NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F083625

Metagenome / Metatranscriptome Family F083625

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083625
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 62 residues
Representative Sequence MKKRQVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA
Number of Associated Samples 87
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 70.54 %
% of genes near scaffold ends (potentially truncated) 28.57 %
% of genes from short scaffolds (< 2000 bps) 100.00 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.286 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(63.393 % of family members)
Environment Ontology (ENVO) Unclassified
(83.036 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(75.893 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.89%    β-sheet: 0.00%    Coil/Unstructured: 81.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.29 %
All OrganismsrootAll Organisms35.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005347|Ga0070668_100687250Not Available901Open in IMG/M
3300005365|Ga0070688_101427112Not Available562Open in IMG/M
3300005367|Ga0070667_102167324Not Available524Open in IMG/M
3300005549|Ga0070704_100831933Not Available827Open in IMG/M
3300005842|Ga0068858_101763219Not Available611Open in IMG/M
3300009092|Ga0105250_10521065All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum542Open in IMG/M
3300009553|Ga0105249_10734462Not Available1049Open in IMG/M
3300009553|Ga0105249_11607970Not Available722Open in IMG/M
3300009975|Ga0105129_106121All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum722Open in IMG/M
3300009976|Ga0105128_108349Not Available678Open in IMG/M
3300009980|Ga0105135_113864All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum653Open in IMG/M
3300009989|Ga0105131_111102Not Available780Open in IMG/M
3300009990|Ga0105132_121387Not Available641Open in IMG/M
3300009990|Ga0105132_138324Not Available534Open in IMG/M
3300009994|Ga0105126_1028571All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum646Open in IMG/M
3300009994|Ga0105126_1029093All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum642Open in IMG/M
3300009995|Ga0105139_1025614Not Available917Open in IMG/M
3300009995|Ga0105139_1052705Not Available720Open in IMG/M
3300010397|Ga0134124_11761915All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum653Open in IMG/M
3300010397|Ga0134124_12161678Not Available596Open in IMG/M
3300010397|Ga0134124_12625311All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum547Open in IMG/M
3300010400|Ga0134122_12723399All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum547Open in IMG/M
3300010401|Ga0134121_12731626All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum539Open in IMG/M
3300012949|Ga0153798_10224966Not Available652Open in IMG/M
3300014326|Ga0157380_13228649Not Available521Open in IMG/M
3300014968|Ga0157379_12102395All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum559Open in IMG/M
3300015270|Ga0182183_1016884Not Available844Open in IMG/M
3300015270|Ga0182183_1023367All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum773Open in IMG/M
3300015270|Ga0182183_1072660All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum550Open in IMG/M
3300015273|Ga0182102_1011227Not Available730Open in IMG/M
3300015273|Ga0182102_1034261Not Available550Open in IMG/M
3300015278|Ga0182099_1026997Not Available666Open in IMG/M
3300015278|Ga0182099_1068547All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum514Open in IMG/M
3300015280|Ga0182100_1086262Not Available530Open in IMG/M
3300015290|Ga0182105_1027668Not Available792Open in IMG/M
3300015290|Ga0182105_1059433Not Available622Open in IMG/M
3300015293|Ga0182103_1007446All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1095Open in IMG/M
3300015293|Ga0182103_1039613Not Available686Open in IMG/M
3300015293|Ga0182103_1076484Not Available559Open in IMG/M
3300015297|Ga0182104_1096422Not Available546Open in IMG/M
3300015301|Ga0182184_1065242Not Available586Open in IMG/M
3300015306|Ga0182180_1038037All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum697Open in IMG/M
3300015306|Ga0182180_1055963Not Available608Open in IMG/M
3300015309|Ga0182098_1066371All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum635Open in IMG/M
3300015310|Ga0182162_1048373All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum719Open in IMG/M
3300015311|Ga0182182_1046049Not Available709Open in IMG/M
3300015312|Ga0182168_1034885Not Available827Open in IMG/M
3300015312|Ga0182168_1136181Not Available503Open in IMG/M
3300015313|Ga0182164_1010169Not Available1207Open in IMG/M
3300015315|Ga0182120_1026509Not Available910Open in IMG/M
3300015315|Ga0182120_1094114Not Available587Open in IMG/M
3300015316|Ga0182121_1052255Not Available752Open in IMG/M
3300015317|Ga0182136_1129823All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum520Open in IMG/M
3300015319|Ga0182130_1088073Not Available594Open in IMG/M
3300015324|Ga0182134_1027928Not Available915Open in IMG/M
3300015325|Ga0182148_1034413Not Available840Open in IMG/M
3300015326|Ga0182166_1142483All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum506Open in IMG/M
3300015327|Ga0182114_1157885All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum508Open in IMG/M
3300015328|Ga0182153_1015751Not Available1095Open in IMG/M
3300015328|Ga0182153_1125027Not Available545Open in IMG/M
3300015331|Ga0182131_1060024Not Available727Open in IMG/M
3300015331|Ga0182131_1076907All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum665Open in IMG/M
3300015332|Ga0182117_1143060Not Available542Open in IMG/M
3300015332|Ga0182117_1143831All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum541Open in IMG/M
3300015333|Ga0182147_1144388Not Available538Open in IMG/M
3300015335|Ga0182116_1122412Not Available595Open in IMG/M
3300015336|Ga0182150_1146747Not Available530Open in IMG/M
3300015337|Ga0182151_1059370Not Available749Open in IMG/M
3300015337|Ga0182151_1104407Not Available608Open in IMG/M
3300015337|Ga0182151_1151502All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum523Open in IMG/M
3300015338|Ga0182137_1014899Not Available1253Open in IMG/M
3300015340|Ga0182133_1166705All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum535Open in IMG/M
3300015348|Ga0182115_1228998Not Available593Open in IMG/M
3300015349|Ga0182185_1208922All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum591Open in IMG/M
3300015349|Ga0182185_1281040Not Available508Open in IMG/M
3300015350|Ga0182163_1124773All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum793Open in IMG/M
3300015352|Ga0182169_1126680Not Available827Open in IMG/M
3300015352|Ga0182169_1140100Not Available787Open in IMG/M
3300015354|Ga0182167_1230595Not Available672Open in IMG/M
3300017412|Ga0182199_1127294Not Available607Open in IMG/M
3300017412|Ga0182199_1169406All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum543Open in IMG/M
3300017414|Ga0182195_1077796Not Available758Open in IMG/M
3300017421|Ga0182213_1123956Not Available721Open in IMG/M
3300017435|Ga0182194_1145662All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum514Open in IMG/M
3300017440|Ga0182214_1136437All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum539Open in IMG/M
3300017446|Ga0182217_1146203All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum556Open in IMG/M
3300017693|Ga0182216_1097228Not Available701Open in IMG/M
3300017693|Ga0182216_1143387Not Available602Open in IMG/M
3300020031|Ga0182119_102348All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum700Open in IMG/M
3300020223|Ga0182118_104834Not Available704Open in IMG/M
3300025900|Ga0207710_10596879All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum577Open in IMG/M
3300025903|Ga0207680_10506165Not Available860Open in IMG/M
3300025931|Ga0207644_11571630Not Available552Open in IMG/M
3300026088|Ga0207641_12303521Not Available538Open in IMG/M
3300028056|Ga0268330_1045762All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum564Open in IMG/M
3300028063|Ga0268350_1020915Not Available925Open in IMG/M
3300028141|Ga0268326_1001633Not Available939Open in IMG/M
3300028149|Ga0268353_108560All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum726Open in IMG/M
3300028251|Ga0268324_1023222Not Available524Open in IMG/M
3300028256|Ga0268304_1013886All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum524Open in IMG/M
3300028463|Ga0268325_103150All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum574Open in IMG/M
3300028464|Ga0268302_107764All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum529Open in IMG/M
3300028475|Ga0268327_1009569All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum688Open in IMG/M
3300028476|Ga0268329_1018927Not Available577Open in IMG/M
3300028527|Ga0268335_1009535Not Available617Open in IMG/M
3300032465|Ga0214493_1091362Not Available724Open in IMG/M
3300032502|Ga0214490_1129989All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum572Open in IMG/M
3300032548|Ga0214483_1086865Not Available508Open in IMG/M
3300032592|Ga0214504_1099273Not Available567Open in IMG/M
3300032791|Ga0314748_1011468Not Available1641Open in IMG/M
3300032875|Ga0314737_1034804All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum873Open in IMG/M
3300032915|Ga0314749_1127664Not Available542Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere63.39%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere9.82%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated8.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.89%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009976Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012949Switchgrass enrichment cultures co-assemblyEngineeredOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015293Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015324Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017446Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020031Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_31MAY2016_LD2 MGHost-AssociatedOpen in IMG/M
3300020223Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_31MAY2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028063Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028141Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028149Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028251Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028256Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028463Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028464Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028475Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028476Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028527Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032548Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032592Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032791Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032875Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032915Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070668_10068725013300005347Switchgrass RhizosphereITRSRMKKRQVKCLGKDIYTLSDPRESNEELSKVCFENLLKTPKLLDMRSRSDLIHEHSIPQLSKMAT*
Ga0070688_10142711213300005365Switchgrass RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0070667_10216732423300005367Switchgrass RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVSFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0070704_10083193313300005549Corn, Switchgrass And Miscanthus RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENVLKNPKLLDMGSRSDLIRDHSIPQLPKMA*
Ga0068858_10176321913300005842Switchgrass RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIHDHSIPQLPKMA*
Ga0105250_1052106513300009092Switchgrass RhizosphereQVKCLGEDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0105249_1073446213300009553Switchgrass RhizospherePSCTFSKDTCTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQGHSIPQLPKIV*
Ga0105249_1160797023300009553Switchgrass RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRCRSDLIQDHSIPQLPKMA*
Ga0105129_10612113300009975Switchgrass AssociatedMRKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0105128_10834913300009976Switchgrass AssociatedMKKRQVKCLGKDIYTLSDLRESNEELSKVYVENLLKNPKLLDMRSRSDLIQDPSIPQLPKMT*
Ga0105135_11386423300009980Switchgrass AssociatedMKKRQVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLQKMA*
Ga0105131_11110223300009989Switchgrass AssociatedMKERQVQCLGEDTYTLCDLRESNEELSKVYFENLLKIPKLLDMRSRSDLIQGHSIPQLPKIV*
Ga0105132_12138723300009990Switchgrass AssociatedMKKRQVKSLGEDTYTLSDPRESNEELSKVCFETLLKNPKLLDMRSRSDLIQYRSMPQLLKMA*
Ga0105132_13832423300009990Switchgrass AssociatedMKKRQVKCFGKDIYTLSDLRESNEELSKVYFENLFKNPKLLDMRSRSDLIHDHSIPQLPNMA*
Ga0105126_102857113300009994Switchgrass AssociatedIAITRSRMKKRQVKCLGKDTYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0105126_102909313300009994Switchgrass AssociatedMKKRQVKCLGKDIYTLSDLRESNVELSKVSFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMA*
Ga0105139_102561423300009995Switchgrass AssociatedMKRRQVKYLGKDIYTLSDWRESNEELSKVYFENLLKNPKLLNMRSRSDLIQYCSMPQLPKRA*
Ga0105139_105270523300009995Switchgrass AssociatedMKERQVKCLGEDIYILRDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQGHSIPQLPKIV*
Ga0134124_1176191513300010397Terrestrial SoilMKKRQVKCLGKDIYTLSDLRESNEELSKVYFQNLLKNPKLLDMRSRSDLIQYRFMPQLPKMA
Ga0134124_1216167813300010397Terrestrial SoilMAIIRSRVKKRQVKCLGKDTYTLSDLRESNEELSKVYFENLLKNPKLLDMRGRNDLIQDHSIRQLPKMA*
Ga0134124_1262531113300010397Terrestrial SoilMKKRQVKCLGKDIYTLSDLTESNEELSKVCFENLLKNPKLHDMRSRSDLIHDHSIPQLPKMA*
Ga0134122_1272339913300010400Terrestrial SoilMKKRQVKCLSEDRYTLSDMRESNEELSKVYFENLLKNPKLLDMRSRSDLIHHSIPQLPKMA*
Ga0134121_1273162613300010401Terrestrial SoilMKKRQVKCLGKDIYTLSDLTESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0153798_1022496623300012949Switchgrass DegradingMKKRQVKCLGKDIYTLSDMRESNEELSKVCFENLLKNPKILDMRSRSDLIQDHSIPQPPKIV*
Ga0157380_1322864913300014326Switchgrass RhizosphereKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMA*
Ga0157379_1210239513300014968Switchgrass RhizosphereMKKRQVKCLGKDTYTLSDPRESNEELSKVCFENLLKNPKLLEMRSRSYLIQYRSMPQLPKMA*
Ga0182183_101688413300015270Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELRKVCFENLMKNPKLLDMRSRSDLIRGHSIPQLPKTT*
Ga0182183_102336713300015270Switchgrass PhyllosphereMKRRQVKCLGEDINTLSDLRELNEELSKVYFENLLYNPRLHDMRSRSDLIQDYSMPQQPKMA*
Ga0182183_107266013300015270Switchgrass PhyllosphereMKKRQVKCLGEDRYTLSDLRESNEELSKVYFENLLKNPKLLDMTSRSDLIQYHSIPQLPKMA*
Ga0182102_101122723300015273Switchgrass PhyllosphereMKRRQVKCLGEDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSGSDLIQYRSMPQLPKMA*
Ga0182102_103426113300015273Switchgrass PhyllosphereMKRRQVKCLGKDTYTLRDPRESNEELSKVCFKNLLKNPKLFDMRRRSDLIRKHFITQLPKMT*
Ga0182099_102699713300015278Switchgrass PhyllosphereMKKRQVKCPGKDTYTLSDPRESNEELSKVCFKNLLKNPKLFDMRRRSDLIRKHSIPQLPKMA*
Ga0182099_106854713300015278Switchgrass PhyllosphereMKRRQVKCLGKDIYTLSDLRESNEGLSKVYFENLLKNPKLLDMRSRSDLIQDHSVPQLPKRA*
Ga0182100_108626213300015280Switchgrass PhyllosphereMKKRQAKCLGEDICTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQDHSMPQLPNMA*
Ga0182105_102766813300015290Switchgrass PhyllosphereMKKRQVKSLGEDTYTLSDPRESNEELSKVCFEKSLKNPKLLDMRSRSDLIQDHSVPQLPKRA*
Ga0182105_105943313300015290Switchgrass PhyllosphereVKKRQVKCLGEDIYTFSDMRESNEELSMVYFENLLKNPKSLDMRIRSDLIQDHSMPQLPKIV*
Ga0182103_100744613300015293Switchgrass PhyllosphereMKKRQVKCLGEDRYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA*
Ga0182103_103961323300015293Switchgrass PhyllosphereMKKRQVKCLGKDTYTLSDLGESNEELSKVCFENLFKNPKLLDMRSGSDLIQYRSMPQLPKMA*
Ga0182103_107648413300015293Switchgrass PhyllosphereMKERQVKCLGEDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMSQLPKMA*
Ga0182104_109642213300015297Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDPRESNEELSKVYFEKLLKNPKLLDMRSRSELVQYCFIPQLPK
Ga0182184_106524213300015301Switchgrass PhyllosphereTSSWLKKRQVKCLGKDMYPLSDLRDSNEELSKVYFENLLKNPKLLDMRRRSDLIQYRSMPQLPKMT*
Ga0182180_103803713300015306Switchgrass PhyllosphereMKKRQVKCLGEDRYTLSDLRESNEELSKVYFENLLKTPKLLDMGSRSDLIQDHSMPQLPKIV*
Ga0182180_105596313300015306Switchgrass PhyllosphereVKCLGEDTYTLCDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQDHSIPQPPKMV*
Ga0182098_106637113300015309Switchgrass PhyllosphereAPHIAITRSRMKKTQVKCLGKDIYTLSDMRESNEELSKVCFENLLKNPKLLDMRSRSDLNHDHSIPQLPKTP*
Ga0182162_104837313300015310Switchgrass PhyllosphereMKERQVKCLGEDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMA*
Ga0182182_104604913300015311Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLICDHSIPQLPKTA*
Ga0182168_103488523300015312Switchgrass PhyllosphereVKKRQVKCLGEDIYTLSDMRESNEELSMVYFENLLKNPKSLDMRIRSDLIQDHSIPQLPKMV*
Ga0182168_113618123300015312Switchgrass PhyllosphereMKERQVKCLVEDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSNLIQDHSIPQPPKMV*
Ga0182164_101016913300015313Switchgrass PhyllosphereLKKRQVKCLGEDRYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA*
Ga0182120_102650923300015315Switchgrass PhyllosphereMKKRQVKCLGKDTYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRGHSIPQLPKMAW*
Ga0182120_109411413300015315Switchgrass PhyllosphereVKKRQVKCLGEDIYTFSDMRESNEELSMVYFENLLKNPKSLDMRIRSDLIQDHSMPQLPKIV
Ga0182121_105225513300015316Switchgrass PhyllosphereMKKRQVKCLGKDIYTLNDPRESNEELSKVCFENLLKNPKLLDMRSISYLICDHSIPQLPKMA*
Ga0182136_112982313300015317Switchgrass PhyllosphereMKRRQVKCLGEDINTLSDLRELNEELSKVYFENLLYNPRLHDMRSRSDLIQDHSIPQLPKMV*
Ga0182130_108807323300015319Switchgrass PhyllosphereMKKRQVKCLGKDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSGSDLIQYRSMPQLPKMA*
Ga0182134_102792823300015324Switchgrass PhyllosphereLKKRQVKCLGKDMYPLSDLRDSNEELSKVYFENLLKNPKLLDIRSRSDLIQYHSMPQLPKMI*
Ga0182148_103441313300015325Switchgrass PhyllosphereMKRRQVKCLGKDTYTLRDPRESNEELSKVCFKNLLKNPKLFDMRRRSDLIRKHSIPQLPKMA*
Ga0182166_114248313300015326Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNDELSKVYFENLLKNPKLLDMRSRRVMFRDHSMHQLPKIV*
Ga0182114_115788513300015327Switchgrass PhyllosphereMKERQVKCHGEDIYTLSDLRESNEELSKVCFENLLKNPKLFDMRSRSDLIQDHSIPQLPKMAL*
Ga0182153_101575113300015328Switchgrass PhyllosphereMKRRQVKCLGEDIYTFSDMRESNEELSMVYFENLLKNPKSLDMRIRSDLIQDHSMPQLPKIV*
Ga0182153_112502713300015328Switchgrass PhyllosphereMKKRKVKCLGEDTYTLSDLRESNEELSKVYFEKLLKNLNLLDMRSRSDLIQGHSMPQLPKIV*
Ga0182131_106002413300015331Switchgrass PhyllosphereMKRRQVKCLGEDINTLSDMRELNEELSKVYFENLLYNPRLHDMRSRSDLIQDYSMPQPPK
Ga0182131_107690713300015331Switchgrass PhyllosphereTRSRMKKRQVKCLGKDIYTLSDLRESNEEISKVSFENLLKNPKLLDIRSRSDLIQYHSMPQLPKMV*
Ga0182117_114306013300015332Switchgrass PhyllosphereMKKRQVKYLGKDIYTLSDLRESNEELSKVSFENLLKNPKLLDMRSRSDLIHDHSIPQLPKMA*
Ga0182117_114383113300015332Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLTESNEELSKVCFENLLKNPKLLDMRRRSDLIQYRSMPQLPKMT*
Ga0182147_114438813300015333Switchgrass PhyllosphereMKKRQVKCLGEDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMT*
Ga0182116_112241213300015335Switchgrass PhyllosphereITRSRMKKRQVKCLGEDRYALSDLRESNEELSKVYFEKLLKNPKLLDMRSRSDLIQDHSIPQLPKMA*
Ga0182150_114674713300015336Switchgrass PhyllosphereKERQVKYLGEDIYTLSDMRESNEELIKVYFENLMKNPKVLDMRSRSDLIQDHSIP*
Ga0182151_105937023300015337Switchgrass PhyllosphereMKRRQVKCLGEDINTLSDLRELNEELSKVYFENLLYNHRLHDMRSRSDLIQDYSMPQQHKMA*
Ga0182151_110440723300015337Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSNLIQDHSIPQPPKMV*
Ga0182151_115150213300015337Switchgrass PhyllosphereMKRRQVKCLGKDTYTLRDLRESNEELSKVCFENLLKNSKLLDIRSRSDLIQYRSMPELPKMA*
Ga0182137_101489913300015338Switchgrass PhyllosphereMKERQVKCLGKDIYTLCDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQGHSIPQLPKIV*
Ga0182133_116670513300015340Switchgrass PhyllosphereMKKRQVKCLGKDTYTLSDPRESNEELSKVYFENLLKNPKLLDMRSRSDLIHGHSIPQLPKMA*
Ga0182115_122899823300015348Switchgrass PhyllosphereMKKRQVKSLGEDTYTLSDLRESNEELSKVCFETLLKNPKLLDMRSRSDLIQYRSMPQLLKMA*
Ga0182185_120892213300015349Switchgrass PhyllosphereKDIYTLSDLRESNEELSKVCFKNLLKNPKLFDMRRRSDLIRKHSIPQLPKMA*
Ga0182185_128104023300015349Switchgrass PhyllosphereMKKRQVKCFGKDTYTLSDLRESNEEPSKVCFENILKKPKLLDMRSRSDLIQDHSIPQLSK
Ga0182163_112477313300015350Switchgrass PhyllosphereMKKRQVKYLGKDIYTLSDLRESNEELSKVSFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA*
Ga0182169_112668013300015352Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDPRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPELPKMA*
Ga0182169_114010013300015352Switchgrass PhyllosphereMKRRQDKRLGKDIYTLSDLRESNEELSKDCFENLLKNPKLLDMRSRSDLIPDHSMPQLPKMVR*
Ga0182167_123059513300015354Switchgrass PhyllosphereMKRRQVKCLGEDINTLSDPRELNEELSKVYFENLLYNPRLHDMRSRSDLIQDYSMPQPPKMA*
Ga0182199_112729413300017412Switchgrass PhyllosphereMKKRQVKCLGEDRYALSDLRESNEELSKVYFEKLLKNPKLLDMRSRSDLIQDHSIPQLPKMT
Ga0182199_116940613300017412Switchgrass PhyllosphereMKRRQVKCLGKDTYTLSDPRESNEELSKVCFENLLKNPKLLDMRSRSDLIQGHSIPQLPKIV
Ga0182195_107779613300017414Switchgrass PhyllosphereMKKRQVKSLGEDTYTLSDPRESNEELSKVCFETLLKNPKLLDMRSRSDLIQYRSMPQLPKMA
Ga0182213_112395613300017421Switchgrass PhyllosphereMKERQVKCLGEDTYTLSDLRESNEEQSKVCFENLLKNPKLLYMRSRSDLILDHSIPQLPKMAL
Ga0182194_114566213300017435Switchgrass PhyllosphereMKKRQVKCLGEDRYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA
Ga0182214_113643713300017440Switchgrass PhyllosphereMKRRQVKCLGKDTYTLSDLRKSNEELSKVYFENLLKNPKLLDMRSISDLIRGHSIPQLPKMA
Ga0182217_114620313300017446Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEEISKVSFENLLKNPKLLYMRSRSDLIRDHSIPQLPKMA
Ga0182216_109722823300017693Switchgrass PhyllosphereMKKRKVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0182216_114338723300017693Switchgrass PhyllosphereVKRRLVKCLGKDINTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMT
Ga0182119_10234813300020031Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA
Ga0182118_10483413300020223Switchgrass PhyllosphereKCLGKDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0207710_1059687913300025900Switchgrass RhizosphereAIIRGRMKKRQAKCLGEDICTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0207680_1050616513300025903Switchgrass RhizosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0207644_1157163023300025931Switchgrass RhizosphereMKERQVKCLGEDTYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0207641_1230352113300026088Switchgrass RhizosphereLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268330_104576213300028056PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVSFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268350_102091523300028063PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIQYRSMPQLPKMA
Ga0268326_100163313300028141PhyllosphereKDIYTLSDLRESYEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268353_10856013300028149PhyllosphereKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268324_102322213300028251PhyllosphereMKKRQVKSLGEDTYTLSDLRESNEELSKVCFETLLKNPKLLDMRSRSDLIQYRSMPQLPKMA
Ga0268304_101388613300028256PhyllosphereMKKRKVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRRRSDLIRDHSIPQLPKMA
Ga0268325_10315013300028463PhyllospherePHIAITRSRMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268302_10776413300028464PhyllosphereITRSRMKKRQVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0268327_100956913300028475PhyllosphereHIAITRSRLKKRQVKCLGEDRYTLSDLRESNEELSKVYFENFLKNPKLLDMRSRSDLIQDHSIP
Ga0268329_101892713300028476PhyllosphereMKKRQVKFFGKDTYTLSDLRESNEEPSKVCFENILKKPKLLDMRSRSDLIQDHSIPQLSKII
Ga0268335_100953513300028527PhyllosphereMKKRQVKCLGKDTYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIQDHSIPQLPKMA
Ga0214493_109136223300032465Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0214490_112998913300032502Switchgrass PhyllosphereKERQVQCLGEDTYTLCDLRESNEELSKVCFENLLKNPKLLDMRSRSDLIRDHSIPQLLKM
Ga0214483_108686523300032548Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNEELSKISFENLLKNPKLLDMRSRSDLIHDHSIPQLPKMA
Ga0214504_109927313300032592Switchgrass PhyllosphereMKKRQVKCLGKDIYTLSDLRESNDELSKVSFENLLKNPKLLDMRGRSELIRDHSIPQLSKMA
Ga0314748_101146833300032791Switchgrass PhyllosphereMKKRQVKCLGKDTYTLSDLRESNEELSKVYFENLLKNPKLLDMRSRSDLIRDHSIPQLPKMA
Ga0314737_103480413300032875Switchgrass PhyllosphereVKCLGKDIYTLSDLRESNEELSKVCFENLLKNPKLLNMRSRSDLICDHSIPQLPKTA
Ga0314749_112766413300032915Switchgrass PhyllosphereIIRGRMKKRQTKCLGTDIYILSDLRESNEELSKVCFENLLKNLKLLDMRSRSDFIQDHFIPQLPKMA

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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