Metagenome Family F083736

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083736
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	44 residues
Representative Sequence	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Number of Associated Samples	20
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.81 %
% of genes near scaffold ends (potentially truncated)	75.00 %
% of genes from short scaffolds (< 2000 bps)	77.68 %
Associated GOLD sequencing projects	13
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.964 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (77.679 % of family members)
Environment Ontology (ENVO)	Unclassified (77.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.679 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00225	Kinesin	1.79
PF00787	PX	0.89
PF00075	RNase_H	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
All Organisms	root	All Organisms	8.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
cellular organisms	root	All Organisms → cellular organisms	5.36 %
Viruses	superkingdom	All Organisms → Viruses	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.68 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.68 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.79 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.68 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.79 %
Pyrenomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	0.89 %
Cryptomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales	0.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.68 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %
Geminigeraceae	family	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	0.89 %
Cryptomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales	0.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10835455	Not Available	524	Open in IMG/M
3300007516\|Ga0105050_10842073	Not Available	521	Open in IMG/M
3300007516\|Ga0105050_10899729	Not Available	500	Open in IMG/M
3300007519\|Ga0105055_10029031	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	6140	Open in IMG/M
3300007519\|Ga0105055_10047986	Not Available	4612	Open in IMG/M
3300007519\|Ga0105055_10140570	Not Available	2463	Open in IMG/M
3300007519\|Ga0105055_10170635	Not Available	2179	Open in IMG/M
3300007519\|Ga0105055_10334303	All Organisms → Viruses → Predicted Viral	1374	Open in IMG/M
3300007519\|Ga0105055_10384208	Not Available	1240	Open in IMG/M
3300007519\|Ga0105055_10538754	Not Available	962	Open in IMG/M
3300007519\|Ga0105055_10690128	Not Available	797	Open in IMG/M
3300007519\|Ga0105055_10740616	Not Available	756	Open in IMG/M
3300007519\|Ga0105055_10946230	Not Available	630	Open in IMG/M
3300007519\|Ga0105055_10956974	Not Available	625	Open in IMG/M
3300007519\|Ga0105055_11042127	Not Available	588	Open in IMG/M
3300007519\|Ga0105055_11138836	Not Available	552	Open in IMG/M
3300007519\|Ga0105055_11152525	Not Available	547	Open in IMG/M
3300007519\|Ga0105055_11175537	Not Available	539	Open in IMG/M
3300007520\|Ga0105054_10109533	Not Available	2815	Open in IMG/M
3300007520\|Ga0105054_10129592	Not Available	2544	Open in IMG/M
3300007520\|Ga0105054_10224030	Not Available	1785	Open in IMG/M
3300007520\|Ga0105054_10319372	Not Available	1389	Open in IMG/M
3300007520\|Ga0105054_10326151	Not Available	1368	Open in IMG/M
3300007520\|Ga0105054_10741033	Not Available	728	Open in IMG/M
3300007520\|Ga0105054_10824776	Not Available	671	Open in IMG/M
3300007520\|Ga0105054_10841180	Not Available	661	Open in IMG/M
3300007520\|Ga0105054_10923256	Not Available	617	Open in IMG/M
3300007520\|Ga0105054_10976938	Not Available	591	Open in IMG/M
3300007520\|Ga0105054_11033951	Not Available	568	Open in IMG/M
3300007520\|Ga0105054_11103656	Not Available	542	Open in IMG/M
3300007520\|Ga0105054_11120401	Not Available	536	Open in IMG/M
3300007520\|Ga0105054_11120697	Not Available	536	Open in IMG/M
3300007522\|Ga0105053_10007909	Not Available	14002	Open in IMG/M
3300007522\|Ga0105053_10083098	Not Available	3298	Open in IMG/M
3300007522\|Ga0105053_10324052	Not Available	1376	Open in IMG/M
3300007522\|Ga0105053_11098968	Not Available	546	Open in IMG/M
3300007522\|Ga0105053_11121351	Not Available	538	Open in IMG/M
3300007522\|Ga0105053_11129701	Not Available	535	Open in IMG/M
3300007522\|Ga0105053_11174613	Not Available	521	Open in IMG/M
3300007522\|Ga0105053_11224713	Not Available	505	Open in IMG/M
3300007523\|Ga0105052_10040042	Not Available	3392	Open in IMG/M
3300007523\|Ga0105052_10537019	Not Available	754	Open in IMG/M
3300007523\|Ga0105052_10916875	Not Available	547	Open in IMG/M
3300007523\|Ga0105052_10984428	Not Available	524	Open in IMG/M
3300007523\|Ga0105052_10997015	Not Available	520	Open in IMG/M
3300007722\|Ga0105051_11056669	Not Available	580	Open in IMG/M
3300007722\|Ga0105051_11299832	Not Available	514	Open in IMG/M
3300011188\|Ga0136587_1010065	Not Available	2327	Open in IMG/M
3300011188\|Ga0136587_1135133	Not Available	630	Open in IMG/M
3300011188\|Ga0136587_1193708	Not Available	531	Open in IMG/M
3300012032\|Ga0136554_1081156	Not Available	698	Open in IMG/M
3300012037\|Ga0136559_1017682	Not Available	1829	Open in IMG/M
3300012037\|Ga0136559_1055579	Not Available	1026	Open in IMG/M
3300012037\|Ga0136559_1101979	Not Available	768	Open in IMG/M
3300012037\|Ga0136559_1110561	Not Available	739	Open in IMG/M
3300012037\|Ga0136559_1202001	Not Available	555	Open in IMG/M
3300012037\|Ga0136559_1209871	Not Available	545	Open in IMG/M
3300012037\|Ga0136559_1219737	Not Available	533	Open in IMG/M
3300012037\|Ga0136559_1243826	Not Available	507	Open in IMG/M
3300012147\|Ga0136588_1042649	Not Available	759	Open in IMG/M
3300012147\|Ga0136588_1066475	Not Available	559	Open in IMG/M
3300012269\|Ga0136560_1039626	Not Available	1047	Open in IMG/M
3300012269\|Ga0136560_1091181	Not Available	548	Open in IMG/M
3300012272\|Ga0136586_1012756	Not Available	1911	Open in IMG/M
3300012272\|Ga0136586_1031505	Not Available	1197	Open in IMG/M
3300012272\|Ga0136586_1045709	Not Available	993	Open in IMG/M
3300012272\|Ga0136586_1126391	Not Available	618	Open in IMG/M
3300012272\|Ga0136586_1140311	Not Available	590	Open in IMG/M
3300012272\|Ga0136586_1186003	Not Available	520	Open in IMG/M
3300022865\|Ga0222668_1043555	Not Available	659	Open in IMG/M
3300027832\|Ga0209491_10050580	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	4167	Open in IMG/M
3300027832\|Ga0209491_10084053	Not Available	3069	Open in IMG/M
3300027832\|Ga0209491_10188834	All Organisms → Viruses → Predicted Viral	1788	Open in IMG/M
3300027832\|Ga0209491_10190866	Not Available	1774	Open in IMG/M
3300027832\|Ga0209491_10212927	Not Available	1635	Open in IMG/M
3300027832\|Ga0209491_10219677	Not Available	1597	Open in IMG/M
3300027832\|Ga0209491_10623119	Not Available	646	Open in IMG/M
3300027832\|Ga0209491_10769781	Not Available	526	Open in IMG/M
3300027848\|Ga0209390_10028639	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales	5717	Open in IMG/M
3300027848\|Ga0209390_10091699	Not Available	2901	Open in IMG/M
3300027848\|Ga0209390_10227701	Not Available	1566	Open in IMG/M
3300027848\|Ga0209390_10271067	Not Available	1368	Open in IMG/M
3300027848\|Ga0209390_10551705	Not Available	739	Open in IMG/M
3300027848\|Ga0209390_10653979	Not Available	630	Open in IMG/M
3300027848\|Ga0209390_10696135	Not Available	593	Open in IMG/M
3300027983\|Ga0209284_10243848	Not Available	922	Open in IMG/M
3300027983\|Ga0209284_10369843	Not Available	712	Open in IMG/M
3300028373\|Ga0306897_1021296	Not Available	1098	Open in IMG/M
3300028413\|Ga0306870_1071478	Not Available	624	Open in IMG/M
3300032435\|Ga0335398_10028560	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5824	Open in IMG/M
3300032435\|Ga0335398_10043163	Not Available	4616	Open in IMG/M
3300032435\|Ga0335398_10043944	All Organisms → cellular organisms → Bacteria	4571	Open in IMG/M
3300032435\|Ga0335398_10065262	Not Available	3670	Open in IMG/M
3300032435\|Ga0335398_10099424	Not Available	2867	Open in IMG/M
3300032435\|Ga0335398_10110503	Not Available	2691	Open in IMG/M
3300032435\|Ga0335398_10114746	Not Available	2629	Open in IMG/M
3300032435\|Ga0335398_10119703	Not Available	2561	Open in IMG/M
3300032435\|Ga0335398_10126315	All Organisms → cellular organisms → Eukaryota	2475	Open in IMG/M
3300032435\|Ga0335398_10247248	All Organisms → Viruses → Predicted Viral	1570	Open in IMG/M
3300032435\|Ga0335398_10412441	Not Available	1052	Open in IMG/M
3300032435\|Ga0335398_10468235	Not Available	944	Open in IMG/M
3300032435\|Ga0335398_10495705	Not Available	897	Open in IMG/M
3300032435\|Ga0335398_10537743	Not Available	833	Open in IMG/M
3300032435\|Ga0335398_10608155	Not Available	743	Open in IMG/M
3300032435\|Ga0335398_10797996	Not Available	578	Open in IMG/M
3300032435\|Ga0335398_10860922	Not Available	539	Open in IMG/M
3300032462\|Ga0335396_10066130	Not Available	2399	Open in IMG/M
3300032462\|Ga0335396_10273922	Not Available	1102	Open in IMG/M
3300032462\|Ga0335396_10488570	Not Available	782	Open in IMG/M
3300032462\|Ga0335396_10517889	Not Available	754	Open in IMG/M
3300032462\|Ga0335396_10933747	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.68%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	22.32%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	77.68%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	22.32%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	77.68%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	22.32%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	77.68%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	21.43%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012032	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #431	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012147	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #564	Environmental	Open in IMG/M
3300012269	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #497	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300022865	Saline water microbial communities from Ace Lake, Antarctica - #728	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028373	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_108354551	3300007516	Freshwater	VGFVSACSWLALVTGVGGYVLAGVEIRVLSVYFSYFAGVRVVGVC
Ga0105050_108420732	3300007516	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC*
Ga0105050_108997291	3300007516	Freshwater	EVGFVSACSWLALVTGVGGYVLSGVEIGVLSGMFLCFFGC*
Ga0105055_100290318	3300007519	Freshwater	GFVSACSWFALVSGVGGCVLAEVEIGVLSCIFLYFCGC*
Ga0105055_100479869	3300007519	Freshwater	FLTLACVCMGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFL*
Ga0105055_101405701	3300007519	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAEVEIGVLSCIFLCFCGC*
Ga0105055_101706354	3300007519	Freshwater	MRVCGGAKLEVGFVSACSWLALVSGVGGCVLAEVEIEILSFILLYFCGC*
Ga0105055_103343031	3300007519	Freshwater	CVRGGGLEVGFVSACSWLALVTGVGGYVLTGLEIGVLSCICPYVCGC*
Ga0105055_103842082	3300007519	Freshwater	RNVCVGGLEVGFVSACSWLALVTGVGGYVLAEVEIGVLCCIFFYFCGY*
Ga0105055_105387542	3300007519	Freshwater	VCEAGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC*
Ga0105055_106901281	3300007519	Freshwater	VGFVSACSWLALVSGVGGCVLVEVEIGGLSCIFLYFCGC*
Ga0105055_107406161	3300007519	Freshwater	CVGGLEMGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCRC*
Ga0105055_109462301	3300007519	Freshwater	VGGLEVGFVSACSWLALVSGVGGCVLVEVEIGVLSCIVLYFCGC*
Ga0105055_109569741	3300007519	Freshwater	VGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFFGC*
Ga0105055_110421271	3300007519	Freshwater	MGELEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCI
Ga0105055_111388362	3300007519	Freshwater	GLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC*
Ga0105055_111525251	3300007519	Freshwater	VGGLEVGFFPACSWLALVAGVGGYILAGVEIGVLSCIFLYFCG
Ga0105055_111755371	3300007519	Freshwater	VCVGGLEVGFVSACSWLALVSGVGGCVLAEVEIEVLSCIFLYFCGC*
Ga0105054_101095332	3300007520	Freshwater	MCVGGLEVGVLLACSWVALVAGVGGYFLAGVEIGVLSCIIFYFCGC*
Ga0105054_101295921	3300007520	Freshwater	GGLEVGFVSACSWLALVTGVGGYVLTGLEIGVLSCICPYVCGC*
Ga0105054_102240301	3300007520	Freshwater	FVSACSWLALVTGVGGCVLAEVEIGVLSCIFLYFCGC*
Ga0105054_103193723	3300007520	Freshwater	LEAGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC*
Ga0105054_103261514	3300007520	Freshwater	GGLEVGFVSACSWLSLVTGVGGYVLAGVEIGVLFCIFLYLCGC*
Ga0105054_107410331	3300007520	Freshwater	VCEGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC*
Ga0105054_108247762	3300007520	Freshwater	VCVGGLEVGFVSSCSWLALVTDVGDYVLAGVEIGGLSCIFLYFCGC*
Ga0105054_108411801	3300007520	Freshwater	ACVCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVMSCIFSIFCGC*
Ga0105054_109232561	3300007520	Freshwater	VFVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCLFLYFCGC*
Ga0105054_109769383	3300007520	Freshwater	WVGGLEVGFVSACSWLALVTGVGGYVLAGSEIGVLSCIFLYFFGC*
Ga0105054_110339511	3300007520	Freshwater	LKRISCGGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCG
Ga0105054_111036561	3300007520	Freshwater	VGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCG
Ga0105054_111204011	3300007520	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLAC
Ga0105054_111206971	3300007520	Freshwater	VGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCKFFYCCGC*
Ga0105053_100079091	3300007522	Freshwater	EVGFVSACSWLALVSGVGGCVLAEVEIGVLSCIFLYLGGC*
Ga0105053_100830981	3300007522	Freshwater	VCVGGLEVGVLLACSWVALVAGVGGYFLAGVEIGVLSCIIFYFCGC*
Ga0105053_103240522	3300007522	Freshwater	CVCGGGLEVGFFSACSWLALVAGVGGYVLAGVEIGVLSCIFLYFGGC*
Ga0105053_110989681	3300007522	Freshwater	MRVCGGGLEVGFVSACSWLALVSGVGGCVLAEVEIGVLSCIFL
Ga0105053_111213511	3300007522	Freshwater	EVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLHFCGY*
Ga0105053_111297011	3300007522	Freshwater	VGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0105053_111746131	3300007522	Freshwater	VCVGGLEVWFVSACSWLALVTGVRGYVLAGVEIGVLSCIFLYFCGC
Ga0105053_112247131	3300007522	Freshwater	MRVCEGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYF
Ga0105052_100400424	3300007523	Freshwater	VGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC*
Ga0105052_105370192	3300007523	Freshwater	GGLEVGFVSACSWLALVTGVGGYVLAGVEMQVLSCIFLHFCGC*
Ga0105052_109168751	3300007523	Freshwater	VEGLEVGFVSVCSWLALVTGVGGYVLAEVEIGVLSCIF
Ga0105052_109844282	3300007523	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLCFCGC*
Ga0105052_109970152	3300007523	Freshwater	CVCVGGLEVGFVSACSWLALVSGVGGCVLAEVEIGVLSCIFFYFCGC*
Ga0105051_108877931	3300007722	Freshwater	MCVGVLEVGFVSACSWVALVSGVGGCVLAEVEIGVLLCIFFSIFAGVKVG
Ga0105051_110566691	3300007722	Freshwater	FLTLACVCVGRLEVGLILACSWLALVAGVGGYVLAGVEIGVLSCIFLYFCGC*
Ga0105051_112998321	3300007722	Freshwater	CVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGGLSCIFLCFCGC*
Ga0136587_10100651	3300011188	Saline Lake	VDFFPACSSLALVAGVGGYVLAGVEIGVWSRIFLYFCGC*
Ga0136587_11351331	3300011188	Saline Lake	VGELEVGFVSACSWLALVTGVGGYVLAGVETGVLSCIFLYF
Ga0136587_11937082	3300011188	Saline Lake	VSACSWLALVSGVGGCVLVEVEIGVLSCIFLYFCGC*
Ga0136554_10811561	3300012032	Saline Lake	VGGLEVGFVSACSWLALGAGVGGYILAGVEIGVLS
Ga0136559_10176824	3300012037	Saline Lake	VCVEGLEVDFFPACSSLALVAGVGGYVLAGVEIGVWSRIFLYFCGC*
Ga0136559_10555792	3300012037	Saline Lake	VGGLEVGFVSACSWLALVTGVGGHVLSGVEIGVLSCIFLYFCEC*
Ga0136559_11019791	3300012037	Saline Lake	ACSWLALVSGVGGCVLVKVEIGVLSCIFLYFCGC*
Ga0136559_11105611	3300012037	Saline Lake	LEAGFVSAGSWLALVTGVGGYVLAEVEIGVLSCIFLYFCGC
Ga0136559_12020011	3300012037	Saline Lake	HLHACVGGLEVGFVSACSWLALVTGVGGFVLAGVEIGVLSCICLYFCGC*
Ga0136559_12098711	3300012037	Saline Lake	MPSFVCGGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIF
Ga0136559_12197371	3300012037	Saline Lake	HLHACGGGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCRC*
Ga0136559_12438261	3300012037	Saline Lake	VCVGGLEVGFVSACSWLALVSGVGGCVLVEVEIGVLSCIFLYFCGC*
Ga0136588_10426492	3300012147	Saline Lake	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVMSCIFLYFCGC*
Ga0136588_10664751	3300012147	Saline Lake	VGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFFGC*
Ga0136560_10396261	3300012269	Saline Lake	VCGGGLEVGFVSACSWLALVTGVGGYVLAGVEIRVLSCIFFHFCGC*
Ga0136560_10911813	3300012269	Saline Lake	LEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCMFLYFCWC*
Ga0136586_10127561	3300012272	Saline Lake	LACVCGGGLEVGFVSACSWLALVAGVGGYVLAGVEIGVLSCIFLYFCGY*
Ga0136586_10315052	3300012272	Saline Lake	GGLEVGFVSACSWLALVTGVGGYVLAGVEIRVLSCIFLYFCGC*
Ga0136586_10457093	3300012272	Saline Lake	VCGGGLEAGFVSAGSWLALVTGVGGYVLAGVEIGVLSCIIFYFCGC*
Ga0136586_11263911	3300012272	Saline Lake	VGFFPACSWLALVAGVRGYVLAGVEIGVLSCIFLYFCGC
Ga0136586_11403111	3300012272	Saline Lake	VGGLEVGFFPACSWLALVAGVGGYILAGVEIGVLSCIF
Ga0136586_11860031	3300012272	Saline Lake	ACVCVGGLEVEFVSACSWLALVTGVGGYVLAGVEIGVLACTFLYFCGC*
Ga0222668_10435551	3300022865	Saline Water	VCVGGLEVGFVSACSWLALVSGVGGCVLAEVEMGVLSCIFLYFCGC
Ga0209491_100505801	3300027832	Freshwater	FLTLACVCGGGLEEGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFFGC
Ga0209491_100840536	3300027832	Freshwater	VCVGGLEVGVLLACSWVALVAGVGGYFLAGVEIGVLSCIIFYFCGC
Ga0209491_101888345	3300027832	Freshwater	GFVSACSWLALVTGVGGCVLAEVEIGVLSCIFLYFCGC
Ga0209491_101908661	3300027832	Freshwater	GGLEVGFVSACSWLALVSGVGGCVLAEAEIGVLSCIFLYFCGC
Ga0209491_102129271	3300027832	Freshwater	WYLVFFLACSWLALVAGVGGYVLAGVEIEVLSRIFFYVCRV
Ga0209491_102196771	3300027832	Freshwater	VSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0209491_106231191	3300027832	Freshwater	VLVPCVCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLAC
Ga0209491_107697812	3300027832	Freshwater	EVGFVSACSWLALVSGVGGCVLADVEIGVLSCIFLYFCGC
Ga0209390_100286391	3300027848	Freshwater	MRVCGGAKLEVGFVSACSWLALVSGVGGCVLAEVEIEILSFILLYFCGC
Ga0209390_100916994	3300027848	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0209390_102277013	3300027848	Freshwater	CVCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLHFCGC
Ga0209390_102710671	3300027848	Freshwater	FLTFACVCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLCCMFVYFCGC
Ga0209390_105517051	3300027848	Freshwater	EVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0209390_106539792	3300027848	Freshwater	MVCVGGLEVGFVSACSWLALVSGVGGCVLAEVEIGVLSCIFLY
Ga0209390_106961351	3300027848	Freshwater	CVGGLEVGFVPACSWLALVTGVGGYVLAGVEIGVLSCIFFYFCGC
Ga0209284_102438481	3300027983	Freshwater	MPRLRTTSTCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGGLPCI
Ga0209284_103698431	3300027983	Freshwater	VSGGGLEVGFVPACSWLALVNGVGGYVLAGVEIGVLSCIYLYFCGC
Ga0306897_10212962	3300028373	Saline Lake	VCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGDLSCIFLYFCGC
Ga0306870_10714782	3300028413	Saline Lake	VSACSWLALVTGVGGYVLAGVEIGALSCIFLYFCGC
Ga0335398_100285608	3300032435	Freshwater	TLACVCVGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFFGC
Ga0335398_100431631	3300032435	Freshwater	RCFLTLACVCMGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFL
Ga0335398_100439447	3300032435	Freshwater	MGFVSACSWLALVTDVRGYVLARVEIRVLSCIFLYFCGC
Ga0335398_100652626	3300032435	Freshwater	CVGGLEVGFVSACSWLALVTGVGGYVLARVEIGVLSCIFLYFCGC
Ga0335398_100994242	3300032435	Freshwater	VCEAGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC
Ga0335398_101105036	3300032435	Freshwater	GGLEVGFVSACSWLALVSGVGGCVLVEVEIGVLSCIFLYFYGC
Ga0335398_101147462	3300032435	Freshwater	VCVGGLEVGFFPACSWWALVAGVGGYVLAEVEIGVLSCIFLYFCRC
Ga0335398_101197035	3300032435	Freshwater	EVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFFGC
Ga0335398_101263151	3300032435	Freshwater	VGFVSACSWLALVPGVGGYVLAGVEIGVLSCIFLY
Ga0335398_102472482	3300032435	Freshwater	VCGGGLEVWFVSACQWLALVAGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0335398_104124412	3300032435	Freshwater	CVGGLEVGFVSACSWLALVTDVGGYVLAGVEIGGLSCIFLYFCGC
Ga0335398_104682352	3300032435	Freshwater	VCVGGLEVGFVSACSWLALVSGVGGFVLAEVEIGVLSCIFLYFCGF
Ga0335398_104957051	3300032435	Freshwater	ACVCGGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFSGC
Ga0335398_105377431	3300032435	Freshwater	MPVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFC
Ga0335398_106081551	3300032435	Freshwater	CVCVGGLEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCLFLYFCGC
Ga0335398_107979961	3300032435	Freshwater	VCGGGLEVGFVSACSWLALVSGVGGFVMAGVEIGVLSCIFLYFCGC
Ga0335398_108609221	3300032435	Freshwater	VCVGGLEVGFVSACSWLALVSGVGGCVLAEVEIGVLSCIFLYFCGC
Ga0335396_100661305	3300032462	Freshwater	VGYVSACSWLALVTGVGGYVLAGVEIGVLSCIFLY
Ga0335396_102739221	3300032462	Freshwater	VCVGGLEVGFVSACSWLALVTGVGGYVLAGLEIGVLSCIFLYFCGC
Ga0335396_104885701	3300032462	Freshwater	LEVGFVSACSWLALVTGVGGYVLAGVEIGVLSCIFLYFCGC
Ga0335396_105178891	3300032462	Freshwater	HRCFLTLACVCGGGLEVGFVSACSWLALVAGVGGYVLAGVEIGVLSCIFLYFCGY
Ga0335396_109337471	3300032462	Freshwater	VGVFPACSWLALVAGVGDYALAGVEIGDFSCIFLY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083736

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences