NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F083999

Metagenome Family F083999

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083999
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 75 residues
Representative Sequence MDERRVRPRRLRHGRRLSDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD
Number of Associated Samples 71
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.11 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 81.25 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.536 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(49.107 % of family members)
Environment Ontology (ENVO) Unclassified
(53.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.393 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.73%    β-sheet: 21.15%    Coil/Unstructured: 72.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF13683rve_3 3.57
PF14018DUF4234 3.57
PF00248Aldo_ket_red 1.79
PF12697Abhydrolase_6 1.79
PF09579Spore_YtfJ 0.89
PF13191AAA_16 0.89
PF00582Usp 0.89
PF00196GerE 0.89
PF05378Hydant_A_N 0.89
PF12680SnoaL_2 0.89
PF03050DDE_Tnp_IS66 0.89
PF01966HD 0.89
PF14333DUF4389 0.89
PF13464DUF4115 0.89
PF12728HTH_17 0.89
PF00005ABC_tran 0.89
PF04828GFA 0.89
PF14534DUF4440 0.89
PF03979Sigma70_r1_1 0.89
PF12389Peptidase_M73 0.89
PF00561Abhydrolase_1 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0145N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunitAmino acid transport and metabolism [E] 1.79
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.89
COG3436TransposaseMobilome: prophages, transposons [X] 0.89
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.89

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.54 %
UnclassifiedrootN/A4.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01E0O3ZNot Available754Open in IMG/M
2170459015|G14TP7Y02G43B3All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium836Open in IMG/M
3300000956|JGI10216J12902_106992025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium877Open in IMG/M
3300004480|Ga0062592_100706661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium878Open in IMG/M
3300005172|Ga0066683_10103494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1729Open in IMG/M
3300005176|Ga0066679_10205171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1257Open in IMG/M
3300005179|Ga0066684_10011362All Organisms → cellular organisms → Bacteria4326Open in IMG/M
3300005180|Ga0066685_10286938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1138Open in IMG/M
3300005187|Ga0066675_10095799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1947Open in IMG/M
3300005444|Ga0070694_100910449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium726Open in IMG/M
3300005468|Ga0070707_100025038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5660Open in IMG/M
3300005468|Ga0070707_100170675All Organisms → cellular organisms → Bacteria2120Open in IMG/M
3300005518|Ga0070699_100060404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter3284Open in IMG/M
3300005556|Ga0066707_10125321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1605Open in IMG/M
3300005576|Ga0066708_10137969All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300005576|Ga0066708_10516885All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300006034|Ga0066656_10083287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1913Open in IMG/M
3300006796|Ga0066665_10100495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2120Open in IMG/M
3300006797|Ga0066659_10245807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1337Open in IMG/M
3300006852|Ga0075433_11009884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300006854|Ga0075425_100694557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1169Open in IMG/M
3300006904|Ga0075424_101913238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300009012|Ga0066710_101923997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium883Open in IMG/M
3300009012|Ga0066710_101953040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300009092|Ga0105250_10465934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300009100|Ga0075418_11968512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300009137|Ga0066709_100432664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1835Open in IMG/M
3300009147|Ga0114129_11174029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300009147|Ga0114129_11205757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium942Open in IMG/M
3300010301|Ga0134070_10249760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300010326|Ga0134065_10103307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium949Open in IMG/M
3300010329|Ga0134111_10288971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300010333|Ga0134080_10386739All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012019|Ga0120139_1081512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300012198|Ga0137364_10008266All Organisms → cellular organisms → Bacteria → Terrabacteria group5795Open in IMG/M
3300012199|Ga0137383_10134564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1806Open in IMG/M
3300012199|Ga0137383_10172886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1583Open in IMG/M
3300012199|Ga0137383_10554106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium841Open in IMG/M
3300012200|Ga0137382_10058544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2431Open in IMG/M
3300012200|Ga0137382_10512238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium853Open in IMG/M
3300012201|Ga0137365_10020870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium5090Open in IMG/M
3300012201|Ga0137365_10096158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2230Open in IMG/M
3300012201|Ga0137365_10127252All Organisms → cellular organisms → Bacteria → Terrabacteria group1915Open in IMG/M
3300012201|Ga0137365_10760178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium708Open in IMG/M
3300012201|Ga0137365_11245226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300012201|Ga0137365_11356007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300012202|Ga0137363_11205803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium643Open in IMG/M
3300012203|Ga0137399_10976495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300012206|Ga0137380_10208140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1772Open in IMG/M
3300012206|Ga0137380_11304529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300012206|Ga0137380_11610513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300012207|Ga0137381_10401154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1196Open in IMG/M
3300012207|Ga0137381_10755286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium844Open in IMG/M
3300012207|Ga0137381_11592536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300012208|Ga0137376_10911289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300012209|Ga0137379_10264537All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300012209|Ga0137379_10471593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1164Open in IMG/M
3300012210|Ga0137378_10183905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1944Open in IMG/M
3300012210|Ga0137378_10281251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1548Open in IMG/M
3300012210|Ga0137378_10331972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1414Open in IMG/M
3300012211|Ga0137377_10072818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3219Open in IMG/M
3300012211|Ga0137377_10452496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1222Open in IMG/M
3300012211|Ga0137377_10741175Not Available916Open in IMG/M
3300012211|Ga0137377_11230408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300012211|Ga0137377_11411022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium624Open in IMG/M
3300012211|Ga0137377_11815052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300012211|Ga0137377_11887021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300012211|Ga0137377_11961922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300012349|Ga0137387_10221875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1359Open in IMG/M
3300012350|Ga0137372_10025932All Organisms → cellular organisms → Bacteria5428Open in IMG/M
3300012350|Ga0137372_10067066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3104Open in IMG/M
3300012350|Ga0137372_10120160All Organisms → cellular organisms → Bacteria → Terrabacteria group2179Open in IMG/M
3300012350|Ga0137372_10902646Not Available626Open in IMG/M
3300012353|Ga0137367_10237032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1314Open in IMG/M
3300012354|Ga0137366_10171514All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300012354|Ga0137366_10217708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1422Open in IMG/M
3300012354|Ga0137366_10431299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300012354|Ga0137366_10945166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300012356|Ga0137371_10206099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1539Open in IMG/M
3300012356|Ga0137371_10335475Not Available1176Open in IMG/M
3300012356|Ga0137371_11201745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium566Open in IMG/M
3300012357|Ga0137384_10220726All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300012357|Ga0137384_10507776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia989Open in IMG/M
3300012359|Ga0137385_10074151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3025Open in IMG/M
3300012362|Ga0137361_11232024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300012532|Ga0137373_10318993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1229Open in IMG/M
3300012532|Ga0137373_10887481All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41655Open in IMG/M
3300012897|Ga0157285_10146185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300012899|Ga0157299_10248772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300013296|Ga0157374_10876446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium915Open in IMG/M
3300015077|Ga0173483_10224029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300015264|Ga0137403_10047548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4441Open in IMG/M
3300015358|Ga0134089_10200420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria803Open in IMG/M
3300018433|Ga0066667_10302449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1245Open in IMG/M
3300018433|Ga0066667_10947231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium742Open in IMG/M
3300018468|Ga0066662_12578395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300019362|Ga0173479_10748694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300020002|Ga0193730_1021614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1857Open in IMG/M
3300025910|Ga0207684_10118838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2265Open in IMG/M
3300025910|Ga0207684_11574793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300025922|Ga0207646_10064042All Organisms → cellular organisms → Bacteria3282Open in IMG/M
3300025922|Ga0207646_10066263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3224Open in IMG/M
3300026324|Ga0209470_1226058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300026327|Ga0209266_1166569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium864Open in IMG/M
3300026330|Ga0209473_1198694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium761Open in IMG/M
3300026528|Ga0209378_1047807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2099Open in IMG/M
3300026538|Ga0209056_10039078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4374Open in IMG/M
3300028787|Ga0307323_10245101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300028875|Ga0307289_10177444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium876Open in IMG/M
3300032180|Ga0307471_103515048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300033412|Ga0310810_11012808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium708Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil49.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.14%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.46%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_003265702170459015Switchgrass, Maize And Mischanthus LitterMDERRMRPRRLRHGRRLTDGTVVVTSYDEDGRVTNAIRYDESLEHVLEEIEGEAAEAAYGSRGADEVDSSEPVPTNFSDR
4PV_015600002170459015Switchgrass, Maize And Mischanthus LitterMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDETLEHVLEELEGDEAEAVFGTGKSEKSESPEEPDAAEGL
JGI10216J12902_10699202533300000956SoilMDKRRVRPRRLRHGRRLSDGTVVVISHADDGRVTHAIRSDESMEHVLGELEGEAAQAAYGIRGSGEIDSPAKLGAD*
Ga0062592_10070666123300004480SoilMNKRRVRPRRLRHGPRLSDGTVVVISHADDGRVTHAIRYDESMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD*
Ga0066683_1010349443300005172SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAHGEGGSDEVVLR*
Ga0066679_1020517133300005176SoilMNERRVRPRRLRRGRRLSDGTVLVTGHDDDGHLTDAIRYDESMDNVLEELEGEAARAAYGSRGSTEFESPEG*
Ga0066684_1001136233300005179SoilMDERRMRPRRPRHGRRLTDGTVVFISHDDDGRVTHAIRYDESMKHVLEELEGDAAEAGYGSRESEEIASTRV*
Ga0066685_1028693823300005180SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0066675_1009579913300005187SoilMDERRMRPRRPRHGRRLTDGTVVFISHDDEGRVTHAIRYDESMKHVLEELEGDAAEAVYGSRESEQIDSTRV*
Ga0070694_10091044913300005444Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRLRHGRRLSDGTVVVTTQDDDGRVIHAIRYDESMGNVLEELEDEAAEAAYGRRPSDEMDSPPEPGAD*
Ga0070707_10002503833300005468Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRPRHGRRLTDGTVVVTSHDDDGQVTHAIRYDESMEHVLEELDGEAAEAAYGIRGSECHSPTKSGPD*
Ga0070707_10017067533300005468Corn, Switchgrass And Miscanthus RhizosphereLGRCASAMDERRVRPRRLRQGRRLSDGTVVVTSQDDDARVTHAIRYDESMEHVLEVLEGEAAAEAAYGSRGSDEIESPAEPGAD*
Ga0070699_10006040463300005518Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRPRHGRRLTDGTVVVTSHDDDGRVTHAIRYVESMAHVLEEVEGEAAEAAYGIRGSEIHSPTKPGAD*
Ga0066707_1012532133300005556SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0066708_1013796933300005576SoilMRPRRPRHGRRLTDGTVVFISHDDDGRVTHAIRYDESMKHVLEELEGDAAEAGYGSRESEEIASTRV*
Ga0066708_1051688513300005576SoilRCRPAMDERRVRPRRLRHGRRLSDGTVLVTSHDDEGRVTHAIRYDESMEHVLEELEGAAAEVAYGRGSDEIESPDEPAA*
Ga0066656_1008328713300006034SoilGLGPTGIGSMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0066665_1010049533300006796SoilMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0066659_1024580733300006797SoilSAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0075433_1100988413300006852Populus RhizosphereAMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGRGADVIGGSRGTGR*
Ga0075425_10069455733300006854Populus RhizosphereMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGRGADVIGGSRGTGR*
Ga0075424_10191323813300006904Populus RhizosphereMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMERVLEELEGDEAEVVFGKGRSEKKESPEEPDAAEGR*
Ga0066710_10192399713300009012Grasslands SoilMRPRRPRHGRRLTDGTVVFISHDDEGRVTHAIRYDESMKHVLEELEGDAAEAVYGSRESEQIDSTRV
Ga0066710_10195304023300009012Grasslands SoilVRPRRLRHGRRLSDGTVLVTSHDDEGRVTHAIRYDESMEHVLEELEGAAAEVAYGRGSDEIESPDEPAA
Ga0105250_1046593413300009092Switchgrass RhizosphereMDERRVRPRRPRHGRRLSDGTVVITSHDDHGRVTHAIRYDESMGNVLEELEDEAAEAAYGRRPSDEMDSPPEPGAD*
Ga0075418_1196851213300009100Populus RhizosphereMDERRVRPRVLRHGRRLSDGSVVVTTQDDDGRVIRAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGR*
Ga0066709_10043266423300009137Grasslands SoilMDERRVRPRRPRHGRRLTDGTVVVTSHEDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGIRGSEIHSPTKPGAD*
Ga0114129_1117402913300009147Populus RhizosphereMDERRVRPRRLRRGRRLTDGTVVVTSHDEDGRVTHAIRYDESMEHVLEELEREAAEAAHGRGSDKIDSPAGPGAD*
Ga0114129_1120575713300009147Populus RhizosphereMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHALEELEGDEAEAVFGKGKSEKNESPEEPDAAEGR*
Ga0134070_1024976023300010301Grasslands SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDEGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEPGAD*
Ga0134065_1010330713300010326Grasslands SoilMASAMGDLRRVRPRRPRHGRRLSDGTVIVTTPDDDGRIVHAIRYDESMEQVLEELEGELAEAAYGEAEASRSSSVRN
Ga0134111_1028897123300010329Grasslands SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETA
Ga0134080_1038673913300010333Grasslands SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEPGAD*
Ga0120139_108151233300012019PermafrostMDERRVRPRRLRHGRRLTDGTVVVTSHDDEGRVSHAIRYDESMEHVLEELEGEAAEAAYGSRGSDEIDSPAEPGAD*
Ga0137364_1000826613300012198Vadose Zone SoilMDERRVRPRRLRQGRRLNDGTVLVTSHDEGRVTHAIRYDESMEHVLEELEGEAAEAAYGRRGRGEIDSPDEPAA*
Ga0137383_1013456413300012199Vadose Zone SoilMDERRVRPRRLRQVRRLSDGTVAVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRG
Ga0137383_1017288613300012199Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGL*
Ga0137383_1055410613300012199Vadose Zone SoilMASAMRDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0137382_1005854423300012200Vadose Zone SoilMDERRVRPRPLRHGRRLTDGTVVITSHDDDGRIIHAIRYDESMEHVLEELEGEAAEVAYGSRGGEEIDSPSEPGAD*
Ga0137382_1051223813300012200Vadose Zone SoilMDERRVRPRRLRHGRRLTDGTVVVISHDDEGRVSHAIRYDESMEHVLEELEGDAAEAAYGSRGSDEIDSPAEPGAD*
Ga0137365_1002087033300012201Vadose Zone SoilMDERRERPRRLRQGRRLSDGTVVVVSHDDEGRVNHAIRYDASMEHVLEELEGEAAEAAYGPQAKDETDPHADVDA*
Ga0137365_1009615843300012201Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVVISHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYRIRGSEEIDSPVEPGAD*
Ga0137365_1012725213300012201Vadose Zone SoilPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGRRGGDEIDSPAEPGAD*
Ga0137365_1076017813300012201Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAGEGR*
Ga0137365_1124522613300012201Vadose Zone SoilMDERRVRPRRLRHGRRFTDGTVVVTSHDDDGRVIHAIRYDESMQDVLEEVEGNAAEAAYGNRGSDELDSTPEC
Ga0137365_1135600713300012201Vadose Zone SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEDELAETAYGEGGSDEVVLR*
Ga0137363_1120580313300012202Vadose Zone SoilMRHGRRLSDGTVVVTSHDDDGRIIHAIRYDESMEDVLEELEGEAAEAAYGSRGGEEIDSPEPGAD*
Ga0137399_1097649513300012203Vadose Zone SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTRPDDNGQIVHAIRYDESMEQVLEELEGELAETAYGEGGSDEVVLR*
Ga0137380_1020814023300012206Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAGEGL*
Ga0137380_1130452923300012206Vadose Zone SoilMDERRVRPRHLRQGRRLTDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGSDEIDSPAEPGAD*
Ga0137380_1161051323300012206Vadose Zone SoilRRLSDDTVVVISHDDDGRVIHAIRYDESMEHVLEELEGEAAEAAYGIRGSEEIDSPVEPGAD*
Ga0137381_1040115423300012207Vadose Zone SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGCRGGDEIDSPAEPGAD*
Ga0137381_1075528623300012207Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVVISHDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYDSRGSDEIDSPAEPGAD*
Ga0137381_1159253613300012207Vadose Zone SoilPRRLRHGRRLTDGTVVITSHDDDGRIIHAIRYDESMEDVLEELEGEAAEAAYGSRGGDEIDSPAEPGAD*
Ga0137376_1091128913300012208Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGR*
Ga0137379_1026453723300012209Vadose Zone SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYCSRGGDEIDSPAEPGAD*
Ga0137379_1047159313300012209Vadose Zone SoilMDERRVRPRRPRHGRRLSDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYRIRGSEEIDSPVEPGAD*
Ga0137378_1018390523300012210Vadose Zone SoilMDKRRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAGEGR*
Ga0137378_1028125123300012210Vadose Zone SoilMDERRVRPRHLRQGRRLTDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEPGAD*
Ga0137378_1033197223300012210Vadose Zone SoilMDERRVRPRRLRHGRRLTDGTVVITSHDDDGRTVHAIRYDESIEHVLEKLEGEAAEVAYGSRGSEEINSPSEPGADELG*
Ga0137377_1007281823300012211Vadose Zone SoilMDLRRVRPRRPRYGRRLSDGTVVVISRDDAGRVIHAIHYDESMEHVLEELEGEAAEGAYGGGGEIDSAAGPGVD*
Ga0137377_1045249623300012211Vadose Zone SoilMDERRVRPRRLRQGRRLNDGTVLVTSHDEGRVTHAIRYDESMEHVLEELEGEAAEAAYGHRGSDEIDSPDEPAA*
Ga0137377_1074117523300012211Vadose Zone SoilMDERRVRPRRLRHGRRLTDGTVVVTSHDEDGRVTHAIRYDGSMEHVLEELEGEAAEAAHGSRG
Ga0137377_1123040813300012211Vadose Zone SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELA
Ga0137377_1141102213300012211Vadose Zone SoilMRHGRRLSDGTVVVTSHDDDGRVIHAIRYDESMEDVLEELEGEAAEAAYGSRGGDKTDQ*
Ga0137377_1181505213300012211Vadose Zone SoilRVRPRPLRHGRRLTDGTVVITSHDDDGRIIHAIRYDESMEHVLEELEGEAAEVAYGSRGGEEIDSPSEPGADELG*
Ga0137377_1188702123300012211Vadose Zone SoilMDERRVRPRRPRHGRRLTDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELLGEAAEAAYGIRGSEIHSSTKPGAD*
Ga0137377_1196192213300012211Vadose Zone SoilMDERRVRPRRLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGSDEIDSPAEPVPTNSDSESRRRAAHGERN*
Ga0137387_1022187523300012349Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVVISHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYRIRGSEEIDSAVEPGAD*
Ga0137372_1002593243300012350Vadose Zone SoilMDERRVRPRRLRRGRRLSDGTVVVTSYDDDGRVTHAIRYDESMEHVLEELEGEAAEAVYGGRGSDEIDSPAESRAD*
Ga0137372_1006706613300012350Vadose Zone SoilMDERRVRPRRPRHGRRLTDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGIRGSEIHSPTKPGAD*
Ga0137372_1012016013300012350Vadose Zone SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEPVPTNSDSESSRRAAHGERN*
Ga0137372_1090264613300012350Vadose Zone SoilGRRLSDGTVVVISHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD*
Ga0137367_1023703223300012353Vadose Zone SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDEGRVTHAIRYDESMEHVLEELEGEAAGAAYGIRGSDEIDSPAELGAD*
Ga0137366_1017151433300012354Vadose Zone SoilMDERRVRPRHLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEAGATNSDSESSR
Ga0137366_1021770823300012354Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVVISHDDDGRVTHAIRYDESMEHVLEELEGEAAQDPYRIRGSEEIDSPVEPGAD*
Ga0137366_1043129913300012354Vadose Zone SoilMDERRVRPRRPRHGRRLTDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGIRGSEIHSSTKPGAD*
Ga0137366_1094516613300012354Vadose Zone SoilMDERRVRPRPLRHGRRLTDGTVVITSHDDDGRIIHAIRYDESMEHVLEELEGEAAEVAYGSRGSEEIDSPSEPGAD*
Ga0137371_1012181423300012356Vadose Zone SoilLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAEGL*
Ga0137371_1020609913300012356Vadose Zone SoilMDERRERPRRLRHGRRLSDGTVVVTTHDEDGRVTYAIRYDESFDHVLEELEGEAAEAAYGKRGSDDADSPADPGAD*
Ga0137371_1033547523300012356Vadose Zone SoilMDERRPRPRRPRHGRRLTDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELKGEAAEAAYGIRGSEIHSSTKPGAD*
Ga0137371_1120174513300012356Vadose Zone SoilMDERRVRPRHLRQGRRLTDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGRRGGDEIDSPAEPGAD*
Ga0137384_1022072643300012357Vadose Zone SoilMDERRVRPRHLRQGRRLTDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGCRGSDEIDSPAEPGAD*
Ga0137384_1050777613300012357Vadose Zone SoilRRLTDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELEGEAAEAAYGSRGGDEIDSPAEPGAD*
Ga0137385_1007415133300012359Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNESPEEPDAAERL*
Ga0137361_1123202413300012362Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVVTSHDDDGRVTHAIRYDESMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD*
Ga0137373_1031899323300012532Vadose Zone SoilMDERRVRPRRLRHGRRLSDGTVVLISHDDDGQVSHAIRYDESMEHVLEELEGEAAQAAYGIRGSEEIDSPVEPGAD*
Ga0137373_1088748123300012532Vadose Zone SoilMDERRVRPRLLRHGRRLSDGSVVVTTQDDDGRVIHAIRYDASMEHVLEELEGDEAEAVFGKGKSEKNDSPEEPDAGEGL*
Ga0157285_1014618523300012897SoilMDERRVRPRRLRQGRRLSDGTVVVTSQDDDGRVTHAIRYDESMEHVLEELQGEAAKAAYGSRGSDEIDSPAEPGAD*
Ga0157299_1024877213300012899SoilMDERRVRPRRLRHGRQLSHGTVLVTSYDDDGRVIHAIRYDESMKHVIEELEGEEAEAAYGIRGSGEIDSPAKLGAD*
Ga0157374_1087644623300013296Miscanthus RhizosphereMDERRVRPRRLRHGRRLSDGTVVVTTQDDDGRVIHAIRYDESMGNVLEELEDEAAEAAYSRRPSDEMDSPPEPGAD*
Ga0173483_1022402923300015077SoilMDERRVRPRRLRHGRRLSDGAVVVISHADDGRVTHAIRYDELMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD*
Ga0137403_1004754863300015264Vadose Zone SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAYGEGGSDEVMLR*
Ga0134089_1020042013300015358Grasslands SoilMDERRMRPRRPRHGRRLTDGTVVVTSHEDDGRVIHAIRYDESMEHVLEELEGEAAEAAYGIRGSEIHSPTKPGAD*
Ga0066667_1030244933300018433Grasslands SoilFEADQIGRRVVACLNGGLGPTGIGSMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR
Ga0066667_1094723123300018433Grasslands SoilMRPRRPRHGRRLTDGTVVFISHDDDGRVTHAIRYDESMKHVLEELEGDAAEAGYGSRESEEIASTRV
Ga0066662_1257839513300018468Grasslands SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIATTPDDNARIVHPLPYHQSMEQVHEEPEGKLGRA
Ga0173479_1074869413300019362SoilMDERRVRPRRLRHGRRLSDGTVVVTSYDDDGRVTHAIRYDELMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD
Ga0193730_102161423300020002SoilVRPRRLRHGRRLSDGTVVVTSQDDDGRVIHAIRYDELMEHVLEDLKGEAAEAAYGSRANVEVDSPAEPGAD
Ga0207684_1011883823300025910Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRLRHGRRLSDGTVVVTTQDDDGRVIHAIRYDESMGNVLEELEDEAAEAAYGRRPSDEMDSPPEPGAN
Ga0207684_1157479313300025910Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRPRHGRRLSDGTVVITSHDDHGRVTHAIRYDESMEHVLEELEGEAAEDAYGGRGTDKIESPAEPGAD
Ga0207646_1006404233300025922Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRLRHGRRLSDGTVVVTTQDDDGRVIHAIRYDESMGNVLEELEDEAAEAAYGRRPSDEMDSPPEPGAD
Ga0207646_1006626353300025922Corn, Switchgrass And Miscanthus RhizosphereMDERRVRPRRLRQGRRLSDGTVVVTSQDDDARVTHAIRYDESMEHVLEVLEGEAAAEAAYGSRGSDEIESPAEPGAD
Ga0209470_122605813300026324SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAHGEGGSDEVVLR
Ga0209266_116656923300026327SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVVEELEGELAETAYGEGGNDEVVLR
Ga0209473_119869413300026330SoilRPRRPRHGRRLTDGTVVFISHDDDGRVTHAIRYDESMKHVLEELEGDAAEAGYGSRESEEIASTRV
Ga0209378_104780713300026528SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDESMEQVLEELEGELAETAYGE
Ga0209056_1003907833300026538SoilMASAMGDLGHVRPRRPRQGRRLSDGTVIVTTPDDNGRIVHAIRYDQSMEQVLEELEGELAETAYGEGGSDEVVLR
Ga0307323_1024510113300028787SoilMDERRVRPRRLRHGRRLSDGTVLVTSYDDDGRVIHAIRYDESMKHVLEELEGEAAEAAYGIRGSDEIGLPEESGAD
Ga0307289_1017744423300028875SoilMDERRVRPRRLRHGRRLTDGTVVVISHDDEGRVSHAIRYDESMEHVLEELEGDAAEAAYGSGGSEIDAPTKPGAD
Ga0307471_10351504813300032180Hardwood Forest SoilMDERRVRPRRPRHGRRLSDGTVVVTSHDDHGRVTHAIRYDESMEHVLEELEGEAAEDAYGSRGTDKIESPAEPGAD
Ga0310810_1101280813300033412SoilMDKRRVRPRRLRHGRRLSDGAVVVISHADDGRVTHAIRYDELMEHVLEELEGEAAQAAYGIRGSDEIDSPAEPGAD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.