Metagenome / Metatranscriptome Family F083056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	78 residues
Representative Sequence	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN
Number of Associated Samples	81
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.59 %
% of genes near scaffold ends (potentially truncated)	30.09 %
% of genes from short scaffolds (< 2000 bps)	91.15 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.177 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (30.088 % of family members)
Environment Ontology (ENVO)	Unclassified (49.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.027 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.10% β-sheet: 40.96% Coil/Unstructured: 34.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00313	CSD	3.54
PF03358	FMN_red	3.54
PF13610	DDE_Tnp_IS240	2.65
PF13649	Methyltransf_25	1.77
PF07592	DDE_Tnp_ISAZ013	1.77
PF00072	Response_reg	0.88
PF00881	Nitroreductase	0.88
PF00486	Trans_reg_C	0.88
PF00083	Sugar_tr	0.88
PF03350	UPF0114	0.88
PF00924	MS_channel	0.88
PF00144	Beta-lactamase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.88
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	0.88
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
All Organisms	root	All Organisms	39.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
cellular organisms	root	All Organisms → cellular organisms	39.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.77 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.77 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.27 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.08 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.08 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.88 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.08 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Aliidongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia	0.88 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.88 %
Methylopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.08 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.88 %
unclassified Methylopila	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila	0.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.08 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.77 %
Methylopila sp. M107	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. M107	0.88 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.88 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10061099	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300003505\|JGIcombinedJ51221_10033667	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300004091\|Ga0062387_100536678	Not Available	825	Open in IMG/M
3300004268\|Ga0066398_10193978	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300004633\|Ga0066395_10573166	Not Available	659	Open in IMG/M
3300005332\|Ga0066388_100445680	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1936	Open in IMG/M
3300005332\|Ga0066388_101877459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300005363\|Ga0008090_14289096	Not Available	757	Open in IMG/M
3300005434\|Ga0070709_10986698	Not Available	669	Open in IMG/M
3300005435\|Ga0070714_100426062	Not Available	1257	Open in IMG/M
3300005435\|Ga0070714_100781638	Not Available	924	Open in IMG/M
3300005437\|Ga0070710_10270068	Not Available	1099	Open in IMG/M
3300005602\|Ga0070762_10627832	Not Available	715	Open in IMG/M
3300005764\|Ga0066903_101438663	Not Available	1297	Open in IMG/M
3300005764\|Ga0066903_101815030	Not Available	1165	Open in IMG/M
3300006175\|Ga0070712_100352106	Not Available	1206	Open in IMG/M
3300006175\|Ga0070712_101624502	Not Available	565	Open in IMG/M
3300007788\|Ga0099795_10534173	Not Available	551	Open in IMG/M
3300009143\|Ga0099792_10610402	Not Available	696	Open in IMG/M
3300009792\|Ga0126374_10249926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300009792\|Ga0126374_10420934	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300010043\|Ga0126380_10072831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1957	Open in IMG/M
3300010043\|Ga0126380_10236716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300010043\|Ga0126380_12018432	Not Available	528	Open in IMG/M
3300010046\|Ga0126384_10601615	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	962	Open in IMG/M
3300010046\|Ga0126384_11706465	Not Available	596	Open in IMG/M
3300010046\|Ga0126384_12285990	Not Available	522	Open in IMG/M
3300010047\|Ga0126382_11454678	Not Available	628	Open in IMG/M
3300010048\|Ga0126373_10260316	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300010048\|Ga0126373_10373879	Not Available	1443	Open in IMG/M
3300010048\|Ga0126373_11222233	Not Available	817	Open in IMG/M
3300010343\|Ga0074044_10163847	Not Available	1485	Open in IMG/M
3300010358\|Ga0126370_10287199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1297	Open in IMG/M
3300010358\|Ga0126370_11035803	Not Available	752	Open in IMG/M
3300010359\|Ga0126376_10130931	Not Available	1975	Open in IMG/M
3300010359\|Ga0126376_10430085	Not Available	1199	Open in IMG/M
3300010361\|Ga0126378_10876831	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300010361\|Ga0126378_12605565	Not Available	578	Open in IMG/M
3300010362\|Ga0126377_10354096	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300010366\|Ga0126379_11966845	Not Available	687	Open in IMG/M
3300010376\|Ga0126381_100104252	All Organisms → cellular organisms → Bacteria	3629	Open in IMG/M
3300010376\|Ga0126381_100370519	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300010376\|Ga0126381_101152586	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300010376\|Ga0126381_105074584	Not Available	504	Open in IMG/M
3300010396\|Ga0134126_12849873	Not Available	524	Open in IMG/M
3300010398\|Ga0126383_10858165	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300012582\|Ga0137358_10724743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	664	Open in IMG/M
3300012948\|Ga0126375_10766006	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300012971\|Ga0126369_10695685	Not Available	1093	Open in IMG/M
3300012971\|Ga0126369_11716490	Not Available	717	Open in IMG/M
3300012984\|Ga0164309_11364978	Not Available	603	Open in IMG/M
3300016270\|Ga0182036_10881687	Not Available	733	Open in IMG/M
3300016294\|Ga0182041_10072838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2423	Open in IMG/M
3300016319\|Ga0182033_11134995	Not Available	699	Open in IMG/M
3300016341\|Ga0182035_10507654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300016422\|Ga0182039_10313810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300020581\|Ga0210399_11559469	Not Available	510	Open in IMG/M
3300020583\|Ga0210401_10144610	All Organisms → cellular organisms → Bacteria → Proteobacteria	2223	Open in IMG/M
3300020583\|Ga0210401_11464179	Not Available	540	Open in IMG/M
3300021171\|Ga0210405_10162007	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300021171\|Ga0210405_10269890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	1345	Open in IMG/M
3300021181\|Ga0210388_10794441	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300021401\|Ga0210393_10235643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1483	Open in IMG/M
3300021403\|Ga0210397_10463515	Not Available	955	Open in IMG/M
3300021405\|Ga0210387_10243925	Not Available	1570	Open in IMG/M
3300021405\|Ga0210387_11623422	Not Available	550	Open in IMG/M
3300021478\|Ga0210402_10851719	Not Available	838	Open in IMG/M
3300021560\|Ga0126371_10439966	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300021560\|Ga0126371_10812370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1081	Open in IMG/M
3300021560\|Ga0126371_12098281	Not Available	681	Open in IMG/M
3300021560\|Ga0126371_12245717	Not Available	659	Open in IMG/M
3300021560\|Ga0126371_12269214	Not Available	655	Open in IMG/M
3300021560\|Ga0126371_12596237	Not Available	614	Open in IMG/M
3300022527\|Ga0242664_1111404	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300024288\|Ga0179589_10179542	Not Available	917	Open in IMG/M
3300025898\|Ga0207692_10289333	Not Available	994	Open in IMG/M
3300025916\|Ga0207663_10448437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300025928\|Ga0207700_11078808	Not Available	718	Open in IMG/M
3300026078\|Ga0207702_11812830	Not Available	602	Open in IMG/M
3300026998\|Ga0208369_1007472	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300027654\|Ga0209799_1125682	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300027767\|Ga0209655_10014405	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300027874\|Ga0209465_10418653	Not Available	670	Open in IMG/M
3300027903\|Ga0209488_10150096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300027903\|Ga0209488_10629930	Not Available	775	Open in IMG/M
3300031231\|Ga0170824_123791247	Not Available	787	Open in IMG/M
3300031545\|Ga0318541_10051053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. M107	2123	Open in IMG/M
3300031545\|Ga0318541_10698974	Not Available	566	Open in IMG/M
3300031546\|Ga0318538_10456953	Not Available	692	Open in IMG/M
3300031572\|Ga0318515_10569486	Not Available	603	Open in IMG/M
3300031708\|Ga0310686_102653301	Not Available	542	Open in IMG/M
3300031723\|Ga0318493_10692891	Not Available	571	Open in IMG/M
3300031744\|Ga0306918_10221338	Not Available	1435	Open in IMG/M
3300031744\|Ga0306918_11257857	Not Available	570	Open in IMG/M
3300031890\|Ga0306925_10055755	All Organisms → cellular organisms → Bacteria → Proteobacteria	4129	Open in IMG/M
3300031890\|Ga0306925_10430905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1411	Open in IMG/M
3300031942\|Ga0310916_10316393	Not Available	1323	Open in IMG/M
3300031946\|Ga0310910_10390011	Not Available	1103	Open in IMG/M
3300031946\|Ga0310910_11159623	Not Available	600	Open in IMG/M
3300031947\|Ga0310909_10148587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1925	Open in IMG/M
3300031954\|Ga0306926_12585536	Not Available	554	Open in IMG/M
3300032001\|Ga0306922_10436392	Not Available	1400	Open in IMG/M
3300032041\|Ga0318549_10550559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300032044\|Ga0318558_10534324	Not Available	586	Open in IMG/M
3300032055\|Ga0318575_10382722	Not Available	714	Open in IMG/M
3300032059\|Ga0318533_10063800	All Organisms → cellular organisms → Bacteria → Proteobacteria	2483	Open in IMG/M
3300032063\|Ga0318504_10268999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300032174\|Ga0307470_10506056	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300032205\|Ga0307472_101855610	Not Available	600	Open in IMG/M
3300032261\|Ga0306920_100125284	All Organisms → cellular organisms → Bacteria	3819	Open in IMG/M
3300033289\|Ga0310914_10543456	Not Available	1050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.35%
Aquatic	Environmental → Aquatic	1.77%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.35%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.88%
Loam	Environmental → Terrestrial → Soil → Loam	18.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.77%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	30.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100610992	3300001545	Forest Soil	MMTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
JGIcombinedJ51221_100336671	3300003505	Forest Soil	TETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0062387_1005366782	3300004091	Bog Forest Soil	MMDQEQGTTTVEARASVVEFVDVEVIDDRGPKVLVKLGQINNGEQVDVAVVVMAPELAKILSAKLADATFEANWGPLLRISSN*
Ga0066398_101939782	3300004268	Tropical Forest Soil	ISAAVVEFADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0066395_105731661	3300004633	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN*
Ga0066388_1004456803	3300005332	Tropical Forest Soil	MMDQEQGTTTVSIVRFVDVQVIDNGGPKVLLRLGQINNGEPVDVAVIVMPPELAKILSAKLADATFEANWSPLLRISSN*
Ga0066388_1018774592	3300005332	Tropical Forest Soil	LLHKKDVEQGTTTVEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN*
Ga0008090_142890962	3300005363	Tropical Rainforest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWSPILRIYSN*
Ga0070709_109866981	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMDQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADAIFEANWGPLLWIS*
Ga0070714_1004260622	3300005435	Agricultural Soil	MDQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADAIFEANWGPLLWIS*
Ga0070714_1007816381	3300005435	Agricultural Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0070710_102700682	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMDQAQGATTASIVRFVDVQVIDNHGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADAIFEANWGPLLWIS*
Ga0070762_106278323	3300005602	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEIDNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0066903_1014386634	3300005764	Tropical Forest Soil	MTDQEQGTTTMEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN*
Ga0066903_1018150303	3300005764	Tropical Forest Soil	MTDREQGTTTVEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN*
Ga0070712_1003521061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMTETGKISAAVVEFADVQVIDDDGPKVLVRLSEINNGEPVDVAVVVMDPELANILSAKLAEATFEANWGPILRISSN*
Ga0070712_1016245021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0099795_105341731	3300007788	Vadose Zone Soil	MMDQEQGTTTVEARASIVGFVHVEVIDDGGPKVLVKLGQINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0099792_106104022	3300009143	Vadose Zone Soil	MMDQEQGTTTVEARASIVEFVHVEVIDDGGPKVLVKLGQINNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPIL
Ga0126374_102499261	3300009792	Tropical Forest Soil	MTDQEQGTTIVERRASIVGFVDVQVIDDSGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSK*
Ga0126374_104209342	3300009792	Tropical Forest Soil	MTETGRISAAVVEFADVQVIADDEPKVLVKLGEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126380_100728313	3300010043	Tropical Forest Soil	MMTETGKISAAVVECADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0126380_102367163	3300010043	Tropical Forest Soil	AVVEFADVQVIGDDGPKVLVRLSEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126380_120184321	3300010043	Tropical Forest Soil	MDQEQGTPTRRGCASIVKFVDVEVIDDGGPQVFMRLGQINDGEPVDVVAVVMAPELAKMLSAKLADAAFEANWEPI
Ga0126384_106016152	3300010046	Tropical Forest Soil	MMKRGMMTETGRISAAVVEFADVQVIADDGPKVLVRLSEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126384_117064651	3300010046	Tropical Forest Soil	MMDQEQGTTTVSIVRFVDVQVIDNGGPKVLLRLGQINNREPVDVAVIVMAPELAKILSAKLADATFEANRGPLLRISSN*
Ga0126384_122859901	3300010046	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN*
Ga0126382_114546782	3300010047	Tropical Forest Soil	MMTETGKICAAVVEFADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0126373_102603162	3300010048	Tropical Forest Soil	MMGQEQGTTTASIVRFVDVQVVDNGGPKVLVRLGQINNGEPVDVALVVMSPELAKILSAKLADATFEANWGPLLGISSN*
Ga0126373_103738794	3300010048	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVVDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADATLEANWGPLLRIYSN*
Ga0126373_112222332	3300010048	Tropical Forest Soil	MTDQEQSTTTAEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAF
Ga0074044_101638472	3300010343	Bog Forest Soil	MMDQEQGTTTVEARASIVEFVDVEVIDDRGPKVLVKLGQNNNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPLLRISSN*
Ga0126370_102871991	3300010358	Tropical Forest Soil	GTTTVSIVRFVDVQVIDNGGPKVLLRLGQINNGEPVDVAVIVMAAELAKILSAKLADATFEANWGPLLRISSN*
Ga0126370_110358031	3300010358	Tropical Forest Soil	MMTETGKISAAVVEFADVQVIADDGPKVLVRLSEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0126376_101309313	3300010359	Tropical Forest Soil	MMTETGRISAVVVEFADVQVIADDGPKVLVRLSEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126376_104300852	3300010359	Tropical Forest Soil	MMTETGKISAAVVECADVQVIADDGPKVLVRLGETNNGKPMDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126378_108768313	3300010361	Tropical Forest Soil	GAKMMGQEQGTTTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPLDVALVVMAPELAKILSAKLADATFEANWGPLLWISSN*
Ga0126378_126055652	3300010361	Tropical Forest Soil	MTETGRISAAVVEFADVQVIADDGPKVLVRLSEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0126377_103540961	3300010362	Tropical Forest Soil	MTETGKISAAVVECADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126379_119668453	3300010366	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLL
Ga0126381_1001042527	3300010376	Tropical Forest Soil	MMTETGKISAAVVEFADVQVIADDEPKVLVKLGEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126381_1003705193	3300010376	Tropical Forest Soil	MMGQEQGTTTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPLDVALVVMAPELAKILSAKLADATFEANWGPLLGISSN*
Ga0126381_1011525862	3300010376	Tropical Forest Soil	MTETGKISAAVVEFADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0126381_1050745841	3300010376	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNSEPVDVAVVVMAPETANILSAKLADAAFEANWGPLL
Ga0134126_128498732	3300010396	Terrestrial Soil	MMAQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADAIFEANWGPLLWIS*
Ga0126383_108581652	3300010398	Tropical Forest Soil	MMTETEKISAAVVECADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN*
Ga0137358_107247432	3300012582	Vadose Zone Soil	MMDQEQGTTTVEARASIVEFVHVEVIDDGGPKVLVKLGQNNNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPLLRISSN*
Ga0126375_107660063	3300012948	Tropical Forest Soil	MTETGKISAAVVEFADVQVIADDGPKVLVRLSEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN*
Ga0126369_106956852	3300012971	Tropical Forest Soil	QEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNSEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN*
Ga0126369_117164902	3300012971	Tropical Forest Soil	LDQEQGTTTASIVRFAYVQVIDNGGPKVLVRLGQINNGEPVDVVVVMAPELAKILSAKLADATFEANWAPLLRISSN*
Ga0164309_113649783	3300012984	Soil	MMDQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGETVDVAVVVVAPELAKILWAKLADAIFEANWGPLL
Ga0182036_108816871	3300016270	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0182041_100728384	3300016294	Soil	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0182033_111349951	3300016319	Soil	VKGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0182035_105076541	3300016341	Soil	MTDQEQGLTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0182039_103138103	3300016422	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLAD
Ga0210399_115594692	3300020581	Soil	MTETGKISTAVVEFADVQVIDDDGPKVLVRLGEINNGGPVDVAVVVMAPELANILSAKLAEATFEANWG
Ga0210401_101446102	3300020583	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEENWGPILRISSN
Ga0210401_114641791	3300020583	Soil	MMDQAQGTTTASIVRFVDVQVIDNGGPKVLVRLGQINNGEQVDVAVVVMAPELAKILSAKLADATFEANWGPLL
Ga0210405_101620073	3300021171	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEIDNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0210405_102698904	3300021171	Soil	EAALDDEGMMTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0210388_107944411	3300021181	Soil	MMKRGMMTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAMVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0210393_102356433	3300021401	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAMVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0210397_104635154	3300021403	Soil	MTETGKISTAVVEFADVQVIDDDGPKVLVRLGEINNGGPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0210387_102439254	3300021405	Soil	MTETGKISTAVVEFADVQVIDDDGPKVLVRLGEINNGGPVDVAVVVMAPELANILSAKLAEATFEANWGP
Ga0210387_116234222	3300021405	Soil	MMDQAQGATTASMVRFVDVQVIDNGGPKVLVRLGQINNGETVDVAVVVMAPELAKILSAKLADATFEANWGPLLWIS
Ga0210386_112715701	3300021406	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEQVDVAVVVMAPELANILSAKLAEATFEA
Ga0210402_108517193	3300021478	Soil	MMDQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGEQVDVAVVVMAPELAKILSAKLADATFEANWGPLL
Ga0126371_104399661	3300021560	Tropical Forest Soil	VPIPPGAERGVAKMMGQEQGTTTASIVRFVDVQVIDNGGPKVLVRLGQIKNGEPVDVALVVMAPELAKILSAKLADATFEANWGPLLRISSN
Ga0126371_108123703	3300021560	Tropical Forest Soil	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0126371_120982811	3300021560	Tropical Forest Soil	MMKRGNMTETGKISAAVVEFADVQVVAVDGPKVLVRLGEINSGKPVDVAVVVMAPELANILSAKLAEATFEVNWGPILRIF
Ga0126371_122457171	3300021560	Tropical Forest Soil	MTETGKISAAVVEFADVQVIADDEPKVLVKLGEINNGKPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0126371_122692143	3300021560	Tropical Forest Soil	MTDQEQGTTTMEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0126371_125962372	3300021560	Tropical Forest Soil	MMGQEQGTTTASIVRFVDVQVIDNGGPKVLVRFGQINNGEPVDVALVVMAPELAKILSAKLADATFEANWGPLLGISSN
Ga0242664_11114042	3300022527	Soil	MMTETGKIRAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAMVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0179589_101795422	3300024288	Vadose Zone Soil	MTEAGKISAAVVEFADVQVIDDDGPKVLVRLGEFNNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0207692_102893333	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MMDQAQGATTASIVRFVDVQVIDNHGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADAIFEANWGPLLWIS
Ga0207663_104484372	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMTETGKISAAVVEFADVQVIDDDGPKVLVRHGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0207700_110788081	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MMTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEAAFEANWGPILRISSN
Ga0207702_118128302	3300026078	Corn Rhizosphere	MMDQAQGATTASIVRFVDVQVIDNGGPKVLVRLGQINNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPLLWIS
Ga0208369_10074721	3300026998	Forest Soil	MMTETGKISAAVVEFADVQVIDDDGPKVLVRLGEIDNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0209799_11256822	3300027654	Tropical Forest Soil	MTETGKISAAVVEFADVQVIADDGPKVLVRLGEINNGKPVDVAVVVMAPELANVLSAKLAEATFEANWGPILRISSN
Ga0209655_100144052	3300027767	Bog Forest Soil	MMDQEQGTTTVEARASIVEFVDVEVIDDRGPKVLVKLRQINNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPLLRISSN
Ga0209465_104186531	3300027874	Tropical Forest Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0209488_101500961	3300027903	Vadose Zone Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVEVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0209488_106299302	3300027903	Vadose Zone Soil	MMDQEQGTTTVEARASIVEFVGGPKVLVKLGQINNGEPVDVAVVVMAPELAKILSAKLADATFEANWGPLLRISSN
Ga0170824_1237912471	3300031231	Forest Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEASFEANWGPILRISSN
Ga0318541_100510531	3300031545	Soil	MTDQGRGTTTVEGRASIVGFVDVRVIDDGGAKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0318541_106989741	3300031545	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANMLSAKLADAAFEANWGPLLRIYSN
Ga0318538_104569531	3300031546	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0318515_105694861	3300031572	Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGP
Ga0310686_1026533012	3300031708	Soil	MTETGKISAAVVEFADVQVIDDDGPKVLVRLGEINNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRI
Ga0318493_106928912	3300031723	Soil	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0306918_102213381	3300031744	Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0306918_112578571	3300031744	Soil	MTDQEPGTTIVEGRVSIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0306925_100557551	3300031890	Soil	ASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0306925_104309051	3300031890	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDA
Ga0310916_103163931	3300031942	Soil	SIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0310916_103886751	3300031942	Soil	VGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0310910_103900112	3300031946	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0310910_111596231	3300031946	Soil	RASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0310909_101485874	3300031947	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANMLSAKLADAAFE
Ga0306926_125855362	3300031954	Soil	MTDQGRGTTTVEGRASIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0306922_104363923	3300032001	Soil	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDAN
Ga0318549_105505591	3300032041	Soil	IVEGRVSIVGFVDVQVIDDGGPKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0318558_105343241	3300032044	Soil	MTDQEQGTTTVKGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN
Ga0318575_103827222	3300032055	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDA
Ga0318533_100638004	3300032059	Soil	MTDQEQGTTTVEGRASIVGFVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDATWGPLLRIYSN
Ga0318504_102689991	3300032063	Soil	MMDHEQDTTTASIVRFVDVQVIHDGGPKVLVRLSQSNNGEPVDVAVVVMAPELANILSAKLADATFEANWSPLLRISSN
Ga0307470_105060562	3300032174	Hardwood Forest Soil	MTEAGKISAAVVEFADVQVIDDDGPKVLVRLGEFNNGEPVDVAVVVMAPELAKILSAKLAEATFEANWGPILRISSN
Ga0307472_1018556101	3300032205	Hardwood Forest Soil	MTETGKINAAVVEFADVQVIDDDGPKVLVRLGEFNNGEPVDVAVVVMAPELANILSAKLAEATFEANWGPILRISSN
Ga0306920_1001252844	3300032261	Soil	MTDQEQGTTTVKGRASIVGVVDVQVIDDGGAKVLVRLGQINNGEPVDVAVVVMAPETANILSAKLADAAFDANWGPLLRIYSN
Ga0310914_105434562	3300033289	Soil	TTTVEGRASIVGFVDVRVIDDGGAKVLVRLGQINNGEPVDVAVLVMAPETANILSAKLADAAFEANWGPLLRIYSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences