Metagenome Family F083145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083145
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	82 residues
Representative Sequence	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Number of Associated Samples	84
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.28 %
% of genes near scaffold ends (potentially truncated)	28.32 %
% of genes from short scaffolds (< 2000 bps)	72.57 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.920 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.743 % of family members)
Environment Ontology (ENVO)	Unclassified (32.743 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.292 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 16.07% Coil/Unstructured: 58.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00296	Bac_luciferase	7.96
PF13450	NAD_binding_8	6.19
PF13407	Peripla_BP_4	6.19
PF00743	FMO-like	4.42
PF01545	Cation_efflux	3.54
PF08241	Methyltransf_11	2.65
PF13505	OMP_b-brl	2.65
PF00196	GerE	1.77
PF01564	Spermine_synth	1.77
PF00593	TonB_dep_Rec	1.77
PF13738	Pyr_redox_3	1.77
PF01799	Fer2_2	1.77
PF00989	PAS	0.88
PF13458	Peripla_BP_6	0.88
PF04199	Cyclase	0.88
PF00034	Cytochrom_C	0.88
PF00903	Glyoxalase	0.88
PF14255	Cys_rich_CPXG	0.88
PF00111	Fer2	0.88
PF02350	Epimerase_2	0.88
PF06808	DctM	0.88
PF07883	Cupin_2	0.88
PF03773	ArsP_1	0.88
PF13378	MR_MLE_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	7.96
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	4.42
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	3.54
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	3.54
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	3.54
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.88
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	59.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.81 %
Unclassified	root	N/A	7.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.77 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	59.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.39 %
Unclassified	root	N/A	7.08 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	59.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.96 %
Unclassified	root	N/A	7.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	22.12 %
Unclassified	root	N/A	7.08 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	6.19 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.88 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.12 %
Unclassified	root	N/A	7.08 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	5.31 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Enhydrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.12 %
Unclassified	root	N/A	7.08 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	5.31 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	0.88 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101889337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1463	Open in IMG/M
3300003324\|soilH2_10195654	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005093\|Ga0062594_101611267	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005167\|Ga0066672_10190423	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300005171\|Ga0066677_10289178	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005175\|Ga0066673_10057015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1988	Open in IMG/M
3300005176\|Ga0066679_10057825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2256	Open in IMG/M
3300005176\|Ga0066679_10927716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300005177\|Ga0066690_10061667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2320	Open in IMG/M
3300005178\|Ga0066688_10082097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1937	Open in IMG/M
3300005178\|Ga0066688_10180759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1332	Open in IMG/M
3300005180\|Ga0066685_10261860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300005180\|Ga0066685_10963791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300005332\|Ga0066388_107666762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300005445\|Ga0070708_100072249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3108	Open in IMG/M
3300005445\|Ga0070708_100484669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1166	Open in IMG/M
3300005446\|Ga0066686_11032436	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	532	Open in IMG/M
3300005447\|Ga0066689_10510403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300005447\|Ga0066689_10973326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	523	Open in IMG/M
3300005450\|Ga0066682_10342507	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005451\|Ga0066681_10257137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1061	Open in IMG/M
3300005468\|Ga0070707_101079728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	768	Open in IMG/M
3300005518\|Ga0070699_100122618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2287	Open in IMG/M
3300005518\|Ga0070699_100127939	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300005536\|Ga0070697_100273333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1449	Open in IMG/M
3300005549\|Ga0070704_100276349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300005559\|Ga0066700_11157338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300005568\|Ga0066703_10082746	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300006031\|Ga0066651_10639222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	568	Open in IMG/M
3300006049\|Ga0075417_10030094	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2244	Open in IMG/M
3300006049\|Ga0075417_10167452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1029	Open in IMG/M
3300006058\|Ga0075432_10537802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300006173\|Ga0070716_100646721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	801	Open in IMG/M
3300006173\|Ga0070716_101646340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300006796\|Ga0066665_10016204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4524	Open in IMG/M
3300006845\|Ga0075421_101217154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300006852\|Ga0075433_10148157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300006852\|Ga0075433_10269321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1509	Open in IMG/M
3300006871\|Ga0075434_102517275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	516	Open in IMG/M
3300006880\|Ga0075429_100726458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300006904\|Ga0075424_100000893	All Organisms → cellular organisms → Bacteria	24852	Open in IMG/M
3300006904\|Ga0075424_101062797	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300007255\|Ga0099791_10509899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	584	Open in IMG/M
3300007265\|Ga0099794_10005139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	5223	Open in IMG/M
3300009012\|Ga0066710_100197647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2858	Open in IMG/M
3300009038\|Ga0099829_10556808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	953	Open in IMG/M
3300009089\|Ga0099828_10261126	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300009090\|Ga0099827_10791169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	821	Open in IMG/M
3300009094\|Ga0111539_11123626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300009094\|Ga0111539_11124953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	912	Open in IMG/M
3300009137\|Ga0066709_100044014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4944	Open in IMG/M
3300009137\|Ga0066709_102067619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300009147\|Ga0114129_10207650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2649	Open in IMG/M
3300011269\|Ga0137392_10838494	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300012189\|Ga0137388_10434401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1217	Open in IMG/M
3300012203\|Ga0137399_10233789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1503	Open in IMG/M
3300012203\|Ga0137399_10401313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1144	Open in IMG/M
3300012203\|Ga0137399_10422130	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300012205\|Ga0137362_10085890	All Organisms → cellular organisms → Bacteria → Proteobacteria	2632	Open in IMG/M
3300012208\|Ga0137376_11541577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	556	Open in IMG/M
3300012361\|Ga0137360_10955745	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300012361\|Ga0137360_11182981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300012363\|Ga0137390_10763661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	926	Open in IMG/M
3300012582\|Ga0137358_10077911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2229	Open in IMG/M
3300012685\|Ga0137397_10020315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4661	Open in IMG/M
3300012685\|Ga0137397_10101850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2105	Open in IMG/M
3300012685\|Ga0137397_10269421	Not Available	1269	Open in IMG/M
3300012918\|Ga0137396_10063526	All Organisms → cellular organisms → Bacteria → Proteobacteria	2565	Open in IMG/M
3300012918\|Ga0137396_10112482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1955	Open in IMG/M
3300012922\|Ga0137394_10346562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1268	Open in IMG/M
3300012922\|Ga0137394_10660433	Not Available	882	Open in IMG/M
3300012925\|Ga0137419_10287074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1253	Open in IMG/M
3300012925\|Ga0137419_10647299	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012930\|Ga0137407_11653872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300012930\|Ga0137407_11901213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300012944\|Ga0137410_10403747	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300015054\|Ga0137420_1226421	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300015054\|Ga0137420_1427962	Not Available	1288	Open in IMG/M
3300015054\|Ga0137420_1427963	Not Available	788	Open in IMG/M
3300015241\|Ga0137418_10003391	All Organisms → cellular organisms → Bacteria	14645	Open in IMG/M
3300015357\|Ga0134072_10062278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1065	Open in IMG/M
3300015371\|Ga0132258_10711326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2529	Open in IMG/M
3300018433\|Ga0066667_12009542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300018482\|Ga0066669_10124187	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300018482\|Ga0066669_10967050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	767	Open in IMG/M
3300020170\|Ga0179594_10055745	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300020199\|Ga0179592_10104072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1304	Open in IMG/M
3300025325\|Ga0209341_10474183	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300025910\|Ga0207684_10666761	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	885	Open in IMG/M
3300025922\|Ga0207646_10034684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4561	Open in IMG/M
3300025939\|Ga0207665_10242237	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300026295\|Ga0209234_1018213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2655	Open in IMG/M
3300026295\|Ga0209234_1078981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1249	Open in IMG/M
3300026318\|Ga0209471_1033065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2513	Open in IMG/M
3300026318\|Ga0209471_1040749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2207	Open in IMG/M
3300026331\|Ga0209267_1085673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1356	Open in IMG/M
3300026333\|Ga0209158_1138953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	897	Open in IMG/M
3300026335\|Ga0209804_1066399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1721	Open in IMG/M
3300027643\|Ga0209076_1074123	Not Available	968	Open in IMG/M
3300027748\|Ga0209689_1030003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3246	Open in IMG/M
3300027873\|Ga0209814_10251426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	766	Open in IMG/M
3300027873\|Ga0209814_10439008	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300027909\|Ga0209382_10321522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1740	Open in IMG/M
3300028536\|Ga0137415_10028400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	5511	Open in IMG/M
3300028536\|Ga0137415_10148847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2178	Open in IMG/M
3300030336\|Ga0247826_11149838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	621	Open in IMG/M
3300031548\|Ga0307408_100568647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1003	Open in IMG/M
3300031720\|Ga0307469_10017439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3788	Open in IMG/M
3300031820\|Ga0307473_10159158	Not Available	1295	Open in IMG/M
3300032180\|Ga0307471_101592705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300033550\|Ga0247829_10855774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.19%
Host-Associated	Host-Associated	16.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Plants	Host-Associated → Plants	16.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1018893372	3300000956	Soil	MTTVAQRVLLAGFVLLVATGSTDVTLVRADAQRTFLGACYCRAGETLGCTNDLSESECRRRCDEALCDDWFWKERLPCWNWGYGG*
soilH2_101956542	3300003324	Sugarcane Root And Bulk Soil	MMAVARGLVFGALLTIAAGTGSETIARSEPSRPFVGACYCRMGETLKCTSDLTEPDCRRRCDEALCDDWFWRERLPCWNWGYGG*
Ga0062594_1016112672	3300005093	Soil	MTPIPRLAAAALLSIASLTDGAVVTRADTVTALLGACYCRVGQTLQCTSNLSEPDCRQRCNDALCDDWFWKERLPCWNWGYGG*
Ga0066672_101904232	3300005167	Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066677_102891782	3300005171	Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0066673_100570152	3300005175	Soil	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0066679_100578251	3300005176	Soil	IAMVGSGGTAVARADAPGTFLGACYCRAGEALRCTNDLSERDCRRHCDEALCDDWFWKERLPCWNWGYGG*
Ga0066679_109277162	3300005176	Soil	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066690_100616673	3300005177	Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGEALRCTNDLSEGECRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066688_100820973	3300005178	Soil	MTTIAQRAGLGVLLIAAVGSGSTAIARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066688_101807592	3300005178	Soil	MTAIARRAGLSLLLIAAIASSGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066685_102618602	3300005180	Soil	MTAIARRAGLSLLLIAAVASGGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066685_109637912	3300005180	Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDVSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0066388_1022905912	3300005332	Tropical Forest Soil	MRTTTRWAALGLLLLVAAAAAVADTRPSFLGACYCRVAGTLRCTGDLSESDCRRQCDEALCDEWFW
Ga0066388_1076667621	3300005332	Tropical Forest Soil	RRVVLAGLLVLVAAGSSDISLVRADAQRIFLGACYCRAGETLACTNDLSESECRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0070708_1000722494	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLGVLLIAAVGSGAAVGGADAPTTFLGACYCRAGETLRCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0070708_1004846692	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066686_110324362	3300005446	Soil	MTAIARRAGLSLLLIASIASGGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066689_105104031	3300005447	Soil	MTTIAQRAGLGVLLIAAVGSGSTATARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWG
Ga0066689_109733261	3300005447	Soil	MTTMARRALLALLLLVAAGTGGITVARAAPPRVLLGACYCRAAGTLHCTSNLSEADCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066682_103425072	3300005450	Soil	MTTIAQRAGLGVLLIAAVGSGSTAIARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0066681_102571372	3300005451	Soil	MLTIARRAGLGLLLIAVAASGGTAVARSDAPRPWLGACYCRAGETLRCTSDLTERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0070707_1010797282	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRSGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0070699_1001226183	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLGVLLIAAVGSGGAAVGRADAPTTFLGACYCRAGETLRCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0070699_1001279393	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEADCRRHCDEALCDDWFWRERLPCWNWGYGG*
Ga0070697_1002733332	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLGVLLIAAVGSGGAAVARADAPGTFLGACYCRAGETLRCTSDLSERDCRRHCDEALCDDWFWKERLPCWNWGYGG*
Ga0070704_1002763491	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LAAAGTGGITLARAAAPQVLLGACYCRAAGTLHCTSNLREAECRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066700_111573382	3300005559	Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFW
Ga0066703_100827465	3300005568	Soil	AAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066651_106392222	3300006031	Soil	MTTIAQRAGLGVLLIAAVGSGSTATARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0075417_100300942	3300006049	Populus Rhizosphere	MMTTTRGAALSLLLLVAVGAAVADAPATFLGACYCRAAGTLRCTSDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0075417_101674522	3300006049	Populus Rhizosphere	MRTTTRRAVLGVLLLVALAAGGAAAEGPTVFLGACYCREAGTLRCTGDLSEPDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0075432_105378022	3300006058	Populus Rhizosphere	MMTTTRGAALGLLLLVAVGAAVADAPATFLGACYCRAAGTLRCTGDLSEPDCQRHCDEALCDEWFWKERLPCWNWGY
Ga0070716_1006467212	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTIARRALLAVLLLVAAGTGGITPAGAAAPRVFLGACYCRAAGALHCTSDLSEAECGRRCNEALCDDWFWKERL
Ga0070716_1016463401	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLGVLLIAAVGSGGAAVARADAPGTFLGACYCRAGETLRCTSDLSERDCRRHCDEALCDDWFWKERLPCWNW
Ga0066665_100162042	3300006796	Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDDWFWKERLPCWNWGYGG*
Ga0075421_1012171542	3300006845	Populus Rhizosphere	MMTTTRGAALGLLLLVAVGAAVADAPATFLGACYCRAAGTLRCTSDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0075433_101481573	3300006852	Populus Rhizosphere	MTVLARHAGLVLLLIAAAASGGAALARAETPRTFLGACYCRAGETLKCTSNLTEADCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0075433_102693212	3300006852	Populus Rhizosphere	MMTTTRGAALILLLLVAAGAAVADAPATFLGACYCRAAGTLRCTSDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0075434_1025172752	3300006871	Populus Rhizosphere	RGLAMTTIARRAGLALLLIAAAGSSGATVARGDARRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0075429_1007264582	3300006880	Populus Rhizosphere	MMTTTRGAALSLLLLVAAGAAVADAPAIFLGACYCRAAGTLRCTSDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0075424_10000089328	3300006904	Populus Rhizosphere	LLIAAAASGGAALARAETPRTFLGACYCRAGETLKCTSNLTEADCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0075424_1010627972	3300006904	Populus Rhizosphere	VTTTRGAALSLLLLVAAGAAVADAPATFLGACYCRAAGTLRCTSDLSEPDCQRHCNEALCDEWFWKERLPCWNWGYGG*
Ga0099791_105098991	3300007255	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0099794_100051396	3300007265	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWSWGYGG*
Ga0066710_1001976472	3300009012	Grasslands Soil	MTAIARRAGLSLLLVAAIASGGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0099829_105568082	3300009038	Vadose Zone Soil	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWRERLPCWNWGYGG*
Ga0099828_102611262	3300009089	Vadose Zone Soil	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLGEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0099827_107911692	3300009090	Vadose Zone Soil	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLNEADCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0111539_111236262	3300009094	Populus Rhizosphere	AVLGVLLLVALAAGGAAAEGPTVFLGACYCREAGTLRCTGDLSEPDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0111539_111249532	3300009094	Populus Rhizosphere	MSTTTRRAALGLLLFAAAAGGAAADAPTVFLGACYCREAGTLRCTGDLSETDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0075418_124196022	3300009100	Populus Rhizosphere	MSTTTRRAALGLLLFAAAAGGAAADAPTVFLGACYCREAGTLRCTGDLSETDCRRRCDEALCD
Ga0066709_1000440143	3300009137	Grasslands Soil	MTAIARRAGLSLLLVAAIASGGAVIARAQTPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066709_1020676192	3300009137	Grasslands Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGETLGCTNDLSERDCRRHCDEALCDDWFWKERLPCLNWGYGG*
Ga0114129_102076502	3300009147	Populus Rhizosphere	MMTTTRGAALSLLLLVAVGAAVADAPATFLGACYCRAAGTLRCTGDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137392_108384942	3300011269	Vadose Zone Soil	MTTIARRAGLGVLLIAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDDALGDDWFWKERLPCWNWGYGG*
Ga0137388_104344012	3300012189	Vadose Zone Soil	MTTIARRAGLAFLLIAAAGSSGAAVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0137399_102337892	3300012203	Vadose Zone Soil	MTTIARRAGLGVLLIAALGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDDWFWKERLPCWNWGYGG*
Ga0137399_104013131	3300012203	Vadose Zone Soil	MTTIARWAGLGLLLMAAAGSGGAAVARAESPRTFLGACYCRAGETLSCTNDVSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137399_104221302	3300012203	Vadose Zone Soil	GHDAQVGWAQRHAEEYMTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137362_100858903	3300012205	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDDALCDDWFWKERLPCWNWGYGG*
Ga0137376_115415772	3300012208	Vadose Zone Soil	QRAGLGVLLIAAVGSGGAAVARAEASRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137360_109557452	3300012361	Vadose Zone Soil	EGGHGLAMTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0137360_111829812	3300012361	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKE
Ga0137390_107636612	3300012363	Vadose Zone Soil	MTTIARRAGLAFLLIAAAGSSGAAVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWK
Ga0137358_100779112	3300012582	Vadose Zone Soil	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLGCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137397_100203156	3300012685	Vadose Zone Soil	MLTIARRAGLGLLLIAATVSGGAAVARDDAPRTWLGACYCRAGETLSCTSDLTELDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0137397_101018502	3300012685	Vadose Zone Soil	MTTIARRALMALLLLVAAGTGGITVARAAAPRAFLGSCYCRAAGTLHCTSNLSEADCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0137397_102694212	3300012685	Vadose Zone Soil	AQRHAEEYMTTIARRAGLGVLLIAAFGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137396_100635262	3300012918	Vadose Zone Soil	MTTIARWAGLGLLLIAAAGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDVSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137396_101124822	3300012918	Vadose Zone Soil	MTTIARRAGLGVLLIAALGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0137394_103465622	3300012922	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137394_106604332	3300012922	Vadose Zone Soil	MTTIARRAGLGALLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137419_102870742	3300012925	Vadose Zone Soil	MTTIARWAGLGLLLMAAAGSGGAAVARAESPRTFLGACYCRAGETLSCTNDVSERDCRRRCDEALCDEWF
Ga0137419_106472992	3300012925	Vadose Zone Soil	TIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137407_116538721	3300012930	Vadose Zone Soil	MMTIARRAGLGLLLLVVAGSGGAAVARGDAPRTWLGACYCRAGETLRCTSDLTELDCRRRCDEALCDDWFWKERLPCWNWGY
Ga0137407_119012132	3300012930	Vadose Zone Soil	MTAIARRAGLSLLLIAAVASGGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKE
Ga0137410_104037471	3300012944	Vadose Zone Soil	EYMTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0137420_12264211	3300015054	Vadose Zone Soil	RHAEEYMTTIARRAGLGVLLIAAVGSGGAAVARADAPGTFLGACYCRAGETLGCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137420_14279622	3300015054	Vadose Zone Soil	QRRQRGHDAQVGWAQRHAEEYMTTIARRAGLGVLLIAAVGSGGAAVARADAPGTFLGACYCRAGETLGCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137420_14279631	3300015054	Vadose Zone Soil	MTTIARRAGLGVLLIAAVGSGGAAVARADAPGTFLGACYCRAGETLGCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG*
Ga0137418_1000339112	3300015241	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVARADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0134072_100622781	3300015357	Grasslands Soil	MTTIAQRAGLGVLLIAAVGSGSTATARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG*
Ga0132258_107113262	3300015371	Arabidopsis Rhizosphere	MTTVARRVVLAGLLLFVATGSTDVTLVRADARWTFLGACYCRAGETLGCTNDLSESECRRRCDEALCDDWFWKERLPCWNWGYGG*
Ga0066667_120095421	3300018433	Grasslands Soil	MTAIARRAGLSLLLIAAIASGGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0066669_101241872	3300018482	Grasslands Soil	MTTIAQRAGLGVLLIAAVGSGSTATARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0066669_109670502	3300018482	Grasslands Soil	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0179594_100557453	3300020170	Vadose Zone Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0179592_101040722	3300020199	Vadose Zone Soil	MTTIARRAGLGALLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0209341_104741832	3300025325	Soil	MTTVARRATLGLLLIAAAGSGGAGTARAEAPLLGACYCRAAMTLECTSDLTEQECRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0207684_106667612	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEPDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0207646_100346846	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGETLTCTSDLSEADCRRHCDEALCDDWFWRERLPCWNWGYGG
Ga0207665_102422372	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTIARRALLAVLLLVAAGTGGITPAGAAAPRVFLGACYCRAAGALHCTSDLSEAECGRRCNEALCDDWFWKERLPCWNWGYGG
Ga0209234_10182132	3300026295	Grasslands Soil	MTAIARRAGLSLLLIAAIASSGAVIARAQAPRTFLGACYCRAGETLKCTSNLTEPDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209234_10789812	3300026295	Grasslands Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGEALRCTNDLSEGECRRHCDEALCDDWFWKERLPCWNWGYGG
Ga0209471_10330652	3300026318	Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209471_10407493	3300026318	Soil	MTTIAQRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0209267_10856732	3300026331	Soil	MTTIAQRAGLGVLLIAAVGSGSTAIARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209158_11389533	3300026333	Soil	HAEEYMTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGEALRCTNDLSEGECRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209804_10663993	3300026335	Soil	MTTIARRAGLGVLLIAMVGSGGTAVARADAPGTFLGACYCRAGEALRCTNDLSEGECRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209076_10741232	3300027643	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVAGADAPGTFLGACYCRAGETLGCTNDLSERDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0209689_10300031	3300027748	Soil	MTTIARRAGLGVLLIAAVGSGGAAVARAEAPRTFLGACYCRAGETLSCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209814_102514262	3300027873	Populus Rhizosphere	MRTTTRRAVLGVLLLVALAAGGAAAEGPTVFLGACYCREAGTLRCTGDLSEPDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0209814_104390082	3300027873	Populus Rhizosphere	MTVLARHAGLVLLLIAAAASGGAALARAETPRTFLGACYCRAGETLKCTSNLTEADCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0209382_103215222	3300027909	Populus Rhizosphere	MMTTTRGAALGLLLLVAVGAAVADAPATFLGACYCRAAGTLRCTSDLSEPDCQRHCDEALCDEWFWKERLPCWNWGYGG
Ga0137415_100284007	3300028536	Vadose Zone Soil	MTTIARRAGLGVLLIAAFGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDEWFWKERLPCWNWGYGG
Ga0137415_101488472	3300028536	Vadose Zone Soil	MTTIARRAGLGVLLIAALGSGGAAVARADAPGTFLGACYCRAGETLRCTNDLSERDCRRHCDEALCDDWFWKERLPCWNWGYGG
Ga0247826_111498383	3300030336	Soil	LLLFAAAAGGAAADAPTVFLGACYCREAGTLRCTGDLSETDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0307408_1005686472	3300031548	Rhizosphere	MTTSARRALLGVLLITAAGAGGVTTVRADSPRPLLGACYCRAAGALQCTGGLSEPDCRRRCDEALCDEWFWKERLPCWNWGYGG
Ga0307469_100174394	3300031720	Hardwood Forest Soil	LLLVAAGTGGITPAGAAAPRVFLGACYCRAAGALHCTSDLSEAECGRRCNEALCDDWFWKERLPCWNWGYGG
Ga0307473_101591582	3300031820	Hardwood Forest Soil	MTTIARRAGLALLLIAAAGSSGATVARGDAPRTFLGACYCRAGEILTCTSDLSEPDCRRRCDEALCDDWFWRERLPCWNWGYGG
Ga0307471_1015927052	3300032180	Hardwood Forest Soil	MTTIARRAGLGVLLIAAVGSGGAAVGRADAPTTFLGACYCRAGETLRCTNDLSERDCRRRCDEALCDDWFWKERLPCWNWGYGG
Ga0247829_108557742	3300033550	Soil	MTPIPRLAAAALLSIASLTDGAVVTRADTVTALLGACYCRVGQTLQCTSNLSEPDCRQRCNDALCDDWFWKERLPCWNWGYGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083145

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences