Metagenome Family F083533

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083533
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	47 residues
Representative Sequence	TPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Number of Associated Samples	66
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.63 %
% of genes near scaffold ends (potentially truncated)	86.61 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.107 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.22% β-sheet: 0.00% Coil/Unstructured: 17.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05099	TerB	10.81
PF05443	ROS_MUCR	2.70
PF13193	AMP-binding_C	2.70
PF04879	Molybdop_Fe4S4	1.80
PF01425	Amidase	1.80
PF02653	BPD_transp_2	1.80
PF13185	GAF_2	1.80
PF08238	Sel1	0.90
PF04392	ABC_sub_bind	0.90
PF13276	HTH_21	0.90
PF00732	GMC_oxred_N	0.90
PF00665	rve	0.90
PF00211	Guanylate_cyc	0.90
PF07505	DUF5131	0.90
PF00296	Bac_luciferase	0.90
PF04828	GFA	0.90
PF13683	rve_3	0.90
PF00300	His_Phos_1	0.90
PF00561	Abhydrolase_1	0.90
PF03641	Lysine_decarbox	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	10.81
COG4957	Predicted transcriptional regulator	Transcription [K]	2.70
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.80
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.90
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.90
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.90
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.90
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.90
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.90
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
All Organisms	root	All Organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
cellular organisms	root	All Organisms → cellular organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.79 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.79 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
unclassified Candidatus Tectomicrobia	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia	0.89 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.79 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.79 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.89 %
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	0.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.89 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.89 %
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.79 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.89 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.89 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.89 %
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.79 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
Caulobacter sp. K31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	0.89 %
Bosea sp. WAO	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. WAO	0.89 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.89 %
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Streptomyces sp. WAC05374	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC05374	1.79 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
Caulobacter sp. K31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	0.89 %
Bosea sp. WAO	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. WAO	0.89 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.89 %
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_105586810	Not Available	637	Open in IMG/M
3300010046\|Ga0126384_10884634	Not Available	806	Open in IMG/M
3300010048\|Ga0126373_12251810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300010048\|Ga0126373_12475125	Not Available	578	Open in IMG/M
3300010360\|Ga0126372_12695055	Not Available	549	Open in IMG/M
3300010360\|Ga0126372_12695055	Not Available	549	Open in IMG/M
3300010366\|Ga0126379_11055709	Not Available	918	Open in IMG/M
3300010366\|Ga0126379_13471031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. WAO	528	Open in IMG/M
3300010376\|Ga0126381_100354509	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → unclassified Candidatus Tectomicrobia → Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	2029	Open in IMG/M
3300010376\|Ga0126381_102039369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300010376\|Ga0126381_102525728	Not Available	736	Open in IMG/M
3300010376\|Ga0126381_104916876	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300016270\|Ga0182036_10529447	Not Available	937	Open in IMG/M
3300016270\|Ga0182036_11094593	Not Available	660	Open in IMG/M
3300016294\|Ga0182041_12007725	Not Available	538	Open in IMG/M
3300016319\|Ga0182033_10252341	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300016319\|Ga0182033_10318070	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300016319\|Ga0182033_10799582	Not Available	831	Open in IMG/M
3300016319\|Ga0182033_11535019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300016357\|Ga0182032_10052366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2656	Open in IMG/M
3300016357\|Ga0182032_11282600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300016387\|Ga0182040_10920755	Not Available	726	Open in IMG/M
3300016404\|Ga0182037_10506273	Not Available	1013	Open in IMG/M
3300016445\|Ga0182038_10563757	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300016445\|Ga0182038_12065465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300016445\|Ga0182038_12195860	Not Available	500	Open in IMG/M
3300021560\|Ga0126371_10903192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1027	Open in IMG/M
3300027874\|Ga0209465_10242192	Not Available	902	Open in IMG/M
3300031057\|Ga0170834_103554459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	511	Open in IMG/M
3300031231\|Ga0170824_128335476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300031543\|Ga0318516_10463751	Not Available	728	Open in IMG/M
3300031543\|Ga0318516_10750470	Not Available	553	Open in IMG/M
3300031544\|Ga0318534_10766752	Not Available	543	Open in IMG/M
3300031545\|Ga0318541_10845844	Not Available	510	Open in IMG/M
3300031573\|Ga0310915_11067057	Not Available	562	Open in IMG/M
3300031668\|Ga0318542_10218190	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300031668\|Ga0318542_10452307	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031668\|Ga0318542_10677613	Not Available	539	Open in IMG/M
3300031679\|Ga0318561_10851669	Not Available	501	Open in IMG/M
3300031680\|Ga0318574_10267106	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300031719\|Ga0306917_10488410	Not Available	966	Open in IMG/M
3300031719\|Ga0306917_10952538	Not Available	671	Open in IMG/M
3300031723\|Ga0318493_10572900	Not Available	628	Open in IMG/M
3300031744\|Ga0306918_10114163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1946	Open in IMG/M
3300031744\|Ga0306918_11025036	Not Available	641	Open in IMG/M
3300031748\|Ga0318492_10508953	Not Available	639	Open in IMG/M
3300031751\|Ga0318494_10359038	Not Available	843	Open in IMG/M
3300031751\|Ga0318494_10556483	Not Available	670	Open in IMG/M
3300031768\|Ga0318509_10717146	Not Available	555	Open in IMG/M
3300031770\|Ga0318521_10437601	Not Available	782	Open in IMG/M
3300031777\|Ga0318543_10473694	Not Available	561	Open in IMG/M
3300031778\|Ga0318498_10228776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300031779\|Ga0318566_10611652	Not Available	530	Open in IMG/M
3300031779\|Ga0318566_10619465	Not Available	526	Open in IMG/M
3300031781\|Ga0318547_10940265	Not Available	540	Open in IMG/M
3300031792\|Ga0318529_10274473	Not Available	785	Open in IMG/M
3300031793\|Ga0318548_10267377	Not Available	840	Open in IMG/M
3300031795\|Ga0318557_10141500	Not Available	1085	Open in IMG/M
3300031795\|Ga0318557_10319864	Not Available	713	Open in IMG/M
3300031805\|Ga0318497_10436108	Not Available	733	Open in IMG/M
3300031821\|Ga0318567_10538009	Not Available	663	Open in IMG/M
3300031821\|Ga0318567_10589276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300031821\|Ga0318567_10684396	Not Available	582	Open in IMG/M
3300031846\|Ga0318512_10610935	Not Available	556	Open in IMG/M
3300031860\|Ga0318495_10159360	Not Available	1018	Open in IMG/M
3300031879\|Ga0306919_10720217	Not Available	768	Open in IMG/M
3300031890\|Ga0306925_10109411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC05374	2947	Open in IMG/M
3300031890\|Ga0306925_11009977	Not Available	847	Open in IMG/M
3300031910\|Ga0306923_10286787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1882	Open in IMG/M
3300031910\|Ga0306923_10457883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1446	Open in IMG/M
3300031910\|Ga0306923_11341960	Not Available	756	Open in IMG/M
3300031910\|Ga0306923_11516991	Not Available	700	Open in IMG/M
3300031912\|Ga0306921_10025002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6601	Open in IMG/M
3300031912\|Ga0306921_10331938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1779	Open in IMG/M
3300031912\|Ga0306921_10333574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1774	Open in IMG/M
3300031941\|Ga0310912_10046099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC05374	3045	Open in IMG/M
3300031941\|Ga0310912_10254457	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300031942\|Ga0310916_10638661	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	903	Open in IMG/M
3300031946\|Ga0310910_10337605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1189	Open in IMG/M
3300031947\|Ga0310909_10514626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1003	Open in IMG/M
3300031947\|Ga0310909_10697818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	843	Open in IMG/M
3300031947\|Ga0310909_11195389	Not Available	615	Open in IMG/M
3300031947\|Ga0310909_11520986	Not Available	532	Open in IMG/M
3300032001\|Ga0306922_10395964	Not Available	1479	Open in IMG/M
3300032001\|Ga0306922_10432107	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300032001\|Ga0306922_11498302	Not Available	674	Open in IMG/M
3300032010\|Ga0318569_10455268	Not Available	597	Open in IMG/M
3300032035\|Ga0310911_10213073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1101	Open in IMG/M
3300032035\|Ga0310911_10765767	Not Available	558	Open in IMG/M
3300032039\|Ga0318559_10194191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300032039\|Ga0318559_10578647	Not Available	524	Open in IMG/M
3300032041\|Ga0318549_10183284	Not Available	938	Open in IMG/M
3300032054\|Ga0318570_10291757	Not Available	741	Open in IMG/M
3300032055\|Ga0318575_10377603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300032064\|Ga0318510_10275371	Not Available	696	Open in IMG/M
3300032076\|Ga0306924_10198491	Not Available	2303	Open in IMG/M
3300032076\|Ga0306924_10985250	Not Available	926	Open in IMG/M
3300032090\|Ga0318518_10238511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300032091\|Ga0318577_10085349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1464	Open in IMG/M
3300032094\|Ga0318540_10522028	Not Available	573	Open in IMG/M
3300032261\|Ga0306920_100192351	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
3300032261\|Ga0306920_100909203	Not Available	1286	Open in IMG/M
3300032261\|Ga0306920_103127167	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300032261\|Ga0306920_103643412	Not Available	566	Open in IMG/M
3300032261\|Ga0306920_104350719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300033289\|Ga0310914_10079695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2776	Open in IMG/M
3300033289\|Ga0310914_10403355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1237	Open in IMG/M
3300033290\|Ga0318519_10969607	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.21%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1055868101	3300005332	Tropical Forest Soil	WCVIEAVACVVAGLIKEPAARRYYGRALDRYSRDLASRAG*
Ga0126384_108846341	3300010046	Tropical Forest Soil	LKVIMSELEREPRTRDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSGDFTTAVG*
Ga0126373_122518102	3300010048	Tropical Forest Soil	EPRTPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFTRAADNPGL*
Ga0126373_124751251	3300010048	Tropical Forest Soil	EPRAQGNVWCVIDAIACVVAGLTKEPVALRYYVRVLDDYSRDLANVRQ*
Ga0126372_126950551	3300010360	Tropical Forest Soil	VPELNREPRTPDNVWWVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG*
Ga0126372_126950553	3300010360	Tropical Forest Soil	ELNREPRTPDNVWCVIDAVACVVAGLIKEPVARCYYGRALDHYGRDLAARAG*
Ga0126379_110557091	3300010366	Tropical Forest Soil	EVIAPELNREPRTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG*
Ga0126379_134710312	3300010366	Tropical Forest Soil	EREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFTARSS*
Ga0126381_1003545094	3300010376	Tropical Forest Soil	PDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFATAADNPSS*
Ga0126381_1020393692	3300010376	Tropical Forest Soil	IMSELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFTARSS*
Ga0126381_1025257283	3300010376	Tropical Forest Soil	EPRTPDNVWCVIEAVACVVAGLIKEPAARRYYERALDHYSRDLASRAG*
Ga0126381_1049168763	3300010376	Tropical Forest Soil	IAPELNREPRTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSHDLASRAG*
Ga0182036_105294471	3300016270	Soil	TPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0182036_107799261	3300016270	Soil	PDNVWCVIEAVACVVAGLMEPAARRHYGRALDQYSRDLASRTG
Ga0182036_110945931	3300016270	Soil	AVACVVAGLIKEPEALRYYGRALNRYSRDFTARSS
Ga0182041_120077251	3300016294	Soil	LNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0182033_102523412	3300016319	Soil	DNVWCVIEAVACVVAGLIKGAAARRYYGRALDHYSRDLAGRAG
Ga0182033_103180702	3300016319	Soil	DNVWCVIDAVACVVAGLIKEPVARRYYGRTLDHYSRDLAARAG
Ga0182033_107995821	3300016319	Soil	DNVWCVINAIACVVAGLIKEPAALRYYVRALDNYSRDLANVRQ
Ga0182033_115350191	3300016319	Soil	LPELRTRFEAVACVVAGLIKEPVARRYYGRALDHYSHDLASR
Ga0182032_100523665	3300016357	Soil	VIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0182032_112826002	3300016357	Soil	APELNREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAR
Ga0182040_109207551	3300016387	Soil	VVLIDAVACVVAGLIKEPVARRYYGRALDHYSRDLA
Ga0182037_105062732	3300016404	Soil	PELEREPRTPDNVWCVLDAVACVVAGLIKEPEAMRYYCRALNHYSRDFAARSS
Ga0182038_105637571	3300016445	Soil	PDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0182038_120654651	3300016445	Soil	VIVPELNREPRTPDNVWCVIDAVACVVAGLIKEPVARQYYGRALDHYSRDLAARAG
Ga0182038_121958601	3300016445	Soil	WCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0126371_109031923	3300021560	Tropical Forest Soil	ALWCVVDAAACLVTGLIKEPEALHYYRRALDNYRRDFAARSS
Ga0209465_102421922	3300027874	Tropical Forest Soil	MSELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFATAADNPSS
Ga0170834_1035544591	3300031057	Forest Soil	MPELNREPRTQDNVWCVIDAIACVVAGLTKEPVALRYYVCALDNYGRDLANVRQ
Ga0170824_1283354762	3300031231	Forest Soil	MPELNREPRTQDNVWCVIDAIACVVAGLTKEPVALRYYVRALDNYGRDLANVRQ
Ga0318516_104637511	3300031543	Soil	DNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAR
Ga0318516_107504701	3300031543	Soil	VPELNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRTLDHYSRDLAARAG
Ga0318534_107667521	3300031544	Soil	NVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318541_108458441	3300031545	Soil	PRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0310915_110670571	3300031573	Soil	LNRQPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318542_102181902	3300031668	Soil	VWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318542_104523071	3300031668	Soil	DNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLAARAG
Ga0318542_106776131	3300031668	Soil	PELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0318561_108516693	3300031679	Soil	VLEVIVPELNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318574_102671062	3300031680	Soil	VWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLAARAG
Ga0306917_104884102	3300031719	Soil	DNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0306917_109525381	3300031719	Soil	DNVWCVIDAIACVVAGLIKEPVARRYYGHALDHYSRDLAARAG
Ga0318493_105729002	3300031723	Soil	EVLAPELNREPRTPDNIWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0306918_101141632	3300031744	Soil	IEAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0306918_101193073	3300031744	Soil	ELNREPRTPDNVWCVIEAVACVVAGLMEPAARRHYGRALDQYSRDLASRTG
Ga0306918_110250361	3300031744	Soil	WCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318492_105089531	3300031748	Soil	NREPRTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRVLASRAV
Ga0318494_103590381	3300031751	Soil	AIACVVAGLIKEPAALRYYGRALDNYSRDLAMRAG
Ga0318494_105564832	3300031751	Soil	PDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318509_107171461	3300031768	Soil	VWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG
Ga0318521_104376011	3300031770	Soil	REPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318543_104736941	3300031777	Soil	PDNVWCVIEAVACVVAGLIKEPAARRYYGRALDDYSRDLASRAG
Ga0318498_102287762	3300031778	Soil	LNREPRTPDNVWCVIEAVACVVAGLTKEPVARRYYGRALDHYSRDLASRAR
Ga0318566_106116521	3300031779	Soil	EPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318566_106194651	3300031779	Soil	VPELNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318547_109402651	3300031781	Soil	IMSELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFTARSS
Ga0318529_102744731	3300031792	Soil	REPRTSDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318548_102673772	3300031793	Soil	PELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSRDFAARSS
Ga0318557_101415001	3300031795	Soil	PRTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDDYSRDLASRAG
Ga0318557_103198642	3300031795	Soil	WCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318497_104361081	3300031805	Soil	VWCVINAIACVVAGLIKEPAALRYYGRALDNYSRDLAMRAG
Ga0318567_105380091	3300031821	Soil	NREPRTQDNVWCVIDAIACVVAGLIKEPAALRYYGRALDNYSRDLAMRAG
Ga0318567_105892761	3300031821	Soil	PENVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318567_106843961	3300031821	Soil	YHVRTRARAAPPDNVWCVLDAVACVVAGLIKEPEALRYYGRALNRYSRDFTARSS
Ga0318512_106109351	3300031846	Soil	IMPELNREPRTQDNVWCVIDAIACVVAGLIKEPAALRYYGRALDNYSRDLAMRAG
Ga0318495_101593602	3300031860	Soil	VPELNREPRTSDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRNLAARAG
Ga0306919_106178451	3300031879	Soil	IEAVACVVAGLMEPAARRHYGRALDQYSRDLASRTG
Ga0306919_107202172	3300031879	Soil	EPRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0306925_101094115	3300031890	Soil	NVIMPELEREPRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0306925_110099771	3300031890	Soil	TPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG
Ga0306923_102867871	3300031910	Soil	EAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0306923_104578831	3300031910	Soil	LNREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0306923_113419601	3300031910	Soil	ELSREPRTPDNVWCVIEAVACVVAGLTKEPVARRYYGRALDHYSRDLASRAG
Ga0306923_115169911	3300031910	Soil	NREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYARALDHYSRDLAARAG
Ga0306921_100250022	3300031912	Soil	MPELNREPHTQDNVWCVINAIACVVAGLTKEPVALRYYVRALDNYSRDLANVRQ
Ga0306921_103319384	3300031912	Soil	KLNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0306921_103335741	3300031912	Soil	EREPRTPDNVWCVLDAVACVVAGLIKEPESLRYYCRALNHYSREFAARSS
Ga0310912_100460991	3300031941	Soil	PRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0310912_102544574	3300031941	Soil	PRTPDNVWCVLDAVACVVAGLIKEPESLRYYCRALNHYSREFAARSS
Ga0310916_106386611	3300031942	Soil	VIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0310910_103376052	3300031946	Soil	CVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLAARAG
Ga0310909_105146262	3300031947	Soil	IAPELNREPRTPDNVWCVIEAVACVVAGLIKEPVAQRYYGRALDHYGRDLAARAG
Ga0310909_106978181	3300031947	Soil	DAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0310909_111953891	3300031947	Soil	DNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG
Ga0310909_115209861	3300031947	Soil	RTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0306922_103959643	3300032001	Soil	VVLIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAVRAG
Ga0306922_104321071	3300032001	Soil	NVWCVLDAVACVVAGLIKEPESLRYYCRALNHYSREFAARSS
Ga0306922_114983021	3300032001	Soil	QPRTPDNVWCVIDAVACVVAGLIKELVARRYYGRALDHYSRDLAPRAG
Ga0318569_104552682	3300032010	Soil	NVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0310911_102130732	3300032035	Soil	PRTPDNVWCVIDAVACVVAGLIKELVARRYYGRALDHYSRDLAPRAG
Ga0310911_107657671	3300032035	Soil	ELNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318559_101941911	3300032039	Soil	VEVIVPELNREPRTPENVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318559_105786472	3300032039	Soil	RTPDNVWCVLDAVACVVAGLIKEPESLRYYCRALNHYSRDFAARSS
Ga0318549_101832841	3300032041	Soil	RQPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318570_102917572	3300032054	Soil	IVPELNREPRTPDNVWCVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0318575_103776032	3300032055	Soil	VPELNREPRTPENVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318533_105784082	3300032059	Soil	PVVAPRTPDNVWCVIEAVACVVAGLMEPAARRHYGRALDQYSRDLASRTG
Ga0318510_102753711	3300032064	Soil	TQDNVWCVINAIACVVAELIKEPAALRYYGRALDNYSRDLAMRAG
Ga0306924_101984912	3300032076	Soil	CVIDAVACVVAGLIKEPVARRYYGRALDHYSRDLAARAG
Ga0306924_109852501	3300032076	Soil	PRTPDNVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSRDFAARSS
Ga0318518_102385111	3300032090	Soil	CVIDAVACVVAGLIKELVARRYYGRALDHYSRDLAPRAG
Ga0318577_100853493	3300032091	Soil	APELNREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318540_105220281	3300032094	Soil	PDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG
Ga0306920_1001923511	3300032261	Soil	NVWCVLDAVACVVAGLIKEPEALRYYCRALNHYSREFAARSS
Ga0306920_1009092034	3300032261	Soil	WCVIDAVACVVAGLIKEPVARQYYGRALDHYSRDLAARAG
Ga0306920_1031271672	3300032261	Soil	RTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLAARAG
Ga0306920_1036434121	3300032261	Soil	RTPDNVWCVIEAVACVVAGLIKEPAARRYYGRALDHYSRDLASRAG
Ga0306920_1043507192	3300032261	Soil	LNREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAR
Ga0310914_100796953	3300033289	Soil	LNREPRTPDNVWCVIEAVACVVAGLMEPAAWRHYGRALDQYSRDLASRTG
Ga0310914_104033553	3300033289	Soil	EVIAPELNREPRTPDNVWCVIEAVACVVAGLIKEPVARRYYGRALDHYSRDLASRAG
Ga0318519_109696071	3300033290	Soil	VLDAVACVVAGLIKEPEALRYYCRALNHYSRDFAARSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083533

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences