NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083251

Metagenome Family F083251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083251
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 45 residues
Representative Sequence MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Number of Associated Samples 78
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.96 %
% of genes near scaffold ends (potentially truncated) 51.33 %
% of genes from short scaffolds (< 2000 bps) 87.61 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.142 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(41.593 % of family members)
Environment Ontology (ENVO) Unclassified
(92.035 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.150 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 71.74%    β-sheet: 0.00%    Coil/Unstructured: 28.26%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00118Cpn60_TCP1 4.42
PF00166Cpn10 1.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 4.42
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.77


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.14 %
All OrganismsrootAll Organisms31.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10019707Not Available3235Open in IMG/M
3300000117|DelMOWin2010_c10076009All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1330Open in IMG/M
3300001450|JGI24006J15134_10040561Not Available1972Open in IMG/M
3300001450|JGI24006J15134_10249567Not Available510Open in IMG/M
3300001472|JGI24004J15324_10062822Not Available1060Open in IMG/M
3300001589|JGI24005J15628_10176067Not Available622Open in IMG/M
3300002231|KVRMV2_100415734All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157771Open in IMG/M
3300005057|Ga0068511_1062779Not Available626Open in IMG/M
3300006029|Ga0075466_1179026Not Available533Open in IMG/M
3300006164|Ga0075441_10215971Not Available712Open in IMG/M
3300006735|Ga0098038_1074076Not Available1201Open in IMG/M
3300006735|Ga0098038_1103768Not Available978Open in IMG/M
3300006735|Ga0098038_1105717All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157967Open in IMG/M
3300006735|Ga0098038_1156308Not Available757Open in IMG/M
3300006735|Ga0098038_1169966All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon718Open in IMG/M
3300006735|Ga0098038_1275806All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon526Open in IMG/M
3300006737|Ga0098037_1148086Not Available789Open in IMG/M
3300006737|Ga0098037_1170103All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon724Open in IMG/M
3300006737|Ga0098037_1190088Not Available675Open in IMG/M
3300006737|Ga0098037_1233013Not Available594Open in IMG/M
3300006737|Ga0098037_1269993Not Available542Open in IMG/M
3300006738|Ga0098035_1219897Not Available630Open in IMG/M
3300006749|Ga0098042_1150655Not Available570Open in IMG/M
3300006793|Ga0098055_1188376All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae786Open in IMG/M
3300006793|Ga0098055_1248639All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon669Open in IMG/M
3300006793|Ga0098055_1267482All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157641Open in IMG/M
3300006793|Ga0098055_1358033Not Available542Open in IMG/M
3300006916|Ga0070750_10157294Not Available1025Open in IMG/M
3300006919|Ga0070746_10319724Not Available709Open in IMG/M
3300006919|Ga0070746_10368676Not Available648Open in IMG/M
3300006920|Ga0070748_1154010Not Available854Open in IMG/M
3300006920|Ga0070748_1154986Not Available851Open in IMG/M
3300006921|Ga0098060_1052314All Organisms → Viruses → Predicted Viral1206Open in IMG/M
3300006921|Ga0098060_1141749Not Available669Open in IMG/M
3300006921|Ga0098060_1152778Not Available639Open in IMG/M
3300006921|Ga0098060_1160135Not Available622Open in IMG/M
3300006921|Ga0098060_1216998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermoanaerobacter → Thermoanaerobacter indiensis520Open in IMG/M
3300006928|Ga0098041_1152376Not Available743Open in IMG/M
3300006928|Ga0098041_1190407Not Available657Open in IMG/M
3300006929|Ga0098036_1139276All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157742Open in IMG/M
3300006947|Ga0075444_10400394Not Available516Open in IMG/M
3300007276|Ga0070747_1128385Not Available921Open in IMG/M
3300007276|Ga0070747_1292589Not Available561Open in IMG/M
3300007540|Ga0099847_1019221All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon2231Open in IMG/M
3300007963|Ga0110931_1138527Not Available731Open in IMG/M
3300008220|Ga0114910_1092238All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157910Open in IMG/M
3300008999|Ga0102816_1166232All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157685Open in IMG/M
3300009000|Ga0102960_1186363Not Available742Open in IMG/M
3300009071|Ga0115566_10252056All Organisms → Viruses → Predicted Viral1057Open in IMG/M
3300009412|Ga0114903_1021049All Organisms → Viruses → Predicted Viral1685Open in IMG/M
3300009496|Ga0115570_10494324Not Available510Open in IMG/M
3300009602|Ga0114900_1015710Not Available2897Open in IMG/M
3300009790|Ga0115012_11036572All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157680Open in IMG/M
3300010148|Ga0098043_1026097Not Available1853Open in IMG/M
3300011013|Ga0114934_10227313Not Available857Open in IMG/M
3300012919|Ga0160422_10328199All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157945Open in IMG/M
3300012928|Ga0163110_11101019Not Available636Open in IMG/M
3300012936|Ga0163109_11447228All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157500Open in IMG/M
3300017725|Ga0181398_1149787Not Available553Open in IMG/M
3300017728|Ga0181419_1044554All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571172Open in IMG/M
3300017731|Ga0181416_1020467All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300017731|Ga0181416_1024399Not Available1420Open in IMG/M
3300017732|Ga0181415_1035072All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571152Open in IMG/M
3300017732|Ga0181415_1107065Not Available630Open in IMG/M
3300017733|Ga0181426_1086417Not Available628Open in IMG/M
3300017738|Ga0181428_1137216Not Available572Open in IMG/M
3300017741|Ga0181421_1159656Not Available583Open in IMG/M
3300017743|Ga0181402_1162940Not Available561Open in IMG/M
3300017744|Ga0181397_1097832Not Available773Open in IMG/M
3300017748|Ga0181393_1029551Not Available1560Open in IMG/M
3300017748|Ga0181393_1059433All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1030Open in IMG/M
3300017750|Ga0181405_1007336Not Available3214Open in IMG/M
3300017751|Ga0187219_1194025All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon564Open in IMG/M
3300017755|Ga0181411_1023710All Organisms → Viruses → Predicted Viral1980Open in IMG/M
3300017760|Ga0181408_1116571All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon692Open in IMG/M
3300017762|Ga0181422_1142304Not Available738Open in IMG/M
3300017765|Ga0181413_1205126Not Available588Open in IMG/M
3300017768|Ga0187220_1017992Not Available2127Open in IMG/M
3300017768|Ga0187220_1028234Not Available1690Open in IMG/M
3300017771|Ga0181425_1276811Not Available516Open in IMG/M
3300017781|Ga0181423_1055717Not Available1575Open in IMG/M
3300020165|Ga0206125_10008399Not Available7817Open in IMG/M
3300020165|Ga0206125_10157478Not Available909Open in IMG/M
3300020417|Ga0211528_10385941Not Available515Open in IMG/M
3300021347|Ga0213862_10020611All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon2464Open in IMG/M
3300021960|Ga0222715_10264312Not Available994Open in IMG/M
3300022061|Ga0212023_1042679Not Available631Open in IMG/M
(restricted) 3300022902|Ga0233429_1274576Not Available562Open in IMG/M
3300025086|Ga0208157_1090566Not Available749Open in IMG/M
3300025086|Ga0208157_1134139Not Available561Open in IMG/M
3300025099|Ga0208669_1003027Not Available5602Open in IMG/M
3300025099|Ga0208669_1003955Not Available4760Open in IMG/M
3300025099|Ga0208669_1036883All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571167Open in IMG/M
3300025110|Ga0208158_1113955Not Available630Open in IMG/M
3300025110|Ga0208158_1123023All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon601Open in IMG/M
3300025128|Ga0208919_1073196All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300025128|Ga0208919_1240831Not Available528Open in IMG/M
3300025151|Ga0209645_1064950All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571245Open in IMG/M
3300025168|Ga0209337_1028677Not Available3121Open in IMG/M
3300025168|Ga0209337_1136829All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300025168|Ga0209337_1191523Not Available841Open in IMG/M
3300025264|Ga0208029_1012872Not Available2262Open in IMG/M
3300025277|Ga0208180_1011634Not Available2876Open in IMG/M
3300025301|Ga0208450_1022653All Organisms → Viruses → Predicted Viral1786Open in IMG/M
3300025769|Ga0208767_1111419Not Available1071Open in IMG/M
3300027906|Ga0209404_10333346All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157975Open in IMG/M
3300027906|Ga0209404_10915809All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157599Open in IMG/M
3300031629|Ga0307985_10412034Not Available521Open in IMG/M
3300031658|Ga0307984_1114886Not Available772Open in IMG/M
3300031658|Ga0307984_1147266Not Available659Open in IMG/M
3300031766|Ga0315322_10040721Not Available3438Open in IMG/M
3300032047|Ga0315330_10007713Not Available7313Open in IMG/M
3300032073|Ga0315315_10183478Not Available1953Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine41.59%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater20.35%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous9.73%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.31%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.65%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.65%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.65%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.77%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.77%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.77%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.77%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.89%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.89%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.89%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.89%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.89%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.89%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.89%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022902 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_135_MGEnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1001970783300000115MarineMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
DelMOWin2010_1007600923300000117MarineMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
JGI24006J15134_1004056163300001450MarineMDNISMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK*
JGI24006J15134_1024956713300001450MarineMKDLNKINTIKFYTYKNILYILINLKLLTHNKKNQIL
JGI24004J15324_1006282223300001472MarineMNELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
JGI24005J15628_1017606723300001589MarineMDNINMKDLNKINTIKFYTYKNILYILINLKLLTHNKKNQILSKYYDNLNK*
KVRMV2_10041573453300002231Marine SedimentSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0068511_106277913300005057Marine WaterMKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0075466_117902613300006029AqueousMKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0075441_1021597143300006164MarineMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK*
Ga0098038_107407633300006735MarineVLDNINMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098038_110376823300006735MarineVLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098038_110571753300006735MarineMKELNKINTIKFYTYKKLLYILINLKLLTPNQKNSILSKYYDNLTNN*
Ga0098038_115630813300006735MarineMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098038_116996623300006735MarineLDNISMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098038_127580623300006735MarineMKNLNKLNSIKFYTYKKLLYILINLKLLTYNQKNS
Ga0098037_114808623300006737MarineMLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098037_117010313300006737MarineMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098037_119008833300006737MarineVLDNINMKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0098037_123301323300006737MarineVLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQK
Ga0098037_126999313300006737MarineLDNINMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098035_121989723300006738MarineLDNNNMKDLNKTNTIKFYTYKKLLYILINLKLLTSNQKNNILSLYYDNLTK*
Ga0098042_115065513300006749MarineKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098055_118837613300006793MarineMKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDKLNK*
Ga0098055_124863913300006793MarineMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0098055_126748233300006793MarineLNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0098055_135803313300006793MarineMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLNK*
Ga0070750_1015729443300006916AqueousMKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*N*
Ga0070746_1031972413300006919AqueousNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0070746_1036867623300006919AqueousMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*N*
Ga0070748_115401013300006920AqueousNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0070748_115498613300006920AqueousNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0098060_105231413300006921MarineTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098060_114174923300006921MarineMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSIL
Ga0098060_115277813300006921MarineIVLDNINMKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDKLNK*
Ga0098060_116013513300006921MarineKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098060_121699813300006921MarineDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098041_115237613300006928MarineIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0098041_119040713300006928MarineTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0098036_113927633300006929MarineMNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0075444_1040039413300006947MarineMKELNKLNTIKFYTYKKLLYILIKLNLLTYNNKNQILSKYYDELNK*
Ga0070747_112838513300007276AqueousKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0070747_129258913300007276AqueousIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0099847_101922143300007540AqueousMKELNTKNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0110931_113852713300007963MarineNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0114910_109223833300008220Deep OceanNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK*
Ga0102816_116623243300008999EstuarineKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0102960_118636313300009000Pond WaterFAKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0115566_1025205613300009071Pelagic MarineNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0114903_102104923300009412Deep OceanMKDLNKINTIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTNN*
Ga0115570_1049432423300009496Pelagic MarineMKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSI
Ga0114900_101571013300009602Deep OceanMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTN*
Ga0115012_1103657233300009790MarineLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLTK*
Ga0098043_102609753300010148MarineMKDLNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0114934_1022731323300011013Deep SubsurfaceMKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLIK*
Ga0160422_1032819913300012919SeawaterMSMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0163110_1110101933300012928Surface SeawaterVLDNINMKQLNKINTIKFYTYKKLLYILINLKLLTYNQK
Ga0163109_1144722823300012936Surface SeawaterMKDLDKINKIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTK*
Ga0181398_114978713300017725SeawaterTNVIQIVLDNISMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0181419_104455413300017728SeawaterNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0181416_102046753300017731SeawaterMKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK
Ga0181416_102439913300017731SeawaterMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNL
Ga0181415_103507243300017732SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLKK
Ga0181415_110706533300017732SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK
Ga0181426_108641713300017733SeawaterMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN
Ga0181428_113721613300017738SeawaterMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSI
Ga0181421_115965613300017741SeawaterMKELNTKNKIKFYTYKQLLYILINLKLLTYNQKNS
Ga0181402_116294013300017743SeawaterNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLNK
Ga0181397_109783213300017744SeawaterKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0181393_102955143300017748SeawaterMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYY
Ga0181393_105943323300017748SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN
Ga0181405_100733633300017750SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDN
Ga0187219_119402523300017751SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNS
Ga0181411_102371063300017755SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSIL
Ga0181408_111657113300017760SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLN
Ga0181422_114230413300017762SeawaterNTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0181413_120512613300017765SeawaterSMKELNKTNKIKFYTYKKILYILINLKLLTYNQKNLILSKYYDNLTK
Ga0187220_101799263300017768SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSK
Ga0187220_102823453300017768SeawaterNINMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0181425_127681123300017771SeawaterMKELNKINKIKFYTYKKLLYILINLKLLTYNQRNSILSKY
Ga0181423_105571713300017781SeawaterMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILAKYYDNLTK
Ga0206125_10008399153300020165SeawaterMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0206125_1015747813300020165SeawaterKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0211528_1038594113300020417MarineKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLINKQ
Ga0213862_1002061153300021347SeawaterMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0222715_1026431213300021960Estuarine WaterNMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0212023_104267913300022061AqueousSMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
(restricted) Ga0233429_127457613300022902SeawaterMDNISMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK
Ga0208157_109056613300025086MarineMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0208157_113413913300025086MarineMLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0208669_100302773300025099MarineMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0208669_100395513300025099MarineMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILS
Ga0208669_103688313300025099MarineDNINMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0208158_111395513300025110MarineKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN
Ga0208158_112302323300025110MarineMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYY
Ga0208919_107319653300025128MarineMNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN
Ga0208919_124083113300025128MarineMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNLILSKYYDNLTK
Ga0209645_106495053300025151MarineMKDLNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0209337_102867723300025168MarineMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLTK
Ga0209337_113682913300025168MarineMDNINMKDLNKINTIKFYTYKQLLYILINLKLLTHNKKNQILSKYYDNLNK
Ga0209337_119152313300025168MarineMDNINMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK
Ga0208029_101287213300025264Deep OceanMKDLNKINTIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTNN
Ga0208180_101163493300025277Deep OceanMKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK
Ga0208450_102265313300025301Deep OceanMNELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK
Ga0208767_111141943300025769AqueousMKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN
Ga0209404_1033334633300027906MarineMNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK
Ga0209404_1091580913300027906MarineIRTKLDNINMKDLNKINTIKFYTYKQLLYILIKLNIITYNQKNSILSKYYDNLTNN
Ga0307985_1041203423300031629MarineMDNISMKKLNKLNTIKFYTYKKLLYILINLKLLTYNNKNQILSKYYDKLNK
Ga0307984_111488613300031658MarineMKELNKLNTIKFHTYKKLLYILIHLQLLTYNNKNKILSKYYDKLN
Ga0307984_114726613300031658MarineISMKELNKINTIKFYTYKKLLYILINLNLLTYNNKNQILSKYYDKLNK
Ga0315322_1004072183300031766SeawaterMKDLNKINKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN
Ga0315330_1000771333300032047SeawaterMKELNKINTIKFYTYKQLLYILIKLNIITYNQKNSILSKYYDNLTNN
Ga0315315_1018347813300032073SeawaterMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDN


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