NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F083299

Metagenome / Metatranscriptome Family F083299

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083299
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 63 residues
Representative Sequence MRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Number of Associated Samples 100
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.23 %
% of genes from short scaffolds (< 2000 bps) 95.58 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.230 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.239 % of family members)
Environment Ontology (ENVO) Unclassified
(29.204 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.062 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.81%    β-sheet: 0.00%    Coil/Unstructured: 44.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00005ABC_tran 83.19
PF01208URO-D 7.96
PF14524Wzt_C 3.54
PF01061ABC2_membrane 0.88
PF02861Clp_N 0.88
PF01063Aminotran_4 0.88
PF13555AAA_29 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 7.96
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 1.77
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.23 %
UnclassifiedrootN/A1.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_100359164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia921Open in IMG/M
3300001686|C688J18823_10186178All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300004081|Ga0063454_100150917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1230Open in IMG/M
3300004114|Ga0062593_101776620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia677Open in IMG/M
3300004153|Ga0063455_100928043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300004157|Ga0062590_100142799All Organisms → cellular organisms → Bacteria1622Open in IMG/M
3300005093|Ga0062594_101446809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria701Open in IMG/M
3300005168|Ga0066809_10088462All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300005179|Ga0066684_10151337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1472Open in IMG/M
3300005180|Ga0066685_10336169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300005180|Ga0066685_10784600All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005332|Ga0066388_102599458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium922Open in IMG/M
3300005338|Ga0068868_100178916All Organisms → cellular organisms → Bacteria1759Open in IMG/M
3300005353|Ga0070669_100566947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium948Open in IMG/M
3300005354|Ga0070675_101194939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria700Open in IMG/M
3300005364|Ga0070673_101051793All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005366|Ga0070659_102051594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300005367|Ga0070667_102297660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300005444|Ga0070694_101424743All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005454|Ga0066687_10100145All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300005468|Ga0070707_101797663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300005545|Ga0070695_100588470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium872Open in IMG/M
3300005563|Ga0068855_101900970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria603Open in IMG/M
3300005598|Ga0066706_10977098All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005614|Ga0068856_101382411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria719Open in IMG/M
3300005713|Ga0066905_101660641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria586Open in IMG/M
3300005764|Ga0066903_103936953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300006028|Ga0070717_10177916All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300006163|Ga0070715_10782208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300006579|Ga0074054_11714541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium761Open in IMG/M
3300006845|Ga0075421_102628507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300006854|Ga0075425_102743141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300009012|Ga0066710_100433884All Organisms → cellular organisms → Bacteria1966Open in IMG/M
3300009012|Ga0066710_103972792All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300009098|Ga0105245_12698295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300009147|Ga0114129_11941588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300009148|Ga0105243_12685734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300009177|Ga0105248_11171885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium869Open in IMG/M
3300010039|Ga0126309_10596714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium694Open in IMG/M
3300010041|Ga0126312_10867329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium657Open in IMG/M
3300010335|Ga0134063_10278628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium801Open in IMG/M
3300010335|Ga0134063_10399668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium674Open in IMG/M
3300010360|Ga0126372_10393144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1262Open in IMG/M
3300010396|Ga0134126_11936778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia645Open in IMG/M
3300010397|Ga0134124_12958811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300010399|Ga0134127_13335758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300010401|Ga0134121_11601187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300012003|Ga0120163_1091189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium676Open in IMG/M
3300012201|Ga0137365_11029756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium596Open in IMG/M
3300012208|Ga0137376_11067471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium691Open in IMG/M
3300012211|Ga0137377_10925969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300012212|Ga0150985_111745897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium677Open in IMG/M
3300012285|Ga0137370_10514832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium733Open in IMG/M
3300012350|Ga0137372_10104132All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300012355|Ga0137369_10574880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300012356|Ga0137371_10688892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium782Open in IMG/M
3300012948|Ga0126375_10300776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1114Open in IMG/M
3300012961|Ga0164302_10999645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300012975|Ga0134110_10205339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium828Open in IMG/M
3300012975|Ga0134110_10335631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300012984|Ga0164309_11909922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300012987|Ga0164307_11321754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300013102|Ga0157371_10733606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium741Open in IMG/M
3300013766|Ga0120181_1070499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium771Open in IMG/M
3300014157|Ga0134078_10672542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300015357|Ga0134072_10445596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300015373|Ga0132257_101328105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium913Open in IMG/M
3300018028|Ga0184608_10134564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1057Open in IMG/M
3300018032|Ga0187788_10349258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300019885|Ga0193747_1142842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300022898|Ga0247745_1081586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300024222|Ga0247691_1007451All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300024222|Ga0247691_1040510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium707Open in IMG/M
3300024224|Ga0247673_1066761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300024232|Ga0247664_1143989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300024246|Ga0247680_1071037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300024287|Ga0247690_1035313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300025922|Ga0207646_11328885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium627Open in IMG/M
3300025927|Ga0207687_11233686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium643Open in IMG/M
3300025934|Ga0207686_11432615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300025938|Ga0207704_10376902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1113Open in IMG/M
3300025941|Ga0207711_10654894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium980Open in IMG/M
3300026078|Ga0207702_10243211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1687Open in IMG/M
3300026316|Ga0209155_1122282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium904Open in IMG/M
3300028381|Ga0268264_12520896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300028711|Ga0307293_10074727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1067Open in IMG/M
3300028718|Ga0307307_10273129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300028718|Ga0307307_10318597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300028719|Ga0307301_10011374Not Available2523Open in IMG/M
3300028719|Ga0307301_10283239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300028755|Ga0307316_10383365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300028755|Ga0307316_10399871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300028771|Ga0307320_10205005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium771Open in IMG/M
3300028778|Ga0307288_10145548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium889Open in IMG/M
3300028778|Ga0307288_10294310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium645Open in IMG/M
3300028796|Ga0307287_10256036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300028799|Ga0307284_10473979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300028807|Ga0307305_10485461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300028811|Ga0307292_10400436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300028812|Ga0247825_10799749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300028824|Ga0307310_10027884All Organisms → cellular organisms → Bacteria2255Open in IMG/M
3300028824|Ga0307310_10637782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300028880|Ga0307300_10026855All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300028881|Ga0307277_10392053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium620Open in IMG/M
3300028884|Ga0307308_10256552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium838Open in IMG/M
3300028884|Ga0307308_10441680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium624Open in IMG/M
3300030511|Ga0268241_10091607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium696Open in IMG/M
3300031547|Ga0310887_10439259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium776Open in IMG/M
3300031720|Ga0307469_11381062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300031720|Ga0307469_12466076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300032180|Ga0307471_101605042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium806Open in IMG/M
3300034090|Ga0326723_0020377All Organisms → cellular organisms → Bacteria2705Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.24%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.19%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.77%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.77%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.89%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012003Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25MEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300024287Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10035916423300000956SoilLRYGNPVTPYVEGLRAVVLQATIPGASLLVYIFVVGPALALIGLWVVQRYDDRFAIEL*
C688J18823_1018617823300001686SoilYGNPVTPYVEGVRAVVLQATVPGLSLLLYIFVVGPLVGLLGLWVVQRYQDRVAIEL*
Ga0063454_10015091713300004081SoilGHRWLVVAMRYGNPITPYVESVRAVVLQAVVPGPTLLAYVFIVGPLMALVGLRVVQRYENSVAIEL*
Ga0062593_10177662023300004114SoilWLILLMRYGNPVTPYVESVRAVVLQHTVPGMSLLVYVFVVGPIVALLGLWVMQRYEDRLAIEL*
Ga0063455_10092804323300004153SoilYGNPVTPYVESVRAVVLQHIVPGTPLLVYTLVVGPLVALLGLRVIRRYEDRLAIEL*
Ga0062590_10014279933300004157SoilVESVRAVVLQHVVPGVPLLLYVFLVGPLLALIGLLIMQRYEDRLAIEL*
Ga0062594_10144680923300005093SoilLLMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0066809_1008846213300005168SoilPVLYGLEQLPAASTHRWAIDLLRYGNPVTPYVEGMRSVVLFGVVPGTTLLLYIFLVGPALAIIGLRVLQRYEDRLAVEL*
Ga0066684_1015133723300005179SoilTPYVEGIRAVVLEATLPGVAILVYICLVVPLTALLGLAVLQRYEDRVAIEL*
Ga0066685_1033616913300005180SoilTPYVEGIRAVVLEATVPGAAILVYIFLVGPLTALLGLAVLQRYEDRVASEL*
Ga0066685_1078460023300005180SoilVTPYVEGFRATLLQATVPGASLLVYIFVVGPTLALLGLWVVQRYEDRLAVEL*
Ga0066388_10259945813300005332Tropical Forest SoilPYVEGVRAVVLQHTVPGAPLLIYIFLVGPLAAVLGLWVVQRYQDRVAIEL*
Ga0068868_10017891613300005338Miscanthus RhizosphereYGNPVTPYVEGFRATLLQDTVPGAGLLLYIFVVGPALALLGLWVVQRYEDRIAVEL*
Ga0070669_10056694723300005353Switchgrass RhizosphereYVESVRAVVLQHVVPGAPLLAYTFVVGPLVALLGLWVMQRYEDRLAIEL*
Ga0070675_10119493923300005354Miscanthus RhizosphereRWLILLMRYGNPVTPYVESVRAVVLQHVVPGAPLLLYVFLVGPLVGLLGLWTMQRFQDRIAIEL*
Ga0070673_10105179323300005364Switchgrass RhizosphereHSHRWLILVMRYGNPVTPYVESVRAVVLQHVVPGTPLLAYTLVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0070659_10205159413300005366Corn RhizosphereMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYVFVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0070667_10229766023300005367Switchgrass RhizosphereVEGVRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQHFEDRIAIEL*
Ga0070694_10142474313300005444Corn, Switchgrass And Miscanthus RhizosphereNPVTPYVESVRAVVLQHVVPGAPLLVYVFVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0066687_1010014513300005454SoilLDQLPAGSAHPWLIDILRYGNPVTPYVEGIRAVLLQATVPGPGVLLYIFLVGPGLAVLGLSVVQRNEDSLAVEL*
Ga0070707_10179766323300005468Corn, Switchgrass And Miscanthus RhizosphereDKLPAAASHQTIIHLLRYGNPVTPYVEGIRAVVLEATVPGMPLLLYIFLVGPIVGLVGLWVLQRYEDRIAIEL*
Ga0070695_10058847013300005545Corn, Switchgrass And Miscanthus RhizosphereTPVLYGLDKLPAAASHQTIIHLLRYGNPVTPYVEGIRAVVLEATVPGMPLLLYIFLVGPIVGLVGLWVLQRYEDRIAIEL*
Ga0068855_10190097013300005563Corn RhizosphereYGNPVTPYVEGVRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQHFEDRIAIEL*
Ga0066706_1097709813300005598SoilNPVTPYVEGIRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQRYEDRVAIEL*
Ga0068856_10138241123300005614Corn RhizosphereYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL*
Ga0066905_10166064113300005713Tropical Forest SoilTPVLYGLDQFSATESHRWLVLVMRYGNPVTPYVEGVRAVVLQHTVPGAPLLIYIFLVGPLAAVLGLWVVQRYQDRVAIEL*
Ga0066903_10393695323300005764Tropical Forest SoilTPVLYALDQFSAAHSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGAPLLIYVFVVGPAFALLGLSMMQRYEDRLAIEL*
Ga0070717_1017791613300006028Corn, Switchgrass And Miscanthus RhizosphereNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL*
Ga0070715_1078220823300006163Corn, Switchgrass And Miscanthus RhizosphereDQFSAAHSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL*
Ga0074054_1171454113300006579SoilVTPYVEGIRGAVLQANVVAAPLLVYIFVVGPALALVGLWVVQRYEDELAVEL*
Ga0075421_10262850723300006845Populus RhizosphereIAVMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYTFVVGPFVALLGLWVMQRYEDRLAIEL*
Ga0075425_10274314123300006854Populus RhizosphereLPAAVQHPWLIDLLRYGNPVTPYVEGLRAVILEGTVPGASLFAYMFLVGPALALVGLSVVQRFEDRLAIEL*
Ga0066710_10043388413300009012Grasslands SoilDQLPAAASHQTVIHLLRYGNPVTPYVEGIRAVVLEATVPGVAILVYIFLVGPLTALLGLAVLQRYEDRVAIEL
Ga0066710_10397279213300009012Grasslands SoilLYGLDQLPAAASHTTIIHLLRYGNPVTPYVEGIRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQRYEDRVAIEL
Ga0105245_1269829523300009098Miscanthus RhizosphereRWLILVMRYGNPVTPYVEGVRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQHFEDRIAIEL*
Ga0114129_1194158823300009147Populus RhizosphereTPIIYSLDLLPAAADHPTLIHLLRYGNPVTPYVEGIRAVTLEATVPGAPILVYIFLVGPLAALLGLWVVQRYEDRVAIEL*
Ga0105243_1268573423300009148Miscanthus RhizosphereAHSHRWLIAVMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYTFLVGPLVALLGLWVMQRYEDRLAIEL*
Ga0105248_1117188513300009177Switchgrass RhizosphereDQFSAAHSHRWLILVMRYGNPVTPYVESVRAVVLQHVVPGTPLLAYTLVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0126309_1059671423300010039Serpentine SoilLRYGNPVTPYVEAVRAVVLQANVPGLSLLLYVFVVGPAVALLGLWVVQRYEDRIAIEL*
Ga0126312_1086732923300010041Serpentine SoilVILLMRYGNPVTPYVESVRAVVLQHVVPGTSLLLYVFLVGPLVALLGLRLLQRFEDRLAIEL*
Ga0134063_1027862823300010335Grasslands SoilPAAASHQTVIHLLRYGNPVTPYVEGIRAVVLQATVPGVAILVYIFLVGPLTALLGLAVLQRYEDRVAIEL*
Ga0134063_1039966823300010335Grasslands SoilIDVMRYGNPVTPYVEGFRATLLQATVPGASLLVYIFVVGPTLALLGLWVVQRYEDRLAVEL*
Ga0126372_1039314413300010360Tropical Forest SoilFSAASSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGATLLVYVFVVGPAVALLGLWVMQRYEDRLAIEL*
Ga0134126_1193677813300010396Terrestrial SoilNPVTPYVEGFRATLLQNTVPGAGLLLYIFVVGPALALLGMWVVQRYEDRIAVEL*
Ga0134124_1251361213300010397Terrestrial SoilESLRAVVLQHVVPGAPLLAYVFVVGPLFALLGLWVMQRFEDRIAIEL*
Ga0134124_1295881113300010397Terrestrial SoilHRWLIVAMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYVFVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0134127_1333575823300010399Terrestrial SoilMRYGNPVTPYVESVRAVVLQHVVPGAPLLAYTFVVGPLVALLGLWVMQRYEDRLAIEL*
Ga0134121_1160118723300010401Terrestrial SoilPVLYGLDQFSAAHSHRWLIVLMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYTFVVGPLVALLGLWVMQRYEDRLAIEL*
Ga0120163_109118923300012003PermafrostVIYLLRYGNPVTPYVEGIRAVTLQAVVPGAALLAYIFLVGPLAALFGLWVVQRYEDRVAIEL*
Ga0137365_1102975613300012201Vadose Zone SoilPVTPYVEGIRAVVLEATVPGVAILVYIFLVGPLTALLGLAVLQRFEDRVAIEL*
Ga0137376_1106747113300012208Vadose Zone SoilHPWLIDLLRYGNPVTPYVEGIRAVLLQATVPGPGLLLYIFLVGPAFAVAGLSVVQRYEDTLAVEL*
Ga0137377_1092596913300012211Vadose Zone SoilLLRYGNPVTPYVEGIRAVLLQATVPGSGELLYIFLVGPAFAVLGLGVVQRHEDQLAVEL*
Ga0150985_11174589713300012212Avena Fatua RhizosphereMRYGNPVTPYVESVRAVVLQHVVPGTPLLAYTLVVGPLVALLGLRVIQRYEDRLAIEL*
Ga0137370_1051483223300012285Vadose Zone SoilAAAHSTVIHLMRYGNPVTPDVEGFRAVVLEATVPGASLLLYIFLVGPGLAVLGLSVVQRNEDSLAVEL*
Ga0137372_1010413213300012350Vadose Zone SoilAAASHRWLIHVLRYGNPVTPYVEGFRATLLQATVPGAALLVYIFVVGPALALLGLWVVQRFEDRLAVEL*
Ga0137369_1057488023300012355Vadose Zone SoilYGLEQLPAAASHRWLIHVLRYGNPVTPYVEGFRATLLQATVPGAALLVYIFVVGPALALLGLWVVQRFEDRLAVEL*
Ga0137371_1068889223300012356Vadose Zone SoilLPAAASHTTIIHLLRYGNPVTPYVEGIRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQRYEDRVAIEL*
Ga0126375_1030077623300012948Tropical Forest SoilDLLPAAAQHPWLIDLLRYGNPVTPYVEGLRAVILEGTVPGASLLAYIFVVGPVLALVGLAVLQRFEDRLAIEL*
Ga0164302_1099964523300012961SoilDQFHVAQGARWLVVRMRYGNLVTPYVESVRAVVLQAVVPGPTLLLYVFIVGPLMALIGLRVVQRYENRVAIEL*
Ga0134110_1020533923300012975Grasslands SoilLYGLDQLPAGSTHPWLIDLLRYGNPVTPYVEGIRAVLLQATVPGPGVLLYIFLVGPAFAVVGLGVVQRYEDTLAVEL*
Ga0134110_1033563113300012975Grasslands SoilLYGLEQLPTAAQHRWLIDIMRYGNPVTPYVEGIRAVSLQATVPGAGLLIYIFTVGPLLGIIGLRVLQRFEDQLAVEL*
Ga0164309_1190992223300012984SoilDLMRYGNPVTPYVEGFRATLLQDTVPGATLLVYIFMVGPALALLGLWVVQRYEDRLAVEL
Ga0164307_1132175413300012987SoilPVTPYVESGRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL*
Ga0157371_1073360623300013102Corn RhizosphereIDVMRYGNPVTPYVEGFRATLLQDTVPGAALLLYIFVVGPALALLGLWVVQRYEDRIAVEL*
Ga0120181_107049923300013766PermafrostVLYGLDQLPAASAHRPVIYLLRYGNPVTPYVEGIRAVTLQAVVPGAALLAYIFLVGPLMALIGLWVVQRYEDRVAIEL*
Ga0134078_1067254223300014157Grasslands SoilYGNPVTPYVEGIRAVLLQATVPGPGVLLYIFLVGPAFAVVGLSVVQRHEDQLAVEL*
Ga0134072_1044559623300015357Grasslands SoilLEQLPAAASHRWLIDVMRYGNPVTPYVEGFRATLLQATVPGASLLVYIFVVGPTLALLGLWVVQRYEDRLAVEL*
Ga0132257_10132810513300015373Arabidopsis RhizospherePYVESVRAVVLQHTIPGMSLLIYVFVVGPAVALLGLLVMQRYEDRLAIEL*
Ga0184608_1013456423300018028Groundwater SedimentGHEYLIKLIRFGNPVTPYVETIRAVLLQGALPGAASLVYVFVVGPAVFLLGLWVFQLYDDEIAVEL
Ga0187788_1034925813300018032Tropical PeatlandNPVTPYVEGMRSVVLFGVVPGATLLLYIFLVGPALALTGLYVLQRYEDRLAVEL
Ga0193747_114284223300019885SoilGNPVTPYVEGIRASLLQATVPGASLLVYVFVAGPTLALLGLWVVQRYEDQVAVEL
Ga0247745_108158613300022898SoilILLMRYGNPVTPYVESVRAVVLQHVVPGVPLLLYVFLVGPLLALIGLLIMQRYEDRLAIE
Ga0247691_100745113300024222SoilYALDQFSAANSHRWLILLMRYANPVTPYVESVRAVVLQHTVPGVSLLVYVFAVGPVVALLGLWVMQRYEDRLAIEL
Ga0247691_104051023300024222SoilALEQFSAAHSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0247673_106676113300024224SoilPVLYALDQFSAANSHRWLILLMRYANPVTPYVESVRAVVLQHTVPGVSLLVYVFAVGPVVALLGLWVMQRYEDRLAIEL
Ga0247664_114398923300024232SoilGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0247680_107103723300024246SoilAAHSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0247690_103531313300024287SoilVLYALEQFSAAHSHRWLILLMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0207646_1132888513300025922Corn, Switchgrass And Miscanthus RhizosphereTPVLYGLDKLPAAASHQTIIHLLRYGNPVTPYVEGIRAVVLEATVPGMPLLLYIFLVGPIVGLVGLWVLQRYEDRIAIEL
Ga0207687_1123368613300025927Miscanthus RhizosphereLEQFSAASSHRWLILVMRYGNPVTPYVEGVRAVVLQATVPGAPLLLYIFLVGPLVALLGLWVVQHFEDRIAIEL
Ga0207686_1143261513300025934Miscanthus RhizosphereVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0207704_1037690213300025938Miscanthus RhizosphereTPYVESVRAVVLQHVVPGAPLLAYTFVVGPVVALLGLWVMQRYEDRLAIEL
Ga0207711_1065489423300025941Switchgrass RhizosphereLLMRYGNPVTPYVESVRAVVLQHVVPGAPLLLYVFVVGPLVALLGLWVTQRFEDRIAIEL
Ga0207702_1024321133300026078Corn RhizosphereWLIDLMRYGNPVTPYVEGFRATLLQATVPGAGLLVYIFVVGPSLALLGLWVVQRYEDRLAVEL
Ga0209155_112228213300026316SoilEGIRAVLLQATVPGPGVLLYIFLVGPGLAMLGLSVVQRNEDSLAVEL
Ga0268264_1252089613300028381Switchgrass RhizosphereYVESVRAVVLQHVVPGAPLLLYVFLVGPLVGLLGLWTMQRFQDRIAIEL
Ga0307293_1007472733300028711SoilNPVTPYVETIRAVLLQGALPGAASLVYVFVVGPAVFLLGLWVFQLYDDEIAVEL
Ga0307307_1027312913300028718SoilIYLLRYGNPITPYVEGIRAVTLQAVVPGAALLAYIFLAGPLMALLGLWVVQRYEDRLAVE
Ga0307307_1031859713300028718SoilSAAHSHRWLIVVMRYGNPVTPYVESVRAVVLQHVVPGAPLLAYTFVVGPLVALLGLWVMQRYEDRLAIEL
Ga0307301_1001137413300028719SoilPYVEGIRAVTLQAVVPGAALLAYIFLVGPLMALLGLWVVQRYEDRLAIEL
Ga0307301_1028323923300028719SoilHRWLIVLMRYGNPVTPYVEGVRAVVLQATVPGVTLLLYIFLVGPLVALLGLRVVQRYEDRLAIEL
Ga0307316_1038336513300028755SoilLLRYGNPVTPYVEGLRAVILQATVPGATLLAYIFLVGPAFALLGLWVVQRYDDRFAIEL
Ga0307316_1039987123300028755SoilLILLLRYGNPVTPYVEGVRAVVLQATVPGAPLLLYIFLVGPLVALFGLWVVQHFEDRVAIEL
Ga0307320_1020500523300028771SoilPYVEGLRAVTLEGVVPGATLLVYIFLVGPVLALIGLWVMQRYEDRLAIEL
Ga0307288_1014554823300028778SoilAHSHRWLIVVMRYGNPVTPYVESVRAVVLQHVVPGAPLLAYTFVVGPLVALLGLWVMQRYEDRLAIEL
Ga0307288_1029431013300028778SoilVTPYVESVRAVVLQHVVPGTTLLVYVFLVGPLVALLGLSVMQRFEDRIAIEL
Ga0307287_1025603613300028796SoilYGLEQLPGAAEHRPLIYLLRYGNPITPYVEGIRAVTLQAVVPGAALLAYIFLVGPLMALLGLWVVQRYEDRLAIEL
Ga0307284_1047397913300028799SoilLLRYGNPITPYVEGIRAVTLQAVVPGAALLAYIFLAGPLMALLGLWVVQRYEDRLAIEL
Ga0307305_1048546123300028807SoilTPYVEGLRGVILQATVPGATLLAYIFLVGPAFALLGLWVVQRYDDRFAIEL
Ga0307292_1040043613300028811SoilRWAIDLIRYGNPVTPYVEGIRAVMLEATVPGVPLLVYIFAVGPALAVLGLRVLQRYEDRLAVEL
Ga0247825_1079974923300028812SoilFSAAHSHRWLIAVMRYGNPVTPYVESVRAVVLQHVVPGAPLLVYTFVVGPLVALLGLWVMQRYEDRLAIEL
Ga0307310_1002788413300028824SoilHRPLIYLLRYGNPITPYVEGIRAVTLQAVVPGAALLAYIFLVGPLMALLGLWVVQRYEDRLAIEL
Ga0307310_1063778213300028824SoilYSLDLFPAAAAHPWVIHLMRYANPVTPYVEGIRAVTLQAVVPGASLLLYIFLVGPLTALLGLWVVQRYEDRVAIEL
Ga0307300_1002685513300028880SoilTPYVESVRAVVLQATVPGVTLLLYIFLVGPLVALLGLRVVQRYEDRLAIEL
Ga0307277_1039205313300028881SoilYGLDQLPAADTHRWAIDLIRYGNPVTPYVEGIRAVMLEATVPGVPLLVYIFAVGPALAVLGLRVLQRYEDRLAVEL
Ga0307308_1025655223300028884SoilSTLIHLLRYGNPVTPYVEGIRAVVLEATVPGAALIAYIFLVGPLVALVGLWLLQRYEDRVAIEL
Ga0307308_1044168013300028884SoilVLLQATVPGPGVLLYIFLVGPAFAVVGLGVVQRYEDTLAVEL
Ga0268241_1009160723300030511SoilPVTPYVESVRAVVLQHTVPGAPLLVYVFLVGPAFALLGLWVMQRYEDRLAIEL
Ga0310887_1043925913300031547SoilMRYGNPVTPYVESVRAVVLQHTVPGAPLLVYVFVVGPAFALLGLWVMQRYEDRLAIEL
Ga0307469_1138106223300031720Hardwood Forest SoilDRFPAAASHSTVIHVMRYANPVTPYVEGVRAVVLEATVPGASLLLYIFLVGPLVALLGLWVTQRYEDRVAIEL
Ga0307469_1246607613300031720Hardwood Forest SoilGIRAVLLQATVPGPAELLYIFLVGPALAVLGLSVVQRHEDQLAVEL
Ga0307471_10160504223300032180Hardwood Forest SoilWLIDLLRYGNPVTPYVEGIRAVLLQATVPGTGELLYIFLVGPGLAVLGLSVVQRYEDQLAVEL
Ga0326723_0020377_2490_27053300034090Peat SoilLPAASTHRWLIDLLRYGNPVTPYVEGMRSVVLFGVVPGATLLLYIFLVGPALAIIGLRVLQRYEDRLAVEL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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