Metagenome / Metatranscriptome Family F083910

Basic Information
Family ID	F083910
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	40 residues
Representative Sequence	EGKQVQVEDIRPSYAAVNVIEKALARYQKEREHLRAKDGH
Number of Associated Samples	100
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.68 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	91.96 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (95.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.214 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.18% β-sheet: 0.00% Coil/Unstructured: 58.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00837	T4_deiodinase	48.21
PF01479	S4	8.93
PF01202	SKI	3.57
PF03965	Penicillinase_R	2.68
PF00849	PseudoU_synth_2	2.68
PF00719	Pyrophosphatase	1.79
PF00251	Glyco_hydro_32N	0.89
PF02371	Transposase_20	0.89
PF08281	Sigma70_r4_2	0.89
PF01795	Methyltransf_5	0.89
PF01738	DLH	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	2.68
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	2.68
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.68
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	2.68
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	1.79
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	0.89
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	0.89
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.89
COG3507	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.89
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.89 %
Unclassified	root	N/A	4.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.46 %
Unclassified	root	N/A	4.46 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.46 %
Unclassified	root	N/A	4.46 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Unclassified	root	N/A	4.46 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.79 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Unclassified	root	N/A	4.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.79 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.79 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Unclassified	root	N/A	4.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.79 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.79 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100247289	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300002914\|JGI25617J43924_10124245	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300004152\|Ga0062386_101440498	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	574	Open in IMG/M
3300004633\|Ga0066395_10600589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	645	Open in IMG/M
3300005554\|Ga0066661_10023525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3312	Open in IMG/M
3300005569\|Ga0066705_10193298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1270	Open in IMG/M
3300005591\|Ga0070761_10755558	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300005712\|Ga0070764_10992157	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005764\|Ga0066903_102443474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1011	Open in IMG/M
3300005841\|Ga0068863_100245364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1729	Open in IMG/M
3300005921\|Ga0070766_10849345	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300005993\|Ga0080027_10462109	Not Available	514	Open in IMG/M
3300006032\|Ga0066696_10427030	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300006059\|Ga0075017_100944943	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006059\|Ga0075017_101506573	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300006804\|Ga0079221_10223955	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1048	Open in IMG/M
3300006806\|Ga0079220_11200520	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	626	Open in IMG/M
3300006806\|Ga0079220_11545126	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300007265\|Ga0099794_10602559	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300007265\|Ga0099794_10740986	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300009038\|Ga0099829_11653708	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300009088\|Ga0099830_10011285	All Organisms → cellular organisms → Bacteria	5472	Open in IMG/M
3300009088\|Ga0099830_10776987	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300009088\|Ga0099830_10835974	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300009090\|Ga0099827_11803371	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009143\|Ga0099792_10201245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300010048\|Ga0126373_11334750	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300010335\|Ga0134063_10205646	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300010343\|Ga0074044_10153653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1539	Open in IMG/M
3300010359\|Ga0126376_11007469	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300010359\|Ga0126376_11025336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300010361\|Ga0126378_10130006	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300010361\|Ga0126378_11204008	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300011120\|Ga0150983_15460190	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300011269\|Ga0137392_10711423	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300011271\|Ga0137393_10707983	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300011271\|Ga0137393_10875246	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300012203\|Ga0137399_11351006	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300012205\|Ga0137362_11385450	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300012207\|Ga0137381_10515913	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300012361\|Ga0137360_10781167	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300012361\|Ga0137360_11072134	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300012683\|Ga0137398_10176898	All Organisms → cellular organisms → Bacteria → Acidobacteria	1398	Open in IMG/M
3300012685\|Ga0137397_10884815	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300012923\|Ga0137359_11421787	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300012927\|Ga0137416_12017744	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012929\|Ga0137404_10020083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4805	Open in IMG/M
3300012930\|Ga0137407_12009905	Not Available	552	Open in IMG/M
3300014165\|Ga0181523_10181576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1225	Open in IMG/M
3300016294\|Ga0182041_10002017	All Organisms → cellular organisms → Bacteria	10436	Open in IMG/M
3300016422\|Ga0182039_11005065	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300017823\|Ga0187818_10363091	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300017933\|Ga0187801_10017578	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300017943\|Ga0187819_10131295	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300017955\|Ga0187817_10573226	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300017961\|Ga0187778_10494974	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300017995\|Ga0187816_10219472	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300018007\|Ga0187805_10194640	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300018086\|Ga0187769_10575958	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300020006\|Ga0193735_1006002	All Organisms → cellular organisms → Bacteria → Acidobacteria	3882	Open in IMG/M
3300020199\|Ga0179592_10339757	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300020579\|Ga0210407_11251879	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300020580\|Ga0210403_10602872	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300020581\|Ga0210399_10518258	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300021086\|Ga0179596_10594009	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300021088\|Ga0210404_10218777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300021168\|Ga0210406_10923995	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300021170\|Ga0210400_11309333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300021171\|Ga0210405_10192451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M
3300021171\|Ga0210405_10313473	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300021181\|Ga0210388_10132500	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300021478\|Ga0210402_11237151	Not Available	674	Open in IMG/M
3300021479\|Ga0210410_10696859	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300021559\|Ga0210409_10437310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1167	Open in IMG/M
3300021560\|Ga0126371_11180456	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300022726\|Ga0242654_10338989	Not Available	563	Open in IMG/M
3300026296\|Ga0209235_1059052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1801	Open in IMG/M
3300026301\|Ga0209238_1003924	All Organisms → cellular organisms → Bacteria	5956	Open in IMG/M
3300026328\|Ga0209802_1305823	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300026361\|Ga0257176_1020899	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300026530\|Ga0209807_1321706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300026552\|Ga0209577_10202333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300026557\|Ga0179587_10319854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002	Open in IMG/M
3300027528\|Ga0208985_1069237	Not Available	681	Open in IMG/M
3300027643\|Ga0209076_1038191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300027671\|Ga0209588_1068707	All Organisms → cellular organisms → Bacteria → Acidobacteria	1145	Open in IMG/M
3300027727\|Ga0209328_10182214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	635	Open in IMG/M
3300027853\|Ga0209274_10560037	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300027895\|Ga0209624_10845420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300027903\|Ga0209488_11041151	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300028138\|Ga0247684_1033786	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300030056\|Ga0302181_10517778	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300030521\|Ga0307511_10399306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031240\|Ga0265320_10530971	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300031573\|Ga0310915_10721357	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300031679\|Ga0318561_10115259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1424	Open in IMG/M
3300031720\|Ga0307469_11789662	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300031753\|Ga0307477_10121118	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300031754\|Ga0307475_11204743	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300031763\|Ga0318537_10111895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300031781\|Ga0318547_10741254	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031910\|Ga0306923_10532811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300032180\|Ga0307471_103363126	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300032205\|Ga0307472_100503420	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300032205\|Ga0307472_101358612	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300032261\|Ga0306920_102999410	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300032893\|Ga0335069_11685395	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300032954\|Ga0335083_10285194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300033134\|Ga0335073_10552171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1300	Open in IMG/M
3300033158\|Ga0335077_11909417	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300033289\|Ga0310914_10347178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1342	Open in IMG/M
3300033289\|Ga0310914_10810414	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	2.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Aquatic	Environmental → Aquatic	8.93%
Plants	Host-Associated → Plants	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Freshwater	Environmental → Aquatic → Freshwater	7.14%
Sediment	Environmental → Aquatic → Sediment	1.79%
Peat	Environmental → Terrestrial → Peat	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002472893	3300002245	Forest Soil	GKLVEVEDIKPAYAAVTVIERALARYQQEREKLIAKAGS*
JGI25617J43924_101242451	3300002914	Grasslands Soil	QLEGKQVQVDDIRPAYAAVKVIETALARYKEQRETLRAKDRR*
Ga0062386_1014404982	3300004152	Bog Forest Soil	KQLEGKQVQVEDIRPAYAALNIIEKSLARYTAQREQLRASADY*
Ga0066395_106005891	3300004633	Tropical Forest Soil	EGKQVQVEDIRPASAAVKVIEKALARYQKEREHLRVKAGD*
Ga0066661_100235256	3300005554	Soil	GKEVRVDDIRPAYAAVKVIENALARYKAQREALRAKDQR*
Ga0066705_101932983	3300005569	Soil	LEGKKVEVEDIRPAYAAVTVIERALARYQQERDRLTGKVTPK*
Ga0070761_107555582	3300005591	Soil	LLEGKKVEVEEIRPAYAALTVIERSLARYKAEREHLLAKDAHK*
Ga0070764_109921571	3300005712	Soil	KKVEVEEIRPAYAALNVIERSLARYKAEREHLLAKDAHK*
Ga0066903_1024434743	3300005764	Tropical Forest Soil	QDYKQLEGKQVQVEDIRPAYAAANVIEKALTRYKKEREHLRAKDHR*
Ga0068863_1002453645	3300005841	Switchgrass Rhizosphere	LEGKKVEVEDIRPAYAAVTVIERALARYQQERDWLTGKLAVK*
Ga0070766_108493451	3300005921	Soil	KLLEGKKVEVEEIRPAYAALTVIERSLARYKAEREHLLVKDARK*
Ga0080027_104621091	3300005993	Prmafrost Soil	GKKVEVEDIRPAYAALTVIERALARYQQEKEKLLAEIGRSAERHG*
Ga0066696_104270301	3300006032	Soil	EGKEVRVDDIRPAYAAVKVIENALARYKAQREALRAKDQR*
Ga0075017_1009449431	3300006059	Watersheds	YKELEGKKVQVDDIRPAYAAAKVIEKALARYQEQREALRAKDKR*
Ga0075017_1015065731	3300006059	Watersheds	GKQVQVEDIKPAYAAMNVIERALTRYRALREQLREEHHCPGDS*
Ga0079221_102239551	3300006804	Agricultural Soil	LEGKQVQVEEIRPAYAALSVIEKSLNRYREHRAELLKKEGRS*
Ga0079220_112005201	3300006806	Agricultural Soil	YKQLEGKKVEVEDIRPAYAAVAVIERSLARYRAEREHLLATDERT*
Ga0079220_115451262	3300006806	Agricultural Soil	EGKQVQVEDIRPAYAAVKVIENALARYKKERDKLRLKDGH*
Ga0099794_106025591	3300007265	Vadose Zone Soil	VEDIRPAYAAVKVIEKSLARYKEQKETLRAKDRR*
Ga0099794_107409861	3300007265	Vadose Zone Soil	KQLEGKQVQVEDIRPAYAAIKVIENSLARYNEQRETLRAKDHL*
Ga0099829_116537081	3300009038	Vadose Zone Soil	VKQVQVDDIRPAYAAVKVIEQALARYKEQRETLRAKDLR*
Ga0099830_100112859	3300009088	Vadose Zone Soil	DYKQLEGKQVQVEDILPAYAAVKVIENALARYKEQREALRAKDHR*
Ga0099830_107769873	3300009088	Vadose Zone Soil	VQVEDIRPAYAAMNIIEKSLARYTALRDELRASANY*
Ga0099830_108359741	3300009088	Vadose Zone Soil	LEGKQVQVDDIRPAYAAVTVIEKALARYKAQSEPLRAKEHH*
Ga0099827_118033711	3300009090	Vadose Zone Soil	VQVDDIRPAYAAVKVIEKALAQYKEKRESLRAKDGH*
Ga0099792_102012454	3300009143	Vadose Zone Soil	LEGKRVEVEDIRPAYAALTVIERALARYKQEREKLMEKNVK*
Ga0126373_113347501	3300010048	Tropical Forest Soil	KQLEGKQVQVEDIRPAYAALSVIEKALARYKALRDELRSAIGS*
Ga0134063_102056461	3300010335	Grasslands Soil	YKQLEGKEVRVDDIRPAYAAVKVIENALARYKAQREALRAKDQR*
Ga0074044_101536534	3300010343	Bog Forest Soil	VEVEEIRPAYAALNVIEKALASYKAERERLLPKGYHK*
Ga0126376_110074691	3300010359	Tropical Forest Soil	VEDIRPAYAAANVIEKALARYKQERARLRAMDNH*
Ga0126376_110253361	3300010359	Tropical Forest Soil	YKQLEGKKVEVEDIRPAYAAVTVIERALARYQKEKDILLGKLAAR*
Ga0126378_101300064	3300010361	Tropical Forest Soil	GKAVQVEEIRPAYAAAAIIERSLARYHEHRKELLKRDAHG*
Ga0126378_112040081	3300010361	Tropical Forest Soil	EGKQVQVEDIRPSYAAVNVIEKALARYQKEREHLRAKDGH*
Ga0150983_154601901	3300011120	Forest Soil	KLLEGKKVEVEEIRPAYAALTVIERSLARYKAEREHLLAKDARK*
Ga0137392_107114231	3300011269	Vadose Zone Soil	QLEGKQVQVEDIRPAYAAIKVIENSLARYKQERDKLRAKDGR*
Ga0137393_107079833	3300011271	Vadose Zone Soil	VQVEDIRPAYAAVNVIEKALARYQQQREQLRAKDKG*
Ga0137393_108752461	3300011271	Vadose Zone Soil	GKQVQVDDIRPAYAAIKVIEKALAQYEEKREILRAKDGH*
Ga0137399_113510061	3300012203	Vadose Zone Soil	YKQLEGKQVQVEDIRPAYAAVKVIEKSLARYKEQRETLRAKDRH*
Ga0137362_113854502	3300012205	Vadose Zone Soil	VQVEDIRPAYAAMNIIEKSLARYTALREELRASANY*
Ga0137381_105159131	3300012207	Vadose Zone Soil	KQVQVEDIRPAYAAVKVIENALARYKRERDKLRSKDGRE*
Ga0137360_107811673	3300012361	Vadose Zone Soil	VQVDDIRPAYAAVTVIEKALARYKEQSAALRAKERH*
Ga0137360_110721341	3300012361	Vadose Zone Soil	GKQVQVDDIRPAYAAVKVIENALARYQDQRETLRAKDHR*
Ga0137398_101768981	3300012683	Vadose Zone Soil	QLEGKQVQVDDIRPAYAAVKVIEKALAQYKEKREMLRAKDGH*
Ga0137397_108848151	3300012685	Vadose Zone Soil	KQLEGKQVQVEDIRPAYAAVKVIEQSLARYKEQRETLRAKGRH*
Ga0137359_114217871	3300012923	Vadose Zone Soil	EVEDIRPAYAAITVIERALARYQQEREKLLSKEAG*
Ga0137416_120177442	3300012927	Vadose Zone Soil	YKQLEGKQVQVEDIRPAYAAVKVIENALARYKEQRGTLRAKDQR*
Ga0137404_100200837	3300012929	Vadose Zone Soil	LEGKKVEVEDIRPAYAALTVIERALARYQQEREKLMSNVSR*
Ga0137407_120099052	3300012930	Vadose Zone Soil	YKQLEGRQVQVEDIRPAYAALNIIEKSLARYAALRDQRRASANY*
Ga0181523_101815761	3300014165	Bog	KQVQVEDIKPAYAAMNIIEKSLARYKALRDQLRADAH*
Ga0182041_100020171	3300016294	Soil	DYKQLEGKQVQVEGIRSAHAAVKVIEKALARYKKERDRLRAQDAR
Ga0182039_110050653	3300016422	Soil	YKQLEGKQVQVEDIRPAYAAMSVIDKALTRYNALREQLRAEQF
Ga0187818_103630912	3300017823	Freshwater Sediment	VQVEDIRPAYAAVNVIEKALGRYKEHREALRAKDRQ
Ga0187801_100175785	3300017933	Freshwater Sediment	QVQVEDIRPAYAAANIIDKALARYKVLRDELRAAHQ
Ga0187819_101312952	3300017943	Freshwater Sediment	VQVEDIRPAYAAVNVIEKALARYKEHREALRAKDRQ
Ga0187817_105732261	3300017955	Freshwater Sediment	KQLEGKQVQVEDIRPAYAAVNVIEKALARYKENRDTLRAADNC
Ga0187778_104949743	3300017961	Tropical Peatland	EGKQVQVEDIRPAYAAANVIERALASYKEHREALRAKDSR
Ga0187816_102194722	3300017995	Freshwater Sediment	EGKQVQVEDIRPAYAAVNVIEKALARYKENRDTLRAADNC
Ga0187805_101946401	3300018007	Freshwater Sediment	YKQLEGKQVQVEDIKPAYAAINVIEKALNRYKAMRDELLAGHH
Ga0187769_105759583	3300018086	Tropical Peatland	KQVQVEDIRPAYAAVNVIEKALARYKEHRKELRAKDGY
Ga0193735_10060027	3300020006	Soil	KEVRVDDIRPAYAAVKVIENALARYRDQREVLRAKDHH
Ga0179592_103397571	3300020199	Vadose Zone Soil	QVEDIRPAYAAMNIIEKSLARYTALREELRASADY
Ga0210407_112518791	3300020579	Soil	LEGKQVQVDDIRPAYAAVKVIEQALARYKDQRQTLRAKDHL
Ga0210403_106028723	3300020580	Soil	QVQVEDIRPAYAAMNIIEKSLARYAALRDQLRASANY
Ga0210399_105182584	3300020581	Soil	QDYKQLEGKQVQVEDIKPAYAALVVIEKALALYQQLRDKLIAGEPH
Ga0179596_105940092	3300021086	Vadose Zone Soil	QVDDIRPAYAAVKVIEKALAQYKEKREILRAKDGH
Ga0210404_102187773	3300021088	Soil	KVEVEEIRPAYAALTVIERSLARYKAEREHLLAKDARK
Ga0210406_109239951	3300021168	Soil	QVQVEEIRPAYAAVNVIEKSLARYQQERSRLRARDGQ
Ga0210400_113093331	3300021170	Soil	QLEGKRVEVEDIRPAYAALTVIERSLARYQQERDRLIAKAAAK
Ga0210405_101924511	3300021171	Soil	LEGIKVEVEDIRPAYAALTVIERSLARYQQEREKLLPKISRP
Ga0210405_103134731	3300021171	Soil	LPNHRLLDIKPAYAALVVIERALARYQQLRDKLIAGEPH
Ga0210388_101325001	3300021181	Soil	KQLEGKKVEVEDIRPAYAAITVIERALARYQQERDQLLPKISRP
Ga0210402_112371511	3300021478	Soil	SDYKQLEGKKVEVEDIRPAYAAITVIERALASYQRHRDELRTHDSR
Ga0210410_106968592	3300021479	Soil	KQLEGKQVQVEDIRPAYAAVNVIEKALARYKQERGRLMAKDGL
Ga0210409_104373104	3300021559	Soil	KQVQVEDIRPAYAALVVIERALARYQQLRDKLIAGEPH
Ga0126371_111804561	3300021560	Tropical Forest Soil	GKAVQVEEIRPAYAAAAIIERSLARYHEHRKELLKRDAHG
Ga0242654_103389891	3300022726	Soil	VQVEDIRPAYAAMNIIEKSLARYTALRDQLRASADY
Ga0209235_10590521	3300026296	Grasslands Soil	DYKQLEGKQVQVEDIRPAYAAATVIEKALARYKQERDKLRSKDGRG
Ga0209238_10039246	3300026301	Grasslands Soil	QVDDIRPAYAAAEVIEKALARYKDQREALRAKDHR
Ga0209802_13058232	3300026328	Soil	QVQVEDIRPAYAAVKVIENALARYKKERDKLRSKDGHG
Ga0257176_10208991	3300026361	Soil	EGKQVRVDDIRPAYAAVKVIENALARYKDQREALRAKDLR
Ga0209807_13217061	3300026530	Soil	KQLEGKKVEVEDIRPAYAAVTVIERALARYQQERDRLTGKVTPK
Ga0209577_102023331	3300026552	Soil	KQLEGKQVQVEDIRPAYAAIKVIENSLARYKQERNKLRAKDGR
Ga0179587_103198541	3300026557	Vadose Zone Soil	VQVEDIRPAYAAMNIIEKSLARYTALREELRASADY
Ga0208985_10692371	3300027528	Forest Soil	GGKKVEVEDIRPAYAALTVIERALARYQQEREKLLNKVNRT
Ga0209076_10381914	3300027643	Vadose Zone Soil	GKQVQVEDIRPAYAAIKVIENSLARYNEQRETLRAKDHL
Ga0209588_10687071	3300027671	Vadose Zone Soil	LEGKQVQVEDIRPAYAAVKVIEQSLARYKEQRETLRAKGRH
Ga0209328_101822141	3300027727	Forest Soil	KQLEGKRVEVEDIRPAYAAVTVIERSLARYQQEREKLIAKEGR
Ga0209274_105600371	3300027853	Soil	LLEGKKVEVEEIRPAYAALTVIERSLARYKAEREHLLAKDAHK
Ga0209624_108454202	3300027895	Forest Soil	GKRVEVEDIRPAYAALTVIERSLARYQQERDRLIAKAAAK
Ga0209488_110411512	3300027903	Vadose Zone Soil	RLHRGKRVEVEDIRPAYAAITVIERALARYQQERERLLSKEGG
Ga0247684_10337861	3300028138	Soil	GKKVEVEEIRPAYAALTVIERALARYKAERDHLLAKDAHAGSQSAH
Ga0302181_105177781	3300030056	Palsa	QLEGKQVQVEEIRPAYAALAVIEKSLARYQQNREHLLANAGQ
Ga0307511_103993062	3300030521	Ectomycorrhiza	LEGKRVEVEDIRPAYAALTVIERSLARYQQEKDKLTANLVPK
Ga0265320_105309711	3300031240	Rhizosphere	KLLEGKKVEVEEIRPAYAALNVIERSLARYKAEREHLLAKDARK
Ga0310915_107213571	3300031573	Soil	GKQVQVEDIRPAYAAMSVIDKALTRYNALREQLRAEQF
Ga0318561_101152591	3300031679	Soil	QDYKQLEGKQVQVEGIRSAHAAVKVIEKALARYKKERDRLRAKDAR
Ga0307469_117896623	3300031720	Hardwood Forest Soil	VQVEDIKPAYAALVVIEKALARYQQLRDKLIAGEPH
Ga0307477_101211181	3300031753	Hardwood Forest Soil	RVEVEDIRPAYAAVTVIERSLARYQQEREKLIAKGGR
Ga0307475_112047432	3300031754	Hardwood Forest Soil	VEEIRPAYAALTVIERSLARYKAEREHLLAKDVCK
Ga0318537_101118953	3300031763	Soil	QVQVEGIRSAHAAVKVIEKALARYKKERDRLRAKDAR
Ga0318547_107412542	3300031781	Soil	AVQVEEIRPAYAALTIIERALARYQEKREELRHERAL
Ga0306923_105328114	3300031910	Soil	YKQLEGKQVQVEDIRPAYAALSVIDKALARYKALRDELRNAISS
Ga0307471_1033631262	3300032180	Hardwood Forest Soil	EGKRVEVEDIRPAYAAITVIERALARYQQERERLLSKEAG
Ga0307472_1005034203	3300032205	Hardwood Forest Soil	KRVEVEDIRPAYAAATVIERALARYKQEREKLIAKANG
Ga0307472_1013586121	3300032205	Hardwood Forest Soil	QLEGKKVEVEDIRPAYAAVTVIERALARYQQEKDTFIAKLASR
Ga0306920_1029994101	3300032261	Soil	KQLEGQQVQVEDMRPRSAAVNVIEKVLARYPKEREYLRDKDGQ
Ga0335069_116853951	3300032893	Soil	KQLEGKQVQVEDIRPAYAALNIIEKSLARYQALRDELVAAR
Ga0335083_102851941	3300032954	Soil	QVQVEDIKPSYAAINVIEKALARYRALREDLIAGKDH
Ga0335073_105521711	3300033134	Soil	QLEGKQVQVEDIRPAYAAANIIEKALARYKALRDELRSPAHA
Ga0335077_119094171	3300033158	Soil	YKQLEGKQVQVEDIKPAYAAINVIEKALARYKQLREKLRAGYS
Ga0310914_103471784	3300033289	Soil	GKQVQVEDIRPAYAALSVIDKALARYKALRDELRNAISS
Ga0310914_108104141	3300033289	Soil	GKQVHVEDIRPAYAATSIIEKALLRYQALRDDLRAVHT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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