Metagenome / Metatranscriptome Family F083897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083897
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	72 residues
Representative Sequence	MSEDIANLKPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDRDGEIGIYFLDMRCALCDSLAVAPMPEWKN
Number of Associated Samples	71
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.34 %
% of genes near scaffold ends (potentially truncated)	20.54 %
% of genes from short scaffolds (< 2000 bps)	54.46 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.750 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (30.357 % of family members)
Environment Ontology (ENVO)	Unclassified (83.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (84.821 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.07% β-sheet: 14.14% Coil/Unstructured: 78.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF12705	PDDEXK_1	25.89
PF13481	AAA_25	11.61
PF05257	CHAP	8.93
PF02467	Whib	1.79
PF13252	DUF4043	1.79
PF12850	Metallophos_2	0.89
PF07659	DUF1599	0.89
PF00535	Glycos_transf_2	0.89
PF13362	Toprim_3	0.89
PF00877	NLPC_P60	0.89
PF01391	Collagen	0.89
PF13392	HNH_3	0.89
PF08281	Sigma70_r4_2	0.89
PF02195	ParBc	0.89
PF02945	Endonuclease_7	0.89
PF01510	Amidase_2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
All Organisms	root	All Organisms	31.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Viruses	superkingdom	All Organisms → Viruses	20.54 %
cellular organisms	root	All Organisms → cellular organisms	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.71 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.14 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.14 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.79 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.14 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	1.79 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.14 %
Salinispora tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	1.79 %
Nocardioides massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides massiliensis	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c001381	All Organisms → Viruses → Predicted Viral	4191	Open in IMG/M
3300000203\|TB18AUG2009E_c006862	Not Available	1549	Open in IMG/M
3300002091\|JGI24028J26656_1000795	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8506	Open in IMG/M
3300002091\|JGI24028J26656_1002181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	3761	Open in IMG/M
3300002091\|JGI24028J26656_1008013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1406	Open in IMG/M
3300002091\|JGI24028J26656_1016099	Not Available	798	Open in IMG/M
3300002091\|JGI24028J26656_1016623	Not Available	777	Open in IMG/M
3300002091\|JGI24028J26656_1016833	Not Available	770	Open in IMG/M
3300002091\|JGI24028J26656_1019773	Not Available	677	Open in IMG/M
3300002092\|JGI24218J26658_1001089	Not Available	9389	Open in IMG/M
3300002092\|JGI24218J26658_1002738	Not Available	4368	Open in IMG/M
3300002092\|JGI24218J26658_1002759	Not Available	4344	Open in IMG/M
3300002092\|JGI24218J26658_1018360	Not Available	983	Open in IMG/M
3300002092\|JGI24218J26658_1020571	Not Available	898	Open in IMG/M
3300002098\|JGI24219J26650_1000684	Not Available	12608	Open in IMG/M
3300002098\|JGI24219J26650_1002142	All Organisms → cellular organisms → Bacteria	5302	Open in IMG/M
3300002301\|JGI24891J29808_1007998	Not Available	1028	Open in IMG/M
3300003375\|JGI26470J50227_1006943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3024	Open in IMG/M
3300003375\|JGI26470J50227_1015308	Not Available	1798	Open in IMG/M
3300003783\|Ga0007850_1009049	Not Available	812	Open in IMG/M
3300003798\|Ga0007842_1012710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	544	Open in IMG/M
3300003809\|Ga0007869_1004508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1675	Open in IMG/M
3300003820\|Ga0007863_1001867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2744	Open in IMG/M
3300004095\|Ga0007829_10008437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides massiliensis	1977	Open in IMG/M
3300004448\|Ga0065861_1005634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4932	Open in IMG/M
3300004448\|Ga0065861_1013421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	3550	Open in IMG/M
3300004448\|Ga0065861_1198769	Not Available	747	Open in IMG/M
3300004460\|Ga0066222_1016534	Not Available	8580	Open in IMG/M
3300004460\|Ga0066222_1109795	Not Available	739	Open in IMG/M
3300004460\|Ga0066222_1403101	Not Available	550	Open in IMG/M
3300004461\|Ga0066223_1007034	Not Available	2026	Open in IMG/M
3300004685\|Ga0065177_1000342	Not Available	7822	Open in IMG/M
3300006071\|Ga0007876_1000088	Not Available	38989	Open in IMG/M
3300006071\|Ga0007876_1004574	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4198	Open in IMG/M
3300006072\|Ga0007881_1001633	Not Available	8468	Open in IMG/M
3300006103\|Ga0007813_1001028	Not Available	9099	Open in IMG/M
3300006118\|Ga0007859_1124024	Not Available	508	Open in IMG/M
3300006119\|Ga0007866_1003823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3732	Open in IMG/M
3300006122\|Ga0007837_1024225	Not Available	1031	Open in IMG/M
3300006123\|Ga0007852_1038692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300006805\|Ga0075464_10058762	All Organisms → Viruses → Predicted Viral	2143	Open in IMG/M
3300009151\|Ga0114962_10007775	Not Available	8120	Open in IMG/M
3300009151\|Ga0114962_10026859	All Organisms → Viruses → Predicted Viral	3993	Open in IMG/M
3300009151\|Ga0114962_10119385	All Organisms → Viruses → Predicted Viral	1619	Open in IMG/M
3300009151\|Ga0114962_10268095	Not Available	966	Open in IMG/M
3300009151\|Ga0114962_10677301	Not Available	529	Open in IMG/M
3300009152\|Ga0114980_10000252	Not Available	37917	Open in IMG/M
3300009154\|Ga0114963_10002412	Not Available	12831	Open in IMG/M
3300009154\|Ga0114963_10472101	Not Available	671	Open in IMG/M
3300009182\|Ga0114959_10050295	Not Available	2422	Open in IMG/M
3300009183\|Ga0114974_10233009	Not Available	1109	Open in IMG/M
3300009186\|Ga0114965_11253	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300009684\|Ga0114958_10501745	Not Available	583	Open in IMG/M
3300010157\|Ga0114964_10001529	Not Available	16796	Open in IMG/M
3300010157\|Ga0114964_10158251	Not Available	1099	Open in IMG/M
3300010157\|Ga0114964_10453896	Not Available	604	Open in IMG/M
3300010158\|Ga0114960_10079258	Not Available	1867	Open in IMG/M
3300010158\|Ga0114960_10498364	Not Available	585	Open in IMG/M
3300010885\|Ga0133913_10003536	Not Available	39231	Open in IMG/M
3300010885\|Ga0133913_10306373	All Organisms → Viruses → Predicted Viral	4209	Open in IMG/M
3300010885\|Ga0133913_11913245	All Organisms → Viruses → Predicted Viral	1478	Open in IMG/M
3300012686\|Ga0157560_1036684	Not Available	7224	Open in IMG/M
3300013093\|Ga0164296_1021343	Not Available	4012	Open in IMG/M
3300013093\|Ga0164296_1274602	Not Available	634	Open in IMG/M
3300013094\|Ga0164297_10030181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3047	Open in IMG/M
3300013285\|Ga0136642_1025990	All Organisms → Viruses → Predicted Viral	1687	Open in IMG/M
3300013285\|Ga0136642_1036838	Not Available	1374	Open in IMG/M
3300020686\|Ga0214194_103604	Not Available	1529	Open in IMG/M
3300020710\|Ga0214198_1000036	Not Available	42432	Open in IMG/M
3300020716\|Ga0214207_1001093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6817	Open in IMG/M
3300020731\|Ga0214170_1033602	Not Available	807	Open in IMG/M
3300020733\|Ga0214172_1000125	Not Available	41958	Open in IMG/M
3300021131\|Ga0214206_1010401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1335	Open in IMG/M
3300021139\|Ga0214166_1000339	Not Available	24517	Open in IMG/M
3300021139\|Ga0214166_1001475	All Organisms → cellular organisms → Bacteria	10140	Open in IMG/M
3300021139\|Ga0214166_1031118	Not Available	1263	Open in IMG/M
3300021438\|Ga0213920_1000435	Not Available	33873	Open in IMG/M
3300021438\|Ga0213920_1003402	Not Available	6758	Open in IMG/M
3300022591\|Ga0236341_1001993	Not Available	10849	Open in IMG/M
3300022591\|Ga0236341_1021611	Not Available	1952	Open in IMG/M
3300025336\|Ga0208619_104272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1037	Open in IMG/M
3300025366\|Ga0208505_1013765	Not Available	1147	Open in IMG/M
3300025381\|Ga0208871_1038097	Not Available	667	Open in IMG/M
3300025383\|Ga0208250_1000054	Not Available	41479	Open in IMG/M
3300025389\|Ga0208257_1044020	Not Available	636	Open in IMG/M
3300025401\|Ga0207955_1000737	All Organisms → cellular organisms → Bacteria	9101	Open in IMG/M
3300025407\|Ga0208378_1000098	Not Available	32562	Open in IMG/M
3300025416\|Ga0208877_1057359	Not Available	622	Open in IMG/M
3300025598\|Ga0208379_1003026	Not Available	5905	Open in IMG/M
3300025896\|Ga0208916_10110422	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300027708\|Ga0209188_1026177	All Organisms → Viruses → Predicted Viral	2871	Open in IMG/M
3300027708\|Ga0209188_1061030	Not Available	1632	Open in IMG/M
3300027712\|Ga0209499_1205076	Not Available	697	Open in IMG/M
3300027741\|Ga0209085_1012208	Not Available	4268	Open in IMG/M
3300027741\|Ga0209085_1148961	Not Available	990	Open in IMG/M
3300027747\|Ga0209189_1112795	Not Available	1202	Open in IMG/M
3300027749\|Ga0209084_1016018	Not Available	4215	Open in IMG/M
3300027749\|Ga0209084_1070585	All Organisms → Viruses → Predicted Viral	1609	Open in IMG/M
3300027749\|Ga0209084_1123105	All Organisms → Viruses → Predicted Viral	1115	Open in IMG/M
3300027749\|Ga0209084_1140213	Not Available	1023	Open in IMG/M
3300027777\|Ga0209829_10000422	Not Available	39207	Open in IMG/M
3300027896\|Ga0209777_10049042	Not Available	3835	Open in IMG/M
3300027896\|Ga0209777_10378204	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1071	Open in IMG/M
3300027896\|Ga0209777_10405985	Not Available	1024	Open in IMG/M
3300027973\|Ga0209298_10000184	Not Available	38850	Open in IMG/M
3300028392\|Ga0304729_1003148	Not Available	9459	Open in IMG/M
3300028393\|Ga0304728_1178657	Not Available	750	Open in IMG/M
3300031759\|Ga0316219_1149483	Not Available	864	Open in IMG/M
3300031884\|Ga0316220_1065233	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1448	Open in IMG/M
3300032560\|Ga0316223_1213379	Not Available	611	Open in IMG/M
3300032579\|Ga0316228_1079790	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300032668\|Ga0316230_1281078	Not Available	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.96%
Marine	Environmental → Aquatic → Marine	8.04%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	52.68%
Lake	Environmental → Aquatic → Freshwater → Lake	37.50%
Coastal	Environmental → Aquatic → Marine → Coastal	8.04%
Creek	Environmental → Aquatic → Freshwater → Creek	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	34.82%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.04%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.46%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	30.36%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	21.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	13.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	9.82%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	4.46%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.57%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.68%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.79%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009186	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012686	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES055 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025416	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB18AUG2009E_0013819	3300000203	Freshwater	MSEDIANLKPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDRDGEIGIYFLDMRCALCDSLAVAPMPEWKK*
TB18AUG2009E_0068622	3300000203	Freshwater	MDDIANLRPTLGSEMDYRNLGPVRVCPCGSDLWNVKCKFDTDGEIGIYFLDMRCALCDSLAVAPMPKLEEL*
JGI24028J26656_10007956	3300002091	Lentic	MAEDIANLRPTSGTEGDYRSLGPIRICPCDSDIWDVKCKFDDDGEIGLYFLDMRCALCGSLAVAPVPDWDY*
JGI24028J26656_10021817	3300002091	Lentic	MDDIANLKPTKGHESDYRILGPLRVCPCGSDLWSVKCKFDTDGEIGIYFLDMNCALCDSQAVAPMPDWKTNGS*
JGI24028J26656_10080134	3300002091	Lentic	MAEDIANLRATKGQEGDYRSLGPIRVCPXGSDLWDVKCKFDEDGELGIYFLDMRCSSCGSLAIAPMPEWKL*
JGI24028J26656_10160992	3300002091	Lentic	VAEDIANLKATPGQEGDYRSXGPIRVCPCGSDLWNVKCKFDDENVLGIYFLDMRCALCDXLAVAPMPEWGN*
JGI24028J26656_10166233	3300002091	Lentic	MAKDIAYLKPVPGNEGDYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAVAPMPDWKTQ*
JGI24028J26656_10168331	3300002091	Lentic	MEDIANLRPTPGLEGDYRSLGPIRVCPCGSDIWAVKCKFDRDGEIGIYFLDMRCALCDSLAVA
JGI24028J26656_10197733	3300002091	Lentic	MEEIANLKPTPGQEADYRSLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDVNCALCGSLAVAVTPPLG*
JGI24218J26658_10010895	3300002092	Lentic	MEDIANLRPTPGLEGDYRSLGPIRVCPCGSDIWAVKCKFDRDGEIGIYFLDMRCALCDSLAVAPMPKLEEL*
JGI24218J26658_10027388	3300002092	Lentic	VDDIANLKPTKGHESDYRILGPLRVCPCGSDLWSVKCKFDTDGEIGIYFLDMNCALCDSQAVAPMPDWKTNGS*
JGI24218J26658_10027599	3300002092	Lentic	VAEDIXNLKATPGQEGDYRSLGPIRVCPCGSDLWNVKCKFDDENVLGIYFLDMRCALCDSLAVAPMPEWGN*
JGI24218J26658_10183602	3300002092	Lentic	MAEDIANLRATKGQEGDYRSLGPIRVCPCGSDLWDVKCKFDEDGELGIYFLDMRCSSCGSLAIAPMPEWKL*
JGI24218J26658_10205713	3300002092	Lentic	MSEDIANLRPTKGQEGDYRSLGPIRICPCGSDLWDVKCKFDTDGELGIYFLDMRCSLCDSLAVAPMPNLGRDY*
JGI24219J26650_100068418	3300002098	Lentic	VDDIANLKPTSGQEADYRSLGPIRICPCGSDIWNVKCKFDEDFEIGMYFTDAHCASXGSVATVVTSLDKE*
JGI24219J26650_10021424	3300002098	Lentic	VAEDIANLKATPGQEGDYRSLGPIRVCPCGSDLWNVKCKFDDENVLGIYFLDMRCALCDSLAVAPMPEWGN*
JGI24891J29808_10079982	3300002301	Lentic	MSKDIANLKPTSGTEADYRSLGPISVCPCGSDLWNVKCKFDSDGELGIYFLDMRCALCDSLAVAPMPKLAN*
JGI26470J50227_10069435	3300003375	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
JGI26470J50227_10153082	3300003375	Freshwater	MSKEIADLRATPGAEADYRSLGPIRICPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMPGWKQ*
Ga0007850_10090493	3300003783	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDXWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0007842_10127102	3300003798	Freshwater	MSEDIANLRPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDNDGEIGIYFLDMRCALCDSLAVAPMPEWKK*
Ga0007869_10045082	3300003809	Freshwater	MDDIANIKPTTGAEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPLGESHG*
Ga0007863_10018676	3300003820	Freshwater	MSEDIANLXPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDSDGEIGIYFLDMRCALCDSLAVAPMPEWKK*
Ga0007829_100084375	3300004095	Freshwater	DDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0065861_10056344	3300004448	Marine	MAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDEDGAIGIYFLDMRCLLCDSLAVAPYEGNLT*
Ga0065861_10134214	3300004448	Marine	MAEDIANLRAAKGQEGDYRLLGPIRVCPCGSDLWDVKCKFDEDGELGIYFLDMRCSLCGSLAVAPMPEWKR*
Ga0065861_11987693	3300004448	Marine	MAEDIANLKATPGQEGDYRSLGPIRICPCGSDLWNVKCKFDDDNVLGIYFLDMRCALCDSLAVAPMPEWGN*
Ga0066222_10165342	3300004460	Marine	MAKDIAYVKPSKGNEGDYRSLGPIRVCPCGSDTWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL*
Ga0066222_11097951	3300004460	Marine	MAEDIANLKATPGQEGDYRSLGPIRICPCGSDLWNVKCKFDDDNVLGIYFLDMRCALCDS
Ga0066222_14031011	3300004460	Marine	MAEDIANLKATPGQEGDYRSLGPIRICPCGSDLWNVKCKFDDDNVLGIYFLDMRCALCDSLSVAPMPEWGN*
Ga0066223_10070343	3300004461	Marine	MAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDEDGAISIYFLDMRCLLCDSLAVAPYEGNLT*
Ga0065177_10003425	3300004685	Freshwater	MSNEIADLRATPGSEADYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAVAPMPKLDN*
Ga0007876_100008819	3300006071	Freshwater	MSNEIADLRATPGSEADYRSLGPISICPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAVAPMPKLDN*
Ga0007876_10045748	3300006071	Freshwater	MSEDIANLRPTPGAEMDYRNLGPVRVCPCGSDLWNVKCKFDNDGEIGIYFLDMRCALCDSLAVAPMPEWKK*
Ga0007881_100163320	3300006072	Freshwater	EADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG
Ga0007813_10010289	3300006103	Freshwater	MDDIANLKPTTGTEADYRNLGPIKVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0007859_11240242	3300006118	Freshwater	MDDIANIKPTTGAEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPIGESHG*
Ga0007866_10038239	3300006119	Freshwater	VRAGVVMDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0007837_10242252	3300006122	Freshwater	MYDIANLKPTTGTEADYRNLGPIRVFPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVMPPLGESHG*
Ga0007852_10386921	3300006123	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFNDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0075464_100587625	3300006805	Aqueous	MAKDIAYLKPVPGNEGDYRSLGPLRICPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAVAPMPDWKTQ*
Ga0114962_1000777511	3300009151	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPLRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGNLT*
Ga0114962_100268593	3300009151	Freshwater Lake	MAKDIAYLKAVPGNEGDYRALGPLRICPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAVAPMPDWKTQ*
Ga0114962_101193853	3300009151	Freshwater Lake	MAEEIANIKPTSGQEADYRSLGPIRICPCGSDLWDVKCKFDDDGELGIYFLDMRCALCSSIAVAPIPKLGD*
Ga0114962_102680953	3300009151	Freshwater Lake	FYSTSLKKRMAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSEVWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL*
Ga0114962_106773012	3300009151	Freshwater Lake	FYSTSLKKRMAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSDTWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL*
Ga0114980_1000025221	3300009152	Freshwater Lake	MAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCLLCDSLAVAPYEGNLT*
Ga0114963_100024121	3300009154	Freshwater Lake	GTVLVDEIANLKPTKGQEGDYRSLGPIRVCFCGSEIWSVKCKFDTDGEIGLYFLDMNCALCDSQAVAPMPDWKTNGS*
Ga0114963_104721011	3300009154	Freshwater Lake	MAEDIANLKATPGQEGDYRSLGPIRVCPCGSDLWNVKCKFDNDNVLGIYFLDMRCALCDSLAVAPMPEWGN*
Ga0114959_100502951	3300009182	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPLRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYE
Ga0114974_102330093	3300009183	Freshwater Lake	MRKRMAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCLLCDSLAVAPYEGNLT*
Ga0114965_112532	3300009186	Freshwater Lake	MAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSDTWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL*
Ga0114958_105017452	3300009684	Freshwater Lake	MAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSEVWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL*
Ga0114964_1000152921	3300010157	Freshwater Lake	MAEDIANLKPTPGQEADYRSLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDVNCALCNSLAVAVTPPLGESRDV*
Ga0114964_101582512	3300010157	Freshwater Lake	MAKDIAYVKPDKGGEGDYRAIGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCLLCDSLAVAPYEGNLT*
Ga0114964_104538962	3300010157	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPIRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGNLT*
Ga0114960_100792586	3300010158	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPLRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGN
Ga0114960_104983643	3300010158	Freshwater Lake	MSKDIANLKPTKGQEGDYRSLGPIRVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLA
Ga0133913_1000353625	3300010885	Freshwater Lake	MAKNISDLKATPGSEADYRGLGPIRVCPCGSDLWNVKCKFDEDNEIGIYFLDMNCALCDSAATSPTPEGRL*
Ga0133913_103063738	3300010885	Freshwater Lake	MNHHSRMAEDIANLKPTPGQEADYRSLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDVNCALCNSLAVAVTPPLGESRDV*
Ga0133913_119132454	3300010885	Freshwater Lake	YPFRMAEEIANIKPTKGQEGDYRSLGPIRVCPCGSDLWDVKSKFDEDGELGIYFLDMRCALCGSLAVAPMPEWRK*
Ga0157560_10366842	3300012686	Freshwater	MSNEIADLRATPGSEADYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAVAPMPKLDE*
Ga0164296_10213433	3300013093	Freshwater	MSNEIADLRATPGSEADYRSLGPISVCPCGSDLWNVKCKFDDDGALGIYFLDMRCALCDSLAVAPMPKLDE*
Ga0164296_12746023	3300013093	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDEDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0164297_100301815	3300013094	Freshwater	MDDIANLKSTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG*
Ga0136642_10259902	3300013285	Freshwater	MAKDIAYLKPVPGNEGDYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAIAPMPDWKTK*
Ga0136642_10368382	3300013285	Freshwater	MAEDIANLKATPGQEGDYRSLGPIRVCPCGSDLWNVKCKFDDENVLGIYFLDMRCALCDSLAVAPMPEWGH*
Ga0214194_1036042	3300020686	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG
Ga0214198_100003624	3300020710	Freshwater	MDDIANIKPTTGAEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPLGESHG
Ga0214207_10010932	3300020716	Freshwater	MEDIANLKPTPGSEMDYRSLGPVRVCPCGSDLWSVKCKFDTDGEIGIYFLDMRCALCDSMAVAPMPKLEEL
Ga0214170_10336022	3300020731	Freshwater	MSKEIADLRATPGAEADYRSLGPIRICPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMPGWKQ
Ga0214172_100012555	3300020733	Freshwater	MSNEIADLRATPGSEADYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAVAPMPKLDE
Ga0214206_10104012	3300021131	Freshwater	MSEDIANLRPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDNDGEIGIYFLDMRCALCDSLAVAPMPEWKK
Ga0214166_100033939	3300021139	Freshwater	MDDIANLRPTLGSEMDYRNLGPVRVCPCGSDLWNVKCKFDTDGEIGIYFLDMRCALCDSLAVAPMPKLEEL
Ga0214166_10014757	3300021139	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPLGESHG
Ga0214166_10311183	3300021139	Freshwater	MSEDIANLKPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDSDGEIGIYFLDMRCALCDSLAVAPMPEWKK
Ga0213920_100043510	3300021438	Freshwater	MAKDIAYVKPDKGQEGDYRSLGPIRVCPCGSDTWNVKCKFDEDGTIGIYFLDMRCLLCDSLAVAPYEGQLNV
Ga0213920_10034027	3300021438	Freshwater	MAEDIAYVKPDKGREGDYRALGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCMLCDSLAVAPYEGNLK
Ga0236341_100199311	3300022591	Freshwater	MSKDIAYLKPVKNQEGDYRSLGPISVCPCGSDLWNVKCKFDTDGELGIYFLDMRCALCDSLAIAPMPTLN
Ga0236341_10216114	3300022591	Freshwater	MDDIANIKPTTGTEADYRALGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPLGESHG
Ga0208619_1042722	3300025336	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDVWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG
Ga0208505_10137651	3300025366	Freshwater	MSNEIADLRATPGSEADYRSLGPISVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLA
Ga0208871_10380971	3300025381	Freshwater	RLSVLLVLVGVVMDDIANLKPTTGTEADYRNLGPIKVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG
Ga0208250_100005435	3300025383	Freshwater	MSNEIADLRATPGSEADYRSLGPISICPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAVAPMPKLDN
Ga0208257_10440201	3300025389	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESH
Ga0207955_10007379	3300025401	Freshwater	MDDIANLKPTTGTEADYRNLGPIKVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPPLGESHG
Ga0208378_100009843	3300025407	Freshwater	MSEDIANLRPTPGAEMDYRNLGPVRVCPCGSDLWNVKCKFDNDGEIGIYFLDMRCALCDSLAVAPMPEWKK
Ga0208877_10573593	3300025416	Freshwater	MDDIANLKPTTGTEADYRNLGPIKVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAIAVTPPLGE
Ga0208379_10030265	3300025598	Freshwater	MDDIANLKPTTGTEADYRNLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVMPPLGESHG
Ga0208916_101104223	3300025896	Aqueous	MAKDIAYLKPVPGNEGDYRSLGPLRICPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAVAPMPDWKTQ
Ga0209188_10261775	3300027708	Freshwater Lake	MSKDIANLKPTKGQEGDYRSLGPIRVCPCGSDLWNVKCKFDDDGELGIYFLDMRCALCDSLAIAPIPNLGRDC
Ga0209188_10610302	3300027708	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPLRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGNLT
Ga0209499_12050761	3300027712	Freshwater Lake	MAKDIAYVKPNEGGEGDYRALGPIRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGNLT
Ga0209085_10122081	3300027741	Freshwater Lake	GTVLVDEIANLKPTKGQEGDYRSLGPIRVCFCGSEIWSVKCKFDTDGEIGLYFLDMNCALCDSQAVAPMPDWKTNGS
Ga0209085_11489611	3300027741	Freshwater Lake	LRKRMAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCLLCDSLAVAPYEGNLT
Ga0209189_11127952	3300027747	Freshwater Lake	MAKDIAYVKPSEGGEGDYRALGPLRVCPCGSEVWNVKCKFDDDGAIGIYFLDMRCMLCDSLAVAPYEGNLT
Ga0209084_10160183	3300027749	Freshwater Lake	VDEIANLKPTKGQEGDYRILGPIRVCPCGSDLWSVKCKFDTDGEIGIYFLDMNCALCDSQAVAPMPDWKTNGS
Ga0209084_10705854	3300027749	Freshwater Lake	MAEEIANIKPTSGQEADYRSLGPIRICPCGSDLWDVKCKFDDDGELGIYFLDMRCALCSSIAVAPIPKLGD
Ga0209084_11231053	3300027749	Freshwater Lake	MAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSEVWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL
Ga0209084_11402133	3300027749	Freshwater Lake	MAKDIAYLKAVPGNEGDYRALGPLRICPCGSDLWNVKCKFDDDGELGIYFLDMRCTQCDSLAVAPMPDWKTQ
Ga0209829_1000042255	3300027777	Freshwater Lake	MAKNISDLKATPGSEADYRGLGPIRVCPCGSDLWNVKCKFDEDNEIGIYFLDMNCALCDSAATSPTPEGRL
Ga0209777_100490428	3300027896	Freshwater Lake Sediment	MGEDIANLRATKGAEADYRALGPIRVCPCGSDTWNVKCKFDEDGELGIYFLDMRCVLCDSLAIAPMPDWK
Ga0209777_103782043	3300027896	Freshwater Lake Sediment	MSEDIANLKPTKGAEMDYRNLGPVRVCPCGSDLWNVKCKFDRDGEIGIYFLDMRCALCDSLAVAPMPEWKN
Ga0209777_104059853	3300027896	Freshwater Lake Sediment	MDDIANLKPTTGTEADYRNLGPIKVCPCGSDLWSVKCKFDDDGEIGIYFLDINCALCGSLAVAVTPP
Ga0209298_1000018441	3300027973	Freshwater Lake	MAKDIAYVKPDKGGEGDYRALGPLRVCPCGSEVWNVKCKFDDNGAIGIYFLDMRCLLCDSLAVAPYEGNLT
Ga0304729_100314814	3300028392	Freshwater Lake	MNHHSRMAEDIANLKPTPGQEADYRSLGPIRVCPCGSDLWSVKCKFDDDGEIGIYFLDVNCALCNSLAVAVTPPLGESRDV
Ga0304728_11786571	3300028393	Freshwater Lake	QHFTQQQKSFYSTSLKKRMAEDIAYVKPSKGNEGDYRSLGPIKVCPCGSEVWNVKCKFDDDGTIGIYFLDMRCLLCDSLAVAPFEGQL
Ga0316219_11494832	3300031759	Freshwater	LLKEMSKEIADLKATPGAEADYRSLGPISVCPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMPGWKQ
Ga0316220_10652332	3300031884	Freshwater	MSKEIADLKATPGAEADYRSLGPISVCPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMPGWKQ
Ga0316223_12133791	3300032560	Freshwater	MSKEIADLKATPGAEADYRSLGPISVCPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMP
Ga0316228_10797902	3300032579	Freshwater	MSKEIADLRATPEAEADYRSLGPIRICPCDSDLWNVKCKFDDDGELGIYFLDMRCASCDSLAVAPMPGWKQ
Ga0316230_12810781	3300032668	Freshwater	MSKEIADLKATPGAEADYRSLGPISVCPCDSDLWNVKCKFDDDGELGIYFLDMRCASC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences