Metagenome / Metatranscriptome Family F083791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083791
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	57 residues
Representative Sequence	GQIRALEAAALAKPRPTMTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP
Number of Associated Samples	83
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	98.21 %
% of genes from short scaffolds (< 2000 bps)	96.43 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.036 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.357 % of family members)
Environment Ontology (ENVO)	Unclassified (72.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.33% β-sheet: 0.00% Coil/Unstructured: 47.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF09860	DUF2087	6.25
PF08044	DUF1707	6.25
PF04286	DUF445	2.68
PF02129	Peptidase_S15	2.68
PF14833	NAD_binding_11	1.79
PF06736	TMEM175	1.79
PF00486	Trans_reg_C	1.79
PF13613	HTH_Tnp_4	1.79
PF00324	AA_permease	1.79
PF08530	PepX_C	1.79
PF12705	PDDEXK_1	0.89
PF02481	DNA_processg_A	0.89
PF01522	Polysacc_deac_1	0.89
PF01040	UbiA	0.89
PF01339	CheB_methylest	0.89
PF04229	GrpB	0.89
PF03176	MMPL	0.89
PF02518	HATPase_c	0.89
PF03193	RsgA_GTPase	0.89
PF07721	TPR_4	0.89
PF02861	Clp_N	0.89
PF03127	GAT	0.89
PF01544	CorA	0.89
PF00743	FMO-like	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	2.68
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	2.68
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	1.79
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.79
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	1.79
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	1.79
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	1.79
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.79
COG2936	Predicted acyl esterase	General function prediction only [R]	1.79
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.79
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.89
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.89
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.89
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.89
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.89
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
All Organisms	root	All Organisms	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
cellular organisms	root	All Organisms → cellular organisms	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.04 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.89 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.89 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.89 %
Mycolicibacterium fortuitum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium fortuitum	0.89 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110277086	Not Available	515	Open in IMG/M
3300004633\|Ga0066395_10602741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	644	Open in IMG/M
3300005186\|Ga0066676_10409877	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005332\|Ga0066388_103355210	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005363\|Ga0008090_15206417	Not Available	881	Open in IMG/M
3300005445\|Ga0070708_101425919	Not Available	646	Open in IMG/M
3300005454\|Ga0066687_10377387	Not Available	816	Open in IMG/M
3300005719\|Ga0068861_101668516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	629	Open in IMG/M
3300005764\|Ga0066903_100033139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5902	Open in IMG/M
3300005764\|Ga0066903_103170960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300005764\|Ga0066903_104771877	Not Available	721	Open in IMG/M
3300006953\|Ga0074063_11927941	Not Available	617	Open in IMG/M
3300009176\|Ga0105242_12448403	Not Available	570	Open in IMG/M
3300010361\|Ga0126378_11748778	Not Available	707	Open in IMG/M
3300010398\|Ga0126383_12279084	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012198\|Ga0137364_11464326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300012971\|Ga0126369_10790833	Not Available	1030	Open in IMG/M
3300015374\|Ga0132255_103839895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300016319\|Ga0182033_11176721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	686	Open in IMG/M
3300016341\|Ga0182035_10462041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1078	Open in IMG/M
3300016341\|Ga0182035_11834895	Not Available	549	Open in IMG/M
3300016357\|Ga0182032_10519369	Not Available	982	Open in IMG/M
3300016371\|Ga0182034_10312280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300016387\|Ga0182040_11265023	Not Available	622	Open in IMG/M
3300016387\|Ga0182040_11268233	Not Available	621	Open in IMG/M
3300016422\|Ga0182039_12039161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300017966\|Ga0187776_10868108	Not Available	653	Open in IMG/M
3300017970\|Ga0187783_10520802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300017972\|Ga0187781_11020980	Not Available	605	Open in IMG/M
3300018482\|Ga0066669_11282764	Not Available	662	Open in IMG/M
3300021560\|Ga0126371_10365017	Not Available	1581	Open in IMG/M
3300021560\|Ga0126371_11994709	Not Available	698	Open in IMG/M
3300021560\|Ga0126371_12294977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300021560\|Ga0126371_12877397	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_13033592	Not Available	568	Open in IMG/M
3300025905\|Ga0207685_10039409	Not Available	1754	Open in IMG/M
3300027787\|Ga0209074_10465314	Not Available	542	Open in IMG/M
3300031543\|Ga0318516_10551808	Not Available	659	Open in IMG/M
3300031543\|Ga0318516_10806135	Not Available	530	Open in IMG/M
3300031544\|Ga0318534_10246349	Not Available	1031	Open in IMG/M
3300031549\|Ga0318571_10454096	Not Available	509	Open in IMG/M
3300031572\|Ga0318515_10742780	Not Available	518	Open in IMG/M
3300031573\|Ga0310915_10875202	Not Available	630	Open in IMG/M
3300031679\|Ga0318561_10160548	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1210	Open in IMG/M
3300031679\|Ga0318561_10443570	Not Available	714	Open in IMG/M
3300031680\|Ga0318574_10158638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1288	Open in IMG/M
3300031681\|Ga0318572_10876229	Not Available	533	Open in IMG/M
3300031713\|Ga0318496_10299493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300031713\|Ga0318496_10355264	Not Available	809	Open in IMG/M
3300031719\|Ga0306917_11587839	Not Available	502	Open in IMG/M
3300031723\|Ga0318493_10803744	Not Available	530	Open in IMG/M
3300031736\|Ga0318501_10095281	Not Available	1477	Open in IMG/M
3300031744\|Ga0306918_10700641	Not Available	792	Open in IMG/M
3300031747\|Ga0318502_10132407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1410	Open in IMG/M
3300031747\|Ga0318502_10600758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300031747\|Ga0318502_11016827	Not Available	506	Open in IMG/M
3300031748\|Ga0318492_10735377	Not Available	529	Open in IMG/M
3300031765\|Ga0318554_10525560	Not Available	669	Open in IMG/M
3300031768\|Ga0318509_10456117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300031778\|Ga0318498_10043006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300031778\|Ga0318498_10148671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300031779\|Ga0318566_10460172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300031781\|Ga0318547_10188131	Not Available	1229	Open in IMG/M
3300031781\|Ga0318547_10346231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300031793\|Ga0318548_10056492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium fortuitum	1806	Open in IMG/M
3300031794\|Ga0318503_10132436	Not Available	801	Open in IMG/M
3300031795\|Ga0318557_10140434	Not Available	1089	Open in IMG/M
3300031795\|Ga0318557_10282209	Not Available	762	Open in IMG/M
3300031795\|Ga0318557_10392474	Not Available	638	Open in IMG/M
3300031796\|Ga0318576_10226037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300031805\|Ga0318497_10580801	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031819\|Ga0318568_10201211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1228	Open in IMG/M
3300031819\|Ga0318568_10925772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300031831\|Ga0318564_10229027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300031831\|Ga0318564_10287491	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031833\|Ga0310917_10956882	Not Available	575	Open in IMG/M
3300031845\|Ga0318511_10254025	Not Available	789	Open in IMG/M
3300031859\|Ga0318527_10265838	Not Available	729	Open in IMG/M
3300031859\|Ga0318527_10458515	Not Available	543	Open in IMG/M
3300031879\|Ga0306919_10891365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300031879\|Ga0306919_11091400	Not Available	609	Open in IMG/M
3300031893\|Ga0318536_10110560	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1383	Open in IMG/M
3300031897\|Ga0318520_10233759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300031897\|Ga0318520_10755456	Not Available	609	Open in IMG/M
3300031910\|Ga0306923_11513872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300031912\|Ga0306921_11085010	Not Available	898	Open in IMG/M
3300031941\|Ga0310912_10250030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1364	Open in IMG/M
3300031941\|Ga0310912_11235077	Not Available	568	Open in IMG/M
3300031941\|Ga0310912_11279457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300031946\|Ga0310910_10645085	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031954\|Ga0306926_10012952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9337	Open in IMG/M
3300031954\|Ga0306926_11888412	Not Available	675	Open in IMG/M
3300031954\|Ga0306926_12370103	Not Available	586	Open in IMG/M
3300031959\|Ga0318530_10119326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300032001\|Ga0306922_10833751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300032009\|Ga0318563_10200691	Not Available	1075	Open in IMG/M
3300032025\|Ga0318507_10496312	Not Available	531	Open in IMG/M
3300032035\|Ga0310911_10209167	Not Available	1111	Open in IMG/M
3300032041\|Ga0318549_10072828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1461	Open in IMG/M
3300032044\|Ga0318558_10262628	Not Available	851	Open in IMG/M
3300032054\|Ga0318570_10325633	Not Available	699	Open in IMG/M
3300032055\|Ga0318575_10119373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1293	Open in IMG/M
3300032059\|Ga0318533_10256819	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1262	Open in IMG/M
3300032064\|Ga0318510_10228039	Not Available	760	Open in IMG/M
3300032076\|Ga0306924_11269623	Not Available	793	Open in IMG/M
3300032089\|Ga0318525_10406235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300032089\|Ga0318525_10502720	Not Available	620	Open in IMG/M
3300032090\|Ga0318518_10253136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300032094\|Ga0318540_10433855	Not Available	635	Open in IMG/M
3300033158\|Ga0335077_11310284	Not Available	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	2.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.32%
Plants	Host-Associated → Plants	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1102770862	3300000956	Soil	IRALEGAALAKPRETITPAEIRALAAEAIAHLREVADKLAELSALLGDDEAGEDRP*
Ga0066395_106027413	3300004633	Tropical Forest Soil	SGEIRALEASALARPRKTMTPAEIRALATEAITHLHKVADKLAELSALLPDPEPGEGKP*
Ga0066676_104098771	3300005186	Soil	SLPGPGQIRALEGAALAKPRQTMTPAEIRALAEQAIAHLHQVAAKLAELSALLGGDQAGQDKP*
Ga0066388_1033552103	3300005332	Tropical Forest Soil	DAALAKPRQTMTSAEIRALATEAIAHLHEVAGKLAELSALVGDDEAGEGKP*
Ga0008090_152064171	3300005363	Tropical Rainforest Soil	LPGPGEIRALEAAALAKPKRTLTPAEIRALAAEAITHLHKVAAKLTELSALLSDDAPAEAQP*
Ga0070708_1014259193	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLPGPGQIRALEAAALAKPKKTRTSSEIRALAAEAITHLHKVADKLTELSALLSDDQPGEAQP*
Ga0066687_103773873	3300005454	Soil	PDQITALEAAALAKPRRTMTSAEIRALAAESIASLQEVAGKLADLSALLDDEAAEGGS*
Ga0068861_1016685161	3300005719	Switchgrass Rhizosphere	RLPGPGEIRMLEAAALATQNPTMTPAEIRALAAEAIAHLHEVAGKLAELSALLGGGEAGGGKP*
Ga0066903_1000331396	3300005764	Tropical Forest Soil	PGQIRALEGAALARPRATMTPAEIRALAEEAIAHLHEVAGKLAELSALLGGDKASEGRP*
Ga0066903_1031709603	3300005764	Tropical Forest Soil	LEGAALAKPRITMTPAEIRALAAEAIAHLHEVAGKLAELSALLGDDQGGEDKS*
Ga0066903_1047718771	3300005764	Tropical Forest Soil	GQIRALEAAALAKRRQTMTPAEIRARADEAIAHLQEVAAKLTELSALLADDEGGEGKP*
Ga0074063_119279411	3300006953	Soil	RAAGLPRPDQITALEAAALAKPRRTMTPTEIRALAAESIASLQEVAGKLAELSALLDDEAGEGRS*
Ga0105242_124484031	3300009176	Miscanthus Rhizosphere	TTMIRALEAAALAKPRPTMTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP*
Ga0126378_117487784	3300010361	Tropical Forest Soil	GEISALEATALARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALVADDEPGEGKP*
Ga0126383_122790843	3300010398	Tropical Forest Soil	RALEAGALAGPRKTMTPAEIRALAAEAIAHLHEVARKLADLSALLGDDEAGEDKP*
Ga0126383_127290271	3300010398	Tropical Forest Soil	LEAHALATPRNTMTPAEIRALTAETISALQQIAGNLTRLSALLGDEEAGDGERTSQGSEGGS*
Ga0137364_114643261	3300012198	Vadose Zone Soil	VAPPCPPGPDQIRTLEAAALAKPRRTITPAEIRALAAESIASLHEVAGKLADLSALLDDE
Ga0126369_107908331	3300012971	Tropical Forest Soil	ALEAAALARPGKTMTPAEIRALAAESIASLHEVAGKLAKLSALLGDDEVGEVGS*
Ga0132255_1038398951	3300015374	Arabidopsis Rhizosphere	LAKPRKSMTPAEIRARAAEAIIHLREVAAKIAELSALLGDDAVGEGES*
Ga0182033_111767211	3300016319	Soil	EIKALEAAALAKPRESMTPAEIRARAAEAIAHLHEVATKLAELSALLGDNGDKS
Ga0182035_104620411	3300016341	Soil	AAGLPAPDEIRTLEAAALAKPRKTMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0182035_118348953	3300016341	Soil	RAVSLPGPDQIRALEAAVLAKPRRTLTPAEIRALAAEAIGHLHEIAGKLTELSALLGDDEAGEGTP
Ga0182032_105193691	3300016357	Soil	EPDQVRALEAAVLARPRETSTPAEIRALAAESIASLREVADKLAELSALLDEGTS
Ga0182034_103122801	3300016371	Soil	AAALARPRSTTTPAEIRALAAESIASLHAIADKLAELSALLGDDQAGEGQP
Ga0182040_112650231	3300016387	Soil	RSRAANLPGSGQIRVLEAAALAKPRKAMAPAEIRAVAEEAIANLHEVAGQLAELSALLGDDEADGGKP
Ga0182040_112682331	3300016387	Soil	ARLPDPDQIRALEAAALAKPRKTMTPAEIRALAAAAIGHLHEVAGKLGELSALLGEDQS
Ga0182039_120391613	3300016422	Soil	GPGEIRALEAAALAKPKKTRTPAEIRALAAEAIAHLHKVAAKLTELSALLSDDQAEAGQP
Ga0187776_108681081	3300017966	Tropical Peatland	RALEAAALAKPRETMTPAEIRALAEEAIVHLHQVADNLAQLAALLGDDETGEGKP
Ga0187783_105208021	3300017970	Tropical Peatland	PGPDQIRALEAAALTKPRPAMTPDQIRALAAESIASLNEVAGKLAELSALLSDGEADEGR
Ga0187781_110209804	3300017972	Tropical Peatland	RALEAAALAKPRKAMTPAEIRALAAESIASLHEVASKLAELSALLGDDEAGEGRS
Ga0066669_112827641	3300018482	Grasslands Soil	PGEIKALETAALATPRQTMTPAEIRALAAEAIAHLHEVAGKLAELSALLGGGEVSEGKP
Ga0126371_103650173	3300021560	Tropical Forest Soil	RALEAAALAKPRKTMAPAQIRAAAEEAIAHLHEVAGKLAELSALLADDEADGGKP
Ga0126371_119947091	3300021560	Tropical Forest Soil	ALARPRRTTTPAEIRILAAEAIAHLHEVAGKLAELSALLSDEAGEGKP
Ga0126371_122949773	3300021560	Tropical Forest Soil	SLPAPDEIRTLEAAALAKPRKTMTPAEIRARAAEAIIQLREVAAKIAELSALLGDDAVGEAES
Ga0126371_128773971	3300021560	Tropical Forest Soil	PGEIRALEAAALAKPGKPVTPAEIRALAAEAIAHLNVVAGKLMELSALLGDEPGEGKP
Ga0126371_130335923	3300021560	Tropical Forest Soil	VRVLEASALTRPRGRMTPAEIRALAEAAIAHLHEVAGKLEELSALLGDDEADGASHERA
Ga0207685_100394091	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GQIRALEAAALAKPRPTMTPAEIRALAAEAIAHLHEVAGQLAELSALLGDDEAGEDKP
Ga0209074_104653141	3300027787	Agricultural Soil	PGSGEIRALEASALAQPRKAMTPAQIRTLAAEAITQLHKVADRIAELSVLLADDAAGEGK
Ga0318516_105518083	3300031543	Soil	PGEIRRLETTALARPRATMTPAEIRALAEETIAHLHEVAAKLAELSALLGDDQAGEAKP
Ga0318516_108061353	3300031543	Soil	PGPGQIRALEAAALAKPRQTMTPAEIRVLAAEAIAQLHEVAGKLTELSALLGADKAGEDQ
Ga0318534_102463493	3300031544	Soil	PGSGEIRALEASVLARPRKTMTPAEIRALAAEAIAHLHRVADKLTELSALLADDEPSEGK
Ga0318571_104540961	3300031549	Soil	AALARPRRTMTPAEIRALAAESIASLHEVAGKLAELSALLGDDEAGEGTS
Ga0318515_107427803	3300031572	Soil	AAALAKPRKTMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0310915_108752023	3300031573	Soil	KALEAAALAKPRDTMTPADIRALAAEAIAHLREVAGKLAELSALLGDGEADEGKS
Ga0318561_101605484	3300031679	Soil	EEIRALEAAALAKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318561_104435703	3300031679	Soil	SRAASLPGPGQIRVLEAAALAKPRKAMAPAEIRAVAEEAIANLHEVAGQLAELSALLGDDEADGGKP
Ga0318574_101586383	3300031680	Soil	DQIRALEAAALAKPRKTMTPAEIRALAAAAIGHLHEVAGKLGELSALLGEDQS
Ga0318572_108762291	3300031681	Soil	AARLPDAGEIRALEAAALAKPRKTMTPAEIRALAAAAIGHLHEVADTLGELSALLGEDQS
Ga0318496_102994934	3300031713	Soil	LEAAALAKPRKNMSPAEIRALTAESITSLHEVASKLAELSALLGDDEVGEGTS
Ga0318496_103552643	3300031713	Soil	GPEEIRALETAALGKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0306917_115878393	3300031719	Soil	SGEIRALEASALARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318493_108037441	3300031723	Soil	PGPGEIRRLETTALARPRATMTPAEIRALAEETIAHLHEVAAKLAELSALLGDDQAGEAK
Ga0318501_100952814	3300031736	Soil	IRALEAAALAKPRQAMTPAEIRALATEAIAHLHEVAGKLAELSGLLGDDEPGEGQT
Ga0306918_107006411	3300031744	Soil	AALGKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318502_101324071	3300031747	Soil	IRALEAAVLAKPRKNMTPAEIRALTAESITSLHEVAGKLAELSALLGDDEAGEGTS
Ga0318502_106007581	3300031747	Soil	IRTLEAAALAKPRKTMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0318502_110168272	3300031747	Soil	ALEAAALAKPRKTMTPAEIRALAAAAIGHLHEVADTLGELSALLGEDQS
Ga0318492_107353772	3300031748	Soil	KALEAAALAKSRDTMTPAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGTP
Ga0318554_105255601	3300031765	Soil	PGPGEIKALEAAALAKSRDTMTPAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGT
Ga0318509_104561173	3300031768	Soil	PGPGQIRALEAAALARPRKTMTPAEIRALAAESIASLHQVAGKLAELSALLGEDEVGEDEVGEGTS
Ga0318498_100430061	3300031778	Soil	PGSGEIRALEAAALAKPREAMTPAEIRALAAEAIIHLHEVAGKLAELSALLSDDKASEGK
Ga0318498_101486711	3300031778	Soil	DEIRTLEAAALAKPRKTMTPAEIRALAAAAIGHLHEVADKLGELSALLGEDQS
Ga0318566_104601721	3300031779	Soil	ALEAAALAKPREAMTSAEIRALAAESIASLREVAGKLAELSALLGVEEIVEAQS
Ga0318547_101881313	3300031781	Soil	PGSGEIKALEAAALAKPRQAMTPAEIRALATEAIAHLHEVAGKLAELSGLLGDDEPGEGQ
Ga0318547_103462311	3300031781	Soil	IRALEAAALAKPRKNMSPAEIRALTAESITSLHEVASKLAELSALLGDDEVGEGTS
Ga0318548_100564921	3300031793	Soil	ASLPGPDQIRALEAAALARPRKTMTPAEIRALAAEAIASLHEVTGQLIELSALLGDDETGEGTS
Ga0318503_101324361	3300031794	Soil	LEAAALAKTTRTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0318557_101404344	3300031795	Soil	IKALEAAALAKSRDTMTPAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGTP
Ga0318557_102822094	3300031795	Soil	LPGPGQIRALEAAALAKPRQTMTPAEIRALAAEAIAQLHEVAGKLTELSALLGADKAGEDQA
Ga0318557_103924741	3300031795	Soil	RLPDPDEIRTLEAAALAKPRKTMTPAEIRALAAAAIGHLHEVADKLGELSALLGEDQS
Ga0318576_101469814	3300031796	Soil	LEAAALAKPRKNMTPAEIRALTAESITSLHEVAGKLAELSALLGDDEAGEGTS
Ga0318576_102260373	3300031796	Soil	GEIRALEASALARPRKTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0318497_105808011	3300031805	Soil	LEAAALAKPRQAMTPAEIRARATEAIAQLHEVADKLAELSALLGDDAAGGGAS
Ga0318568_102012115	3300031819	Soil	PGPGQIRALEAAVLAKPRKNMTPAEIRALTAESITSLHEVAGKLAELSALLGDDEAGEGT
Ga0318568_109257721	3300031819	Soil	IRALEAAALATPRRTMTPAEIRALAAESIASLHEVAGKLAELSALLDDDAGEGRS
Ga0318564_102290271	3300031831	Soil	LPGPGEIRALEAAALAKPKKTLTSAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318564_102874911	3300031831	Soil	QIRALEAAALAKPRKTMTPAEIRALAAAAIGHLHEVAGKLGELSALLGEDQS
Ga0310917_109568823	3300031833	Soil	LEAAALAEPRRTMTRTEIRALAAESIASLQEVAGKLAELSELLDDDEGGEAT
Ga0318511_102540253	3300031845	Soil	PGQIRVLEAAALAKPRKAMAPAEIRAVAEEAIANLHEVAGQLAELSALLGDDEADGGKP
Ga0318527_102658381	3300031859	Soil	ALEGVALAKPGITMTPVEIRALAAEAIAHLHEVAGKLAELSALLGDDQGGEDKS
Ga0318527_104585151	3300031859	Soil	AAALAKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0306919_108913652	3300031879	Soil	ARLPGSGEIRALEAAALAKPRETMTPAQIRAVAAQAITHLREVADKLAELSVLLDGDKPGEDES
Ga0306919_110914001	3300031879	Soil	EAAVLAKPRRTLTPAEIRALAAEAIGHLHEIAGKLTELSALLGDDEAGEGTP
Ga0318536_101105601	3300031893	Soil	EEIRALETAALGKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318520_102337591	3300031897	Soil	AARLPGSGEIRALEAAALAKPRETMTPAQIRAVAAQAITHLREVADKLAELSVLLDGDKPGEDES
Ga0318520_107554563	3300031897	Soil	AGEIRALETAALAKPRQTMTSADIRALAAEAIVHLQEVAGKLAELSALLGDEGEGGKP
Ga0306923_115138721	3300031910	Soil	IRALEAAALAKPKKTRTPAEIRALAAEAIAHLHKVAAKLTELSALLGDDQAEAGQP
Ga0306921_110850103	3300031912	Soil	AAALAKPRQAMTPAEIRALATEAIAHLHEVAGKLAELSGLLGDDEPGEGQT
Ga0310912_102500301	3300031941	Soil	GSGEIRALEASVLARPRRTMTPAEIRALAAEAIAHLHKVADKLAELSALLPDPEPGEGKP
Ga0310912_112350773	3300031941	Soil	RALETAALARPRESMTPAEIRAVAADAIAHLQEVAGKLGELSALLGDGEASEGKS
Ga0310912_112794571	3300031941	Soil	ALEAAALAKPKKTLTSAEIRALAAEAITHLHKVAAKLTELSALLGDDQPGEAQP
Ga0310910_106450853	3300031946	Soil	AASLPGPGEIRALEAAALAKPRTTTTPAQIRALAAEAVAQLHEVAAKLTELSALLGDDQADEGKP
Ga0306926_100129521	3300031954	Soil	PGEIRALEAAALAKTTRTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0306926_118884123	3300031954	Soil	GPGEIRRLETTALARPRATMTPAEIRALAEETIAHLHEVAGKLAELSALLGDDQAAEAKP
Ga0306926_123701031	3300031954	Soil	ASLPGPDQIRALEAAALAKRRKTMTPAEIRALAAESIASLQEVAGHLAELSALLGDDEAGEGPS
Ga0318530_101193261	3300031959	Soil	IRTLEAAALAKPRKAMTPAEIRARAAEAIIHLREVAAQIAELSALLGDDAVGEGKS
Ga0306922_108337513	3300032001	Soil	GPGEIRALEAAALAEPKKTLTAAEIRALAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318563_102006912	3300032009	Soil	TAALAKPRESITPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318507_104963122	3300032025	Soil	PGSGEIKALEAAALAKPRDTMTPADIRALAAEAIAHLREVAGKLAELSALLGDGEADEGK
Ga0310911_102091673	3300032035	Soil	RALEAAALAKSREAMTPAEIRALAAEAIIHLHEVAGKLAELSALLSDDKASEGKS
Ga0318549_100728281	3300032041	Soil	ALEAAALAKPRDTMTPADIRALAAEAIAHLREVAGKLAELSALLGDGEADEGKS
Ga0318558_102626283	3300032044	Soil	LPGPGEIKALEAAALAKSRDTMTPAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGTP
Ga0318570_103256333	3300032054	Soil	RARAASLPGPGEIKALEAAALAKSRDTMTPAEIRALAADAIGQLHEAAGKLAELSALLGGDEAGEGTP
Ga0318575_101193731	3300032055	Soil	GEIGALEAAALAKPRATMTRAEIRAVAAQAITHLHEVADKLAELSVLLGGDESGEDES
Ga0318533_102568194	3300032059	Soil	TAALGKPRESMTPAEIRARAAETIAQLHAVAGKLAELSALLGDDEDRS
Ga0318510_102280391	3300032064	Soil	RALEAAALAKTTRTLPPAEIRALAAEAIAHLHKVADKLTELSALLGDDQASEGRP
Ga0306924_112696232	3300032076	Soil	GQIRVLEAAALAKPRKAMAPAEIRAVADEAIAHLRDVADRLAELSALLGDDEADGGKP
Ga0318525_104062351	3300032089	Soil	ALEAAALAKPKKTLTSAEIRAVAAEAITHLHKVAAKLTELSALLSDDQPGEAQP
Ga0318525_105027201	3300032089	Soil	PGPDQIMVLEAAALAKPRKTMNPAEIRALAAESIASLQEVADKLAELSALLGDDEAGEGG
Ga0318518_102531363	3300032090	Soil	GEIRALEAAALAGPKKTLTPAEIRALATEAITHLHKVAAKLTELSALLGDDQPGEAQP
Ga0318540_104338553	3300032094	Soil	TLEAAALAKPRKTMTPAEIRALAAAAIGHLHEVADKLGELSALLGEDQS
Ga0335077_113102841	3300033158	Soil	RAMEAAARAKPGQTMTPAEIRALAAEAIAHLHEVAGKLAELSALLGGDEAGEGKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences