Metagenome Family F083841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083841
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	62 residues
Representative Sequence	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGALAWAAIITLAMAVWRWLA
Number of Associated Samples	90
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.57 %
% of genes near scaffold ends (potentially truncated)	24.11 %
% of genes from short scaffolds (< 2000 bps)	82.14 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.071 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.67% β-sheet: 0.00% Coil/Unstructured: 43.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03486	HI0933_like	6.25
PF01451	LMWPc	5.36
PF01175	Urocanase	3.57
PF12587	DUF3761	1.79
PF17158	MASE4	1.79
PF01510	Amidase_2	1.79
PF13561	adh_short_C2	0.89
PF00196	GerE	0.89
PF00829	Ribosomal_L21p	0.89
PF02615	Ldh_2	0.89
PF03739	LptF_LptG	0.89
PF13840	ACT_7	0.89
PF02798	GST_N	0.89
PF05013	FGase	0.89
PF02915	Rubrerythrin	0.89
PF14023	DUF4239	0.89
PF02517	Rce1-like	0.89
PF10150	RNase_E_G	0.89
PF00348	polyprenyl_synt	0.89
PF13424	TPR_12	0.89
PF10282	Lactonase	0.89
PF13683	rve_3	0.89
PF13722	CstA_5TM	0.89
PF04355	SmpA_OmlA	0.89
PF07883	Cupin_2	0.89
PF00171	Aldedh	0.89
PF13193	AMP-binding_C	0.89
PF14310	Fn3-like	0.89
PF01797	Y1_Tnp	0.89
PF13419	HAD_2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	12.50
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	12.50
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	6.25
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	6.25
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	6.25
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	6.25
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	6.25
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	6.25
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	6.25
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	6.25
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	6.25
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	6.25
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	3.57
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.89
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.89
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.89
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.89
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.89
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.89
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	0.89
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.89
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.89
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.89
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.82 %
Unclassified	root	N/A	11.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	75.89 %
Unclassified	root	N/A	11.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	33.04 %
Unclassified	root	N/A	11.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.79 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	22.32 %
Unclassified	root	N/A	11.61 %
Betaproteobacteria bacterium 13_1_40CM_4_64_4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	10.71 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	22.32 %
Unclassified	root	N/A	11.61 %
Betaproteobacteria bacterium 13_1_40CM_4_64_4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	10.71 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.89 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	22.32 %
Unclassified	root	N/A	11.61 %
Betaproteobacteria bacterium 13_1_40CM_4_64_4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	10.71 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.89 %
Cupriavidus basilensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis	0.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
unclassified Methylotenera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	22.32 %
Unclassified	root	N/A	11.61 %
Betaproteobacteria bacterium 13_1_40CM_4_64_4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	10.71 %
Cupriavidus basilensis OR16	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis → Cupriavidus basilensis OR16	0.89 %
Variovorax sp. URHB0020	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	0.89 %
Methylotenera sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	0.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig166571	Not Available	757	Open in IMG/M
3300000956\|JGI10216J12902_118239195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	566	Open in IMG/M
3300001536\|A1565W1_12009410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	904	Open in IMG/M
3300001593\|JGI12635J15846_10101048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2069	Open in IMG/M
3300002908\|JGI25382J43887_10101578	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300005171\|Ga0066677_10199260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1120	Open in IMG/M
3300005171\|Ga0066677_10228837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1050	Open in IMG/M
3300005171\|Ga0066677_10503003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	696	Open in IMG/M
3300005355\|Ga0070671_100818817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	811	Open in IMG/M
3300005436\|Ga0070713_100000798	All Organisms → cellular organisms → Bacteria → Proteobacteria	20139	Open in IMG/M
3300005439\|Ga0070711_100506363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	996	Open in IMG/M
3300005445\|Ga0070708_100326954	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005446\|Ga0066686_10381840	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300005447\|Ga0066689_10789724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	590	Open in IMG/M
3300005451\|Ga0066681_10016919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3665	Open in IMG/M
3300005454\|Ga0066687_10152711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1223	Open in IMG/M
3300005471\|Ga0070698_102046616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	526	Open in IMG/M
3300005518\|Ga0070699_101574535	Not Available	602	Open in IMG/M
3300005545\|Ga0070695_100283124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1219	Open in IMG/M
3300005553\|Ga0066695_10906255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	503	Open in IMG/M
3300005842\|Ga0068858_100770298	Not Available	938	Open in IMG/M
3300005952\|Ga0080026_10014809	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300006049\|Ga0075417_10114881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1231	Open in IMG/M
3300006852\|Ga0075433_10201251	Not Available	1770	Open in IMG/M
3300006864\|Ga0066797_1213453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	673	Open in IMG/M
3300009012\|Ga0066710_101220136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1165	Open in IMG/M
3300009038\|Ga0099829_11119111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	653	Open in IMG/M
3300009089\|Ga0099828_11986616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300009090\|Ga0099827_10874692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	778	Open in IMG/M
3300009137\|Ga0066709_100276245	Not Available	2267	Open in IMG/M
3300009137\|Ga0066709_103429738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	576	Open in IMG/M
3300010322\|Ga0134084_10454514	Not Available	510	Open in IMG/M
3300011003\|Ga0138514_100010057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1523	Open in IMG/M
3300011271\|Ga0137393_10683345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	879	Open in IMG/M
3300012189\|Ga0137388_11771386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	550	Open in IMG/M
3300012205\|Ga0137362_10511063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	1038	Open in IMG/M
3300012206\|Ga0137380_10725343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	862	Open in IMG/M
3300012207\|Ga0137381_10980750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	729	Open in IMG/M
3300012209\|Ga0137379_11011780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	736	Open in IMG/M
3300012209\|Ga0137379_11095088	Not Available	702	Open in IMG/M
3300012212\|Ga0150985_107849542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	617	Open in IMG/M
3300012285\|Ga0137370_10237414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1077	Open in IMG/M
3300012353\|Ga0137367_10346153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1058	Open in IMG/M
3300012355\|Ga0137369_11026623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	544	Open in IMG/M
3300012359\|Ga0137385_10976313	Not Available	699	Open in IMG/M
3300012362\|Ga0137361_11313510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	648	Open in IMG/M
3300012469\|Ga0150984_100774766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	677	Open in IMG/M
3300012509\|Ga0157334_1027044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	674	Open in IMG/M
3300012683\|Ga0137398_10370591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	972	Open in IMG/M
3300012917\|Ga0137395_10832864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	668	Open in IMG/M
3300012923\|Ga0137359_10297811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1437	Open in IMG/M
3300012989\|Ga0164305_12012065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	527	Open in IMG/M
3300015087\|Ga0167637_1000883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4412	Open in IMG/M
3300015090\|Ga0167634_1002790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2269	Open in IMG/M
3300015371\|Ga0132258_10040421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10574	Open in IMG/M
3300015371\|Ga0132258_11895243	All Organisms → cellular organisms → Bacteria → Proteobacteria	1501	Open in IMG/M
3300015371\|Ga0132258_12349954	Not Available	1336	Open in IMG/M
3300015373\|Ga0132257_100251263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2111	Open in IMG/M
3300015374\|Ga0132255_100759187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1444	Open in IMG/M
3300018027\|Ga0184605_10260734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	787	Open in IMG/M
3300018027\|Ga0184605_10305526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	720	Open in IMG/M
3300018028\|Ga0184608_10492209	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300018052\|Ga0184638_1004090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4654	Open in IMG/M
3300018053\|Ga0184626_10447668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	508	Open in IMG/M
3300018056\|Ga0184623_10180243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	974	Open in IMG/M
3300018482\|Ga0066669_10005287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5952	Open in IMG/M
3300018482\|Ga0066669_12256455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	518	Open in IMG/M
3300019888\|Ga0193751_1002723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10639	Open in IMG/M
3300019888\|Ga0193751_1047237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis → Cupriavidus basilensis OR16	1879	Open in IMG/M
3300021080\|Ga0210382_10546806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	513	Open in IMG/M
3300021344\|Ga0193719_10231853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	784	Open in IMG/M
3300021413\|Ga0193750_1012790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2095	Open in IMG/M
3300021478\|Ga0210402_10232209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	1701	Open in IMG/M
3300021478\|Ga0210402_10401945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1272	Open in IMG/M
3300021478\|Ga0210402_10587708	Not Available	1032	Open in IMG/M
3300022534\|Ga0224452_1046408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1284	Open in IMG/M
3300022534\|Ga0224452_1155998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300022534\|Ga0224452_1215005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	590	Open in IMG/M
3300025910\|Ga0207684_10338272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1296	Open in IMG/M
3300025910\|Ga0207684_10577963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	960	Open in IMG/M
3300025910\|Ga0207684_11053178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	679	Open in IMG/M
3300025910\|Ga0207684_11683699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	511	Open in IMG/M
3300025915\|Ga0207693_11007259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	636	Open in IMG/M
3300025922\|Ga0207646_10032396	All Organisms → cellular organisms → Bacteria → Proteobacteria	4731	Open in IMG/M
3300025922\|Ga0207646_11004952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	737	Open in IMG/M
3300025931\|Ga0207644_10746751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	817	Open in IMG/M
3300026035\|Ga0207703_10871468	Not Available	861	Open in IMG/M
3300026217\|Ga0209871_1014304	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300026271\|Ga0209880_1091059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	626	Open in IMG/M
3300026296\|Ga0209235_1288515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	502	Open in IMG/M
3300026309\|Ga0209055_1305621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	502	Open in IMG/M
3300026318\|Ga0209471_1102862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1233	Open in IMG/M
3300026322\|Ga0209687_1145671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	762	Open in IMG/M
3300026550\|Ga0209474_10080866	All Organisms → cellular organisms → Bacteria → Proteobacteria	2232	Open in IMG/M
3300027587\|Ga0209220_1042025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1223	Open in IMG/M
3300027645\|Ga0209117_1008220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3552	Open in IMG/M
3300027678\|Ga0209011_1003324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5642	Open in IMG/M
3300027678\|Ga0209011_1016242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2443	Open in IMG/M
3300027678\|Ga0209011_1119422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	756	Open in IMG/M
3300027902\|Ga0209048_10093285	All Organisms → cellular organisms → Bacteria → Proteobacteria	2331	Open in IMG/M
3300028536\|Ga0137415_11475031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	505	Open in IMG/M
3300028792\|Ga0307504_10015680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1802	Open in IMG/M
3300030114\|Ga0311333_11346458	Not Available	613	Open in IMG/M
3300031720\|Ga0307469_10802006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	864	Open in IMG/M
3300031720\|Ga0307469_11299050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	691	Open in IMG/M
3300031720\|Ga0307469_11389857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	669	Open in IMG/M
3300032180\|Ga0307471_102436996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_40CM_4_64_4	661	Open in IMG/M
3300032770\|Ga0335085_10627075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1206	Open in IMG/M
3300034115\|Ga0364945_0091104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	886	Open in IMG/M
3300034178\|Ga0364934_0000759	All Organisms → cellular organisms → Bacteria → Proteobacteria	9951	Open in IMG/M
3300034354\|Ga0364943_0053387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1341	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.39%
Host-Associated	Host-Associated	11.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.57%
Plants	Host-Associated → Plants	11.61%
Aquatic	Environmental → Aquatic	9.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.11%
Sediment	Environmental → Aquatic → Sediment	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Floodplain	Environmental → Terrestrial → Floodplain	2.68%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Peat	Environmental → Terrestrial → Peat	0.89%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	19.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015087	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6A, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01861210	2140918007	Soil	MGMLDQDTSTMRERIENTLIELRKPELSPQSKARGIMVGTLFGVIAWAAIVALGLAVWRSLN
JGI10216J12902_1182391951	3300000956	Soil	MSRFDEDTSAMRMRLAATPIELRKPEIGPQSKMRGILVGVLLGAVAWAVIIGLG
A1565W1_120094103	3300001536	Permafrost	MSRFDQDTSTMRMRIEATPIELRKPEIGPQSKARGIMVGALLGVGAWAAIIALGAAVWRGLR*
JGI12635J15846_101010481	3300001593	Forest Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLE*
JGI25382J43887_101015782	3300002908	Grasslands Soil	MSRFDEDTSAMRMRIAATPIELRKPEMGPQSKARGILVGVMLGAIAWAVIIVLGVAVWRWLS*
Ga0066677_101992602	3300005171	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGALAWAAIITLALAVWRWLA*
Ga0066677_102288371	3300005171	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGALAWAAIITLAMAVWRWLA*
Ga0066677_105030031	3300005171	Soil	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILFGVLLGAVMWIAIIALGVAVWRWLS*
Ga0070671_1008188172	3300005355	Switchgrass Rhizosphere	MSRFDEDTSIMRSRLAATPIELRKPELEPQTRARGIALGTLLGAVAWAMLLTVGWAAWQWMR*
Ga0070713_1000007982	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSRFDEDTSVMRARREATLIELLKPELSPQSKARGIVNGVLLGAVLWAAIIALGVTIWHRLNS*
Ga0070711_1005063632	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMFGALLGALAWAAIITLAMAVWRWLE*
Ga0070708_1003269542	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFDEDTSAMRMRIAATPIELRKPELGPQSKARGILVGVLLGAVAWVAIIALGVAVWKLLS*
Ga0066686_103818402	3300005446	Soil	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILVGVMLGAVMWVAIIALGVAVWRWLS*
Ga0066689_107897242	3300005447	Soil	MSRFDEDTSAMRMRIAATPIELRKPEIGPQSKARGILVGVLLGAIAWVVIIVLGVAVWRWLSY*
Ga0066681_100169196	3300005451	Soil	MSRFDEDTSAMRMRMAATPIELRKPEIGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWLS*
Ga0066687_101527111	3300005454	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGAFAWAAIITLAMAVWRWLA*
Ga0070698_1020466161	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTSTMRMRLESTPIELRKPEVGPQSKARGIMVGALLGMVAWAAIIALGLAVWRSFG
Ga0070699_1015745352	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSMLDQDTSTMRMRIEATLTELRTPEIQPQSKARGIMAGALLGVIAWVAMIALGLAVWRSLN*
Ga0070695_1002831243	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDQDTSTMRMRIEATPIELRKREIGPQSKARGILFGAVLGLGAWAVIIALGIAMWKWLS*
Ga0066695_109062551	3300005553	Soil	MSRFDEDTSAMRMRMAATPIELRKPEMGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWFS*
Ga0068858_1007702982	3300005842	Switchgrass Rhizosphere	MSRFDEDTSIMRSRLAATPIELRKPELEPQSRARGIALGALLGALVWVAMLTLGWAVWQWMQ*
Ga0080026_100148093	3300005952	Permafrost Soil	MSRFEDTSIMRARLNSTLIELRKPEIGPQSKARGILIGAILGLLAWFAIIAVFVELRRWMR*
Ga0075417_101148812	3300006049	Populus Rhizosphere	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILVGVMLGAIMWVAIIALGVAVWKWLS*
Ga0075433_102012512	3300006852	Populus Rhizosphere	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILVGVMLGAVMWVAIIALGVAVWKWLS*
Ga0066797_12134531	3300006864	Soil	MRMRMENTLIELRKPELGPQSKSRGILFGAVLGVLAWAAIITLCLAVWRWLE*
Ga0066710_1012201361	3300009012	Grasslands Soil	MSRFDEDTSAMRMRMAATPIELRKPEMGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWFS
Ga0099829_111191112	3300009038	Vadose Zone Soil	MSRFDEDTSAMRMRIAATPIELRKPELGPQSKVRGILFGVLLGAVAWVAIIALGVAVWRWLS*
Ga0099828_119866161	3300009089	Vadose Zone Soil	GGLFLGGGFTMSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLE*
Ga0099827_108746922	3300009090	Vadose Zone Soil	MSRFDQDTSTMRMRVENTLIELRKTEIGPQSKARGILVGAVLGVLAWAAIITLCLAVWRWLE*
Ga0066709_1002762453	3300009137	Grasslands Soil	MSRFEDTSIMRMRMEATPIELRKPEIGPQSKARGIYIGALLGIGAWAAIIALCVEVWRLLR*
Ga0066709_1034297381	3300009137	Grasslands Soil	MVSCRDARGGVSGKGGITMSMLDQDTSTMRMRLETTPIELHKPEIGPQSKARGIMVGAILGVVAWAALIALGAAVWRSLG*
Ga0134084_104545141	3300010322	Grasslands Soil	SAMRMRMAATPIELRKPEIGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWLS*
Ga0138514_1000100571	3300011003	Soil	MSRFDQDTSTMRMRMENTLIELRKAEIGPQSKARGILVGAVLGVLAWAAIVALCLAVWRWLE*
Ga0137393_106833452	3300011271	Vadose Zone Soil	LFLGGGFTMSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLE*
Ga0137388_117713861	3300012189	Vadose Zone Soil	MSRFDEDTSAMRMRIAATPIELRKPELGPQSKARGILVGVLLGAVMWVAIIALGVAVWRWLS*
Ga0137362_105110632	3300012205	Vadose Zone Soil	MSRFDEDTSAMRMRMEATPIELRKPELGPQSKARGILVGVLLGAVAWAVIIVLGVAVWKWLG*
Ga0137380_107253431	3300012206	Vadose Zone Soil	MSMLDQDTSTMRMRLEAMPIELRKPEIAPQSKARGIMVGTLLGVGVWAAMIALGVAVWKWLS*
Ga0137381_109807502	3300012207	Vadose Zone Soil	MSRFDQDTSTMRMRVENTLIELRKPELGPQSKSRGILVGAVLGVLAWAAIIALCLAVWRWLE*
Ga0137379_110117801	3300012209	Vadose Zone Soil	MSILDEDTSTMRMRIDATLIDLRKAEIEPQSKARGIMVGALLGVGAWAAIIALGIAVWRWYSA*
Ga0137379_110950881	3300012209	Vadose Zone Soil	SRFEDTSIMRMRMEATPIELRKPEIGPQSKARGIYIGALLGIGAWAAIIALCVEVWRWLR
Ga0150985_1078495421	3300012212	Avena Fatua Rhizosphere	MSRFDEDTSIMRSRLAATPIELRKPEREPQTRARGIALGTLLGAVAWAMLLTVGWAAWQWMR*
Ga0137370_102374143	3300012285	Vadose Zone Soil	DQDTSTMRMRMENTLIELRKAEIGPQSKARGILFGAVLGVLAWAAIITLAMAVWRWLA*
Ga0137367_103461532	3300012353	Vadose Zone Soil	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILFGVLLGAVMWIAIIALGVAVWR
Ga0137369_110266231	3300012355	Vadose Zone Soil	MSRFDEDTSAMRMRLAATPIELRKPEIGPQSKMRGILVGVLLGAVAWAVIIGLGVAVWRWLR*
Ga0137385_109763132	3300012359	Vadose Zone Soil	FKLGDVFAMSRFEDTSIMRMRIEATPIELRKPEIGPQSKARGIYIGALLGIGAWAAIIALCVEVWRWLR*
Ga0137361_113135101	3300012362	Vadose Zone Soil	MKRDVLREEFTMSRFDQDTSTMRMRMENTLIELRKPQLGPQSKARGILVGALLGALAWAAISTLAMAVWRWLR*
Ga0150984_1007747663	3300012469	Avena Fatua Rhizosphere	HGFLTADPMSRFDEDTSIMRSRLAATPIELRKPEREPQTRARGIALGTLLGAVAWAMLLTVGWAAWQWMR*
Ga0157334_10270441	3300012509	Soil	MSRFDEDTSIMRMRMDATLIELRKREMSPQSKARGIMVGTLLGVGAWIAIIVLCIEAWRLLR*
Ga0137398_103705911	3300012683	Vadose Zone Soil	GRSFTMSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLA*
Ga0137395_108328641	3300012917	Vadose Zone Soil	EFTMSRFDQDTSTMRMRVENTLIELRKPEIGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLE*
Ga0137359_102978112	3300012923	Vadose Zone Soil	MKRDVLREEFTMSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLA*
Ga0164305_120120651	3300012989	Soil	MSRFDEDTSVMRARREATLIELLKPELAPQSKARGIAVGALLGAIIWAGIVALGVAIWRWATD*
Ga0167637_10008832	3300015087	Glacier Forefield Soil	MSRFEDTSIMRARLNSTLIELRKPEIGPQSKARGILIGAILGLLAWFAIIAVFVELRRLMR*
Ga0167634_10027903	3300015090	Glacier Forefield Soil	MSRFDQDTSTMRMRMENTLIELRKPEIGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLA*
Ga0132258_100404213	3300015371	Arabidopsis Rhizosphere	MSRFDEDTSVMRARREATLIELLKPELAPQSKARGIAMGALLGAIIWAVIVAVGVAIWRWTTG*
Ga0132258_118952431	3300015371	Arabidopsis Rhizosphere	VSRFDEDTSVMRVRREATLIELLKPELPPQSKARGIFNGVLLGAVVWAAIITLGMTIWHRLNS*
Ga0132258_123499542	3300015371	Arabidopsis Rhizosphere	VSRFDEDTSVMRIRREATLIELLKPELPPQSKARGIFNGVLLGAVVWAAIIALGMTIWHRLNS*
Ga0132257_1002512633	3300015373	Arabidopsis Rhizosphere	MSRFDEDTSIMRMRMDATLIELRKREMSPQSKARGIMVSTLLGVGAWIAVIVLCIEAWRLLR*
Ga0132255_1007591872	3300015374	Arabidopsis Rhizosphere	MSRFDEDTSVMRARREATLIELLKPELAPQSKARGIAIGALLGAIIWAGIVALGVAIWRWATD*
Ga0184605_102607341	3300018027	Groundwater Sediment	MSRLDQDTSTMRMRLEATPIELRKPEMGPQTKARGILVGALLGVAAWAAIIALGIAVWRWLG
Ga0184605_103055261	3300018027	Groundwater Sediment	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKSRGILVGAVLGVLAWAAIIALCLAVWRWLE
Ga0184608_104922091	3300018028	Groundwater Sediment	SIMRMRMEATPIELRKPEIGPQSKARGIYLGAVLGIGAWAAIIALCVEVWRWFR
Ga0184638_10040902	3300018052	Groundwater Sediment	MSRLDQDTSTMRMRLEATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGVAVWRWLS
Ga0184626_104476681	3300018053	Groundwater Sediment	MSRLDQDTSTMRMRLAATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGVAVWRWLS
Ga0184623_101802431	3300018056	Groundwater Sediment	MSRLDQDTSTMRMRLEATPIELRKPEMGPQSKARGILVGALLGVAAWAAIIALGV
Ga0066669_100052872	3300018482	Grasslands Soil	MSRFDEDTSAMRMRMAATPIELRKPEIGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWLS
Ga0066669_122564551	3300018482	Grasslands Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGALAWAAIITLALAVWRWLA
Ga0193751_10027236	3300019888	Soil	MSRFEDTSIMRMRMEATPIELRKPEIGPQSKARGIYIGALLGILAWAAIVALGVEVWRLL
Ga0193751_10472371	3300019888	Soil	MSRFDQDTSTMRMRIENTLIELRKPELGPQSKSRGILVGAVLGVLAWAAIIALCLAVWRWLE
Ga0210382_105468062	3300021080	Groundwater Sediment	MSRLDQDTSTMRMRMEATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGVAVWRWLS
Ga0193719_102318531	3300021344	Soil	MSRFDQDTSTMRMRIENTLIELRKAEIGPQSKARGILFGAVLGVLAWAAIVTLCLAVWRWLE
Ga0193750_10127904	3300021413	Soil	MSRFDQDTSTMRMRIENTLIELRKPELGPQSKARGIMVGALLGALAWAAIITLAMAVWRWLA
Ga0210402_102322091	3300021478	Soil	MSRFDEDTSTMRMRVAATPIELRKPELYPQSRPRGIAAGVLLGAIMWVAIITLAIAVWRWITG
Ga0210402_104019452	3300021478	Soil	MSRFDEDTSTMRMRLAATPIELRKPELYPQSRPRGIAVGVLLGAILWVAIITLAIAIWRWIAG
Ga0210402_105877082	3300021478	Soil	MSRFDEDTSIMRMRLAAAPIELHKREREPQPRARGIAAGVLLGAIMWAAIIMLGVAVWKWITA
Ga0224452_10464083	3300022534	Groundwater Sediment	MSRLDQDTSTMRMRLEATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGITVWR
Ga0224452_11559981	3300022534	Groundwater Sediment	TSTMRMRLEATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGIAVWRWLG
Ga0224452_12150052	3300022534	Groundwater Sediment	MSRFDQDTSTMRMRIENTLIELRKAEIGPQSKARGILVGAVLGVLAWAAIVTLCLAVWRWLE
Ga0207684_103382722	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLDQDTSTMRMRMEATPIELRKPEMGPQTKARGILVGALLGVAAWIAIIALGIAVWRLLS
Ga0207684_105779632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFDEDTSAMRMRIAATPIELRKPELGPQSKARGILVGVLLGAVAWVAIIALGVAVWKLLS
Ga0207684_110531783	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AFLGRGEFIMSLFDQDTSTMRMRIEATPIELRKPEIGPQSKARGILVGALLGLGAWAAIIALGVAVWRWFG
Ga0207684_116836991	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILVGVMLGAVMWVAIIALGVAVWRWLS
Ga0207693_110072591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FTMSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGIMFGALLGALAWAAIITLAMAVWRWLE
Ga0207646_100323963	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFDEDTSAMRMRIAATPIELRKPELGPQSKARGILVGVLLGAIAWVAIIALGVAVWKLLS
Ga0207646_110049521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLDQDTSTMRMRMEATPIELRKPEMGPQTKARGILVGALLGVAAWIAIIA
Ga0207644_107467512	3300025931	Switchgrass Rhizosphere	MSRFDEDTSIMRSRLAATPIELRKPELEPQTRARGIALGTLLGAVAWAMLLTVGWAAWQWMR
Ga0207703_108714682	3300026035	Switchgrass Rhizosphere	MSRFDEDTSIMRSRLAATPIELRKPELEPQSRARGIALGALLGALVWVAMLTLGWAVWQWMQ
Ga0209871_10143042	3300026217	Permafrost Soil	MSRFEDTSIMRARLNSTLIELRKPEIGPQSKARGILIGAILGLLAWFAIIAVFVELRRWM
Ga0209880_10910591	3300026271	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKSRGILFGAVLGVLAWAAIITLCLAVWRWLE
Ga0209235_12885151	3300026296	Grasslands Soil	MSRFDEDTSAMRMRIAATPIELRKPEMGPQSKARGILVGVMLGAIAWAVIIVLGVAVWRWLS
Ga0209055_13056212	3300026309	Soil	MSRFDEDTSAMRMRMAATPIELRKPELGPQSKARGILFGVLLGAVMWIAIIALGVAVWRWLS
Ga0209471_11028621	3300026318	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGAFAWAAIITLAMAVWR
Ga0209687_11456711	3300026322	Soil	MSRFDQDTSTMRMRMENTLIELRKPELGPQSKARGILVGALLGAFAWAAIITLAMAVWRWLA
Ga0209474_100808661	3300026550	Soil	FDEDTSAMRMRMAATPIELRKPEIGPQSKARGILVGVLLGAVAWAVIIVLGIAVWRWLS
Ga0209220_10420252	3300027587	Forest Soil	MSRFEDTSIMRMRIAATPIELRKPEPGPQSKARGIYVGALLGVGAWAAIIALGVAVWRWL
Ga0209117_10082202	3300027645	Forest Soil	MSRFDQDTSTMRMRMENTLIELRKPELAPQSKSRGILFGAVLGVLAWAAIIAFCLAVWRWLE
Ga0209011_10033241	3300027678	Forest Soil	MSMLDQDTSTMRMRMENTLIELRKPEIGPQSKARGIMVGVLLGVGAWAAIIALAVAMWRWLR
Ga0209011_10162421	3300027678	Forest Soil	STMRMRMENTLIELRKPELAPQSKARGILFGAVLGVLAWAAIIAFCLAVWRWLE
Ga0209011_11194221	3300027678	Forest Soil	MSRFDQDTSTMRMRMENTLIELRKPEIGPQSKASGILVGALLGAVAWAAIITLCMAVWRWLE
Ga0209048_100932854	3300027902	Freshwater Lake Sediment	VSRFDEDTSMMRMRVATIPIELRKQEHQPQPRARGIAIGALLGAIAWVAIIALGLAVWRWLAGL
Ga0137415_114750312	3300028536	Vadose Zone Soil	LSLLDQDTSTMRMRIEATPIELRKPEIGPQSKARGILVGAMLGLGAWAVIIALGIAVWRWLG
Ga0307504_100156802	3300028792	Soil	MSRLDEDTSAMRMRMAATPIELRKPELGPQSKARGILFGALLGAVMWIAIIALGVA
Ga0311333_113464582	3300030114	Fen	DENTSIMRLRQAATLIELRKPELEPQSRARGIANGVMLGVLMWAALVSIGAAVWWKIFE
Ga0307469_108020062	3300031720	Hardwood Forest Soil	LWEEELAMSRFDEDTSAMRMRIEATPIELRKPELGPQSKARGILVGVLLGAVAWAVIIILGVAVWRWLG
Ga0307469_112990501	3300031720	Hardwood Forest Soil	MSRLDQDTSTMRMRMEATPIELRKPEMGPQTKARGILVGALLGVAAWVAIIALGVAVWRWLG
Ga0307469_113898571	3300031720	Hardwood Forest Soil	SSGGGGFTMSMLDQDTSTMRMRLEATPIELRRPEIGPQSKARGIYVGVLLGAMAWLLIIALVLALWGLL
Ga0307471_1007504272	3300032180	Hardwood Forest Soil	MSRFDEDTSTMRMRLAAAPIELHKREREPQPRARGIAVGVLLGAIMWAAIIMLGVAVWRWITA
Ga0307471_1024369961	3300032180	Hardwood Forest Soil	MSRFDEDTSAMRMRMSATPIELRKPELGPQSKARGILVGVMLGAVMWVAIIALGVAVWKWLS
Ga0335085_106270752	3300032770	Soil	MSRFDEDTSTMRMRIAATPIELRKPESGPQPRARGILVGVLLGAAMWAAIIALGVAIWRWLS
Ga0364945_0091104_628_816	3300034115	Sediment	MSRLDQDTSTMRMRLAATPIELRKREMGPQTKARGILVGALLGVAAWVAIIALGIAVWRWLG
Ga0364934_0000759_6133_6321	3300034178	Sediment	MSRLDQDTSTMRMRIEATPIELRKPEMGPQSKARGILVGALLGVAAWAAIIAFGVVVWRWLS
Ga0364943_0053387_781_1011	3300034354	Sediment	LFRAATCFKEGEITMSRLDQDTSTMRMRLAATPIELRKREMGPQTKARGILVGALLGVAAWVAIIALGIAVWRWLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences