Metagenome / Metatranscriptome Family F083965

Basic Information
Family ID	F083965
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	47 residues
Representative Sequence	MRNCATNLIAAGACLACGVLYTATNRPLAAVALLVVLGLANLAFILVR
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.57 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.714 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.26% β-sheet: 0.00% Coil/Unstructured: 44.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07858	LEH	25.89
PF00296	Bac_luciferase	12.50
PF00106	adh_short	7.14
PF13561	adh_short_C2	7.14
PF07690	MFS_1	4.46
PF04199	Cyclase	2.68
PF08281	Sigma70_r4_2	1.79
PF04542	Sigma70_r2	1.79
PF12802	MarR_2	0.89
PF04075	F420H2_quin_red	0.89
PF17167	Glyco_hydro_36	0.89
PF13263	PHP_C	0.89
PF00440	TetR_N	0.89
PF00486	Trans_reg_C	0.89
PF02371	Transposase_20	0.89
PF01566	Nramp	0.89
PF04828	GFA	0.89
PF07883	Cupin_2	0.89
PF01548	DEDD_Tnp_IS110	0.89
PF08240	ADH_N	0.89
PF03061	4HBT	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3631	Ketosteroid isomerase-related protein	General function prediction only [R]	25.89
COG4308	Limonene-1,2-epoxide hydrolase LimA/EphG	Secondary metabolites biosynthesis, transport and catabolism [Q]	25.89
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	12.50
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.79
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.89
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.68 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.46 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	4.46 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.46 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101650165	Not Available	618	Open in IMG/M
3300002914\|JGI25617J43924_10025421	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300004082\|Ga0062384_100330685	Not Available	957	Open in IMG/M
3300004633\|Ga0066395_10227085	Not Available	990	Open in IMG/M
3300005174\|Ga0066680_10694901	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005332\|Ga0066388_100142455	All Organisms → cellular organisms → Bacteria → Proteobacteria	2963	Open in IMG/M
3300005332\|Ga0066388_101202594	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005557\|Ga0066704_10219274	Not Available	1289	Open in IMG/M
3300005568\|Ga0066703_10662706	Not Available	603	Open in IMG/M
3300005764\|Ga0066903_100122274	All Organisms → cellular organisms → Bacteria	3623	Open in IMG/M
3300005764\|Ga0066903_100585657	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300005921\|Ga0070766_10814346	Not Available	637	Open in IMG/M
3300005921\|Ga0070766_11068164	Not Available	557	Open in IMG/M
3300006797\|Ga0066659_10929665	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006893\|Ga0073928_11176788	Not Available	517	Open in IMG/M
3300007255\|Ga0099791_10093738	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300009038\|Ga0099829_10005875	All Organisms → cellular organisms → Bacteria → Proteobacteria	7504	Open in IMG/M
3300009088\|Ga0099830_10031592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3584	Open in IMG/M
3300009090\|Ga0099827_10568394	Not Available	977	Open in IMG/M
3300009143\|Ga0099792_10069037	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300010048\|Ga0126373_10067917	All Organisms → cellular organisms → Bacteria	3213	Open in IMG/M
3300010048\|Ga0126373_10255238	Not Available	1728	Open in IMG/M
3300010048\|Ga0126373_10477510	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300010159\|Ga0099796_10474652	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300011270\|Ga0137391_10295237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1399	Open in IMG/M
3300011271\|Ga0137393_11416688	Not Available	584	Open in IMG/M
3300012096\|Ga0137389_10766408	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012200\|Ga0137382_11157470	Not Available	551	Open in IMG/M
3300012202\|Ga0137363_11203615	Not Available	644	Open in IMG/M
3300012203\|Ga0137399_11604605	Not Available	539	Open in IMG/M
3300012205\|Ga0137362_10387896	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300012211\|Ga0137377_10234387	Not Available	1763	Open in IMG/M
3300012361\|Ga0137360_11328580	Not Available	620	Open in IMG/M
3300012685\|Ga0137397_10365844	Not Available	1074	Open in IMG/M
3300012917\|Ga0137395_10939195	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300012918\|Ga0137396_10339236	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012918\|Ga0137396_11256395	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012918\|Ga0137396_11257278	Not Available	517	Open in IMG/M
3300012922\|Ga0137394_10723029	Not Available	837	Open in IMG/M
3300012923\|Ga0137359_10258197	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1554	Open in IMG/M
3300012924\|Ga0137413_10691557	Not Available	773	Open in IMG/M
3300012924\|Ga0137413_11243210	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300012925\|Ga0137419_11024673	Not Available	685	Open in IMG/M
3300012927\|Ga0137416_11707764	Not Available	574	Open in IMG/M
3300012929\|Ga0137404_12214855	Not Available	514	Open in IMG/M
3300012930\|Ga0137407_10360476	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300012944\|Ga0137410_10113160	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300015054\|Ga0137420_1239898	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300015245\|Ga0137409_10033025	All Organisms → cellular organisms → Bacteria → Proteobacteria	5004	Open in IMG/M
3300015264\|Ga0137403_10041869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4774	Open in IMG/M
3300016387\|Ga0182040_10130596	Not Available	1759	Open in IMG/M
3300016422\|Ga0182039_12224849	Not Available	506	Open in IMG/M
3300016445\|Ga0182038_11935383	Not Available	533	Open in IMG/M
3300018468\|Ga0066662_11808860	Not Available	639	Open in IMG/M
3300020199\|Ga0179592_10113212	Not Available	1246	Open in IMG/M
3300020199\|Ga0179592_10135413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1130	Open in IMG/M
3300020579\|Ga0210407_11008646	Not Available	634	Open in IMG/M
3300020580\|Ga0210403_11199785	Not Available	585	Open in IMG/M
3300020581\|Ga0210399_10767170	Not Available	789	Open in IMG/M
3300020583\|Ga0210401_10041092	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4383	Open in IMG/M
3300020583\|Ga0210401_10201949	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300020583\|Ga0210401_10991141	Not Available	699	Open in IMG/M
3300021046\|Ga0215015_10104302	Not Available	689	Open in IMG/M
3300021151\|Ga0179584_1244846	Not Available	770	Open in IMG/M
3300021168\|Ga0210406_10700456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300021180\|Ga0210396_10119724	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300021180\|Ga0210396_10819462	Not Available	798	Open in IMG/M
3300021181\|Ga0210388_10224880	Not Available	1645	Open in IMG/M
3300021372\|Ga0213877_10105685	Not Available	860	Open in IMG/M
3300021401\|Ga0210393_10007210	All Organisms → cellular organisms → Bacteria	8732	Open in IMG/M
3300021406\|Ga0210386_11030996	Not Available	701	Open in IMG/M
3300021406\|Ga0210386_11437859	Not Available	577	Open in IMG/M
3300021406\|Ga0210386_11524697	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300021407\|Ga0210383_10408380	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300021420\|Ga0210394_10438911	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300021420\|Ga0210394_11121769	Not Available	678	Open in IMG/M
3300021432\|Ga0210384_11725088	Not Available	532	Open in IMG/M
3300021433\|Ga0210391_11554293	Not Available	507	Open in IMG/M
3300021474\|Ga0210390_10047131	All Organisms → cellular organisms → Bacteria	3534	Open in IMG/M
3300021477\|Ga0210398_10457500	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300021559\|Ga0210409_10215278	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300021560\|Ga0126371_11635684	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300022533\|Ga0242662_10068438	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300026499\|Ga0257181_1070745	Not Available	598	Open in IMG/M
3300026514\|Ga0257168_1008074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1914	Open in IMG/M
3300026514\|Ga0257168_1025188	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300027619\|Ga0209330_1157941	Not Available	510	Open in IMG/M
3300027671\|Ga0209588_1027567	Not Available	1808	Open in IMG/M
3300027846\|Ga0209180_10019129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3617	Open in IMG/M
3300027862\|Ga0209701_10229568	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300027882\|Ga0209590_10645703	Not Available	679	Open in IMG/M
3300027889\|Ga0209380_10151011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300027903\|Ga0209488_10063714	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300030848\|Ga0075388_10695488	Not Available	500	Open in IMG/M
3300031057\|Ga0170834_111975311	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300031573\|Ga0310915_10391271	Not Available	987	Open in IMG/M
3300031708\|Ga0310686_106010906	Not Available	712	Open in IMG/M
3300031715\|Ga0307476_11314503	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300031718\|Ga0307474_10571319	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031718\|Ga0307474_10767512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300031753\|Ga0307477_11068236	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031754\|Ga0307475_10883662	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031754\|Ga0307475_11539069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300031770\|Ga0318521_10845629	Not Available	558	Open in IMG/M
3300031820\|Ga0307473_10599853	Not Available	760	Open in IMG/M
3300031823\|Ga0307478_11342885	Not Available	594	Open in IMG/M
3300031890\|Ga0306925_10674873	Not Available	1084	Open in IMG/M
3300031947\|Ga0310909_10341892	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300031962\|Ga0307479_10514293	Not Available	1181	Open in IMG/M
3300031962\|Ga0307479_11472830	Not Available	638	Open in IMG/M
3300032180\|Ga0307471_100169456	Not Available	2135	Open in IMG/M
3300032180\|Ga0307471_104325832	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.21%
Aquatic	Environmental → Aquatic	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.21%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.18%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016501652	3300000364	Soil	MRNCTTNLTAAGACLVCVVLYTATNRPRAAVALLVVLGLANLAFTLL*
JGI25617J43924_100254213	3300002914	Grasslands Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL*
Ga0062384_1003306851	3300004082	Bog Forest Soil	MNCRNINLIAASACLACGIAYTVANGPVTTIATVVVIGLANLAFVLGR*
Ga0066395_102270851	3300004633	Tropical Forest Soil	GGGGALRGGAMKYRAINLVAASACLCCGIAYTVMNRPLTSIAILVVLGLANLALVLVR*
Ga0066680_106949011	3300005174	Soil	MRNCTTNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSF*
Ga0066388_1001424557	3300005332	Tropical Forest Soil	MKYRAINLVAASACLCCGIAYTVTNRPLTSIAILVVLGLANLAFILVR*
Ga0066388_1012025941	3300005332	Tropical Forest Soil	MRRHTINWIAAGACLACAIAYTVTNRPVTTIATLVVLGVVNLAFILAR*
Ga0066704_102192743	3300005557	Soil	ATNLIAAGACLTCGSFYTVTNRPIAAVALLVVLGLANLAFTSF*
Ga0066703_106627062	3300005568	Soil	AMKHCTTNLIAAGACLVCGVFYTVTNRPLAAVVTLVVLGLANLAFILVR*
Ga0066903_1001222749	3300005764	Tropical Forest Soil	MKYRAINLIAASACLCCGIAYTVTNRPLTSIAILVVLGLANLAFILVR*
Ga0066903_1005856571	3300005764	Tropical Forest Soil	GALRGGAMKYRAINLVAASACLCCGIAYTVMNRPLTSIAILVVLGLANLALVLVR*
Ga0070766_108143462	3300005921	Soil	MRHCAINLIAAGACLACGVLYTATNRPLAAVALLVVLGLANLAFILVR*
Ga0070766_110681641	3300005921	Soil	MRNCTTNLIAAGACLVCGILYTVTNRPLAAVALLVVLGLANLAFILAR*
Ga0066659_109296652	3300006797	Soil	MRNCTTNLIAAGACLVCGVLYTATNQPLAAVALLVVLGLANLAFILAR*
Ga0073928_111767882	3300006893	Iron-Sulfur Acid Spring	MKCRTFNLIVAGACLACGIAYSVTGRPMSAIATLVVLGLANLAFILAR*
Ga0099791_100937382	3300007255	Vadose Zone Soil	MWHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL*
Ga0099829_100058752	3300009038	Vadose Zone Soil	MRSRTTNLIAAGACLACGILYTVTDRPLAAVALLVVLGLANLAFILVR*
Ga0099830_100315924	3300009088	Vadose Zone Soil	MRNCTTNLIATGACLVCGVLYTTTNRPLAVALLVVLGLANLAFILVR*
Ga0099827_105683942	3300009090	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTAL*
Ga0099792_100690371	3300009143	Vadose Zone Soil	MIAASACLVCGVFYTVTNRKLAAEATLVVLGLANLAFILVR*
Ga0126373_100679173	3300010048	Tropical Forest Soil	MKYRAINLVAASACLCCGIAYTVMNRPLTSIAILVVLGLANLALVLVR*
Ga0126373_102552383	3300010048	Tropical Forest Soil	MKYRAINLIAASACLCCGVAYTVTNRPLSSIAILVVLGLANLAFILVR*
Ga0126373_104775102	3300010048	Tropical Forest Soil	MKYRAINLVAASACLCCGIAYSVMNRPLTSIAILVVLGLANLAFILVR*
Ga0099796_104746522	3300010159	Vadose Zone Soil	MRNCTTNLIAASACLVCGVFYTATNRPLAAVALLVVLGLANLAFILVR*
Ga0137391_102952371	3300011270	Vadose Zone Soil	SEYVAAGACLACGIAYTTANRPVATIATVVVIGLANLAFILGR*
Ga0137393_114166882	3300011271	Vadose Zone Soil	VMKCSNINLIAACACLACGIAYTAANRPVTSIATVVVIGLANLAFILGR*
Ga0137389_107664082	3300012096	Vadose Zone Soil	MRSRTTNLIAAGACLACGIFYTVTDRPLAAVALLVVLGLANLAFILVR*
Ga0137382_111574701	3300012200	Vadose Zone Soil	CTTNLIAAGACLVCGVFFTATNRPLAAVVTLVVLGLVNLAFILVRYLFSSSAGNS*
Ga0137363_112036152	3300012202	Vadose Zone Soil	MRNCTTNLIAAGACLVCGALYTATNRPLAAVALLVVLGLANLAFILVR*
Ga0137399_116046051	3300012203	Vadose Zone Soil	MKHCATNLIAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILVR*
Ga0137362_103878962	3300012205	Vadose Zone Soil	MRRCATNLIAAGACLTCGSFYTVTNRPIAAVAQLVVLGLANLAFTSL*
Ga0137377_102343872	3300012211	Vadose Zone Soil	MRNCTTNLMPAGACLVCGVLYTATNQPLAAVALLVVLGLANLAFILAR*
Ga0137360_113285801	3300012361	Vadose Zone Soil	IIRSRTTNLIAAGACLGCGIFYTVTDRPLAAVALLVVLGLANLAFILVR*
Ga0137397_103658442	3300012685	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYMVTNRPIAAVALLVVLGLANLAFTSL*
Ga0137395_109391952	3300012917	Vadose Zone Soil	MRNCTTNLIAAGACLVCGVLYTATNQPLAAVALLVVLGLANLAFILVR*
Ga0137396_103392361	3300012918	Vadose Zone Soil	RNCTPNLIAAGACLVCGVLYTATNRPLAAVVTLVVLGLANLAFILVR*
Ga0137396_112563952	3300012918	Vadose Zone Soil	MRHCATNLIAAGVYLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL*
Ga0137396_112572781	3300012918	Vadose Zone Soil	MRSRTNNLIAAGACLACGIFYTVTDRPLAAVALLVVLGLANLAFILVR*
Ga0137394_107230291	3300012922	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLRLANLSFTSL*
Ga0137359_102581971	3300012923	Vadose Zone Soil	MRRHTINWIAASACLACALAYTVANKPLIAIATLVVLGLANLA
Ga0137413_106915571	3300012924	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLAN
Ga0137413_112432102	3300012924	Vadose Zone Soil	MRNRTPNLIAAGACLVCGILYTVTNRPLAAVVLLVVLGLANLAFILVR*
Ga0137419_110246732	3300012925	Vadose Zone Soil	MRNRTPNLIAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAF
Ga0137416_117077641	3300012927	Vadose Zone Soil	MRNCTPNLIAAGACLVCGVLYTATNRPLAAVALLVVLGLANLAFILVR*
Ga0137404_122148551	3300012929	Vadose Zone Soil	TTNLIAAGACLVCGVFYTVTNRKLAAEATLVVLGLANLAFILVR*
Ga0137407_103604761	3300012930	Vadose Zone Soil	IMRNCTTNLIAAGACLVCGVLYTATNQPLAAVALLVVLGLANLAFILAR*
Ga0137410_101131604	3300012944	Vadose Zone Soil	MRNCTTNLIAAGACLVCGALYTATNRPLAAVVLLVVLGLANLAFILVR*
Ga0137420_12398983	3300015054	Vadose Zone Soil	RHCATNLIATGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL*
Ga0137409_100330255	3300015245	Vadose Zone Soil	MRDCTTNLIAASACLVCGVFYTATNRPLAAVVLLVVLGLANLAFVLVR*
Ga0137403_100418696	3300015264	Vadose Zone Soil	MRNCTTNLIAAGACLVCGVLYTATNRPLAAVALLVVLGLANLAFILVR*
Ga0182040_101305961	3300016387	Soil	KYRAINLVAASACLCCGIVYTVTNRPLTSIAILVVLGLANLAFILAR
Ga0182039_122248491	3300016422	Soil	MKNHAINLIAASACLCCGIAYTVANRPLTSIAILVVLGLANLAFILVR
Ga0182038_119353832	3300016445	Soil	MKNHAINLIAASVCLCCGIAYTVANRPLTSIAILVVLGLANLAFMLVR
Ga0066662_118088602	3300018468	Grasslands Soil	MRNCTTNLIAAGACLVCGVFYTMTNRPVAAVVTLVVLGLANLAFILVR
Ga0179592_101132121	3300020199	Vadose Zone Soil	MRNCTTNLIAAGACLVCGVLYTATNRPLAAVALLVVL
Ga0179592_101354133	3300020199	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL
Ga0210407_110086461	3300020579	Soil	MKHCATNLIAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILGR
Ga0210403_111997852	3300020580	Soil	MKHRATNLIAAGACLACGILYTATNRPLAAVALLVVLGLANLAFILVR
Ga0210399_107671702	3300020581	Soil	MKCHNINLIAAGACLACGIAYTATDRPVAAIATLVVIGLANLAFILGR
Ga0210401_100410925	3300020583	Soil	MKCRNINLIAASACLVCGIAYTAADRPVTTIATLVVIGLANLAFILGR
Ga0210401_102019492	3300020583	Soil	MKCNNVNMIAAGACLVCGIAYTAANRPVIAIATLVVIGLANLAFILGR
Ga0210401_109911411	3300020583	Soil	MRNCTTNLIAASACLVCGVLYTATNRPLAAVTLLVVLGLA
Ga0215015_101043021	3300021046	Soil	MKHCATNLIAAGACLACGILYTITNRPLAAVALLVVLGLANLAFILVR
Ga0179584_12448462	3300021151	Vadose Zone Soil	MRHCATNLIAAGACPGLWKLLHVTNRPIAAVALLLVVLGLANLAFTSL
Ga0210406_107004562	3300021168	Soil	MKHRATNLIAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILVR
Ga0210396_101197244	3300021180	Soil	MKHCATNLIAAGACLVCGVLYTATNRPLAAVTLLVVLGLANLAFILAR
Ga0210396_108194621	3300021180	Soil	MKCNHVNLIAAGACLACGIAYTATNRPVTAIATLVVIGLANLAFILGR
Ga0210388_102248802	3300021181	Soil	MKCNHVNLIAAGACLVCGIAYTAANRPVIAIATLVVIGLANLAFILGR
Ga0213877_101056851	3300021372	Bulk Soil	MRYRAINLVAASACLGCGIAYTVANRPLTSIAILVVLGLANLAFILVR
Ga0210393_1000721011	3300021401	Soil	MKCRNINLIAAGACLACGIAYTAADRPVTTIATLAVIGLANLAFILGR
Ga0210386_110309961	3300021406	Soil	MRNCTTNLIAAGACLACGSFYTVTNRPIAAVAQLVVLGLANLAFTSL
Ga0210386_114378592	3300021406	Soil	MKHCATNLIAAGACLACGVLYTATNRPLAAVVLLVVLGLANLAFILVR
Ga0210386_115246972	3300021406	Soil	ACLVCGIAYTAANRPVIAIATLVVIGLANLAFILGR
Ga0210383_104083802	3300021407	Soil	MKCNHVNLIAAGACLVCGIAYTAANRPVIAIATVVVIGLANLAFILGR
Ga0210394_104389112	3300021420	Soil	MRSRTFNLVVAGACLACGIAYSVTGGPMTAIATLVALGLANLAFILAG
Ga0210394_111217691	3300021420	Soil	MKCGNINLIAAGACLACGIAYTVADRPVTTIVTIAVIGLANLAFILGR
Ga0210384_117250882	3300021432	Soil	MRSRTTNLIAAGACLACGVFYTATNQPLAAVALLVVLGLANLAFILVR
Ga0210391_115542931	3300021433	Soil	MKHCATNLIAAGACLACGILYTVTNRPLAAVVLMVVLGLANLAFILG
Ga0210390_100471315	3300021474	Soil	MKCHNINLIAAGACLIGGIAYTAANRPVTAIATIVVIGLANLAFVLGR
Ga0210398_104575002	3300021477	Soil	MKCNHVNLIAAGACLACGIAYTAANRPVTAIATLVVIGLANLAFILGR
Ga0210409_102152781	3300021559	Soil	MKHRATNLIAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILGR
Ga0126371_116356842	3300021560	Tropical Forest Soil	MKYRAINLVAASACLCCGIAYTVMNRPLTSIAILVVLGLANLALVLVR
Ga0242662_100684382	3300022533	Soil	MKHCATNLIAAGACLVCGVLYTATNRPLAAVVLLVVLGLANLAFILVR
Ga0257181_10707452	3300026499	Soil	RSRTTNLIAAGACLACGIFYTVTDRPLAAVALLVVLGLANLAFILVR
Ga0257168_10080741	3300026514	Soil	MRNCRTNLIAAGACLVCGVLYTATNRPLAAVALLVVLGLANLAFILVR
Ga0257168_10251882	3300026514	Soil	MRSRTTNLIAAGACLACGIFYTVTDRPLAAVALLVVLGLANLAFILVR
Ga0209330_11579412	3300027619	Forest Soil	MKCHNVNLIAAGACLACGIAYTAADRSVTIIATLVVIGLANLAFILGR
Ga0209588_10275672	3300027671	Vadose Zone Soil	MWHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTSL
Ga0209180_100191292	3300027846	Vadose Zone Soil	MRNCTTNLIATGACLVCGVLYTTTNRPLAVALLVVLGLANLAFILVR
Ga0209701_102295683	3300027862	Vadose Zone Soil	NLIAAGACLVCGVFYTATNRPLAAVALLVVLGLANLAFILVR
Ga0209590_106457031	3300027882	Vadose Zone Soil	MRHCATNLIAAGACLACGSFYTVTNRPIAAVALLVVLGLANLAFTAL
Ga0209380_101510112	3300027889	Soil	MRNCTTNLIAAGACLVCGILYTVTNRPLAAVALLVVLGLANLAFILAR
Ga0209488_100637143	3300027903	Vadose Zone Soil	MRNCTTNLIAAGACLVCGVLYTATNRPLAAVALLVVLGLANLAFILVR
Ga0075388_106954882	3300030848	Soil	MRHCAINLIAAGACLACGVLYTATNRPLAAVALLVVLGLANLAFILVR
Ga0170834_1119753112	3300031057	Forest Soil	MRNCATNLIAAGACLACGVLYTATNRPLAAVALLVVLGLANLAFILVR
Ga0310915_103912712	3300031573	Soil	MRQYTINLIAAGVCLACGIAYTAADRPPPTITTLVVLGIANLVFVLAR
Ga0310686_1060109061	3300031708	Soil	MKHRATNLIAAGACLACGVLYTATNRPLAAVTLLVVLGLANLAFILVR
Ga0307476_113145032	3300031715	Hardwood Forest Soil	MKHCATNLVAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILVR
Ga0307474_105713192	3300031718	Hardwood Forest Soil	KCHNVNLIAAGACLACGIFYTVANRPIAGIATLVVIGLANLAFILGR
Ga0307474_107675122	3300031718	Hardwood Forest Soil	MKHCATNLIAAGACLGCGILYTVTNRPLAAVVLLVVLGLANLAFILVR
Ga0307477_110682361	3300031753	Hardwood Forest Soil	IAAGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILVR
Ga0307475_108836621	3300031754	Hardwood Forest Soil	MRLRAINWIAAFACLSCAIGYTITNKPVSAIATLVVLGLANLAFILVR
Ga0307475_115390692	3300031754	Hardwood Forest Soil	MKHCATNLIAAGACLACGVLYTATNRPVAAVALLVVLGLVNLAFILVR
Ga0318521_108456292	3300031770	Soil	GAMRQYTINLIAAGVCLACGIAYTAADRPPPTITTLVVLGIANLVFVLAR
Ga0307473_105998532	3300031820	Hardwood Forest Soil	MRHCTTNLTAAGACLVCGVLYTATNRPLAAVALLVVLGLANLAFILAR
Ga0307478_113428852	3300031823	Hardwood Forest Soil	MKCRTFHLVVAGACLACGIAYSATGRPMSAIATLVVLGLANLAFILAG
Ga0306925_106748731	3300031890	Soil	MKYRAINLIAASACLCCGIAYTVANRPLTSIATLVVLGLANLAFILVR
Ga0310909_103418922	3300031947	Soil	MKYRAINLVAASACLCCGIVYTVTNRPLTSIAILVVLGLANLAFILAR
Ga0307479_105142931	3300031962	Hardwood Forest Soil	MKCGKINLIAAGACLACGIAYTVADRPVTTIAFVVVIGLANLAFILGR
Ga0307479_114728301	3300031962	Hardwood Forest Soil	AGACLACGILYTVTNRPLAAVVLLVVLGLANLAFILVR
Ga0307471_1001694563	3300032180	Hardwood Forest Soil	MSVAHRRDGIMRNCTTNLIAADACLACGVLYTATNRPLAAVALLVVLGLAILAFILVR
Ga0307471_1043258321	3300032180	Hardwood Forest Soil	MRRHIINLIAASACLACALAYTVANKPLVTIETLVVLGLANLA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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