Metagenome / Metatranscriptome Family F082934

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	59 residues
Representative Sequence	GFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.77 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.814 % of family members)
Environment Ontology (ENVO)	Unclassified (43.363 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.752 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.95% β-sheet: 0.00% Coil/Unstructured: 21.05%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF07690	MFS_1	24.78
PF10812	DUF2561	0.88
PF00083	Sugar_tr	0.88
PF03706	LPG_synthase_TM	0.88
PF16350	FAO_M	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.53 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.53 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.52 %
Unclassified	root	N/A	10.62 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.73 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	57.52 %
Unclassified	root	N/A	10.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	57.52 %
Unclassified	root	N/A	10.62 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	57.52 %
Unclassified	root	N/A	10.62 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	57.52 %
Unclassified	root	N/A	10.62 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	57.52 %
Unclassified	root	N/A	10.62 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0964384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1251	Open in IMG/M
3300000956\|JGI10216J12902_102760778	Not Available	1647	Open in IMG/M
3300002077\|JGI24744J21845_10081864	Not Available	590	Open in IMG/M
3300004114\|Ga0062593_102168576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005093\|Ga0062594_100691396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	918	Open in IMG/M
3300005329\|Ga0070683_100496638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1166	Open in IMG/M
3300005329\|Ga0070683_102130342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300005330\|Ga0070690_100625679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300005330\|Ga0070690_101624795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005333\|Ga0070677_10353687	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005334\|Ga0068869_100090953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2295	Open in IMG/M
3300005337\|Ga0070682_101690395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300005338\|Ga0068868_100857371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300005344\|Ga0070661_100848734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300005345\|Ga0070692_11124569	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005347\|Ga0070668_100581699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300005353\|Ga0070669_101916163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005354\|Ga0070675_100987881	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005355\|Ga0070671_100940770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300005356\|Ga0070674_100066477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2533	Open in IMG/M
3300005406\|Ga0070703_10127631	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005438\|Ga0070701_10120474	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005445\|Ga0070708_101448401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300005535\|Ga0070684_101135542	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005539\|Ga0068853_100232879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300005543\|Ga0070672_100069068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2804	Open in IMG/M
3300005547\|Ga0070693_101063947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005548\|Ga0070665_100677215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300005577\|Ga0068857_100254400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1611	Open in IMG/M
3300005616\|Ga0068852_100878527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	913	Open in IMG/M
3300005844\|Ga0068862_100939532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300006178\|Ga0075367_10210744	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300006574\|Ga0074056_10959592	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300006575\|Ga0074053_11552185	Not Available	555	Open in IMG/M
3300006852\|Ga0075433_11805077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300006854\|Ga0075425_102740950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300009094\|Ga0111539_12407909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300009098\|Ga0105245_13176014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300009176\|Ga0105242_11078551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	816	Open in IMG/M
3300010373\|Ga0134128_11369352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300010400\|Ga0134122_11605468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300010403\|Ga0134123_12960413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300012892\|Ga0157294_10111016	Not Available	717	Open in IMG/M
3300012893\|Ga0157284_10020323	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300012896\|Ga0157303_10158412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012897\|Ga0157285_10000364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6387	Open in IMG/M
3300012897\|Ga0157285_10326248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300012901\|Ga0157288_10051440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300012901\|Ga0157288_10434412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300012905\|Ga0157296_10164621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300012906\|Ga0157295_10140061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300012913\|Ga0157298_10062594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300012913\|Ga0157298_10365338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300012961\|Ga0164302_11696184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300012987\|Ga0164307_10730631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300013307\|Ga0157372_13353710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300014268\|Ga0075309_1112693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300014745\|Ga0157377_10123231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1574	Open in IMG/M
3300014968\|Ga0157379_11296318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300014969\|Ga0157376_10110143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2422	Open in IMG/M
3300015372\|Ga0132256_102580715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300017792\|Ga0163161_10698304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300018476\|Ga0190274_11265091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300018476\|Ga0190274_12671556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300019361\|Ga0173482_10462511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300019362\|Ga0173479_10413486	Not Available	655	Open in IMG/M
3300022883\|Ga0247786_1013201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1530	Open in IMG/M
3300022898\|Ga0247745_1006820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300022906\|Ga0247766_1097663	Not Available	757	Open in IMG/M
3300023072\|Ga0247799_1054133	Not Available	671	Open in IMG/M
3300023263\|Ga0247800_1114188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300024055\|Ga0247794_10018801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1696	Open in IMG/M
3300025899\|Ga0207642_10163848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300025899\|Ga0207642_10306633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300025907\|Ga0207645_10276676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300025907\|Ga0207645_10456243	Not Available	863	Open in IMG/M
3300025920\|Ga0207649_10526177	Not Available	902	Open in IMG/M
3300025921\|Ga0207652_10536618	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300025931\|Ga0207644_11526827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300025932\|Ga0207690_10780695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300025934\|Ga0207686_10660218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300025935\|Ga0207709_10078279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2122	Open in IMG/M
3300025937\|Ga0207669_10779805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300025944\|Ga0207661_10493921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1118	Open in IMG/M
3300025945\|Ga0207679_10356627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1276	Open in IMG/M
3300025949\|Ga0207667_10218366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1953	Open in IMG/M
3300025949\|Ga0207667_11398571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300025961\|Ga0207712_10873219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300026067\|Ga0207678_11156317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300026088\|Ga0207641_10911159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300026095\|Ga0207676_11289604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300026095\|Ga0207676_11321567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300026118\|Ga0207675_100192124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1958	Open in IMG/M
3300026121\|Ga0207683_10726159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300028589\|Ga0247818_10213549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1269	Open in IMG/M
3300028592\|Ga0247822_11713995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300028597\|Ga0247820_10626010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300028809\|Ga0247824_10627279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300030336\|Ga0247826_10615871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300030336\|Ga0247826_11075871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300030336\|Ga0247826_11353589	Not Available	574	Open in IMG/M
3300031716\|Ga0310813_10265411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1435	Open in IMG/M
3300031716\|Ga0310813_10955016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300031854\|Ga0310904_10499779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300031858\|Ga0310892_10497056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300031913\|Ga0310891_10279099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031943\|Ga0310885_10900772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300032012\|Ga0310902_10059595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300032013\|Ga0310906_10673750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300032075\|Ga0310890_11294705	Not Available	596	Open in IMG/M
3300032122\|Ga0310895_10204146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300032179\|Ga0310889_10218022	Not Available	890	Open in IMG/M
3300033550\|Ga0247829_11357031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.52%
Host-Associated	Host-Associated	42.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.52%
Plants	Host-Associated → Plants	42.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.04%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.16%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	15.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	15.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09643843	2228664021	Soil	IGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA
JGI10216J12902_1027607783	3300000956	Soil	AYMGAFGSAPAIGFALAPLIGFQVRNVYGDDATWTLFALLGVVAAVLGGLALTAVRPRRDSSAVLES*
JGI24744J21845_100818641	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	ALAPMIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA*
Ga0062593_1021685761	3300004114	Soil	LQMRNSFGDEATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA*
Ga0062594_1006913963	3300005093	Soil	LIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0070683_1004966383	3300005329	Corn Rhizosphere	PLIGLQMRNSFGDEATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA*
Ga0070683_1021303421	3300005329	Corn Rhizosphere	NSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKTRGERSAVLEA*
Ga0070690_1006256792	3300005330	Switchgrass Rhizosphere	PADIRGAYMGAFGSAPAIGFALAPMIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA*
Ga0070690_1016247952	3300005330	Switchgrass Rhizosphere	PAIGFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0070677_103536871	3300005333	Miscanthus Rhizosphere	GDEATWAMFAVIGVVAAAFGGLALAGFDQKARRERSAVLEA*
Ga0068869_1000909533	3300005334	Miscanthus Rhizosphere	AFGSAPAIGFALAPLIGFQVRNIYGDDATWTMFAFLGVVAAMLGGLALVGVRRRVGRESSAVLKT*
Ga0070682_1016903952	3300005337	Corn Rhizosphere	DEATWAMFAVIGVVAAAFGGLALAGFDRKTRGERSAVLEA*
Ga0068868_1008573711	3300005338	Miscanthus Rhizosphere	GAYMGAFGSAPAIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRIDDDRSAVLET*
Ga0070661_1008487341	3300005344	Corn Rhizosphere	GDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA*
Ga0070692_111245692	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRLDDDRSAVLET*
Ga0070668_1005816991	3300005347	Switchgrass Rhizosphere	APLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA*
Ga0070669_1019161631	3300005353	Switchgrass Rhizosphere	APADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA*
Ga0070675_1009878812	3300005354	Miscanthus Rhizosphere	MGAFGSAPAIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRIDDDRSAVLET*
Ga0070671_1009407701	3300005355	Switchgrass Rhizosphere	MIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARRERSAVLEA*
Ga0070674_1000664771	3300005356	Miscanthus Rhizosphere	DIRGAYMGAFGSAPAIGFALAPLIGLQVRNSFGDEATWAMFAGIGVVAAVLGGLALVGLDRRAQGGRSAVLEA*
Ga0070703_101276311	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	YMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0070701_101204743	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	SAPAIGFALAPMIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA*
Ga0070708_1014484011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	APLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0070684_1011355421	3300005535	Corn Rhizosphere	FGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA*
Ga0068853_1002328791	3300005539	Corn Rhizosphere	PADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA*
Ga0070672_1000690681	3300005543	Miscanthus Rhizosphere	YLPRRGAFALIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0070693_1010639471	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	SQAVVAELAPADIRGAYMGAFGSAPAIGFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALASLDRRAGPEPSAVLEA*
Ga0070665_1006772151	3300005548	Switchgrass Rhizosphere	GFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0068857_1002544001	3300005577	Corn Rhizosphere	APLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0068852_1008785271	3300005616	Corn Rhizosphere	AWLVAYRYLPRRGAFALIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0068862_1009395323	3300005844	Switchgrass Rhizosphere	AVVAELAPADIRGAYMGAFGSAPAIGFAIAPLIGLQARNSFGDETTWAQFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0075367_102107441	3300006178	Populus Endosphere	AIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRIDDDRSAVLET*
Ga0074056_109595922	3300006574	Soil	SAPAIGFALAPLIGLQMRNSVGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0074053_115521852	3300006575	Soil	MGAFGSAPAIGFAIAPLIDLQARNSFGDETTWALFAVTGVVAAMPGGPALAGLDGRAGPEPSAVLEA*
Ga0075433_118050771	3300006852	Populus Rhizosphere	GDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA*
Ga0075425_1027409501	3300006854	Populus Rhizosphere	PAIGFALAPLIGLQMRNSFGDDATWTLFALLGVVAACLGGLALVGVRRRVGGEPSTVLKT
Ga0111539_124079092	3300009094	Populus Rhizosphere	YMGAFGSAPAIGFALAPLIGLQVRNSFGDEATWAMFAGIGVVAAVLGGLALVGLDRRAQGGRSAVLEA*
Ga0105245_131760142	3300009098	Miscanthus Rhizosphere	ATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLEA*
Ga0105242_110785511	3300009176	Miscanthus Rhizosphere	DIRGAYMGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAGIGVVAAVLGGLALVGLDRRAQGGRSAVLEA*
Ga0134128_113693523	3300010373	Terrestrial Soil	FAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0134122_116054681	3300010400	Terrestrial Soil	TWAMFAVIGVVAAVLGGLALAGLDRRARRGSSAVLEA*
Ga0134123_129604132	3300010403	Terrestrial Soil	ATWAMFAVIGVVAAAFGGLALAGFDRKARGERAAVREA*
Ga0157294_101110161	3300012892	Soil	APAIGFALAPMIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA*
Ga0157284_100203231	3300012893	Soil	IGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA*
Ga0157303_101584122	3300012896	Soil	IGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARRERSAVLEA*
Ga0157285_100003647	3300012897	Soil	QMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGSSAVLEA*
Ga0157285_103262481	3300012897	Soil	SAPAIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRIDDDRSAVLET*
Ga0157288_100514401	3300012901	Soil	GAYMGAFGSAPAIGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA*
Ga0157288_104344121	3300012901	Soil	AIGFAIAPLIGLQMRNSVGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0157296_101646211	3300012905	Soil	TWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA*
Ga0157295_101400612	3300012906	Soil	AIGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGSSAVLEA*
Ga0157298_100625943	3300012913	Soil	GLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGSSAVLEA*
Ga0157298_103653382	3300012913	Soil	QMRNSFGDEATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA*
Ga0164302_116961841	3300012961	Soil	DETTWALFAVIGVVAAMLGGLALVGLDRRAGPEPSAVLEA*
Ga0164307_107306313	3300012987	Soil	RNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA*
Ga0157372_133537101	3300013307	Corn Rhizosphere	LRGAYMGAFGSAPAIGFALAPLIGLQMRNSFGDDATWTLFALLGVVAACLGGLALVGVRRRVGGEPSAVLKT*
Ga0075309_11126931	3300014268	Natural And Restored Wetlands	APAIGFALAPLIGLQMRNSFGDEATWAMFAGIGVLAAVLGGLALVGLDRRSGRGTSAVLEA*
Ga0157377_101232311	3300014745	Miscanthus Rhizosphere	LAPADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA*
Ga0157379_112963182	3300014968	Switchgrass Rhizosphere	GAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA*
Ga0157376_101101431	3300014969	Miscanthus Rhizosphere	MIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA*
Ga0132256_1025807151	3300015372	Arabidopsis Rhizosphere	APLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKTRGERSAVLEA*
Ga0163161_106983043	3300017792	Switchgrass Rhizosphere	GFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0190274_112650911	3300018476	Soil	SAPAIGFALAPLIGLQMRNSFGDEATWALFAGIGVVAAVLGGLALVGLDRRAQGGRSAVLET
Ga0190274_126715561	3300018476	Soil	GAYMGAFGSAPAIGFALSPLIGLQVRNSFGDDATWLMFAALGVVAAVLGGLALAGVGRRLRRDRSAVLEA
Ga0173482_104625112	3300019361	Soil	IGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKTRAERSAVLGA
Ga0173479_104134861	3300019362	Soil	AELAPPDIRGAYMGAFGSAPAIGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA
Ga0247786_10132011	3300022883	Soil	IAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA
Ga0247745_10068201	3300022898	Soil	MGAFGSAPAIGFAIAPLIGLQMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA
Ga0247766_10976633	3300022906	Plant Litter	DEATWAMFAAIGVVAAAFGGLALAGLDRTARRERSAVLEA
Ga0247799_10541332	3300023072	Soil	ALAPMIGLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA
Ga0247800_11141882	3300023263	Soil	AMFAVIGVVAAVLGGLALAGLDRRARRGSSAVLEA
Ga0247794_100188011	3300024055	Soil	MRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA
Ga0207642_101638483	3300025899	Miscanthus Rhizosphere	LAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0207642_103066331	3300025899	Miscanthus Rhizosphere	FALAPLIGLQVRNSFGDEATWAMFAVIGVIAAVLGGLALLGLDRRAGGSRSAVLEA
Ga0207645_102766761	3300025907	Miscanthus Rhizosphere	FGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA
Ga0207645_104562431	3300025907	Miscanthus Rhizosphere	RNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA
Ga0207649_105261773	3300025920	Corn Rhizosphere	GLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARREGSAVLEA
Ga0207652_105366183	3300025921	Corn Rhizosphere	PADIRGAYMGAFGSAPAIGFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0207644_115268271	3300025931	Switchgrass Rhizosphere	AIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA
Ga0207690_107806951	3300025932	Corn Rhizosphere	WALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0207686_106602181	3300025934	Miscanthus Rhizosphere	DIRGAYMGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAGIGVVAAVLGGLALVGLDRRAQGGRSAVLEA
Ga0207709_100782794	3300025935	Miscanthus Rhizosphere	CRHKNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0207669_107798052	3300025937	Miscanthus Rhizosphere	SQAVVAELAPADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA
Ga0207661_104939211	3300025944	Corn Rhizosphere	DEAMWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0207679_103566271	3300025945	Corn Rhizosphere	YMGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVIAAVFGGLALAGLDRTARRERSAVLGA
Ga0207667_102183663	3300025949	Corn Rhizosphere	GLQMRNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARRERSAVLEA
Ga0207667_113985711	3300025949	Corn Rhizosphere	GSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA
Ga0207712_108732192	3300025961	Switchgrass Rhizosphere	AVVAELAPADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKARGERSAVLEA
Ga0207678_111563172	3300026067	Corn Rhizosphere	APAIGFALAPLIGFQVRNIYGDDATWTMFAFLGVVAAMLGGLALVGVRRRVGRESSAVLK
Ga0207641_109111593	3300026088	Switchgrass Rhizosphere	SQAVVAELAPADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0207676_112896042	3300026095	Switchgrass Rhizosphere	PAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0207676_113215671	3300026095	Switchgrass Rhizosphere	AFGSAPAIGFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0207675_1001921241	3300026118	Switchgrass Rhizosphere	RNSFGDEATWAMFAAIGVVAAAFGGLALAGLDRTARRERSAVLEA
Ga0207683_107261591	3300026121	Miscanthus Rhizosphere	ALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0247818_102135493	3300028589	Soil	VRFFHGDEATWAMVAGIGVVAHGGLALVRLDRQARGGRSAVLET
Ga0247822_117139951	3300028592	Soil	SAPAIGFAIAPLIGLQARNSFGDETTWALFAVIGVVAAMLGGLALVGLDRRAGPEPSAVLEA
Ga0247820_106260101	3300028597	Soil	AYMGAFGSAPAIGFALAPLIGLQMRNSFGDDATWTLFALLGVVAACLGGLALVGVRRRVGGEPSAVLKT
Ga0247824_106272791	3300028809	Soil	FGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA
Ga0247826_106158711	3300030336	Soil	IGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0247826_110758712	3300030336	Soil	GAFGSAPAIGFALSPLIGLQVRNSFGDDATWLMYAALGVVAAVLGGLALAAVGRRLRRDPSAVLEA
Ga0247826_113535891	3300030336	Soil	RRGAYMGAFGSAPAIGFALSPLIGLQVRNSFGDDATWLMYAVLGVVAAVLGGLALAGVGRRLRRDRSAVLET
Ga0310813_102654112	3300031716	Soil	MGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRKTRAERSAVLGA
Ga0310813_109550161	3300031716	Soil	QMRNSFGDEATWAMFAVIGVVAAVLGGLALAGLDRRARRGTSAVLEA
Ga0310904_104997793	3300031854	Soil	LQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0310892_104970561	3300031858	Soil	GAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA
Ga0310891_102790991	3300031913	Soil	AFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0310885_109007722	3300031943	Soil	ELAPADIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0310902_100595951	3300032012	Soil	LAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDPKARREPSAVLEA
Ga0310906_106737503	3300032013	Soil	ETTWALFAVIGVVAAMLGGLALAGLDRRAGPEPSAVLEA
Ga0310890_112947052	3300032075	Soil	YMGAFGSAPAIGFALAPLIGFQVRNSFGDDATWTLFAALGVVAAALGGLALVGVRRRIDDDRSAVLET
Ga0310895_102041463	3300032122	Soil	DIRGAYMGAFGSAPAIGFALAPLIGLQMRNSFGDEATWAMFAVIGVVAAAFGGLALAGFDRNARGERSAVLEA
Ga0310889_102180223	3300032179	Soil	LAPSDIRGAYMGAFGSAPAIGFALAPLIGLQMRNSLGDEATWAMFAVIGVVAAAFGGLALAGFDRKERGERSAVLEA
Ga0247829_113570311	3300033550	Soil	GAFGSAPAIGFALAPLIGLQVRNSFGDEATWAMFAVIGVIAAVLGGLALPGLDRRAGGSRSAVLEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences