIKNN
Ga0224415_101152092	3300021399	Cattle And Sheep Rumen	MSQIIEINVENKEYQIEWALSEYFDELKGMKFMLNSVAADQIVMINNLSETAKILLSAVAGAVIQYLIDNNCPIDSIFESGYFIIQK
Ga0224415_103702652	3300021399	Cattle And Sheep Rumen	MSQIIEINVENQEYQIEWALSEYFDELKGMKFMLNSVAADQIVMINNLSETAKILLSAVAGAVIQYLIDNNCPIDSIFESGYFIIRK
Ga0224415_107015201	3300021399	Cattle And Sheep Rumen	MVQIIEIIVENRKYQIEWALSEHFDELKGMKFMLNEVAADQIVMINNLSEIAKILLSAVAGAVIQHLIDNNCQIESIFENGYFIIKK
Ga0224422_101908226	3300021400	Cattle And Sheep Rumen	MVQIIEIIVENKKYQIEWALSEHFDELKGMKFMLNEVAADQIVMINNLSEIAKILLSAVAGAAIQHLIDNNCPIDSIFENGYFIIKK
Ga0224422_105594161	3300021400	Cattle And Sheep Rumen	MVQIIEIIVDNKNYQIEWALSEHFNELKGKKFMLNEVAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCDIDSIFENGYFIIKNDL
Ga0224422_108749612	3300021400	Cattle And Sheep Rumen	MQIIEIIVENKKYQIEWALSEHFDELRGMKFMLNNVAADQIVKIDNLSETAKLLLSAVAGAVIQYLIDNECLIDSIFENGYFIIKK
Ga0224422_1180136810	3300021400	Cattle And Sheep Rumen	MLQVIEIIVDDKKYQIEWNISEHFGELKGRKFMLNEMAADRLVKIKDLSETAKILLSAVAGAAIQYLIDIKINIDSIFENGYFIVK
Ga0224422_123199081	3300021400	Cattle And Sheep Rumen	MVQIIEIIVDNNKYQIEWALSEYFGELKGMKFMLNKMAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCKIESIFENGYFIIK
Ga0224422_127866214	3300021400	Cattle And Sheep Rumen	MSQIIEINVDNKIYKIEWALSEYFDELKGMKFMLNKVAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCGIDSIFNNGYFIILE
Ga0224482_1000190837	3300021426	Cattle And Sheep Rumen	MSQIIEINVDNKIYKIEWALSEYFDELKGMKFMLNKVAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNCRLDSIFENGYFIINE
Ga0224482_102838213	3300021426	Cattle And Sheep Rumen	VQIIEIIVDNNKYQIEWALSEHFSELKGMKFMLNKMAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCKVDSIFENGYFIIK
Ga0224423_100210725	3300021431	Cattle And Sheep Rumen	MSQIIEIIVENKKYQIEWALSEHFYELKGMKFMLNKMAADQIVMISNLSETAKILLSAVAGAVIQHLIDNNCQIDSIFENGYFFIKNDLKS
Ga0216346_101303044	3300022589	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKN
Ga0216342_109602722	3300022660	Goat Feces	MSQIIEIVVEKKKYQIEWALSEYFGELKGKKFILNKMAAEQIEIINNLSDTAKILLSAVSGAVIQHLIDNNCQIENIFEDGYFIVKN
Ga0216339_101062441	3300022661	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIV
Ga0216339_104657492	3300022661	Goat Feces	MSQIIEIIVEKKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNFKIENIFEDGYFIVKN
Ga0216341_106239522	3300022753	Goat Feces	MSQIIEIIVEKKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNFKIENIFEDGYFIV
Ga0257090_101250324	3300024268	Goat Feces	MAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSETAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIIKN
Ga0257090_103647176	3300024268	Goat Feces	NKNYQIEWALSEYFGELKGKKFMINKMAADQIEMINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKKXFINYNVILNKFTFNGII
Ga0257090_104057861	3300024268	Goat Feces	MVQIIEIIVGNKNYQIEWVLSEYFGELKGNKFMLNEMAADQIEMINNLSETAKILLSAVAGAVIQHLIDNNCQIDSIFENGYFIVKK
Ga0257090_109703712	3300024268	Goat Feces	MSQIIEIHVENNKYQIEWAISEHFDELKGKEFKLNQMAADQIETISDLSIAAKILLSAIAGAVIQYLIDNNCLVDKIFNYGYFIIK
Ga0257090_113728161	3300024268	Goat Feces	WALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNFKIENIFEDGYFIVKNXLIN
Ga0257076_104771863	3300024269	Goat Feces	MLQIIEINVENKKYQIEWALSEYFGELKGKKFMLNEMAADQIEIINNLSYTAKILLSAVAGAAIQHLIDNNCEINNIFEKGYFIVKNXFINYSLLI
Ga0257077_103256633	3300024272	Goat Feces	MLQIIEINKENKKYQIEWALSEYFGELKGKKFMLNEMAADQIEIINNLSYTAKILLSAVAGAVIQHLIDNNCEINNIFEKGYFIVKNXFINYSLLI
Ga0257089_102812881	3300024303	Goat Feces	KEISMAQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKN
Ga0257089_103562833	3300024303	Goat Feces	MSQIIEIIVENKNYQIEWALSEYFGELKGKKFMLNKMAAEQIEMINNLSDTAKILLSAVAGAVIQHLIDNNFKIENIFEDGYFIVKNXLIN
Ga0209467_100372414	3300027719	Freshwater	MTQIIEIIVGDKDYQIKWALSEHFGELKGKKFMLNKMAAEQIVMINNLSDTAKILLSAVAGAVIQYLIDNNCQTDNIFESGYFIIKNXFINKSQFIILIAIT
Ga0302102_101263363	3300028242	Goat Feces	QIEWALSEYFGELKGKKFMLNKMAAEQIEMINSLSDTAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIVKN
Ga0302102_103286951	3300028242	Goat Feces	QIEWALSEYFGELKGKKFMLNKMAADQIVMIDNLSETAKILLSAVAGAVIQHLIDNNCQIDNIFENGYFIIKN
Ga0247611_100046856	3300028591	Rumen	MSQIIEINVENKKYQIEWALSEYFDELKGMKFMLNSVAADQIIMINNLSETAKILLSAVAGAVIQYLIDNNCPIDSIFESGYFIIQK
Ga0247611_100295772	3300028591	Rumen	MLQVIEINVDNKEYKIEWALSEFFGELKGKKFMLNCVAAEQIVRIDDLSETAKILLSAVAGAVIQFLMDNNCSIDSIFGNGYFIVK
Ga0247611_117558432	3300028591	Rumen	MSQIIEIMVDNKEYQIEWTLSEHFDELKGMKFMLNEMAADQIVMINNISETAKILLSAVAGAAIQHLLDNNCHVNSIFENGY
Ga0247608_100032709	3300028805	Rumen	MQIIEINVDNKEYQIKWALSEFFGELKGMKFNLNEVAADQIVKLTNLSETAKILLSAVAGAVIQYLMDNNCPIDSIFNNGYFIVK
Ga0247608_100034604	3300028805	Rumen	VSIGTVPFDIESKKGECMVQIIEIIVDNNKYQIEWALSEYFGELKGMKFMLSKMAADQIVMINNLSETAKILLSAVAGAVIQHLIDNNCNIESIFENGYFIIK
Ga0247610_112290632	3300028833	Rumen	MSQIIEITVDQKQFQIEWAISEHFDELRGKKFMINEMAADQIVNINNISETAKILLSAVAGAVIQYLMDNNVSLDSIFGNGFFIVK
Ga0256407_100123727	3300028886	Rumen	MSQIIEIIVENKKYQIEWALSEYFGELKGKKFMLNEVVADQIVMINNISETAKILLSAIAGAVIQHLIDNNCQIKNIFENGYFIIKKXFIVKLQ
Ga0265300_108935592	3300028914	Rumen	MQIIEIIVDNKKYQIEWALSEHFGELKGKKFMLNQVAADQIVMINNLSETAKILLSAVAGAVIQYLIDSNCQINSIFENGYFIIK
Ga0307249_100131538	3300029305	Goat Feces	MLQIIEINIENKKYQIEWALSEYFGELKGKKFMLNEMAADQIEIINNLSYTAKILLSAVAGAAIQHLIDNNCEINNIFEKGYFIVKN
Ga0307249_104279063	3300029305	Goat Feces	MLQIIEINVENKNYQIEWALSEYFGELKGKKFMINKMAADQIEMINNLSDTAKILLSAVAGAVIQHLIDNNCQINNIFEKGYFIVKN
Ga0307249_104317541	3300029305	Goat Feces	MAQIIEIIVDNKNYQIEWALSEYFGELKGKKFMLNEMAAEQIETINVLSNTAKILLSAVAGAVIQHLIDNNCNIANIFENGYFIIKN
Ga0307249_111941593	3300029305	Goat Feces	MSQIIEIIVENKNYQIEWALSEHFEELKGKKFMLNKMAANQIVMIHNLSETAKILLSAVAGAVIQHLIDNNCQLDNIFENGYFIIKNXSINKLQFTKESKXN
Ga0061013_124987732	3300030772	Fungi-Associated Bovine Rumen	MSQIIEIIIENKKYQIEWALSEHFGELIGKKFMLNKMAADQIVMINNISETAKILLSAVAGAVIQHLIDNNCQINSIFENGYFIIKNGL
Ga0061018_141697802	3300031085	Fungi-Associated Bovine Rumen	MKRMENGMSQIIEIIIENKKYQIEWALSEHFGELIGKKFMLNKMAADQIVMINNISETAKILLSAVAGAVIQHLIDNNCQINSIFENGYFIIKNGL
Ga0318466_110591641	3300031555	Goat Feces	MAQIIEIIVDNKNYQIEWALSEYFGELKGKKFMLNKMAAEQIETINVLSNTAKILLSAVAGAVIQHLIDNNCNIANIFENGYFIIKN
Ga0318466_119509913	3300031555	Goat Feces	SQIIEIIVENKNYQIEWALSEHFEELKGKKFMLNKMAANQIVMIHNLSETAKILLSAVAGAVIQHLIDNNCQLDNIFENGYFIIKNXSINKLQFTKESKXN
Ga0310694_101940542	3300031992	Rumen	MSQKVEITVDEKQFQIEWAISEHFDELRGKKFMINEMAADQIVNINNMSETAKILLSAVAGAVIQYLMDNNVSLDSIFGNGFFIVK
Ga0310696_102298243	3300031993	Rumen	MQIIEIKVNDKDYKIEWALSEYFDELKGMKFNLNEVEAYQIVKIDNLSETAKILLSAVAGAVIQHLIDENLPIDSIFNNGYFIVKK
Ga0310691_103547012	3300031994	Rumen	MSQKVEITVDEKQFQIEWAISEHFDELRGNKFMINEMAADQIVNINNMSETAKILLSAVAGAVIQYLMDNNVSLDSIFGNGFFIVK
Ga0310786_106694302	3300031998	Rumen	MSQIIEIIVENKKYQIEWALSEYFDELKGMKFMLNKMAADQIVMINNLSETAKILLSAVAGAVIQNLIDNNYQIDSIFENGYFIIKK
Ga0310786_110848942	3300031998	Rumen	MQIIEINVDNKEYQIEWALSEYFGELKGMKFNLNEVAADQIVKLTNLSDVAKILLSAVAGAVIQYLMDNNCPIDSIFNNGYLIVK
Ga0310695_107551682	3300032007	Rumen	MQIIEIIVDDKTYQIEWALSEHFDELKGMKFMLNEVAADQIIKINNLSEIAKILLSAVAGAVIQHLIDINCPIDSIFNNGYFIVKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082888

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences