NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083293

Metagenome Family F083293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083293
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 55 residues
Representative Sequence GAAQTPLARVLASTEVTEATKQRLRQEKARLNPFALKQAVTQSLKAISAMRRHRN
Number of Associated Samples 105
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.67 %
% of genes near scaffold ends (potentially truncated) 90.27 %
% of genes from short scaffolds (< 2000 bps) 94.69 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (55.752 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(11.504 % of family members)
Environment Ontology (ENVO) Unclassified
(31.858 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(30.973 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.60%    β-sheet: 0.00%    Coil/Unstructured: 49.40%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF06877RraB 0.88
PF07152YaeQ 0.88
PF01609DDE_Tnp_1 0.88
PF01903CbiX 0.88
PF02371Transposase_20 0.88
PF13633Obsolete Pfam Family 0.88
PF03461TRCF 0.88
PF02775TPP_enzyme_C 0.88
PF03629SASA 0.88
PF01887SAM_HAT_N 0.88
PF13335Mg_chelatase_C 0.88
PF03781FGE-sulfatase 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG1197Transcription-repair coupling factor (superfamily II helicase)Transcription [K] 1.77
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.88
COG1912Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)Defense mechanisms [V] 0.88
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.88
COG3076Regulator of RNase E activity RraBTranslation, ribosomal structure and biogenesis [J] 0.88
COG3293TransposaseMobilome: prophages, transposons [X] 0.88
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.88
COG3547TransposaseMobilome: prophages, transposons [X] 0.88
COG4681Uncharacterized conserved protein YaeQ, suppresses RfaH defectFunction unknown [S] 0.88
COG5421TransposaseMobilome: prophages, transposons [X] 0.88
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.88
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.75 %
All OrganismsrootAll Organisms44.25 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004079|Ga0055514_10207948All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063561Open in IMG/M
3300004080|Ga0062385_11288432Not Available503Open in IMG/M
3300004774|Ga0007794_10183405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063624Open in IMG/M
3300005171|Ga0066677_10385147All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300005177|Ga0066690_10785864All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C620Open in IMG/M
3300005336|Ga0070680_101878050Not Available519Open in IMG/M
3300005343|Ga0070687_100708181All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C704Open in IMG/M
3300005459|Ga0068867_102051061All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria541Open in IMG/M
3300005555|Ga0066692_10694118All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005568|Ga0066703_10785477Not Available545Open in IMG/M
3300005616|Ga0068852_102404332Not Available547Open in IMG/M
3300005764|Ga0066903_107520019All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C562Open in IMG/M
3300005826|Ga0074477_1498744All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300006163|Ga0070715_10887502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C548Open in IMG/M
3300006196|Ga0075422_10315938All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C673Open in IMG/M
3300006797|Ga0066659_11719923All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063529Open in IMG/M
3300006864|Ga0066797_1244611All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006903|Ga0075426_11406490Not Available530Open in IMG/M
3300006914|Ga0075436_101055393All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium611Open in IMG/M
3300007255|Ga0099791_10626136Not Available527Open in IMG/M
3300009091|Ga0102851_13416294All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063510Open in IMG/M
3300009111|Ga0115026_10357512All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin0631044Open in IMG/M
3300009111|Ga0115026_11590441All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063547Open in IMG/M
3300009131|Ga0115027_11723344Not Available522Open in IMG/M
3300009645|Ga0116106_1297812Not Available513Open in IMG/M
3300009651|Ga0105859_1266808Not Available526Open in IMG/M
3300009665|Ga0116135_1359640Not Available584Open in IMG/M
3300009762|Ga0116130_1036828Not Available1575Open in IMG/M
3300009839|Ga0116223_10199114All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300010043|Ga0126380_11655443Not Available573Open in IMG/M
3300010323|Ga0134086_10361857Not Available576Open in IMG/M
3300010325|Ga0134064_10269577Not Available637Open in IMG/M
3300010341|Ga0074045_10623482Not Available687Open in IMG/M
3300010343|Ga0074044_11004452Not Available547Open in IMG/M
3300010361|Ga0126378_12743543Not Available563Open in IMG/M
3300010361|Ga0126378_13321142Not Available511Open in IMG/M
3300010373|Ga0134128_12975495Not Available521Open in IMG/M
3300010400|Ga0134122_11654371Not Available666Open in IMG/M
3300011269|Ga0137392_11478246Not Available538Open in IMG/M
3300011270|Ga0137391_10073900All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2932Open in IMG/M
3300011413|Ga0137333_1156818All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300011436|Ga0137458_1061849Not Available1023Open in IMG/M
3300012143|Ga0137354_1009985All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin0631386Open in IMG/M
3300012205|Ga0137362_10709011Not Available864Open in IMG/M
3300012205|Ga0137362_10828849Not Available792Open in IMG/M
3300012208|Ga0137376_11338370Not Available606Open in IMG/M
3300012361|Ga0137360_11833285All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium512Open in IMG/M
3300012918|Ga0137396_11294297Not Available507Open in IMG/M
3300012923|Ga0137359_11333987Not Available605Open in IMG/M
3300012927|Ga0137416_12185331Not Available509Open in IMG/M
3300012960|Ga0164301_11921225Not Available501Open in IMG/M
3300013088|Ga0163200_1018966All Organisms → cellular organisms → Bacteria2091Open in IMG/M
3300013102|Ga0157371_11321345Not Available558Open in IMG/M
3300013296|Ga0157374_12662566Not Available528Open in IMG/M
3300013306|Ga0163162_11104405Not Available899Open in IMG/M
3300013308|Ga0157375_10813346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1083Open in IMG/M
3300014160|Ga0181517_10634660Not Available533Open in IMG/M
3300014162|Ga0181538_10617434All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300014200|Ga0181526_10905943Not Available555Open in IMG/M
3300014203|Ga0172378_11044468All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum582Open in IMG/M
3300014265|Ga0075314_1174208Not Available512Open in IMG/M
3300014323|Ga0075356_1086126All Organisms → cellular organisms → Bacteria → Proteobacteria736Open in IMG/M
3300014326|Ga0157380_13538667Not Available501Open in IMG/M
3300014502|Ga0182021_13441108Not Available527Open in IMG/M
3300014839|Ga0182027_12218660All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063521Open in IMG/M
3300015241|Ga0137418_10415111All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1095Open in IMG/M
3300015245|Ga0137409_10323110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1351Open in IMG/M
3300015359|Ga0134085_10549461Not Available532Open in IMG/M
3300017659|Ga0134083_10417621Not Available588Open in IMG/M
3300018016|Ga0187880_1353331All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063623Open in IMG/M
3300018018|Ga0187886_1288999All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300018023|Ga0187889_10432063All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063567Open in IMG/M
3300018037|Ga0187883_10448034Not Available663Open in IMG/M
3300018047|Ga0187859_10933060Not Available500Open in IMG/M
3300025548|Ga0208716_1095971All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063590Open in IMG/M
3300025612|Ga0208691_1101196Not Available649Open in IMG/M
3300025918|Ga0207662_11307999Not Available515Open in IMG/M
3300025941|Ga0207711_12095325All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063508Open in IMG/M
3300025961|Ga0207712_11951156Not Available526Open in IMG/M
3300025961|Ga0207712_11969948Not Available523Open in IMG/M
3300026088|Ga0207641_10272161All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin0631589Open in IMG/M
3300026088|Ga0207641_11579700All Organisms → cellular organisms → Bacteria → PVC group658Open in IMG/M
3300026089|Ga0207648_11997496Not Available541Open in IMG/M
3300027829|Ga0209773_10496042Not Available502Open in IMG/M
3300028065|Ga0247685_1052650Not Available508Open in IMG/M
3300028577|Ga0265318_10402200All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063500Open in IMG/M
3300028800|Ga0265338_11223670All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063503Open in IMG/M
3300028806|Ga0302221_10383355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063613Open in IMG/M
3300028808|Ga0302228_10475890All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063551Open in IMG/M
3300029987|Ga0311334_11466180Not Available577Open in IMG/M
3300030225|Ga0302196_10112480All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin0631522Open in IMG/M
3300030738|Ga0265462_12498302Not Available515Open in IMG/M
3300030740|Ga0265460_11346864All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063698Open in IMG/M
3300030943|Ga0311366_11414542Not Available597Open in IMG/M
3300031128|Ga0170823_11000581Not Available549Open in IMG/M
3300031344|Ga0265316_11253457Not Available512Open in IMG/M
3300031446|Ga0170820_17851882All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063762Open in IMG/M
3300031538|Ga0310888_11038288Not Available516Open in IMG/M
3300031708|Ga0310686_117525746All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300031754|Ga0307475_11515339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063514Open in IMG/M
3300031759|Ga0316219_1318197All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium530Open in IMG/M
3300031813|Ga0316217_10409998Not Available504Open in IMG/M
3300032275|Ga0315270_11225367Not Available500Open in IMG/M
3300032805|Ga0335078_12531098All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063529Open in IMG/M
3300032892|Ga0335081_11134380All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium898Open in IMG/M
3300032892|Ga0335081_12144943All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium590Open in IMG/M
3300033414|Ga0316619_12095691Not Available516Open in IMG/M
3300033483|Ga0316629_11165152Not Available614Open in IMG/M
3300033485|Ga0316626_11152609Not Available692Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.50%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.31%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.42%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.54%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland2.65%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.65%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.77%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.77%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.77%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.77%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.77%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.77%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.77%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.77%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.89%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.89%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.89%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.89%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.89%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.89%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004000Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004079Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004774Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5MEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005826Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.186_BBAEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011413Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012143Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT790_2EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014203Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaGEnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014323Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300025521Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030225Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031813Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoAEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055458_1015221423300004000Natural And Restored WetlandsARVLASAQVREATKERLRQHKARLNPFALKRAVTESMQASSALRRS*
Ga0055514_1020794823300004079Natural And Restored WetlandsKVQRIYGAAQTPLARVLGSAQVTVQTKQRLREHKASLNPFALKQAVDQSLKEIAAMRGARP*
Ga0062385_1128843213300004080Bog Forest SoilYGAAQTPVARVLASAEVPQATKERLRQEKAKLNPFALKHAVTRSLKAISAIRRGCN*
Ga0007794_1018340513300004774FreshwaterEHKGGKVQRIYGAAQTPLARVLANAEVSQATKERLLKAKACLNPFALKQAVTQSLKAISALRRLGP*
Ga0066677_1038514713300005171SoilARVLASAEVTEQTKRRLQQEKARLNPFALKQEVDRSLKTIASLRRARL*
Ga0066690_1078586423300005177SoilARVLASAEVKPQTKRRLEQEKARLNPFALKQSVARSLKAIASLRQVRS*
Ga0070680_10187805013300005336Corn RhizosphereSAQTKERLQHEKASLNPFALKRAVDRSLKEIATLRQLRPSN*
Ga0070687_10070818113300005343Switchgrass RhizosphereQTPLARVLVSAEVTAATKERLLKEKARLNPFALKQVVDRSLKAIAAMRRGRH*
Ga0068867_10205106133300005459Miscanthus RhizosphereARVLASAEVTPETKLRLEQEKARLNPFALKREVDRSLKAIAAQRHARR*
Ga0066692_1069411823300005555SoilARVLASAEVKPQTKRRLEQEKARLNPFALKQSVARSLKAIASLRQARS*
Ga0066703_1078547713300005568SoilPLARVLASAQVSAPIKQRLVQEKARLNPFALKQVVGRSLKEIASKRRAR*
Ga0068852_10240433213300005616Corn RhizospherePLARVLASTEVTEQTKRRLQKEKAGLNPFALKMKVAESLKEIDRMRRARPN*
Ga0066903_10752001913300005764Tropical Forest SoilAAQTPLARVLASAEVTPATKARLLKHKASLNPFALKRAVTQSLKRISALRRDRR*
Ga0074477_149874413300005826Sediment (Intertidal)TERASATSCFRIYGAAQTPLARALASAEVSAATKTRLLQHKAGLNPFALKRVVTQSLKAISALRRYRH*
Ga0070715_1088750213300006163Corn, Switchgrass And Miscanthus RhizosphereYGAAQTPLTRVLASAEVNEATKKRLREHKAGLNPFALKQVVTRSLKAISVMRRERN*
Ga0075422_1031593813300006196Populus RhizosphereLKRIYGEAQTPLARVLASAQVSPQTKRRLEQEKARLNPFALKQVVAQSLKEIGSQRQMRP
Ga0066659_1171992323300006797SoilKEGKIRRIYGKAQTPLARVLTSPEVTTQTKRRLEQEKARLNPFALKREVARSLKEIAAMRRAR*
Ga0066797_124461113300006864SoilRRIYGVAQTPLARVVASAEVTQATKARLLQHKASLNPFALKQAVTRSLKAISALCRRRN*
Ga0075426_1140649013300006903Populus RhizosphereQTPLARVLASPEVTPQTKLRLKQEKSQINPFALKRQVDRSLKRIAALRQARP*
Ga0075436_10105539313300006914Populus RhizosphereRIYGAAQTPLARVLASPEVASQTKRRLEKEKSGLNPFALKLQVERSLKQIASQRRALP*
Ga0099791_1062613613300007255Vadose Zone SoilPLARVLASSEVSAQNKERLQKEKARLNPFALKHAVDRSLKEIASLRRART*
Ga0102851_1341629413300009091Freshwater WetlandsTEGRLKRIYGAAQTPLARVLASPEVTPQTKLRLQQQKARLNTFALKREVDRNLKTIAAKRRARP*
Ga0115026_1035751223300009111WetlandLARVLVSPEVTPQTKLRLQQEKARLNPFALKREVDRRLKTIAAKRQARP*
Ga0115026_1159044123300009111WetlandRIYGAAQTPLARVLASTEVTEATKQRLLQEKARLNPFVLKQAVTRSLKAISVMRRHRN*
Ga0115027_1172334413300009131WetlandRLQRLYGAAQTPLARVLASPEVTPQTKLRLEQQKSQLNPFVLKREVDRSLKAIAAKRQARP*
Ga0116106_129781213300009645PeatlandLARVLASAEVSEATKQRLRLEKGGLNPFALKLEVDRGLKAIAEMRQERQ*
Ga0105859_126680823300009651Permafrost SoilRRIYEEAQTPLARVLASAEVSRSTKDRLRQEKGRLNPFALKQEVDRRLKVIAGMRQERR*
Ga0116135_135964013300009665PeatlandTPLARVLASAEVSAATKKRLLQHKADLNPFALKQAVTKSLKAITALRRHRC*
Ga0116130_103682813300009762PeatlandAQTPLARVLASAEVTEATKQRLRRHKARLNPFALKETVERSLKQISAIRRNPN*
Ga0116223_1019911443300009839Peatlands SoilAQTPLARVLASAEVSEATKERLLQDKARLNPFALKQAGTRSLKAISAMRRRRD*
Ga0126380_1165544323300010043Tropical Forest SoilGKVQRIYAAAQTPLARVLASAQVSAATKERLLQDKARLNPFALKQSVTRSMKLISAMRRRRDP*
Ga0134086_1036185713300010323Grasslands SoilGKVWRIYGETQTPLARVLTSAEVTEATKQRLRQHKARLNPFALKQAVARSLKAISAMRREPND*
Ga0134064_1026957713300010325Grasslands SoilKEGRVRRIYAEAQTPLARVLASAEVTPQTKRRLEQEKAGLNPFALKREVARSLNEIASLRQVRP*
Ga0074045_1062348213300010341Bog Forest SoilAQTPLARVLASAEVTQATKQRLREHKARLNPFALKQVVTRSLKAISVMRRDRI*
Ga0074044_1100445223300010343Bog Forest SoilAQTPLARVLASAQVTPQTKRRLEQEKAGLNPFALKREVAHRLKEIASLRRTHS*
Ga0126378_1274354313300010361Tropical Forest SoilVLASAEVSEATKERLRQHKAKLNPFALKRAVTQSLKAIAALRRDHRCPA*
Ga0126378_1332114213300010361Tropical Forest SoilRVRRIYAAAQTPLARVLASAEVTAATKARLLKHKASLNPFALKRAVTQSLKSISALRRDRR*
Ga0134128_1297549523300010373Terrestrial SoilLARVLASAEVKPQTKRRLEQEKARLNPFALKQSVARSLKAIASLRQARS*
Ga0134122_1165437123300010400Terrestrial SoilRDGRIKRIYGKAQTPLARVLSSAEVTPETKQRLEKEKAGLNPFALKQIVDRSLKKIAALRQARP*
Ga0134122_1290309513300010400Terrestrial SoilSAEVSVQTKRRLKQEKALLNPFALKQIVARSLKEIASVRQLRS*
Ga0137392_1147824613300011269Vadose Zone SoilTPLARVLASAEVTEATKQRLREHKARLNPFALKQVVTRSLKAISKMRREPTH*
Ga0137391_1007390013300011270Vadose Zone SoilIYGVAQTPLARVLASTEVTEATKQRQLQHKARLNPFALKQAVTRSLKAITALRRHRN*
Ga0137333_115681823300011413SoilCRIYGKAQTPLARVLASVEVKEETKHRLCTEKGQLNPFALKLEVDRRLKQIAAMRQARS*
Ga0137458_106184913300011436SoilAQTPLARVLASVEVKEETKHRLCTEKGQLNPFALKLEVDRRLKQIAAMGQARR*
Ga0137354_100998513300012143SoilVLASAEVKPQTKRRLEQEKTRLNPFALKQVVTRSLKQIASLRRAH
Ga0137362_1070901123300012205Vadose Zone SoilSAEVTSQTKRRLEREKAGLNPFALKREVARSMKVIASLRQVRH*
Ga0137362_1082884923300012205Vadose Zone SoilGAAQTPLARVLASSEVTVQTKGRLEQEKARLNPFALKQEVARSLKEIAAMRRAC*
Ga0137376_1133837013300012208Vadose Zone SoilRKERTEGRLRRVYGEAQTPLARVLASDEVKPQTKRRLEQEKARLNPFALKQSVARSLRVIASLRQARS*
Ga0137360_1183328513300012361Vadose Zone SoilLRRVYGEAQTPLARVLASAQVSAPIKQRLALEKARLNPFALKRVVGRSLKEIASKRRIT*
Ga0137396_1004047653300012918Vadose Zone SoilASAEVRPQTKQRLEQHKARLNPFALKQLVARGLKEIASLRQARP*
Ga0137396_1129429723300012918Vadose Zone SoilLTSPEVTTQTKRRLEQEKARLNPFALKREVARSLKEIAAMRRAR*
Ga0137359_1133398713300012923Vadose Zone SoilRVLASDDVTRQTKQRLRQEKSRLNPFALKLAVQCSLKEIDAMRRERP*
Ga0137416_1218533123300012927Vadose Zone SoilVEGRLRRVYGQAQTPLARVLASAQVSAPIKQRLVQEKARLNPFALKQVVGRSLKEIASKRRAR*
Ga0164301_1192122523300012960SoilARVLASAQVSAATKARLLQDKARLNPFALKQAVTRSMKLISGVRRYRK*
Ga0163200_101896613300013088FreshwaterVLASAQVTEATKQRLRQEKARLNPFALKRTVDQDLKAIAAMRRACP*
Ga0157371_1132134523300013102Corn RhizosphereQTPLARVLASAEVTEATKERLREHKAKLNPFALKRAITQGMKVISAMRRHST*
Ga0157374_1266256613300013296Miscanthus RhizosphereRLRRVYGEAQTPLARVLASAQVSAPIKQRLVQEKSRLNPFALKQVVGRSLKEIASKRRVR
Ga0163162_1110440523300013306Switchgrass RhizosphereLARVLASAEVTPETKLRLEQEKARLNPFALKREVDRSLKAIAAQRHARR*
Ga0157375_1081334623300013308Miscanthus RhizosphereVASAQVTAQTKQRLRQEKAGLNPFALKQAVDRSLKEIASLRQVRPENR*
Ga0181517_1063466013300014160BogPLARVLASAQVIPATKARLREEKGRLNPFALKREVSLGLKAIAAMRRERR*
Ga0181538_1061743413300014162BogRIYGAAQTPLARVLASAEVSAATKERLQQDKAALNPFALKQAVTKSLKAITALRRPRH*
Ga0181526_1090594313300014200BogTPMARVLASAEVSEATKERLRLEKGRLNPFALKLEVDRGLKAIAEMRQEPG*
Ga0172378_1104446813300014203GroundwaterERESGRIRRKYGKPQTPLARVLASKEVTEETKQRLREHKARLNPFALKMEVARSLKEIEAMRRAPE*
Ga0075314_117420813300014265Natural And Restored WetlandsAQTPLARVLASAEVTPQTKLRLQQEKARLNPFALKREVDRSLRTIAAMRQARP*
Ga0075356_108612623300014323Natural And Restored WetlandsAGKVRRIYGAAQTPLARVLASAEVPEATKKRLLQNKAGLNPFALKRAVTQSMKAITAMRRYRN*
Ga0157380_1353866713300014326Switchgrass RhizosphereVASAQVTAQTKQRLRQEKAGLNPFALKQAVDRSLKEIASLRHVRP*
Ga0182021_1344110813300014502FenKVRRIYKAAQTPLARVLASTEVNQATKERLVKEKARLNPFALKQAVTRSMKAISAMRRHRK*
Ga0182027_1221866013300014839FenLRRIYGAAQTPLARVLACAEVPRATKDRLLKHKAGLNPFALKQAVTRSLKALSGMRRGRR
Ga0137418_1041511123300015241Vadose Zone SoilVLASPEVSAQTKKRLQQEKARLNPFALKEAVDRSMKEIASLRRARL*
Ga0137409_1032311013300015245Vadose Zone SoilRIYGAAQTPLARVLASSEVSAQTKERLQREKARLNPFALKQAVDRSLKEIASLRRARPWKR*
Ga0134085_1054946113300015359Grasslands SoilPLARVLASDDVTRQTKQQLRQEKSGLNPFALKLAVERSLKAIDSMRRERK*
Ga0134083_1041762113300017659Grasslands SoilLASAEVTPQTKRRWEQEKAGLNPFALKSEVARSLKEIASLRQVHP
Ga0187880_135333123300018016PeatlandRRIYGAAQTPLARVLASAEVSAATKERLQQDKAALNPFALKQAVTKSLKAITALRRPRH
Ga0187886_128899913300018018PeatlandTPLARVVASAEVTQATKARLLKHKASLNPFALKQAVTRSLKAISALCRRRN
Ga0187889_1043206323300018023PeatlandRIYGEAQTPLARVLASAQVSPGTKVRLRAEKGRLNPFALKQEVSLGLKAIAALRQERS
Ga0187883_1044803413300018037PeatlandERTERKEGKVRRIYGEAQTPLARVLASAEVSEATKQRLRLEKGGLNPFALKLEVDRGLKAIAEMRQERQ
Ga0187859_1093306013300018047PeatlandPLARVRASGQVNAGTKVRLSAEKKRLNPFALKQEVARGLKAIAGLRQERRR
Ga0210083_105007723300025521Natural And Restored WetlandsMASAQVPPQTKRRLKEEKAGLNPFALKREVVRSLKII
Ga0208716_109597113300025548Arctic Peat SoilVRRIYGAAQTPLARVLASAEVSGATKARLLKHKASLNPFALKQAVTRSLKAISALCRRRN
Ga0208691_110119623300025612PeatlandTPLARVLASAEVSAATKKRLLQHKADLNPFALKQAVTKSLKAITALRRHRC
Ga0207662_1130799913300025918Switchgrass RhizosphereIYGRAQTPLARVLVSAEVTAATKERLLKEKARLNPFALKQVVDRSLKAIAAMRRGRH
Ga0207711_1209532513300025941Switchgrass RhizosphereGKMRRIYGAAQTPLARVLASAEVTEATKERLREHKAKLNPFALKRAITQGMKVISAMRRHST
Ga0207712_1195115613300025961Switchgrass RhizospherePQTPLARVLASAEVRPQTKRRLEQEKARLNPFALKQSVVRSLKAIASLRQARS
Ga0207712_1196994813300025961Switchgrass RhizosphereARVLASAQVTAQTKQRLRQEKAGLNPFALKQAVDRSLKEIASLRQVRP
Ga0207641_1027216123300026088Switchgrass RhizosphereVQRIYAAAQTPLTRVLASKQVSPATKERLLQDKARLNPFALKQAVTRSLKIISGMRRYRN
Ga0207641_1157970013300026088Switchgrass RhizosphereEAQTPLSRVLASAEVKPQTKRRLEQEKARLNPFALKQEVTRSLKEIASLRRARP
Ga0207648_1199749623300026089Miscanthus RhizosphereARVLASAEVTPETKLRLEQEKARLNPFALKREVDRSLKAIAAQRHARR
Ga0209773_1049604213300027829Bog Forest SoilKVQRIYVAAQTPLARVLASAEVGEATKKRLRQEKAKLNPFALKQAVTRSMKAISTLRRHC
Ga0247685_105265013300028065SoilGGKVQRIYGVAQTPLARVLANTAVSQATKERLVKEKARLNPFALKQVVTRSMKAISAMRRPRH
Ga0265318_1040220013300028577RhizosphereHAAGKVRRIYGAAQTPLARVLASAEVTAATKQRLRQHKAGLNPFALKQTVEHSLKAIAAMRRDPN
Ga0265338_1122367013300028800RhizosphereKEHQAGKVRRIYGAAQTPLARVLASAEVTAATKQRLRQHKAGLNPFALKQTVERSLKVIAAMRRDPN
Ga0302221_1038335513300028806PalsaEKKDGRVRRMYGQAQTPLARVLASAQVSPGTKVRLRAEKGRLNPFALKREVSLGLKAIAALRQERE
Ga0302228_1047589013300028808PalsaKKDGRERRIYGEAQTPLARVLASAQVSQGTKVRLRAEKGRLNPFALKQEVSLGLKAIAAMRQERG
Ga0311334_1146618013300029987FenQTPLARVLASPQVLETTKQRLRQAKARLNPFALKLAVTRSMKLISALRRKGA
Ga0302196_1011248023300030225BogLRRIYGAAQTPLARVLASAEVSAATKKQLLQNKAGLNPFALKQAVTKSLKAITAMRRLRH
Ga0265462_1249830213300030738SoilCKEKKDGPVRRIYGDAQTPLARVLASEQVSAGTKVRLRAEKGRLNPFALKREVSLGLKAIAALRQERE
Ga0265460_1134686423300030740SoilDGRVRRMYGEAQTPLARVLASARVSQETKVRLRAEKGRLNPFALNQEVSLGLKAIAALRQERR
Ga0311366_1141454223300030943FenGKAQTPLARVLASTEVTNETKQKLQEQKARLNPFALKLEVARRLKEIAKLRRMPE
Ga0170823_1100058113300031128Forest SoilVLASAEVSQLTKQRLLQDKARLNPFALKQVVDRSLKKIAALRQARR
Ga0265316_1125345713300031344RhizosphereLARVLASAEVSVATKERLRQHKARLNPFALKQAVTKGMKEIEAMRRLEHH
Ga0170820_1785188213300031446Forest SoilLERKERQDGKLRRVYGAAQTPLTRVLASAEVDAATKTRLQAEQARLNPLVLQEEVAKSLKAIAVLRRACE
Ga0310888_1103828813300031538SoilAQTPLARVLASPEVTPQTKLRLEQEKSQLNPFALKRQVDRSLKRIAAQRQARP
Ga0310686_11752574613300031708SoilEKKDGRVRRMYGDAQTPLARVLASAQVSRGTKVRLRAEKGRLNPFALKQEVSRGLKLIAAMRQEKM
Ga0307475_1151533913300031754Hardwood Forest SoilRKAGKVRRIYGAAQTPLARVLASAEVGPATKERLLQHKARLNPFALKRAVTQSLKAISALRRDRR
Ga0316219_131819723300031759FreshwaterQTPLARVLASAEVSAATKKRLLENKAGLNPFALKQAVTKSLKVIEALRRRRHS
Ga0316217_1040999813300031813FreshwaterGEAQTPLARVLASPEVTPQTKRRLEQAKARLNPFALKQAVDRGLKEIAAMRRAR
Ga0315270_1122536713300032275SedimentIYGAAQTPLARVLASAEVTEATKQRLLQDKARLNPFALKQAVTRSMKAISAMRRHRN
Ga0335078_1253109823300032805SoilVGGKLRRIYGVAQTPLARVLASAEVTEATKKRLLKHKASLNPFALKRAVTQSLKAISALRRDRR
Ga0335081_1113438013300032892SoilPLARVLASAEVSEATKERLRQHKSRLNPFALKQAVTRSLKAISALRRHRP
Ga0335081_1214494323300032892SoilPLARVLASAEVSEATKTRLRQDKARLNPFALRKAVNRSLKAIAAMRRRPA
Ga0316619_1209569123300033414SoilIQGQIKRIYGTAQTPLARVLASPEVTPQTKQRLQQQKVKLNPFALKLEVDRQLKVIASLRRARP
Ga0316629_1116515213300033483SoilGAAQTPLARVLASTEVTEATKQRLRQEKARLNPFALKQAVTQSLKAISAMRRHRN
Ga0316626_1115260913300033485SoilQTPLARVLASAEVTEVTKTRLLNHKASLNPFALKRVVTQSLKAISALRRNHR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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