Metagenome Family F083850

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083850
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	58 residues
Representative Sequence	FVSSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGLPLPAGTR
Number of Associated Samples	97
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.607 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.821 % of family members)
Environment Ontology (ENVO)	Unclassified (53.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.14% β-sheet: 0.00% Coil/Unstructured: 67.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00190	Cupin_1	12.50
PF00486	Trans_reg_C	11.61
PF07676	PD40	3.57
PF02518	HATPase_c	3.57
PF13577	SnoaL_4	3.57
PF13620	CarboxypepD_reg	2.68
PF09335	SNARE_assoc	2.68
PF07883	Cupin_2	2.68
PF01436	NHL	1.79
PF12680	SnoaL_2	1.79
PF07228	SpoIIE	1.79
PF13683	rve_3	1.79
PF05787	DUF839	1.79
PF08238	Sel1	0.89
PF04209	HgmA_C	0.89
PF03150	CCP_MauG	0.89
PF03880	DbpA	0.89
PF13442	Cytochrome_CBB3	0.89
PF10604	Polyketide_cyc2	0.89
PF03466	LysR_substrate	0.89
PF01263	Aldose_epim	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.68
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.68
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.68
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.68
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	1.79
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.89
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.89
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.61 %
Unclassified	root	N/A	13.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.61 %
Unclassified	root	N/A	13.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.61 %
Unclassified	root	N/A	13.39 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.54 %
Unclassified	root	N/A	13.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.57 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.68 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.36 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	3.57 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.68 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.89 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.89 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.89 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.36 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3.57 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.68 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.89 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.89 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.36 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3.57 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.68 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.89 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.36 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3.57 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.68 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.89 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.89 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.36 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3.57 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.68 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.89 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.89 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_F5JHDJD02FRXY2	Not Available	503	Open in IMG/M
2140918013\|NODE_7770_length_1199_cov_9.049208	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11133297	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300000891\|JGI10214J12806_10452233	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300000956\|JGI10216J12902_101713308	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300000956\|JGI10216J12902_116014696	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300001139\|JGI10220J13317_10450804	Not Available	515	Open in IMG/M
3300005290\|Ga0065712_10514994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300005295\|Ga0065707_10841625	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300005331\|Ga0070670_100167903	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300005331\|Ga0070670_101273925	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005333\|Ga0070677_10626440	Not Available	598	Open in IMG/M
3300005334\|Ga0068869_101237225	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005338\|Ga0068868_100325841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300005343\|Ga0070687_100090619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1690	Open in IMG/M
3300005347\|Ga0070668_100386460	Not Available	1192	Open in IMG/M
3300005354\|Ga0070675_100446309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300005364\|Ga0070673_100271105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1486	Open in IMG/M
3300005365\|Ga0070688_101374264	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300005456\|Ga0070678_101058663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	748	Open in IMG/M
3300005457\|Ga0070662_100879040	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005457\|Ga0070662_101548999	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005459\|Ga0068867_100336914	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005540\|Ga0066697_10793290	Not Available	515	Open in IMG/M
3300005544\|Ga0070686_100149233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1636	Open in IMG/M
3300005578\|Ga0068854_101938060	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300005578\|Ga0068854_102201733	Not Available	510	Open in IMG/M
3300005719\|Ga0068861_102627727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300005834\|Ga0068851_10299671	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300005842\|Ga0068858_101480940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300005843\|Ga0068860_101260290	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300006050\|Ga0075028_100741845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	594	Open in IMG/M
3300006058\|Ga0075432_10065640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1298	Open in IMG/M
3300006846\|Ga0075430_100471123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300006846\|Ga0075430_100983391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	695	Open in IMG/M
3300006847\|Ga0075431_100375120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1427	Open in IMG/M
3300006852\|Ga0075433_11036822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	714	Open in IMG/M
3300006852\|Ga0075433_11497821	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006853\|Ga0075420_100250755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300006881\|Ga0068865_101352396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	635	Open in IMG/M
3300006914\|Ga0075436_101269131	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006969\|Ga0075419_10109470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1781	Open in IMG/M
3300009147\|Ga0114129_11450335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	845	Open in IMG/M
3300009162\|Ga0075423_12641730	Not Available	549	Open in IMG/M
3300009174\|Ga0105241_12325960	Not Available	534	Open in IMG/M
3300009176\|Ga0105242_11355060	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300009177\|Ga0105248_12914241	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300009177\|Ga0105248_13350813	Not Available	509	Open in IMG/M
3300009553\|Ga0105249_11527695	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009553\|Ga0105249_13411316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	511	Open in IMG/M
3300010304\|Ga0134088_10327349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	742	Open in IMG/M
3300010358\|Ga0126370_10619068	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300010361\|Ga0126378_10533299	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300010362\|Ga0126377_12805884	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300010376\|Ga0126381_101358488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300010403\|Ga0134123_10502416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300011119\|Ga0105246_12407714	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012212\|Ga0150985_106640421	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300012226\|Ga0137447_1127560	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012356\|Ga0137371_11227716	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012469\|Ga0150984_104818579	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300012512\|Ga0157327_1060814	Not Available	563	Open in IMG/M
3300012925\|Ga0137419_11836502	Not Available	519	Open in IMG/M
3300013297\|Ga0157378_11855172	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300014154\|Ga0134075_10044102	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300014326\|Ga0157380_10010947	All Organisms → cellular organisms → Bacteria	6541	Open in IMG/M
3300015371\|Ga0132258_10408758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3373	Open in IMG/M
3300015371\|Ga0132258_13757108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300015374\|Ga0132255_101603397	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300017659\|Ga0134083_10285292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	697	Open in IMG/M
3300018064\|Ga0187773_10236400	All Organisms → cellular organisms → Bacteria → Acidobacteria	991	Open in IMG/M
3300018067\|Ga0184611_1178391	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300018074\|Ga0184640_10484368	Not Available	546	Open in IMG/M
3300018076\|Ga0184609_10582886	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300019356\|Ga0173481_10827311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	515	Open in IMG/M
3300019362\|Ga0173479_10334299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	705	Open in IMG/M
3300019362\|Ga0173479_10382325	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300025905\|Ga0207685_10288466	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300025924\|Ga0207694_11556041	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300025925\|Ga0207650_10095960	All Organisms → cellular organisms → Bacteria → Proteobacteria	2274	Open in IMG/M
3300025925\|Ga0207650_10231360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1491	Open in IMG/M
3300025931\|Ga0207644_11499201	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300025933\|Ga0207706_10323154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1343	Open in IMG/M
3300025936\|Ga0207670_10078804	All Organisms → cellular organisms → Bacteria → Proteobacteria	2298	Open in IMG/M
3300025937\|Ga0207669_10558517	Not Available	925	Open in IMG/M
3300025940\|Ga0207691_10022042	All Organisms → cellular organisms → Bacteria	6010	Open in IMG/M
3300025960\|Ga0207651_10418426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1143	Open in IMG/M
3300025961\|Ga0207712_11166856	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300025961\|Ga0207712_11410002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	623	Open in IMG/M
3300025986\|Ga0207658_11796959	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300026023\|Ga0207677_10060546	All Organisms → cellular organisms → Bacteria → Proteobacteria	2617	Open in IMG/M
3300026023\|Ga0207677_12119216	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026095\|Ga0207676_11140066	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300026095\|Ga0207676_12250082	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300026116\|Ga0207674_11116729	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300026116\|Ga0207674_11600153	Not Available	620	Open in IMG/M
3300026121\|Ga0207683_11177433	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300026537\|Ga0209157_1326987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	555	Open in IMG/M
3300027680\|Ga0207826_1199743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300028597\|Ga0247820_10939523	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	615	Open in IMG/M
3300028884\|Ga0307308_10226600	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300031184\|Ga0307499_10323248	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	515	Open in IMG/M
3300031719\|Ga0306917_10441424	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1019	Open in IMG/M
3300031965\|Ga0326597_10226182	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300032001\|Ga0306922_11965775	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300032002\|Ga0307416_103574320	Not Available	520	Open in IMG/M
3300032003\|Ga0310897_10061061	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300032012\|Ga0310902_10800606	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300032017\|Ga0310899_10445860	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300032122\|Ga0310895_10385855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	683	Open in IMG/M
3300033433\|Ga0326726_10069822	All Organisms → cellular organisms → Bacteria	3100	Open in IMG/M
3300033481\|Ga0316600_11061128	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.04%
Environmental	Environmental	41.96%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.04%
Terrestrial	Environmental → Terrestrial	37.50%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.43%
Sediment	Environmental → Aquatic → Sediment	4.46%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.18%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_04051470	2070309009	Soil	QLNSIWQPDALANCAKVLRANGFTERELDLLLKINPAKILGIAPPATSAR
Iowa-Corn-GraphCirc_01139310	2140918013	Soil	AFVSSDTGQLNANWHPDALANAAKALRANGFTERELDLLFKINPAKILGITPPPNAAR
ICChiseqgaiiFebDRAFT_111332973	3300000363	Soil	AFVSSDTGQLNANWHPDALANAAKALRANGFTERELDLLFKINPAKILGITPPPNAAR*
JGI10214J12806_104522332	3300000891	Soil	VKQTIEGIRAAGVDHAFVSSDTGQINSVFQPDALAKCAKVLRANGFTEPELAKLFKVNPAKILGLTPPAGTQ*
JGI10216J12902_1017133083	3300000956	Soil	AAGVERAFVSSDTGQAGAAFQPDALANAARRLREQGFTERELDLLFKINPAAILGIAPPKE*
JGI10216J12902_1160146962	3300000956	Soil	GPEHAFISSDTGQLNSIWQPDALANCAKLLRANGFSERELDLLLKINPAKILGIPLPQTAGTR*
JGI10220J13317_104508042	3300001139	Soil	TGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKVNPAKILGLTPPAGTQ*
Ga0065712_105149942	3300005290	Miscanthus Rhizosphere	GQINSVFQPDALAKCAKVLRASGFTEPELAKLFKVNPAKILGLTPPAGTP*
Ga0065707_108416251	3300005295	Switchgrass Rhizosphere	HAFVSSDTGQINSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGISAPATGTK*
Ga0070670_1001679034	3300005331	Switchgrass Rhizosphere	VGPEHSFLSSDTGQLGSNWQPDALANCAKVLRANGFSEHELDLLLKINPAKILGIAPPAGTN*
Ga0070670_1012739251	3300005331	Switchgrass Rhizosphere	IDHAFVSSDTGQLNSVFQPDALAKCAKVLRASGFTEQELAKLFKINPAKILGLTPPA*
Ga0070677_106264401	3300005333	Miscanthus Rhizosphere	LNSNWQPDALANCAKVLRANGFTEAELDLLLKINPAKILGIAPPAAGTR*
Ga0068869_1012372252	3300005334	Miscanthus Rhizosphere	PEHSFISSDTGQLNSNWQPDALANCAKVLRANGFTEAELDLLLKINPAKILGIAPPAAGTR*
Ga0068868_1003258411	3300005338	Miscanthus Rhizosphere	SSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0070687_1000906191	3300005343	Switchgrass Rhizosphere	FVSSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGLPLPAGTR*
Ga0070668_1003864601	3300005347	Switchgrass Rhizosphere	QINSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPLPAGIK*
Ga0070675_1004463091	3300005354	Miscanthus Rhizosphere	TGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPLPAGTK*
Ga0070673_1002711053	3300005364	Switchgrass Rhizosphere	DHAFVSSDTGQLNSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0070688_1013742642	3300005365	Switchgrass Rhizosphere	AGVEHAFVSSDTGQINSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGISAPATGTK*
Ga0070678_1010586631	3300005456	Miscanthus Rhizosphere	GVDHSFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPQ*
Ga0070662_1008790402	3300005457	Corn Rhizosphere	EHAFISSDTGQLNSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGLTPPTLEQMGQGATAR*
Ga0070662_1015489992	3300005457	Corn Rhizosphere	EHSFISSDTGQLNSNWQPDALANCAKLLRANGFTEHELDLLLKINPAKILGIPLPAGIK*
Ga0068867_1003369141	3300005459	Miscanthus Rhizosphere	EHSFISSDTGQLNSNWQPDALANCAKLLRANGFTEHELDLLLKINPAKILGIPLPAGTK*
Ga0066697_107932901	3300005540	Soil	AFVSSDTGQLGSQFQPDALANCAKTLRNNGFTEHELDLLLKINPAKILGIPPPR*
Ga0070686_1001492333	3300005544	Switchgrass Rhizosphere	VDHAFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0068854_1019380602	3300005578	Corn Rhizosphere	GQINSVFQPDALAKCAKVLRANGFTEEELAKLFKVNPAKILGLAPPAGTR*
Ga0068854_1022017331	3300005578	Corn Rhizosphere	FISSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPPPQ*
Ga0068861_1026277271	3300005719	Switchgrass Rhizosphere	GVEHSFVDSDAGQAGTVYPPDALALAAQRLRANGFTEHELDLLFKINPAKIIGLTPPTLEQMGQGATAR*
Ga0068851_102996711	3300005834	Corn Rhizosphere	GVEHSFIDSDAGQAGTVYPPDALALAAQRLRANGFTERELDMLFKINPAKILGLTPPTLEMMGQGATK*
Ga0068858_1014809402	3300005842	Switchgrass Rhizosphere	AGVEHSFVDSDAGQAGTVFPPDALALAAQRLRANGFTEHELDLLFKINPAKIIGLTPPTLEQMGQGATAR*
Ga0068860_1012602903	3300005843	Switchgrass Rhizosphere	AGVEHSFVDSDAGQAGTVYPPDALALAAQRLRANGFTEHELDLLFKINPAKILGLTPPTLEQMGQGSTSK*
Ga0075028_1007418452	3300006050	Watersheds	VGQVGSNFVPDALLNVAKVLRANGFSEAELNQLFKINPAKILGIPPPAR*
Ga0075432_100656401	3300006058	Populus Rhizosphere	EHAFVSSDTGQLNSNWQPDALANCARVLRANGFTERELDLLFKINPAKILGLPLPAGTR*
Ga0075430_1004711232	3300006846	Populus Rhizosphere	QLNSNWQPDALANCAKVLRANGFTETELDLLFKINPARILGLAPPPGTGTR*
Ga0075430_1009833912	3300006846	Populus Rhizosphere	AFVSSDTGQLNSNWQPDALANAAKALRANGFTERELDLLLKINPAKILGITPPAGTR*
Ga0075431_1003751201	3300006847	Populus Rhizosphere	AFVSSDTGQLGSKFQPDALADAAKALRGQGFTERDIDLLLKINPAKILGIAPPSTSSR*
Ga0075433_110368221	3300006852	Populus Rhizosphere	QINSVFQPDALAKCAKVLRANGFTEQELAKLFKVNPAKILGLAPPAGTQ*
Ga0075433_114978212	3300006852	Populus Rhizosphere	GQINSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGIAPPPGTGTR*
Ga0075420_1002507553	3300006853	Populus Rhizosphere	QLNSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGIAPPPGTGTR*
Ga0068865_1013523961	3300006881	Miscanthus Rhizosphere	AGVDHSFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0075436_1012691312	3300006914	Populus Rhizosphere	ETIRLVGPEHSFVSSDTGQVNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIAAPTGTR*
Ga0075419_101094703	3300006969	Populus Rhizosphere	SSDTGQLNSNWQPDALANCAKVLRANGFTERELDLLLKINPAKILGIPPPPGAR*
Ga0114129_114503352	3300009147	Populus Rhizosphere	FISSDTGQLNSNWQPDALANCAKVLRANGFTERELDLLLKINPAKILGIPPPPGAR*
Ga0075423_126417302	3300009162	Populus Rhizosphere	FVSSDTGQINSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGISAPATGTK*
Ga0105241_123259601	3300009174	Corn Rhizosphere	DTGQINSVFQPDALAKCAKVLRASGFSEQELAKLFKINPAKILGLPLQ*
Ga0105242_113550602	3300009176	Miscanthus Rhizosphere	GIDHAFVSSDTGQINSVFQPDALAKCAKVLRASGFTEQELAKLFKINPAKILGLTPPS*
Ga0105248_129142412	3300009177	Switchgrass Rhizosphere	EHSFVDSDGGQARTVLPPDALAVAAQKLRANGFTEHELDLLFKINPAKILGLTPPTLEQMGQGSTSK*
Ga0105248_133508132	3300009177	Switchgrass Rhizosphere	TGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPQ*
Ga0105249_115276952	3300009553	Switchgrass Rhizosphere	GVDHAFVSSDTGQINSVFQPDALAKCAKVLRANGFTEEELAKLFKVNPAKILGLAPPAGTR*
Ga0105249_134113162	3300009553	Switchgrass Rhizosphere	DAGQAGTVFPPDALALAAQRLRANGFTERELDMLFKINPAKILGLTPPTLEMMGQGATR*
Ga0134088_103273491	3300010304	Grasslands Soil	SDTGQLNSDFQPDALAKWAKVLRANGFTEQELAKLFKINPAKILGLAPPAGTQ*
Ga0126370_106190681	3300010358	Tropical Forest Soil	QINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0126378_105332993	3300010361	Tropical Forest Soil	VERSFVSSDTGQVNSNWQPDALGNVAKTLRANGFTEHELDLLFKINPAKILGIAPPAGVQ
Ga0126377_128058842	3300010362	Tropical Forest Soil	AGVEHAFLSSDTGQVNRNWHPDLLANCAKTLRANGFTEHELDLLLKINPAKILGIAPPAGTQ*
Ga0126381_1013584881	3300010376	Tropical Forest Soil	AFVSTDTGQINSDFQPDALAKAAKTLRANGFSEQELTKLFKTNPAKILGLSLPVAN*
Ga0134123_105024162	3300010403	Terrestrial Soil	TGQLHSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGIAPPPGTGTR*
Ga0105246_124077141	3300011119	Miscanthus Rhizosphere	VEHSFVDSDAGQAGTVYPPDALALAAQRLRANGFTEHELDLLFKINPAKIIGLTPPTLEQMGQGATAR*
Ga0150985_1066404211	3300012212	Avena Fatua Rhizosphere	TGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0137447_11275601	3300012226	Soil	HAFVSSDTGQLNSVYQPDALAMAAKALRAQGFTERELDLLFRINPAKILGIAPPSTTSR*
Ga0137371_112277161	3300012356	Vadose Zone Soil	AGVEHSFVSSDTGQLGSPFQPDALAWAAQTLRKNGFSEHELDLLLKINPAKILGITAPSATATR*
Ga0150984_1048185791	3300012469	Avena Fatua Rhizosphere	HAFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0157327_10608141	3300012512	Arabidopsis Rhizosphere	QINSNWQPDALANCAKVLRANGFTEHELDLMLKINPAKILGIAAPAGTQ*
Ga0137419_118365022	3300012925	Vadose Zone Soil	VVTSDTGQLGSPFQPDALANCARVLRANGFTERELDMMFKINQAKILGIQPPSQ*
Ga0157378_118551722	3300013297	Miscanthus Rhizosphere	AFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0134075_100441021	3300014154	Grasslands Soil	VITSDTGQLNSLFQPDALANCAKVLRTNGFAERELDSMLKINPAKILGIAQPQ*
Ga0157380_1001094710	3300014326	Switchgrass Rhizosphere	GVEHSFVDSDAGQAGTVYPPDALALAAQRLRANGFTERELDLLFKINPAKILGLTPPTLEQMGQGATAK*
Ga0132258_104087583	3300015371	Arabidopsis Rhizosphere	GVEHAFISSDTGQLNSNWQPDALANFAQVLRANGFTEHELDLLLKINPAKILGIAPPAGTK*
Ga0132258_137571081	3300015371	Arabidopsis Rhizosphere	HSFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPGA*
Ga0132255_1016033971	3300015374	Arabidopsis Rhizosphere	FISSDTGQLNSNWQPDALANCAKLLRANGFTEHELDLLLKINPAKILGIPLPAGIK*
Ga0134083_102852921	3300017659	Grasslands Soil	SDTGQLGSPFQPDALANVARTLRKNGFTEHELDIMLKVNQAKILGIAPPPSR
Ga0187773_102364001	3300018064	Tropical Peatland	HAFIGTDVGQAGSNFVPDAMLNVAKTLRANGFTEGELDLLFKINPAKILGIPPPSTATR
Ga0184611_11783911	3300018067	Groundwater Sediment	IAAGVEHAFISTDTGQVGTNYVPDVLANAAKTLRANGFTEHEIDLLFKINPAKILGLAPPPGTK
Ga0184640_104843681	3300018074	Groundwater Sediment	DHAFVSSDTGQLNSVYQPDALAMAAKALRAQGFTERELDLLLRINPAKILGIAPPPTASR
Ga0184609_105828861	3300018076	Groundwater Sediment	HAFVSSDTGQINSVFQPDALAKCAKVLRASGFTEPELAKLFKVNPAKILGLAPPAGTQ
Ga0173481_108273112	3300019356	Soil	TIRLVGPEHSFLSSDTGQLGSNWQPDALANCAKVLRANGFSEHELDLLLKINPAKILGIRPPAGTN
Ga0173479_103342992	3300019362	Soil	HSFLSSDTGQLGSNWQPDALANCAKVLRANGFSEHELDLLLKINPAKILGIAPPAGTN
Ga0173479_103823251	3300019362	Soil	QLNSNWQPDALANCAKVLRANGFTEAELDLLLKINPAKILGIAPPAAGTR
Ga0207685_102884662	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPQ
Ga0207694_115560411	3300025924	Corn Rhizosphere	AGVDHSFVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPPG
Ga0207650_100959601	3300025925	Switchgrass Rhizosphere	KLYLETIRLVGPEHSFISSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPLPAGTK
Ga0207650_102313603	3300025925	Switchgrass Rhizosphere	GVDHAVITSDTGQLNSLFQPDALANCAKVLRANGFTDRDLDIMLKINPAKILGIAPPQ
Ga0207644_114992011	3300025931	Switchgrass Rhizosphere	SDAGQAGTVFPPDALALAAQRLRANGFTERELDLLFKINPAKILGLTPPTLEQMGQGATA
Ga0207706_103231541	3300025933	Corn Rhizosphere	HSFISSDTGQLNSNWQPDALANCAKLLRANGFTEHELDLLLKINPAKILGIPLPAGIK
Ga0207670_100788041	3300025936	Switchgrass Rhizosphere	RLVGPEHSFISSDTGQINSNWQPDALANCAKVLRANGFTEHELDLMLKINPAKILGIAAPAGTQ
Ga0207669_105585171	3300025937	Miscanthus Rhizosphere	AGVEHSFVDSDAGQAGTVYPPDALALAAQRLRANGFTEHELDLLFKINPAKILGLTPPTLEQMGQGSTSR
Ga0207691_100220429	3300025940	Miscanthus Rhizosphere	SFVDSDAGQAGTVYPPDALALAAQRLRANGFTERELDLLFKINPAKILGLTPPTLEQMGQGATAK
Ga0207651_104184261	3300025960	Switchgrass Rhizosphere	QLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGLSLPAGTR
Ga0207712_111668562	3300025961	Switchgrass Rhizosphere	QINSVFQPDALAKCAKVLRANGFTEPELAKLFKVNPAKILGLSPPAGTQ
Ga0207712_114100022	3300025961	Switchgrass Rhizosphere	FVSSDTGQINSVFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLTPPA
Ga0207658_117969591	3300025986	Switchgrass Rhizosphere	QLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGLPLPAGTR
Ga0207677_100605461	3300026023	Miscanthus Rhizosphere	SFISSDTGQINSNWQPDALANCAKVLRANGFTEHELDLMLKINPAKILGIAAPAGTQ
Ga0207677_121192162	3300026023	Miscanthus Rhizosphere	AFVSSDTGQINSVFQPDALAKCAKVLRANGFTEEELAKLFKVNPAKILGLAPPAGTR
Ga0207676_111400662	3300026095	Switchgrass Rhizosphere	SDTGQINSNWQPDALANCAKVLRANGFTERELDLLFKVNPAKILGIARPAGTQ
Ga0207676_122500822	3300026095	Switchgrass Rhizosphere	QTFAGIRAAGIDHAFVSSDTGQINSVFQPDALAKCAKVLRANGFTEPELAKLFKVNPAKILGLTPPAGTQ
Ga0207674_111167291	3300026116	Corn Rhizosphere	DTGQINSVFQPDALAKCAKVLRANGFTEPELAKLFKVNPAKILGLTPPAGTQ
Ga0207674_116001532	3300026116	Corn Rhizosphere	EHSFISSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPLPAGTK
Ga0207683_111774331	3300026121	Miscanthus Rhizosphere	GVEHAFVSSDTGQINSNWQPDALANCAKVLRANGFTERELDLLFKINPAKILGIAPPPGTGTR
Ga0209157_13269871	3300026537	Soil	VDHAFVSSDTGQLNSDFQPDALAKCAKVLRANGFTEQELAKLFKINPAKILGLAPPAGTQ
Ga0207826_11997432	3300027680	Tropical Forest Soil	SDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPPPEGTR
Ga0247820_109395232	3300028597	Soil	AFVSSDTGQAGAAFQPDALANAARALRAQGFTERELDLLFKINPAKILGIAPPAGTGTK
Ga0307308_102266003	3300028884	Soil	QINSVFQPDALAKCAKVLRANGFTEQELAKLFKVNPAKILGLTPPPGA
Ga0307499_103232482	3300031184	Soil	LETIRLVGPEHSFISSDTGQLNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIAPPPGTR
Ga0306917_104414242	3300031719	Soil	QINSDFQPDALAKAAKTLRANGFTEQELAKLFKINPAKILGLTPPPGA
Ga0326597_102261821	3300031965	Soil	DTGQMNSKFQPDALAEAAEALRGQGFTEHELGLLFKINPAKILGLMPPAMSQ
Ga0306922_119657751	3300032001	Soil	GVDHAFVSTDTGQINSDFQPDALAKAAKTLRANGFTEQELAKLFKVNPAKILGLTPPQ
Ga0307416_1035743201	3300032002	Rhizosphere	TGQLNSNWQPDALANCAKVLRANGFTEQELDLLLKINPAKILGLAPPAGTR
Ga0310897_100610613	3300032003	Soil	LNSNWQPDALANCAKVLRANGFTEHELDLLLKINPAKILGIPLPAGTK
Ga0310902_108006061	3300032012	Soil	GQLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGLPLPAGTR
Ga0310899_104458602	3300032017	Soil	GQLNSNWQPDALANCAKVLRANGFTEHELDLLFKINPAKILGIAPPPGT
Ga0310895_103858551	3300032122	Soil	GQLGSNWQPDALANCAKVLRANGFSEHELDLLLKINPAKILGIRPPAGTN
Ga0326726_100698225	3300033433	Peat Soil	EGIRAAGVDHSFVSSDTGQINSVFQPDALAKCAKVLRANGFTELELAKLFKINPAKILGLTPPPGA
Ga0316600_110611281	3300033481	Soil	EVVKLYLETIRSVGPDHAFISSDTGQLNSNWQPDALANCAKLLRANGFTEHELDLLFKINPAKILGIAPPAGTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083850

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences