Metagenome / Metatranscriptome Family F083054

Basic Information
Family ID	F083054
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	36 residues
Representative Sequence	MLNPLRSEGDAFRLLLYVIAVFGTIIAIILIARAL
Number of Associated Samples	93
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.65 %
% of genes near scaffold ends (potentially truncated)	12.39 %
% of genes from short scaffolds (< 2000 bps)	65.49 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (66.372 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.620 % of family members)
Environment Ontology (ENVO)	Unclassified (27.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.637 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.21% β-sheet: 0.00% Coil/Unstructured: 50.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00127	Copper-bind	46.90
PF00510	COX3	34.51
PF00115	COX1	4.42
PF13302	Acetyltransf_3	1.77
PF00459	Inositol_P	1.77
PF13579	Glyco_trans_4_4	1.77
PF00255	GSHPx	0.88
PF01966	HD	0.88
PF01040	UbiA	0.88
PF12627	PolyA_pol_RNAbd	0.88
PF00534	Glycos_transf_1	0.88
PF00155	Aminotran_1_2	0.88
PF01872	RibD_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	34.51
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.83 %
Unclassified	root	N/A	33.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.83 %
Unclassified	root	N/A	33.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	53.98 %
Unclassified	root	N/A	33.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	48.67 %
Unclassified	root	N/A	33.63 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	17.70 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	5.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	17.70 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.77 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	17.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.77 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.88 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	17.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.77 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.88 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10893379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	564	Open in IMG/M
3300005541\|Ga0070733_10290968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1078	Open in IMG/M
3300005564\|Ga0070664_101268028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	696	Open in IMG/M
3300005602\|Ga0070762_10453898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	834	Open in IMG/M
3300006059\|Ga0075017_100239506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1324	Open in IMG/M
3300006059\|Ga0075017_100714891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	771	Open in IMG/M
3300006638\|Ga0075522_10078045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1837	Open in IMG/M
3300006638\|Ga0075522_10100918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1564	Open in IMG/M
3300006954\|Ga0079219_10550542	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009672\|Ga0116215_1070977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1570	Open in IMG/M
3300009698\|Ga0116216_10292086	Not Available	994	Open in IMG/M
3300009824\|Ga0116219_10191692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1172	Open in IMG/M
3300010042\|Ga0126314_10165126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1549	Open in IMG/M
3300010152\|Ga0126318_10357496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1081	Open in IMG/M
3300010341\|Ga0074045_10189705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1381	Open in IMG/M
3300010379\|Ga0136449_100433188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2316	Open in IMG/M
3300010379\|Ga0136449_103811040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	567	Open in IMG/M
3300010379\|Ga0136449_104363815	Not Available	522	Open in IMG/M
3300012176\|Ga0153952_1132867	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_102080630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300012678\|Ga0136615_10015293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3956	Open in IMG/M
3300012958\|Ga0164299_11479599	Not Available	529	Open in IMG/M
3300014155\|Ga0181524_10037785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3226	Open in IMG/M
3300014155\|Ga0181524_10381238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	620	Open in IMG/M
3300014162\|Ga0181538_10443591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	688	Open in IMG/M
3300014165\|Ga0181523_10324963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	865	Open in IMG/M
3300014199\|Ga0181535_10024067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4745	Open in IMG/M
3300014199\|Ga0181535_10392145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	814	Open in IMG/M
3300014201\|Ga0181537_10960524	Not Available	578	Open in IMG/M
3300014489\|Ga0182018_10528502	Not Available	623	Open in IMG/M
3300014493\|Ga0182016_10154166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1540	Open in IMG/M
3300014493\|Ga0182016_10300247	Not Available	983	Open in IMG/M
3300014501\|Ga0182024_10038084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8000	Open in IMG/M
3300014501\|Ga0182024_10286328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2186	Open in IMG/M
3300014501\|Ga0182024_10556396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1446	Open in IMG/M
3300014501\|Ga0182024_10908454	Not Available	1060	Open in IMG/M
3300014501\|Ga0182024_11512393	Not Available	766	Open in IMG/M
3300014501\|Ga0182024_12952499	Not Available	502	Open in IMG/M
3300014655\|Ga0181516_10669248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	537	Open in IMG/M
3300014838\|Ga0182030_10042987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7455	Open in IMG/M
3300014838\|Ga0182030_11247294	Not Available	631	Open in IMG/M
3300015080\|Ga0167639_1012955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1196	Open in IMG/M
3300015161\|Ga0167623_1039107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1015	Open in IMG/M
3300015199\|Ga0167647_1001141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10194	Open in IMG/M
3300017822\|Ga0187802_10264871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300017938\|Ga0187854_10096424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1391	Open in IMG/M
3300017948\|Ga0187847_10059096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2164	Open in IMG/M
3300018033\|Ga0187867_10536356	Not Available	642	Open in IMG/M
3300018034\|Ga0187863_10248538	Not Available	988	Open in IMG/M
3300018042\|Ga0187871_10204764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1102	Open in IMG/M
3300018043\|Ga0187887_10020460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4280	Open in IMG/M
3300018047\|Ga0187859_10026733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3140	Open in IMG/M
3300018422\|Ga0190265_10314998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1640	Open in IMG/M
3300020581\|Ga0210399_10103239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2334	Open in IMG/M
3300020583\|Ga0210401_10482527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1102	Open in IMG/M
3300021178\|Ga0210408_10005979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	10579	Open in IMG/M
3300021180\|Ga0210396_10000615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	44946	Open in IMG/M
3300021181\|Ga0210388_10404599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1200	Open in IMG/M
3300021403\|Ga0210397_10024720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3717	Open in IMG/M
3300021404\|Ga0210389_10133551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1921	Open in IMG/M
3300021420\|Ga0210394_10789054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	830	Open in IMG/M
3300021433\|Ga0210391_10425167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1043	Open in IMG/M
3300021433\|Ga0210391_10536932	Not Available	918	Open in IMG/M
3300021474\|Ga0210390_11495280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	535	Open in IMG/M
3300025588\|Ga0208586_1101567	Not Available	621	Open in IMG/M
3300025627\|Ga0208220_1069315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300025862\|Ga0209483_1072583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1560	Open in IMG/M
3300026075\|Ga0207708_10454576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1067	Open in IMG/M
3300027867\|Ga0209167_10287183	Not Available	888	Open in IMG/M
3300027889\|Ga0209380_10656770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	604	Open in IMG/M
3300027905\|Ga0209415_10038032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6617	Open in IMG/M
3300027905\|Ga0209415_10098184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3233	Open in IMG/M
3300027905\|Ga0209415_10122960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2731	Open in IMG/M
3300027908\|Ga0209006_10048585	All Organisms → cellular organisms → Bacteria	3817	Open in IMG/M
3300027911\|Ga0209698_10095085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2502	Open in IMG/M
3300027911\|Ga0209698_10615736	Not Available	833	Open in IMG/M
3300028047\|Ga0209526_10407194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	902	Open in IMG/M
3300028562\|Ga0302151_10020507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2453	Open in IMG/M
3300028762\|Ga0302202_10106998	Not Available	1589	Open in IMG/M
3300028800\|Ga0265338_10901833	Not Available	602	Open in IMG/M
3300029999\|Ga0311339_11371377	Not Available	637	Open in IMG/M
3300030225\|Ga0302196_10107810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1570	Open in IMG/M
3300030294\|Ga0311349_10633203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1010	Open in IMG/M
3300030520\|Ga0311372_12765135	Not Available	540	Open in IMG/M
3300031164\|Ga0307502_10013506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1418	Open in IMG/M
3300031234\|Ga0302325_10023158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12963	Open in IMG/M
3300031670\|Ga0307374_10233494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1258	Open in IMG/M
3300031708\|Ga0310686_102990133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1683	Open in IMG/M
3300031723\|Ga0318493_10694604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	570	Open in IMG/M
3300031962\|Ga0307479_10774210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	936	Open in IMG/M
3300032160\|Ga0311301_10283771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2676	Open in IMG/M
3300032805\|Ga0335078_10601299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1387	Open in IMG/M
3300032895\|Ga0335074_10409904	Not Available	1464	Open in IMG/M
3300032898\|Ga0335072_10538342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300032898\|Ga0335072_11009058	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032955\|Ga0335076_11434987	Not Available	576	Open in IMG/M
3300033887\|Ga0334790_003778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10486	Open in IMG/M
3300033888\|Ga0334792_078359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	955	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.69%
Host-Associated	Host-Associated	5.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.45%
Aquatic	Environmental → Aquatic	21.24%
Plants	Host-Associated → Plants	4.42%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.60%
Freshwater	Environmental → Aquatic → Freshwater	17.70%
Peat	Environmental → Terrestrial → Peat	7.96%
Sediment	Environmental → Aquatic → Sediment	3.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.96%
Loam	Environmental → Terrestrial → Soil → Loam	6.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Ice	Environmental → Aquatic → Freshwater → Ice	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.19%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	5.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.54%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.54%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083054

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_108933792	3300001686	Soil	VLNPLRSEGEAFRVLLYVIVVFGAIALIALLVQSLT*
Ga0070741_104575422	3300005529	Surface Soil	MLNPLRSEGEAFRLLIYVILVAAVVIALVLGLRAIF*
Ga0070731_107048561	3300005538	Surface Soil	VLNPLRSEEEAFRLLLYVVGFFVVVIALVLIGRAIF*
Ga0070733_102909681	3300005541	Surface Soil	MLNPLRSEGEAFRALLYVIAFFGTIIAIILIARALS*
Ga0070664_1012680282	3300005564	Corn Rhizosphere	VINPLRSEGEAFRFLLYVVAFFAAVILIVLLVRAL*
Ga0070762_104538982	3300005602	Soil	MRNPLRSEGDMFRLLLYVIAVFGAIIAVIVIVRALR*
Ga0075017_1002395063	3300006059	Watersheds	MRNPLRSEGDMFRLLLWVIAVFAVIIAVVVIARAL*
Ga0075017_1007148911	3300006059	Watersheds	MLNPLRSEADAFRVLLYVIAVFGTLIAIILIARAL*
Ga0070712_1004162263	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VLNPLRSEGEAFRLLLYVLGVVAIAIAAILIVRAVS*
Ga0075522_100780452	3300006638	Arctic Peat Soil	LLNPLRSEGDAFRLLLYVIAVFGAIIAIILIARAL*
Ga0075522_101009183	3300006638	Arctic Peat Soil	MRNPLRSEGEMFRLLLYVIAVFGTIIAIIVIVRALR*
Ga0075521_104066912	3300006642	Arctic Peat Soil	VLNPLRSEGEAFKLLLYVLVVAAAVVALILILRAIL*
Ga0079221_107934512	3300006804	Agricultural Soil	VFNPLRSEGEAFRLLLYVLVIAIVVIGVVLLLRAT*
Ga0079219_105505422	3300006954	Agricultural Soil	MLNPLRSEGDAFRLLWYVVAVFAAIVIIVLLIRAFS*
Ga0116215_10709771	3300009672	Peatlands Soil	MRNPLRSEGDMFRLLLYVIAVFGTIIAIIVIVRALR*
Ga0116216_102920862	3300009698	Peatlands Soil	MLNPLRSETDAFRLLLYVIAFFGTIILIVVIARAL*
Ga0116219_101916922	3300009824	Peatlands Soil	MRNPLRSEGDMFRLLLYVIVVFGTIIAIIVIVRALR*
Ga0126314_101651263	3300010042	Serpentine Soil	MLNPLDSEQAAFRFLLYAIVFFAIVIAIVLIARLI*
Ga0126318_103574963	3300010152	Soil	MFNPLRSEGDAFRTLLYIIGFFALLIAIVLIARAL*
Ga0074045_101897052	3300010341	Bog Forest Soil	MLNPLRSEGEAFRLLLYVGGVFLVIIVIALVLHALL*
Ga0134125_110926832	3300010371	Terrestrial Soil	VLNPLRSEGEAFRLLVYVLVLTVVVIALVLGLRAIF*
Ga0134128_100504933	3300010373	Terrestrial Soil	MFNPLRSEGEAFQLLLYVIAVAVVVIVLVLGLRAIF*
Ga0136449_1004331883	3300010379	Peatlands Soil	MLNPLRSEGEAFRLLLYVMVVFGTIIAVVLIARAL*
Ga0136449_1038110402	3300010379	Peatlands Soil	MLNPLRSEGEAFRLLLYVIAFFGTIIAIILIARAV*
Ga0136449_1043638151	3300010379	Peatlands Soil	MRNPLRSEGDMFRLLLYVIAVFGTIIAIILIVRALT*
Ga0136623_104762341	3300012045	Polar Desert Sand	VLNPLRSEGEAFRLLLYVLVIAVVIGAIVLIVRAL*
Ga0153952_11328671	3300012176	Attine Ant Fungus Gardens	VLNPLRSEGEMFRLLIYVIAFFAVIIALVLILRAIF*
Ga0150985_1020806303	3300012212	Avena Fatua Rhizosphere	MLNPLDSEQAAFRFLLYAIVFFAIVIAIVLLVRALT*
Ga0150985_1083856852	3300012212	Avena Fatua Rhizosphere	VRFNPLRSEGEAFRLLLYVVAAAVLVIAVVLLARAVT*
Ga0150985_1209846621	3300012212	Avena Fatua Rhizosphere	VFNPLRSEGEAFQLLLYVIVVAAVVIALVLGLRAIF*
Ga0134058_12400971	3300012379	Grasslands Soil	VLNPLRSEGEAFQLLLWVIAAAIAIVIVVEVGRAIF*
Ga0136637_11735531	3300012526	Polar Desert Sand	AAVLNPLRSEGEAFRLLLYVLVIAVVIGAIVLIVRAL*
Ga0136615_100152935	3300012678	Polar Desert Sand	LNPLRSESEAFRLLLYVAVVLGVIVVIVLVARAL*
Ga0164299_114795992	3300012958	Soil	MLNPLRSEGEAFRALLWVVGVAAVIIAIVLIARALF*
Ga0181524_100377851	3300014155	Bog	MLNPLRSEGDAFRVLLYVIAGFAVIIALIEIARAIV*
Ga0181524_103812382	3300014155	Bog	MLNPLRSEGDAFRLLLYVAGVFLTIVVLILAVRAIF*
Ga0181538_104435912	3300014162	Bog	MLNPLRSEGDAFRLLLYVAGVFLAIVVLILAVRAIF*
Ga0181523_103249632	3300014165	Bog	VLNPLRSEGEAFRLLLYVIVFFGLVIAIVVIIRAL*
Ga0181535_100240674	3300014199	Bog	MLNPLRSEGDAFRFLLYVIVVFGSIIAVILIARALS*
Ga0181535_103921452	3300014199	Bog	MLNPLRSESDAFRFLLYVIAVFGTIIAIIVIVRAI*
Ga0181537_109605242	3300014201	Bog	VINPLRSEGEAFRFLLWVIAVFGAIIAIIVIVRAL*
Ga0182018_105285022	3300014489	Palsa	MINPLRSEGDAFRFLLYVIAVFGAIIAIIVIVRAL*
Ga0182016_101541663	3300014493	Bog	MLNPLRSEQDAFRLLIYAIVVFGVIIAVILAARAIF*
Ga0182016_103002471	3300014493	Bog	VINPLGSESEAFRFLLYVIAVFGTIIAIIVIVRAI*
Ga0182024_100380849	3300014501	Permafrost	MRNPLRSEGDMFRLLLYVIAVFGTIIAIIVIARALR*
Ga0182024_102863283	3300014501	Permafrost	MLNPLRSEGEAFRALLYVIAFFGTIIAIVLIARALS*
Ga0182024_105563962	3300014501	Permafrost	MRNPLRSEGDMFRLLLYVIAVFGTIIAVIVIVRALR*
Ga0182024_109084542	3300014501	Permafrost	MRNPLRSEGDMFRLLLYVIGVFGTIIAIIVIARALR*
Ga0182024_115123931	3300014501	Permafrost	LNPLRSEGEAFRALLYVIAFFGTIIAIILIARALS*
Ga0182024_129524992	3300014501	Permafrost	MRNPLRSEGDMFRLLLYVIAVFGTIIAIIIIVRALR*
Ga0181516_106692482	3300014655	Bog	VINPLRSEGEAFRFLLYVIAVFGAIIAIIVIVRAL*
Ga0182030_100429872	3300014838	Bog	MLNPLRSESDAFRLLLYVIAVFGTIIAIIVIARAL*
Ga0182030_112472942	3300014838	Bog	MLNPLRSEGEAFRLLLYVIVFFGLVIAIVLIARAL*
Ga0167639_10129552	3300015080	Glacier Forefield Soil	LNPLRSEGEAFRLLIYAIAFFAVVIALILIGRAIF*
Ga0167623_10391072	3300015161	Glacier Forefield Soil	VNPLRSEGEAFRFLLYVIGVFLVLTAIVVIARAL*
Ga0167647_10011411	3300015199	Glacier Forefield Soil	MLNPLRSEGEAFRFVIYVAVFFGVLIAVVVIARAV*
Ga0187802_102648712	3300017822	Freshwater Sediment	VLNPLRSEGDAFRLLLYAIAVTGVIAALVIILRAIL
Ga0187854_100964242	3300017938	Peatland	MLNPLRSEGDAFRVLLYVIAGFAVIIALIEIARAIV
Ga0187847_100590963	3300017948	Peatland	MLNPLRSEGDAFRFLLYVIVVFGSIIAVILIARALS
Ga0187867_105363562	3300018033	Peatland	VLNPLRSEGDAFRVLLYVIAGFAVIIALIEIARALS
Ga0187863_102485382	3300018034	Peatland	GWSGRRVINPLRSEGDAFRFLLYVIAVFGAIIAIIVIVRAL
Ga0187871_102047642	3300018042	Peatland	VINPLRSEGDAFRFLLYVIAVFGAIIAIIVIVRAL
Ga0187887_100204604	3300018043	Peatland	MINPLRSEGDAFRFLLYVIVVFGSIIAVILIARALS
Ga0187859_100267334	3300018047	Peatland	VINPLRSEGEAFRFLLWVIAVFGAIIAIIVIVRAL
Ga0190265_103149982	3300018422	Soil	VLNPLRSEGEAFRFLLYVAVTVGVITATILILRAIL
Ga0210399_101032393	3300020581	Soil	VLNPLRSEGEMFRLLLYVIVVFAVIIAAILILRAIF
Ga0210401_104825271	3300020583	Soil	MLNPLRSEAEMFRLLLYVIVVFGVIIAAILIARAIF
Ga0210408_1000597910	3300021178	Soil	MLNPLRSEGEMFRLLIYVVVVFAVIIAAILILRAI
Ga0210396_1000061529	3300021180	Soil	MLNPLRSEGEMFRALIYVIVFFALVIALVLIGRAIF
Ga0210388_104045992	3300021181	Soil	VLNPLRSEGEAFRLLIYAIAFFAVVIALVLIGRAIF
Ga0210397_100247204	3300021403	Soil	MPNPLRSEGEMFRLLLYVIVVFAVLIAAILIVRAIS
Ga0210389_101335513	3300021404	Soil	LLNPLRSEGEAFRLLIYAIAFFAIVIALVLIGRAIF
Ga0210394_107890542	3300021420	Soil	MLNPLRSEGEMFRLLLYVIVVFAVLIAAILIVRAIT
Ga0210391_104251672	3300021433	Soil	VLNPLRSEGEMFRLLVYVIVAFAVIIALILVLRAIF
Ga0210391_105369322	3300021433	Soil	MLNPLRSEGDAFRVLLYVIAGFAVIIALIEIVRALS
Ga0210390_114952802	3300021474	Soil	VLNPLRSEGEMFRLLLYVVVAFAVIIALILIVRAIF
Ga0208715_10113373	3300025482	Arctic Peat Soil	VLNPLRSEGEAFKLLLYVLVVAAAVVALILILRAIL
Ga0208586_11015672	3300025588	Arctic Peat Soil	MRNPLRSEGDMFRLLLYVIAVFGAIIAVIVIVRALR
Ga0208220_10693151	3300025627	Arctic Peat Soil	MRNPLRSEGEMFRLLLYVIAVFGTIIAIIVIVRALR
Ga0209483_10725832	3300025862	Arctic Peat Soil	LLNPLRSEGDAFRLLLYVIAVFGAIIAIILIARAL
Ga0207708_104545761	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VINPLRSEGEAFRFLLYVVAFFAAVILIVLLVRAL
Ga0209167_102871831	3300027867	Surface Soil	MLNPLRGEGEAFRALLFVIAFFGTIIAIILIARALSCRFLAGSY
Ga0209380_106567702	3300027889	Soil	MLNPLRSEGEAFRALLYVIAFFGTIIAIILIARALS
Ga0209415_100380327	3300027905	Peatlands Soil	MLNPLRSETDAFRLLLYVIAFFGTIILIVVIARAL
Ga0209415_100981844	3300027905	Peatlands Soil	MRNPLRSEGDMFRLLLYVIAVFGTIIAIIVIVRALR
Ga0209415_101229601	3300027905	Peatlands Soil	MLNPLRSEGEAFRLLLYVIAFFGTIIAIILIARAV
Ga0209006_100485852	3300027908	Forest Soil	VLNPLRSEGEAFRLLIYAIVFFAIVIALVLILRAVL
Ga0209698_100950851	3300027911	Watersheds	MLNPLRSEGEAFRLLLYVIAFFGTIIAIVLIARAV
Ga0209698_106157362	3300027911	Watersheds	MRNPLRSEGDMFRLLLWVIAVFAVIIAVVVIARAL
Ga0209526_104071942	3300028047	Forest Soil	MRNPLRSEGDAFRFLLWVIAVFGTLIAIIVIVRAF
Ga0302151_100205073	3300028562	Bog	MLNPLRSESDAFRLLLYVIAVFGTIIAIIVIARAL
Ga0302202_101069984	3300028762	Bog	LMLNPLRSESDAFRLLLYVIAVFGTIIAIIVIARAL
Ga0265338_109018332	3300028800	Rhizosphere	VLNPLRSEGEAFRLLLWVIVVFGLIIAVVLIARAV
Ga0311339_113713771	3300029999	Palsa	MLNPLRSEADAFKFLLYVIAFFGTIIAIILIARYA
Ga0302196_101078102	3300030225	Bog	MLNPLRSESDAFRLLLYVIAVFGTIIAIVLIVRAI
Ga0311349_106332031	3300030294	Fen	MLNPLRSEGDAFRLLWYVVAVFAAIVAVGLLIRAFS
Ga0311372_127651352	3300030520	Palsa	RVINPLRSEGAAFRFLLYVLAVFGAIIAIIVIVRAL
Ga0307502_100135063	3300031164	Soil	MLNPLRSEGEAFRFLIYVAIFFGVLTAIVLIARTL
Ga0302325_100231585	3300031234	Palsa	MINPLRSEGDAFRFLLYVIAVFGAIIAIIVIVRAL
Ga0272433_102947672	3300031450	Rock	VLNPLRSEGEAFRLLLYVLVIAVVIGAIVLIVRAL
Ga0307374_102334944	3300031670	Soil	MRNPLRSEGEMFRLLLYVIAVFGTIIAIIIIVRALR
Ga0310686_1029901332	3300031708	Soil	MLNPLRSEGEAFRLLLYVIVFFGLIIAIVLIARAL
Ga0318493_106946042	3300031723	Soil	MLNPLRSEGEAFRLLLYVAAVAGVVIAVVLIVRAVS
Ga0307479_107742102	3300031962	Hardwood Forest Soil	VLNPLRSEREAFRFLLYVVAVFGAIIAIVLIVRAF
Ga0311301_102837715	3300032160	Peatlands Soil	MLNPLRSEGEAFRLLLYVMVVFGTIIAVVLIARAL
Ga0335078_106012992	3300032805	Soil	VLNPLRSEGDAFRVLLYVIAGFAVIIALIEILRAIL
Ga0335074_104099044	3300032895	Soil	VLNPLRSEGDAFKFLLYVIAVFGFVIAIVLIARYA
Ga0335072_105383422	3300032898	Soil	VLNPIRSEAEAFKALLYVVAVFAVIIAIILIARAL
Ga0335072_110090582	3300032898	Soil	VFNPLRSEGDAFRLLLYVIAFFGVVIAIVVIVRAV
Ga0335083_101198253	3300032954	Soil	VLNPLRSEGEAFRLLIYVLVVAVAVIVLVLALRAIF
Ga0335076_114349872	3300032955	Soil	AVLNPLRSEGDAFRVLLYVVAVVGVLLIIGLILRAVL
Ga0334790_003778_5925_6032	3300033887	Soil	MLNPLHSEGEAFRLLLYVIAVFGTIIAIVLIVRAL
Ga0334792_078359_268_375	3300033888	Soil	MLNPLRSEGDAFRLLLYVIAVFGTIIAIILIARAL

Hidden Markov Model


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