Metagenome Family F083762

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083762
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	57 residues
Representative Sequence	MSAKRIKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLKATFTYKVSLGVGAMAKK
Number of Associated Samples	60
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.51 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (70.536 % of family members)
Environment Ontology (ENVO)	Unclassified (61.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.536 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.28% β-sheet: 22.09% Coil/Unstructured: 61.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01740	STAS	9.82
PF07238	PilZ	8.93
PF00072	Response_reg	6.25
PF13650	Asp_protease_2	3.57
PF01381	HTH_3	2.68
PF00795	CN_hydrolase	1.79
PF13683	rve_3	1.79
PF12844	HTH_19	1.79
PF02627	CMD	0.89
PF08239	SH3_3	0.89
PF01569	PAP2	0.89
PF08388	GIIM	0.89
PF13377	Peripla_BP_3	0.89
PF13517	FG-GAP_3	0.89
PF00664	ABC_membrane	0.89
PF02517	Rce1-like	0.89
PF03852	Vsr	0.89
PF14534	DUF4440	0.89
PF04326	AlbA_2	0.89
PF07730	HisKA_3	0.89
PF12867	DinB_2	0.89
PF07366	SnoaL	0.89
PF13365	Trypsin_2	0.89
PF06114	Peptidase_M78	0.89
PF13083	KH_4	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.89
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.89
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.89
COG3727	G:T-mismatch repair DNA endonuclease Vsr, very short patch repair protein	Replication, recombination and repair [L]	0.89
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.89
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.89
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.89
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.89
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.04 %
Unclassified	root	N/A	41.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.04 %
Unclassified	root	N/A	41.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	41.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.79 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.89 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.89 %
Halococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
unclassified Gemmataceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae	0.89 %
Halococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Halococcus sediminicola	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus sediminicola	0.89 %
Gemmataceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10063607	Not Available	942	Open in IMG/M
3300001593\|JGI12635J15846_10105248	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300002906\|JGI25614J43888_10019750	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300002906\|JGI25614J43888_10093880	Not Available	806	Open in IMG/M
3300002914\|JGI25617J43924_10024706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2104	Open in IMG/M
3300002914\|JGI25617J43924_10035534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1788	Open in IMG/M
3300002914\|JGI25617J43924_10053643	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300002917\|JGI25616J43925_10153794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300002917\|JGI25616J43925_10221944	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300004092\|Ga0062389_101697487	Not Available	813	Open in IMG/M
3300007255\|Ga0099791_10591739	Not Available	542	Open in IMG/M
3300007258\|Ga0099793_10299748	Not Available	781	Open in IMG/M
3300007265\|Ga0099794_10050657	Not Available	1998	Open in IMG/M
3300007265\|Ga0099794_10096159	Not Available	1474	Open in IMG/M
3300007265\|Ga0099794_10207976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300007265\|Ga0099794_10458001	Not Available	669	Open in IMG/M
3300007265\|Ga0099794_10477506	Not Available	655	Open in IMG/M
3300007265\|Ga0099794_10663605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	554	Open in IMG/M
3300007788\|Ga0099795_10001278	All Organisms → cellular organisms → Bacteria	5351	Open in IMG/M
3300009038\|Ga0099829_10040704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3382	Open in IMG/M
3300009038\|Ga0099829_10295657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300009088\|Ga0099830_10018424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4491	Open in IMG/M
3300009088\|Ga0099830_10066105	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300009088\|Ga0099830_10218472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1498	Open in IMG/M
3300009088\|Ga0099830_10982766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300009088\|Ga0099830_11456914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300009089\|Ga0099828_10578775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300009089\|Ga0099828_10904990	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009143\|Ga0099792_10579139	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300009143\|Ga0099792_10969470	Not Available	566	Open in IMG/M
3300010379\|Ga0136449_100428671	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300011269\|Ga0137392_10560287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300011269\|Ga0137392_11100261	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300011269\|Ga0137392_11542230	Not Available	523	Open in IMG/M
3300011270\|Ga0137391_10046945	All Organisms → cellular organisms → Bacteria	3676	Open in IMG/M
3300011270\|Ga0137391_11397146	Not Available	546	Open in IMG/M
3300011271\|Ga0137393_10941263	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300011271\|Ga0137393_11064891	Not Available	687	Open in IMG/M
3300012096\|Ga0137389_10341063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300012096\|Ga0137389_10369933	Not Available	1222	Open in IMG/M
3300012096\|Ga0137389_10505711	Not Available	1036	Open in IMG/M
3300012096\|Ga0137389_11084945	Not Available	686	Open in IMG/M
3300012189\|Ga0137388_10025452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4527	Open in IMG/M
3300012189\|Ga0137388_10418640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300012189\|Ga0137388_10525319	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012189\|Ga0137388_10995699	Not Available	773	Open in IMG/M
3300012189\|Ga0137388_11206362	Not Available	694	Open in IMG/M
3300012202\|Ga0137363_10067166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2626	Open in IMG/M
3300012202\|Ga0137363_10247567	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300012202\|Ga0137363_11477420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012203\|Ga0137399_10492949	Not Available	1027	Open in IMG/M
3300012203\|Ga0137399_11152157	Not Available	653	Open in IMG/M
3300012361\|Ga0137360_11452219	Not Available	590	Open in IMG/M
3300012683\|Ga0137398_10551858	Not Available	795	Open in IMG/M
3300012683\|Ga0137398_10747321	Not Available	681	Open in IMG/M
3300012685\|Ga0137397_10000852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21073	Open in IMG/M
3300012918\|Ga0137396_10171809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300012918\|Ga0137396_10276654	Not Available	1240	Open in IMG/M
3300012918\|Ga0137396_10824897	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300012922\|Ga0137394_10073980	All Organisms → cellular organisms → Bacteria → Acidobacteria	2843	Open in IMG/M
3300012922\|Ga0137394_11193905	Not Available	625	Open in IMG/M
3300012923\|Ga0137359_10022250	All Organisms → cellular organisms → Bacteria	5392	Open in IMG/M
3300012923\|Ga0137359_10048940	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300012923\|Ga0137359_10121585	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300012923\|Ga0137359_10275879	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300012925\|Ga0137419_10036916	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300012927\|Ga0137416_10238506	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300012929\|Ga0137404_11314514	Not Available	667	Open in IMG/M
3300012929\|Ga0137404_11776227	Not Available	573	Open in IMG/M
3300012929\|Ga0137404_12312848	Not Available	503	Open in IMG/M
3300012944\|Ga0137410_10000609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24852	Open in IMG/M
3300015053\|Ga0137405_1410728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4144	Open in IMG/M
3300015241\|Ga0137418_10000482	All Organisms → cellular organisms → Bacteria	35506	Open in IMG/M
3300017931\|Ga0187877_1356190	Not Available	555	Open in IMG/M
3300017955\|Ga0187817_10130060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300020140\|Ga0179590_1142904	Not Available	653	Open in IMG/M
3300020199\|Ga0179592_10037429	Not Available	2196	Open in IMG/M
3300020199\|Ga0179592_10084926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300020199\|Ga0179592_10437902	Not Available	566	Open in IMG/M
3300021046\|Ga0215015_10979914	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus sediminicola	571	Open in IMG/M
3300021088\|Ga0210404_10053430	Not Available	1909	Open in IMG/M
3300021088\|Ga0210404_10198241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300021170\|Ga0210400_10360491	Not Available	1197	Open in IMG/M
3300021404\|Ga0210389_11159357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	596	Open in IMG/M
3300026285\|Ga0209438_1211472	Not Available	520	Open in IMG/M
3300026319\|Ga0209647_1004587	All Organisms → cellular organisms → Bacteria	10342	Open in IMG/M
3300026359\|Ga0257163_1005459	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	1824	Open in IMG/M
3300026499\|Ga0257181_1085446	Not Available	550	Open in IMG/M
3300026551\|Ga0209648_10001595	All Organisms → cellular organisms → Bacteria	18415	Open in IMG/M
3300026551\|Ga0209648_10063045	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300026551\|Ga0209648_10397575	Not Available	907	Open in IMG/M
3300027512\|Ga0209179_1004039	All Organisms → cellular organisms → Bacteria → Acidobacteria	2179	Open in IMG/M
3300027537\|Ga0209419_1007961	Not Available	1732	Open in IMG/M
3300027537\|Ga0209419_1058575	Not Available	752	Open in IMG/M
3300027591\|Ga0209733_1052925	Not Available	1072	Open in IMG/M
3300027671\|Ga0209588_1105244	Not Available	907	Open in IMG/M
3300027783\|Ga0209448_10298470	Not Available	528	Open in IMG/M
3300027846\|Ga0209180_10090089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1740	Open in IMG/M
3300027846\|Ga0209180_10293832	Not Available	932	Open in IMG/M
3300027846\|Ga0209180_10722523	Not Available	540	Open in IMG/M
3300027862\|Ga0209701_10061718	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300027862\|Ga0209701_10298596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300027862\|Ga0209701_10511177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027903\|Ga0209488_10040189	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300028047\|Ga0209526_10002107	All Organisms → cellular organisms → Bacteria	13404	Open in IMG/M
3300028536\|Ga0137415_10013178	All Organisms → cellular organisms → Bacteria	8195	Open in IMG/M
3300028536\|Ga0137415_10080737	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300028536\|Ga0137415_11264718	Not Available	555	Open in IMG/M
3300031823\|Ga0307478_10158263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1802	Open in IMG/M
3300031962\|Ga0307479_11716835	Not Available	581	Open in IMG/M
3300032160\|Ga0311301_10377317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Freshwater	Environmental → Aquatic → Freshwater	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.96%
Loam	Environmental → Terrestrial → Soil → Loam	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	73.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	70.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100636073	3300000597	Forest Soil	MSAKRTKGRWVVYERREGVFIPLSRRFTTRANAEKEHDPMQALFKYKQVSLGVGVVAKE*
JGI12635J15846_101052481	3300001593	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK*
JGI25614J43888_100197503	3300002906	Grasslands Soil	MSAKRTKGRWVVCEHRKGEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE*
JGI25614J43888_100938802	3300002906	Grasslands Soil	MSAKRTKGRWVVYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
JGI25617J43924_100247062	3300002914	Grasslands Soil	MSAKRTNGRWVVYEXRNGEFIRLSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKG*
JGI25617J43924_100355341	3300002914	Grasslands Soil	MSKRANARWVVYEHRNGEFLFVSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKE*
JGI25617J43924_100536432	3300002914	Grasslands Soil	MTLSMSANRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLKAMFTYKRVSLGVGVVTE*
JGI25616J43925_101537942	3300002917	Grasslands Soil	MSAKRMTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
JGI25616J43925_102219442	3300002917	Grasslands Soil	MVVYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
Ga0062389_1016974872	3300004092	Bog Forest Soil	MSKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKEREKLKAPFTYKRVSLGVGFVVKV*
Ga0099791_105917392	3300007255	Vadose Zone Soil	MSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK*
Ga0099793_102997482	3300007258	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAEKERDKLKGTFTYKVSLGVGAIAKK*
Ga0099794_100506574	3300007265	Vadose Zone Soil	VYERRKGEFIRLSRLFTTRAQAEKECDKLEARFTYKKVSLGVGIVAKD*
Ga0099794_100961594	3300007265	Vadose Zone Soil	FRYAITLPMSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK*
Ga0099794_102079761	3300007265	Vadose Zone Soil	ANDGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLEAAFTYKKVSLGVGIVKE*
Ga0099794_104580011	3300007265	Vadose Zone Soil	MTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
Ga0099794_104775063	3300007265	Vadose Zone Soil	TLLTVGSYAITLAMSAKRMNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0099794_106636052	3300007265	Vadose Zone Soil	LPMSAKRTKGRWVVCEHRKGEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE
Ga0099795_1000127811	3300007788	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0099829_100407042	3300009038	Vadose Zone Soil	MSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG*
Ga0099829_102956573	3300009038	Vadose Zone Soil	MSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLEATFTYKKVSFGVGVVAKV*
Ga0099830_100184247	3300009088	Vadose Zone Soil	MSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLEATFTYKKISFGVGVVAKV*
Ga0099830_100661054	3300009088	Vadose Zone Soil	ASTNAITLSMSAKRTKGQWVVYEHREGEFVSRSKLYTTRARAQKERDKLEAGLISKQVSLGVGIVAKE*
Ga0099830_102184721	3300009088	Vadose Zone Soil	MSAKRTKGRWVVYEQRKGEFIFLSRLFTTRAQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0099830_109827662	3300009088	Vadose Zone Soil	MKGQCVVYERRNGEFICLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVAN
Ga0099830_113748911	3300009088	Vadose Zone Soil	RLSRLFTTKAQAEKEREKREKLATFTFKKKASLGVGVVAKE*
Ga0099830_114569141	3300009088	Vadose Zone Soil	SAKRTKARWVVYEHRKGKFIRLSRPFTTRAQAEKERDKLEARFTCKKVSFGVGIVKG*
Ga0099828_105787752	3300009089	Vadose Zone Soil	MSAKRTKRWVVYERRDGEFVFLSRLFTTRAQAEKERDKLKASFKPRLASLGVGVVAKE*
Ga0099828_109049902	3300009089	Vadose Zone Soil	AITLPMYAKRTKGRWFLYERRKGEFIRLSRLFTTRVEAEKERDRLEAAFTYKKVSFGVGLVSSSGS*
Ga0099792_105791392	3300009143	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSL
Ga0099792_109694701	3300009143	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0136449_1004286713	3300010379	Peatlands Soil	MCAKRTNGRWVVYERRNGEFIFLSRLLATRAQAEKERNKLKASFKSKRVSLGVGFVVKG*
Ga0137392_105602871	3300011269	Vadose Zone Soil	WVVYERREGKFIFLSRPLATRALAEKERDKLKASKSKWVSLGIGVVTWRKGRQQ*
Ga0137392_111002611	3300011269	Vadose Zone Soil	AFISHNCLSVSPMSAKRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLEAAFTYKKVSFGVGLVSSSGS*
Ga0137392_115422302	3300011269	Vadose Zone Soil	WVVYERRNGEFVFLSRLFTTRAQAEKERDKLKASFKPRLASLGVGVVAKE*
Ga0137391_100469451	3300011270	Vadose Zone Soil	VIYERRNGEFIFLSRLFTTRAQAEKERDERQAAFKSKKVSLGVGVVVKG*
Ga0137391_113971461	3300011270	Vadose Zone Soil	PRRTKRRWVVYERLRGKFILRSRLFITRAQAEKERGRLQAAFTSKQVSLGVGVVLEE*
Ga0137393_109412632	3300011271	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAIA
Ga0137393_110648913	3300011271	Vadose Zone Soil	RRVVYGRGDGEFIFLSRLFTARAQREKDRDKLEGTFMYKVSLGVGAIAKK*
Ga0137389_103410633	3300012096	Vadose Zone Soil	AKRTKGRWVVYEQRKGEFIFLSRLFTTRAQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0137389_103699333	3300012096	Vadose Zone Soil	LDTSAKRTKRRWVVYERREGEFVFLSRLLTMRAQAEEERDKLKASFKSRRVSLGVGVVLKLR*
Ga0137389_105057114	3300012096	Vadose Zone Soil	MSKRTKRRWIVYEHRNGEFIRLSRLFTTKAQAEKEREKREKLTAFTFKKKASLGVGVVKE
Ga0137389_110849451	3300012096	Vadose Zone Soil	MSKRTKLRWVLYELRDGEFIRLSRLFTTRAQAEKERERREKLKATFRFKKASLGVGVVVRE*
Ga0137388_100254528	3300012189	Vadose Zone Soil	MSAKRTRGRWVVYERRNGEFVFLSWLFTTRAQAEKERDKLKTSFKSRLASLGVGFVAKE
Ga0137388_104186401	3300012189	Vadose Zone Soil	TLPMSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0137388_105253191	3300012189	Vadose Zone Soil	MSAKRTKRWVVYERRNGEFVFLSRLFTTRAQAEKERDKLKTSFKSRLASLGVGFVAKE*
Ga0137388_109956992	3300012189	Vadose Zone Soil	MSAKRTKRWVVYERRDGEFIFLSRLFTTRAQAEKERDKLRASSKSRLASLGVGVVLKEVR
Ga0137388_112063622	3300012189	Vadose Zone Soil	VYERRDGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAIAKK*
Ga0137363_100671663	3300012202	Vadose Zone Soil	MSVKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG*
Ga0137363_102475672	3300012202	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAEKERDKLKATFTYKVSLGVGAIAKK*
Ga0137363_114774201	3300012202	Vadose Zone Soil	MSAKRTKGRWVVYEHRNGEFIPLSRLFTTRAQAEKERDKLKATFIYKRVSLGVGVVKE*
Ga0137399_104929492	3300012203	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
Ga0137399_111521572	3300012203	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0137360_114522192	3300012361	Vadose Zone Soil	MKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137398_105518582	3300012683	Vadose Zone Soil	SAKRMNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0137398_107473212	3300012683	Vadose Zone Soil	MSAKRTTGRWVVYERRSGGFIFLSRPFTRRAKAEKYRDKLGATFRYKVSLGV
Ga0137397_100008524	3300012685	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESDKLEAMFTSEKVSLGVGAIAKK*
Ga0137396_101718095	3300012918	Vadose Zone Soil	LFRYAITLPMFAKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137396_102766543	3300012918	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESDKLEAAFTYKVSLGVGAIAKK*
Ga0137396_108248971	3300012918	Vadose Zone Soil	VYERRNGEFVFLSRFFATKAQAEKERDKLTAPFTYKKVSLGVGI
Ga0137394_100739807	3300012922	Vadose Zone Soil	VYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137394_111939052	3300012922	Vadose Zone Soil	YERRDGEFIFLSRPFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0137359_100222505	3300012923	Vadose Zone Soil	MSAKRTKGRWVVCEHRKAEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE*
Ga0137359_100489409	3300012923	Vadose Zone Soil	YERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137359_101215854	3300012923	Vadose Zone Soil	VYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
Ga0137359_102758791	3300012923	Vadose Zone Soil	MSAKRTKGRWVVYEYRKGEFIVYSRLSTTRAQAEKERDKLKAAFKSKQVSLGVGVVPANSTGRR*
Ga0137419_100369167	3300012925	Vadose Zone Soil	AKRTTGRWVVYERLDGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0137416_102385061	3300012927	Vadose Zone Soil	RNGEFIFLSRLFTTRAQAEKGRDKLKATFIYKRVSLGVGVVKE*
Ga0137404_113145141	3300012929	Vadose Zone Soil	RYAITFPMSAKRTTGRWGVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137404_117762272	3300012929	Vadose Zone Soil	AKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137404_123128481	3300012929	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSFGVGAIAKK*
Ga0137410_1000060914	3300012944	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESNKLEAMFTSEKVSLGVGAIAKK*
Ga0137405_14107284	3300015053	Vadose Zone Soil	VYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137418_1000048234	3300015241	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0187877_13561901	3300017931	Peatland	VYERRNGEFIFLSRLFTTRAQAEKEREKLKAPSTYKRASLGVGFVVKV
Ga0187817_101300603	3300017955	Freshwater Sediment	MSAKRAKGRWVVYEHRNGKLIHLSRLFTTRAQAEKERDKLEAKVTYKKVSLGVGVVVKE
Ga0179590_11429042	3300020140	Vadose Zone Soil	MKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK
Ga0179592_100374291	3300020199	Vadose Zone Soil	MADWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK
Ga0179592_100849263	3300020199	Vadose Zone Soil	MSAKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK
Ga0179592_104379021	3300020199	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSL
Ga0215015_109799141	3300021046	Soil	VYEQRNGKFIFLSRLFTTKAQAEKERDRLEAKFTYKKVSFGVGIVKE
Ga0210404_100534304	3300021088	Soil	VTVGSYVITLPMSAKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKERDKLEAAFTYKKVSLGVGAIAKK
Ga0210404_101982411	3300021088	Soil	MSKRANARWVVYEHRKGEFLFVSRLFTTRAQAERERDKLEAMFTYKRVSLGVGVVKE
Ga0210400_103604911	3300021170	Soil	GSHGITLPMSAKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKERDKLEAAFTYKKVSLGVGAIAKK
Ga0210389_111593572	3300021404	Soil	SSWCPSCYNSPMSKRANARWVVYEHRKGEFLFVSRLFTTRAQAERERDKLEAMFTYKRVSLGVGVVKE
Ga0209438_12114721	3300026285	Grasslands Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESNKLEAMFTSEKVSLGVGAIAKK
Ga0209647_10045873	3300026319	Grasslands Soil	VYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE
Ga0257163_10054594	3300026359	Soil	VYERRNEEFIRLSRLFTTRAQAEKERDKLKATFTYKRASLGVGVV
Ga0257181_10854461	3300026499	Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAMAKK
Ga0209648_1000159519	3300026551	Grasslands Soil	MSKRANARWVVYEHRNGEFLFVSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKE
Ga0209648_100630453	3300026551	Grasslands Soil	MTLSMSANRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLKAMFTYKRVSLGVGVVTE
Ga0209648_103975752	3300026551	Grasslands Soil	MSAKRMTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK
Ga0209179_10040392	3300027512	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK
Ga0209419_10079615	3300027537	Forest Soil	LFVSRGRYSGTLVTVGSYAITVLMSEKRMKGRWVVYERRNGEFIFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK
Ga0209419_10585752	3300027537	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLG
Ga0209733_10529252	3300027591	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK
Ga0209588_11052443	3300027671	Vadose Zone Soil	FRYAITLPMSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK
Ga0209448_102984702	3300027783	Bog Forest Soil	MSKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKEREKLKAPFTYKRVSLGVGFVVKVYR
Ga0209180_100900891	3300027846	Vadose Zone Soil	AMSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209180_102938323	3300027846	Vadose Zone Soil	MSKRTKRRWIVYEHRNGEFIRLSRLFTTKAQAEKEREKREKLRAFTFKKASLGVAVVVKE
Ga0209180_107225232	3300027846	Vadose Zone Soil	MKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209701_100617181	3300027862	Vadose Zone Soil	AITLSMSAKRTKGQWVVYEHREGEFVSRSKLYTTRARAQKERDKLEAGLISKQVSLGVGIVAKE
Ga0209701_102985962	3300027862	Vadose Zone Soil	MSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209701_105111772	3300027862	Vadose Zone Soil	SAKRTKARWVVYEHRKGKFIRLSRPFTTRAQAEKERDKLEARFTCKKVSFGVGIVKG
Ga0209488_100401893	3300027903	Vadose Zone Soil	MSANRMKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAVAKK
Ga0209526_100021077	3300028047	Forest Soil	MSAKRIKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLKATFTYKVSLGVGAMAKK
Ga0137415_100131781	3300028536	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK
Ga0137415_100807376	3300028536	Vadose Zone Soil	MSKRANARWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAIAKK
Ga0137415_112647181	3300028536	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAAKESNKLEAMFTSEKVSLGVGAIAKK
Ga0307478_101582634	3300031823	Hardwood Forest Soil	MSAKRTKGQLVVYERPSGEFIFLSRLFTTRAQAERERDKLEATFTYKKVSLGVGAIAKK
Ga0307479_117168351	3300031962	Hardwood Forest Soil	MSAKRTKGQLVVYERPSGEFIFLSRLFTTRAQAERERDKLEATFTYKKVSLGVGAIA
Ga0311301_103773174	3300032160	Peatlands Soil	MCAKRTNGRWVVYERRNGEFIFLSRLLATRAQAEKERNKLKASFKSKRVSLGVGFVVKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences