Basic Information | |
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Family ID | F084067 |
Family Type | Metagenome |
Number of Sequences | 112 |
Average Sequence Length | 84 residues |
Representative Sequence | MKRSPLLRLLLAIVDAGWWLAPPSRRRAWRRQWRADILHEWQWLARHPRGVGDRASLVVRAAGALRHAFWLRLHVRRLEM |
Number of Associated Samples | 89 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 46.43 % |
% of genes near scaffold ends (potentially truncated) | 98.21 % |
% of genes from short scaffolds (< 2000 bps) | 94.64 % |
Associated GOLD sequencing projects | 80 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (93.750 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (13.393 % of family members) |
Environment Ontology (ENVO) | Unclassified (54.464 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (71.429 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 61.11% β-sheet: 0.00% Coil/Unstructured: 38.89% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 112 Family Scaffolds |
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PF03551 | PadR | 77.68 |
PF02687 | FtsX | 6.25 |
PF12704 | MacB_PCD | 4.46 |
PF00326 | Peptidase_S9 | 2.68 |
PF13419 | HAD_2 | 1.79 |
PF00144 | Beta-lactamase | 1.79 |
PF03950 | tRNA-synt_1c_C | 0.89 |
PF07676 | PD40 | 0.89 |
COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
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COG1695 | DNA-binding transcriptional regulator, PadR family | Transcription [K] | 77.68 |
COG1733 | DNA-binding transcriptional regulator, HxlR family | Transcription [K] | 77.68 |
COG1846 | DNA-binding transcriptional regulator, MarR family | Transcription [K] | 77.68 |
COG1680 | CubicO group peptidase, beta-lactamase class C family | Defense mechanisms [V] | 1.79 |
COG1686 | D-alanyl-D-alanine carboxypeptidase | Cell wall/membrane/envelope biogenesis [M] | 1.79 |
COG2367 | Beta-lactamase class A | Defense mechanisms [V] | 1.79 |
COG0008 | Glutamyl- or glutaminyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 0.89 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 93.75 % |
Unclassified | root | N/A | 6.25 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2140918013|NODE_6859_length_2104_cov_7.457700 | All Organisms → cellular organisms → Bacteria | 2136 | Open in IMG/M |
3300000363|ICChiseqgaiiFebDRAFT_14072353 | All Organisms → cellular organisms → Bacteria | 556 | Open in IMG/M |
3300000363|ICChiseqgaiiFebDRAFT_14350065 | All Organisms → cellular organisms → Bacteria | 977 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101523028 | All Organisms → cellular organisms → Bacteria | 1393 | Open in IMG/M |
3300004156|Ga0062589_100399595 | All Organisms → cellular organisms → Bacteria | 1115 | Open in IMG/M |
3300004157|Ga0062590_102090979 | All Organisms → cellular organisms → Bacteria | 590 | Open in IMG/M |
3300004463|Ga0063356_101480795 | All Organisms → cellular organisms → Bacteria | 1004 | Open in IMG/M |
3300004463|Ga0063356_104496637 | All Organisms → cellular organisms → Bacteria | 600 | Open in IMG/M |
3300004463|Ga0063356_106003843 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 521 | Open in IMG/M |
3300005093|Ga0062594_101061820 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 786 | Open in IMG/M |
3300005328|Ga0070676_11041619 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 616 | Open in IMG/M |
3300005329|Ga0070683_101007584 | All Organisms → cellular organisms → Bacteria | 800 | Open in IMG/M |
3300005331|Ga0070670_100333728 | All Organisms → cellular organisms → Bacteria | 1330 | Open in IMG/M |
3300005331|Ga0070670_101221561 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 687 | Open in IMG/M |
3300005334|Ga0068869_101457875 | All Organisms → cellular organisms → Bacteria | 607 | Open in IMG/M |
3300005343|Ga0070687_100653279 | All Organisms → cellular organisms → Bacteria | 729 | Open in IMG/M |
3300005344|Ga0070661_100275371 | All Organisms → cellular organisms → Bacteria | 1304 | Open in IMG/M |
3300005353|Ga0070669_101536437 | All Organisms → cellular organisms → Bacteria | 579 | Open in IMG/M |
3300005354|Ga0070675_101007595 | All Organisms → cellular organisms → Bacteria | 765 | Open in IMG/M |
3300005364|Ga0070673_102302738 | All Organisms → cellular organisms → Bacteria | 512 | Open in IMG/M |
3300005459|Ga0068867_101985342 | All Organisms → cellular organisms → Bacteria | 550 | Open in IMG/M |
3300005471|Ga0070698_101468336 | All Organisms → cellular organisms → Bacteria | 633 | Open in IMG/M |
3300005526|Ga0073909_10243313 | All Organisms → cellular organisms → Bacteria | 796 | Open in IMG/M |
3300005536|Ga0070697_101983185 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 521 | Open in IMG/M |
3300005543|Ga0070672_100875509 | All Organisms → cellular organisms → Bacteria | 793 | Open in IMG/M |
3300005547|Ga0070693_100993777 | All Organisms → cellular organisms → Bacteria | 634 | Open in IMG/M |
3300005548|Ga0070665_102142011 | All Organisms → cellular organisms → Bacteria | 563 | Open in IMG/M |
3300005549|Ga0070704_102252534 | All Organisms → cellular organisms → Bacteria | 507 | Open in IMG/M |
3300005553|Ga0066695_10725162 | Not Available | 580 | Open in IMG/M |
3300005555|Ga0066692_10624690 | All Organisms → cellular organisms → Bacteria | 674 | Open in IMG/M |
3300005578|Ga0068854_100479131 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1044 | Open in IMG/M |
3300005578|Ga0068854_102048678 | All Organisms → cellular organisms → Bacteria | 528 | Open in IMG/M |
3300005616|Ga0068852_101819321 | All Organisms → cellular organisms → Bacteria | 631 | Open in IMG/M |
3300005617|Ga0068859_102019845 | All Organisms → cellular organisms → Bacteria | 637 | Open in IMG/M |
3300005842|Ga0068858_100615669 | All Organisms → cellular organisms → Bacteria | 1054 | Open in IMG/M |
3300005842|Ga0068858_100746124 | All Organisms → cellular organisms → Bacteria | 954 | Open in IMG/M |
3300005843|Ga0068860_101465795 | All Organisms → cellular organisms → Bacteria | 704 | Open in IMG/M |
3300005843|Ga0068860_101824425 | All Organisms → cellular organisms → Bacteria | 630 | Open in IMG/M |
3300005844|Ga0068862_102665529 | Not Available | 511 | Open in IMG/M |
3300006049|Ga0075417_10418801 | All Organisms → cellular organisms → Bacteria | 665 | Open in IMG/M |
3300006755|Ga0079222_11137325 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 691 | Open in IMG/M |
3300006852|Ga0075433_11326168 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 623 | Open in IMG/M |
3300006854|Ga0075425_100263870 | All Organisms → cellular organisms → Bacteria | 1981 | Open in IMG/M |
3300006854|Ga0075425_102405534 | All Organisms → cellular organisms → Bacteria | 584 | Open in IMG/M |
3300006854|Ga0075425_102818248 | All Organisms → cellular organisms → Bacteria | 535 | Open in IMG/M |
3300006880|Ga0075429_101528042 | All Organisms → cellular organisms → Bacteria | 581 | Open in IMG/M |
3300006881|Ga0068865_100501402 | All Organisms → cellular organisms → Bacteria | 1012 | Open in IMG/M |
3300009090|Ga0099827_11329094 | All Organisms → cellular organisms → Bacteria | 625 | Open in IMG/M |
3300009137|Ga0066709_102118439 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 777 | Open in IMG/M |
3300009156|Ga0111538_11884921 | All Organisms → cellular organisms → Bacteria | 752 | Open in IMG/M |
3300009162|Ga0075423_10035481 | All Organisms → cellular organisms → Bacteria | 5078 | Open in IMG/M |
3300010362|Ga0126377_13082120 | Not Available | 538 | Open in IMG/M |
3300010397|Ga0134124_10768103 | All Organisms → cellular organisms → Bacteria | 960 | Open in IMG/M |
3300011269|Ga0137392_11134163 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. | 639 | Open in IMG/M |
3300012350|Ga0137372_10552002 | All Organisms → cellular organisms → Bacteria | 851 | Open in IMG/M |
3300012901|Ga0157288_10144671 | All Organisms → cellular organisms → Bacteria | 702 | Open in IMG/M |
3300012922|Ga0137394_11433115 | All Organisms → cellular organisms → Bacteria | 551 | Open in IMG/M |
3300012925|Ga0137419_11831845 | All Organisms → cellular organisms → Bacteria | 520 | Open in IMG/M |
3300013296|Ga0157374_10014202 | All Organisms → cellular organisms → Bacteria | 6963 | Open in IMG/M |
3300013296|Ga0157374_11121704 | All Organisms → cellular organisms → Bacteria | 807 | Open in IMG/M |
3300013308|Ga0157375_12692076 | All Organisms → cellular organisms → Bacteria | 595 | Open in IMG/M |
3300014326|Ga0157380_13268393 | Not Available | 518 | Open in IMG/M |
3300014968|Ga0157379_11418874 | All Organisms → cellular organisms → Bacteria | 673 | Open in IMG/M |
3300014969|Ga0157376_11997245 | All Organisms → cellular organisms → Bacteria | 618 | Open in IMG/M |
3300015371|Ga0132258_12049749 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1439 | Open in IMG/M |
3300015371|Ga0132258_12456000 | All Organisms → cellular organisms → Bacteria | 1304 | Open in IMG/M |
3300015372|Ga0132256_103456712 | All Organisms → cellular organisms → Bacteria | 531 | Open in IMG/M |
3300015373|Ga0132257_101300048 | All Organisms → cellular organisms → Bacteria | 923 | Open in IMG/M |
3300018081|Ga0184625_10031499 | All Organisms → cellular organisms → Bacteria | 2597 | Open in IMG/M |
3300018920|Ga0190273_12200090 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 518 | Open in IMG/M |
3300019879|Ga0193723_1040745 | All Organisms → cellular organisms → Bacteria | 1382 | Open in IMG/M |
3300020003|Ga0193739_1141813 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
3300021178|Ga0210408_10878331 | All Organisms → cellular organisms → Bacteria | 699 | Open in IMG/M |
3300021432|Ga0210384_11065372 | All Organisms → cellular organisms → Bacteria | 711 | Open in IMG/M |
3300021559|Ga0210409_10441585 | All Organisms → cellular organisms → Bacteria | 1161 | Open in IMG/M |
3300025907|Ga0207645_10670317 | All Organisms → cellular organisms → Bacteria | 705 | Open in IMG/M |
3300025918|Ga0207662_10559215 | All Organisms → cellular organisms → Bacteria | 793 | Open in IMG/M |
3300025920|Ga0207649_10554367 | All Organisms → cellular organisms → Bacteria | 880 | Open in IMG/M |
3300025920|Ga0207649_11434314 | All Organisms → cellular organisms → Bacteria | 546 | Open in IMG/M |
3300025930|Ga0207701_10886334 | All Organisms → cellular organisms → Bacteria | 748 | Open in IMG/M |
3300025933|Ga0207706_10317740 | All Organisms → cellular organisms → Bacteria | 1355 | Open in IMG/M |
3300025934|Ga0207686_10015749 | All Organisms → cellular organisms → Bacteria | 4235 | Open in IMG/M |
3300025936|Ga0207670_10724106 | All Organisms → cellular organisms → Bacteria | 825 | Open in IMG/M |
3300025938|Ga0207704_10520427 | All Organisms → cellular organisms → Bacteria | 962 | Open in IMG/M |
3300025939|Ga0207665_11473108 | All Organisms → cellular organisms → Bacteria | 541 | Open in IMG/M |
3300025960|Ga0207651_11817326 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300025961|Ga0207712_11213733 | All Organisms → cellular organisms → Bacteria | 673 | Open in IMG/M |
3300025961|Ga0207712_11354894 | All Organisms → cellular organisms → Bacteria | 636 | Open in IMG/M |
3300025961|Ga0207712_12093820 | All Organisms → cellular organisms → Bacteria | 506 | Open in IMG/M |
3300025981|Ga0207640_10974974 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 744 | Open in IMG/M |
3300026035|Ga0207703_10476396 | All Organisms → cellular organisms → Bacteria | 1169 | Open in IMG/M |
3300026035|Ga0207703_11007202 | All Organisms → cellular organisms → Bacteria | 799 | Open in IMG/M |
3300026035|Ga0207703_11300381 | All Organisms → cellular organisms → Bacteria | 699 | Open in IMG/M |
3300026035|Ga0207703_12267172 | All Organisms → cellular organisms → Bacteria | 519 | Open in IMG/M |
3300026035|Ga0207703_12396612 | Not Available | 503 | Open in IMG/M |
3300026095|Ga0207676_10997192 | All Organisms → cellular organisms → Bacteria | 825 | Open in IMG/M |
3300026142|Ga0207698_11645926 | All Organisms → cellular organisms → Bacteria | 657 | Open in IMG/M |
3300026142|Ga0207698_12375526 | Not Available | 541 | Open in IMG/M |
3300027560|Ga0207981_1037133 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 887 | Open in IMG/M |
3300027835|Ga0209515_10060468 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2806 | Open in IMG/M |
3300028381|Ga0268264_11313660 | All Organisms → cellular organisms → Bacteria | 733 | Open in IMG/M |
3300028381|Ga0268264_11964836 | All Organisms → cellular organisms → Bacteria | 594 | Open in IMG/M |
3300028381|Ga0268264_12483470 | All Organisms → cellular organisms → Bacteria | 524 | Open in IMG/M |
3300028819|Ga0307296_10536361 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 640 | Open in IMG/M |
3300028819|Ga0307296_10751816 | Not Available | 532 | Open in IMG/M |
3300031913|Ga0310891_10312640 | All Organisms → cellular organisms → Bacteria | 556 | Open in IMG/M |
3300031940|Ga0310901_10135840 | All Organisms → cellular organisms → Bacteria | 928 | Open in IMG/M |
3300031944|Ga0310884_10486906 | All Organisms → cellular organisms → Bacteria | 722 | Open in IMG/M |
3300032163|Ga0315281_10477144 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 1331 | Open in IMG/M |
3300032163|Ga0315281_11448571 | All Organisms → cellular organisms → Bacteria | 675 | Open in IMG/M |
3300032174|Ga0307470_11272704 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300032179|Ga0310889_10176549 | All Organisms → cellular organisms → Bacteria | 973 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 13.39% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.14% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 5.36% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 5.36% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.36% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.46% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.46% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.57% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.57% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.57% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.57% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.57% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.68% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.68% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.68% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.68% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.68% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 1.79% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.79% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.89% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.89% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.89% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.89% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.89% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.89% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.89% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.89% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2140918013 | Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies) | Environmental | Open in IMG/M |
3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
3300020003 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2 | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
3300027835 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Iowa-Corn-GraphCirc_00166360 | 2140918013 | Soil | MPNRRRDAGLLLRLFLAIIDLVRWVAPVARRREWRRQWRADIWHEWQWLSGHRRGIGDRVALATRVTGAVRHAFWLRMHVRRLEMITHDLRYGWRXXXXX |
ICChiseqgaiiFebDRAFT_140723532 | 3300000363 | Soil | LRVLLAIIDTGWWLAPPARRKEWRRQWRADILHEWRWIARHPQGIGDHAGILRRAAGAL |
ICChiseqgaiiFebDRAFT_143500652 | 3300000363 | Soil | MPNRRRDAGLLLRLFLAIIDLVRWVAPVARRREWRRQWRADIWHEWQWLSGHRRGIGDRVALATRVTGAVRHAFWLRMHVRRLEMITHDLRYGWRQMLRRPGLSA |
INPhiseqgaiiFebDRAFT_1015230284 | 3300000364 | Soil | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVTAHQPGLGARAGVMRRAIGAFRHAFLLRMHVRRVEMITHDLRY |
Ga0062589_1003995951 | 3300004156 | Soil | MRPDARTPRREPRTPTLLRLLLAIIDAAWWLAPASRRRDWRRQWRADILHEWQRRSRHPRGVGDRASLVAHASGAPRHAFWLRLHVRRLEMITQD |
Ga0062590_1020909791 | 3300004157 | Soil | MSRPDGPLLRLLLAVIDAGRWLAPPARRRDWRRQWRADILHEWQWLTRHPKGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMI |
Ga0063356_1014807953 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKSPLLRVLLAVIDTARWLAPPSRRREWRNQWRADIWHEWNWIAGHQCGIVERASLARRIGGAVRHAFWLRMHVRRLEMITHDIRYGWRLMVRKPGFTILA |
Ga0063356_1044966372 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTPKKRELGLLLRSMLGVIDLARWLAPPSRRREWRRQWRADIWHEWQWMADGRRSIVERASLARRIGGAVRHAFWLRVHVRRLEMITHDLRYGWRQM |
Ga0063356_1060038432 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTKKKRDLGLLLRSMLGVIDLARWLAPPSRRREWRRQWRADIWHEWHWMAGGQRGIVERASLARRIGGAVRHAFWLRLHVRRLEMITHDLRYGWRQM |
Ga0062594_1010618202 | 3300005093 | Soil | MSPAGRDGVFLRLLLRIVDAGWWLAPPSRRREWRRQWRADIWHESRWLARQHGVAARAGLAVTTLGALRH |
Ga0070676_110416192 | 3300005328 | Miscanthus Rhizosphere | MRLLLRLLLAMIDLGARLAPRSRRRAWRRQWRADIVHEWQWLRRQQRGAAEQATLLRRVAGALRHAFWLRLHVRRLEMITQDILYGWRLMLRKPAFTLVA |
Ga0070683_1010075843 | 3300005329 | Corn Rhizosphere | MQRNGLLRLLLAIIDAGRWLAPAARRRDWRRQWRADILHEWQWLTRHPESGDRAGLIVRTGGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPAFTIVAVLTLGLGI |
Ga0070670_1003337281 | 3300005331 | Switchgrass Rhizosphere | VGKTPLLRVLLAIIDTGWWLAPPARRKEWRRQWRADILHEWQWRTRHPQGVGDRVGLIGRAVGGLRHAFWLRLHVRSLEMITQDIRYGWR |
Ga0070670_1012215612 | 3300005331 | Switchgrass Rhizosphere | MSPQGRSGGFLRLLLRIVDAGWWLAPPSRRREWRRQWRADIWHESQWISERRPGLAARTALAKRTLGALRHALWLRGHVRRVEMLTQDLRYGW |
Ga0068869_1014578752 | 3300005334 | Miscanthus Rhizosphere | MSEGRPTSHLLRLLLAIVDAGRWLAPPSRRRVWRRQWRADIVHQWQWLARHPRGVGAHAQLLARAASAPRHAFSLRLHVRRLEMITQDIRY |
Ga0070687_1006532791 | 3300005343 | Switchgrass Rhizosphere | MTAKPRGLLGLLLAVVDAGRWLAPPSRRREWRRQWRADIWHQWHWMAGHDASLANRASLARRTAGAFRHAFWLRLHVRRV |
Ga0070661_1002753713 | 3300005344 | Corn Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRH |
Ga0070669_1015364371 | 3300005353 | Switchgrass Rhizosphere | MRRNPLLRLLLAIIDLGRWLAPPSRRRDWRRQWRADILHEWQWRTRDPKGVADRASLFVRAGGALRHAFWLRLHVRRL |
Ga0070675_1010075952 | 3300005354 | Miscanthus Rhizosphere | MRRNPLLGLLLAIIDAGRWLAPPSRRRDWRRQWRADILHEWQWLTRHPKGAGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPAF |
Ga0070673_1023027382 | 3300005364 | Switchgrass Rhizosphere | VHGPLLRFLLAVIDAGWWLAPPSRRREWRQQWRADIVHEWQWLRRQQRGAAEQATLLRRVAGALRHAFWLRLHVRRLE |
Ga0068867_1019853422 | 3300005459 | Miscanthus Rhizosphere | MSPRRGPLLRLLLAIVDAGWWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAGLFVRVAGALRH |
Ga0070698_1014683362 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MPKSPLLRVLLAIIDTGWWLAPPARRKEWRRQWRADILHEWQWRTRHPRGVGDRVGLIGRAAGGLRHAFWLRLHVRSLEMITQD |
Ga0073909_102433132 | 3300005526 | Surface Soil | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVTTHQPGLGARAGVMRRASGAFRHALLLRMHVRRVEMITHD |
Ga0070697_1019831851 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRTRGPLLRFLLAIVDLARWLAPPSRRRDWRQQWRADIWHESRWLSRRSSGIVPHATLVARTAGALRHAFWLRLHVRKLEMITQDVRYGWR |
Ga0070672_1008755091 | 3300005543 | Miscanthus Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLARHPKGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDI |
Ga0070693_1009937772 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MSPRRGPLLRLLLAIVDAGWWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAGLFVRVAGALRHAFWLRLHVRRL |
Ga0070665_1021420112 | 3300005548 | Switchgrass Rhizosphere | VHGPLLRFLLAVIDAGWWLAPPSRRREWRQQWRADIVHEWQWLRRQQRGAAEQATLLRRVAGALRHAFWLRLH |
Ga0070704_1022525341 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWQWMADGRRGIVERASLARRIGGAVRHAFWLRVHV |
Ga0066695_107251622 | 3300005553 | Soil | VLLAIVDLGWWLAPPSRRRQWRRQWRADILHEWQWLARHPRGVGDRAGLVTRAAGALRHAFWLRLHVRRIEMITQD |
Ga0066692_106246902 | 3300005555 | Soil | VLKFLLAIINAGRWLAPPSRRKEWRRQWRADILHEWRWRTQHPRGVGDRVGLLGRTAGGLRHAFW |
Ga0068854_1004791314 | 3300005578 | Corn Rhizosphere | MSAQDREPRTSVLLRLLFAIIDTGWWLAPPSHRRAWRRQWRADLVHEWRWLARTRAGVGGRATLLRRASG |
Ga0068854_1020486781 | 3300005578 | Corn Rhizosphere | MQRNGLLRLLLAIIDAGRWLAPAARRRDWRRQWRADILHEWQWLTRHPESGDRAGLIVRTGGALRHAFWLRLHVRRLEMIAQDIRYGWRLMVRKP |
Ga0068852_1018193211 | 3300005616 | Corn Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRHAFWLRLHVRR |
Ga0068859_1020198452 | 3300005617 | Switchgrass Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLTRHPKGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDI |
Ga0068858_1006156691 | 3300005842 | Switchgrass Rhizosphere | LLAIVNAGQWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAALLVRAAGALRHAL |
Ga0068858_1007461243 | 3300005842 | Switchgrass Rhizosphere | MLKFLLAVINAGRWLAPPSRRKAWRRQWRADVAHEWRWIEQRESGIGARAGLVARVAGALRHAFWLRMHVRRIEMITQDIRYGWRLM |
Ga0068860_1014657951 | 3300005843 | Switchgrass Rhizosphere | MTRHPLLRLLLAIVDLGFWLAPPSRRRDWRRQWRADILHEWQWLTRHPKGAGDRAGLFVRATGALRHAFLLRLHVRRLEMITQ |
Ga0068860_1018244252 | 3300005843 | Switchgrass Rhizosphere | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVTAHQPGLGARAGVMRRASGAFRHAFLLRMHVRRVEMITHDLRYGWRQM |
Ga0068862_1026655291 | 3300005844 | Switchgrass Rhizosphere | MTNTNGGGRPPKHERRTPALLRLLLAIIDTGWWLAPPSRRRDWRQQWRADILHEWRWITRHPRGIGDRAGILRRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRRP |
Ga0075417_104188011 | 3300006049 | Populus Rhizosphere | LLAVIDAGRWLAPRSRRRDWRRQWRADIWHEWRWIDRDPHRAGDRAALVRRTAGALRHAVWLRLHVR |
Ga0079222_111373251 | 3300006755 | Agricultural Soil | MLLRILLAIINAGRWLAPPSRRREWRRQWRADILHEWQWRRRHPRGLGDGVDLLGRAAGGLHHAFWLRLHVRRLEMITQDIRYGWRLMVRKPGFAIVS |
Ga0075433_113261681 | 3300006852 | Populus Rhizosphere | MSKRSTDRVPGWLLRIIDIGRWIAPPSRRREWRRQWRADIWHEWNRLARQSRGVAARATLAGRLPGALRHAFWLRSHVKQVE |
Ga0075425_1002638704 | 3300006854 | Populus Rhizosphere | VLLRLLLALIDAGARLAPASRRRGWRRQWRADILHEWRWLSGRRAGLAARATLVRRATGALRHAFWLRLHVRRLEM |
Ga0075425_1024055342 | 3300006854 | Populus Rhizosphere | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVTAHQPGLGARAGVMRRAAGAFRHAFL |
Ga0075425_1028182481 | 3300006854 | Populus Rhizosphere | MTDKPRGLLGLLLAVVDAGRWLAPPSRRREWRRQWRADIWHQWHWIARREASFADRASLARRTAGAFRHAFWLRLHVRRV |
Ga0075429_1015280421 | 3300006880 | Populus Rhizosphere | MAPRLNPLLRVLYAVIDAGRWLAPPSRRREWRRQWRADVAHEWQWMEKQHRGFAARVGLAARVAGALGHAYWLRRHIRRIDMITQDLRYGWRLM |
Ga0068865_1005014021 | 3300006881 | Miscanthus Rhizosphere | MTNTNGDGRSPKHERRTPALLRVLLAIIDTGWWLAPPSRRRDWRQQWRADILHEWRWITRHPRGIGDRAGILRRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMV |
Ga0099827_113290942 | 3300009090 | Vadose Zone Soil | MAPRVNPFARALLAVINAGRWLAPKSRRREWRRQWRADVAHETQWLQRHPRGIASRATLVARVAGALRHAFWLRMH |
Ga0066709_1021184392 | 3300009137 | Grasslands Soil | MAARRGPLLRLLLAIIDAGRWLAPASRRRDWRRQWRADILHEWQWLAGRPRDIRAGARLVGRVAGALRHAFWLRLHVRSLEMITHDLRYGWRLMVRKPGFTAVAVLTLGLGI |
Ga0111538_118849212 | 3300009156 | Populus Rhizosphere | MLKFLLAIINAGRWLAPPSRRKEWRRQWRADVSHEWRWIERRDSGIAARAGLVARVAGAFRHAFWLRMHVRRIEMI |
Ga0075423_100354815 | 3300009162 | Populus Rhizosphere | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIEQRESGIGARAGLVARVFGALRHAFWLRMHVRRIEMITQDI |
Ga0126377_130821202 | 3300010362 | Tropical Forest Soil | MNRAPGPLMRVLLAVIDLGRWLAPPSRRRQWRRQWRADIWHESQWLDREMRGVAGHATLVGRTAGALRHAFWLRLHVRNVEMITHDLRYGWRLMVR |
Ga0134124_107681033 | 3300010397 | Terrestrial Soil | LLAIIDAGRWLAPASRRRDWRRQWRADILNEWQWLTRHPKGVGDRAGLFVRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVCKPA |
Ga0137392_111341632 | 3300011269 | Vadose Zone Soil | LLLAVIDTGWKLAPPSRRREWRRQWRADILHEWRWLAGRQRGIGDRAVLLRRVAGALRHAFWLRTHVRGLEMITQDIRYGW |
Ga0137372_105520022 | 3300012350 | Vadose Zone Soil | VKKSPLLRVLLAVIDTGRWLAPPSRRREWRRQWRADIWHEWQWIAGHRRGVAGPATLAARTAGALRHAFWLRMHVRRLEMITQDLR |
Ga0157288_101446712 | 3300012901 | Soil | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVTAHQPGLGARAGVMRRAAGAFRHAFLLRMHVRRVEMITHDLRYGWRQMV |
Ga0137394_114331152 | 3300012922 | Vadose Zone Soil | MTPRKGPLLRLLLGIIDTGWWLAPASRRREWRRQWRADILHEWQWRTTHPRGVGDRVGLVGRAAGAWRHAFWLRLHVRSLE |
Ga0137419_118318451 | 3300012925 | Vadose Zone Soil | MSEGPLLRVLLAIVNAGWWLAPRSRRRDWRRQWRADILHEWQWLARHPRGAGDRAGLLLRAAGALRHA |
Ga0157374_100142021 | 3300013296 | Miscanthus Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRQPRGHGDRAGLFVRTAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRRP |
Ga0157374_111217043 | 3300013296 | Miscanthus Rhizosphere | VLLAIVNAGWWLAPPSRRRDWRRQWRADIVHEWQWLARHPRGAGDRAGLLLRAAGALRHAFWLRLHVRRLEMITQDIRYGW |
Ga0157375_126920761 | 3300013308 | Miscanthus Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLARHPKGVGDRAGLFVRAGGALR |
Ga0157380_132683931 | 3300014326 | Switchgrass Rhizosphere | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIEQRESGIGARAGLVARVAGALRHAFWLRMHVRRIEMITQDIRYGWRLMVRKP |
Ga0157379_114188741 | 3300014968 | Switchgrass Rhizosphere | MSRRSGPLLRLLLAIVDAGWWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAGLFVRVAGALRHA |
Ga0157376_119972452 | 3300014969 | Miscanthus Rhizosphere | VLLAIVNAGWWLAPPSRRRDWRRQWRADILHEWEWLARHPRGAGDRAGLLLRAAGALRHAFWLRLHVRRLEMITQDIR |
Ga0132258_120497491 | 3300015371 | Arabidopsis Rhizosphere | MTQTRLLRVLLAIIDLAQWLAPPSRRRAWRRQWRADIWHESDWLDRGPDGVARAASLTRRTAGALRHALWLRLHVRKIEMLTQDLRY |
Ga0132258_124560001 | 3300015371 | Arabidopsis Rhizosphere | MAHQPDKHRSALLRVLLAIIDSTRWLAPASRRRAWRRQWRADIWHEWHWMSTRRGGIADRATLAARLTGAVRHAL |
Ga0132256_1034567122 | 3300015372 | Arabidopsis Rhizosphere | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWITAHQRGIGARAGVMRRAAGAFRHAFLLRMHVR |
Ga0132257_1013000483 | 3300015373 | Arabidopsis Rhizosphere | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIEQRESGIGARAGLVARVAGALRHAFWLRMHVRRIEMITQ |
Ga0184625_100314991 | 3300018081 | Groundwater Sediment | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIERRDSGIAARAGLVARVAGAFRHAFWLRMHVRRIEMITQDIR |
Ga0190273_122000901 | 3300018920 | Soil | MTTPNDELPTPSERRRPALLRMLLAIIDTGWWLAPPSRRRDWRRQWRADILHEWHWLTRHHRGVAGQATLFRRVAGALRH |
Ga0193723_10407453 | 3300019879 | Soil | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIERRDSGIAARAGLVTRVAGAFRHAFWLRMHVRRIEMITQDIRY |
Ga0193739_11418132 | 3300020003 | Soil | MTRGNREQRTPGLLRVLLAIIDTGWWLAPPSRRREWRRQWRADILHEWQWLTRHPRGVGDRAGLLRRVAGALRHAFW |
Ga0210408_108783312 | 3300021178 | Soil | MTGTTGRRGPLLRLLLAVIDTGWRLAPPSRRREWRRQWRADILHEWRWLTVRRRGVGGRVILLRRVAGALRHALWLRMHVRRLEMITQDIRYGW |
Ga0210384_110653721 | 3300021432 | Soil | MNQNPLLRLLLAIINTGRWLAPPSRRREWRRQWRADILHEWQWLTRHPRGVGDRASLFVRAAGALRHAFWLRVHVRSLEMMTQDIR |
Ga0210409_104415853 | 3300021559 | Soil | MTGTTGRRGPLLRLLLAVIDTGWRLAPPSRRREWRRQWRADILHEWRWLTVRRRGVGGRVILLRRVAGALR |
Ga0207645_106703172 | 3300025907 | Miscanthus Rhizosphere | VTNTNGDGRTTNNERRTPALLRVLLAIIDTGWWLAPPSRRRDWRQQWRADILHEWRWITRHPRGIGDRAGILRRVAGALRHAFWLRLHVRRLEMITQDIRYG |
Ga0207662_105592151 | 3300025918 | Switchgrass Rhizosphere | MTAKPRGLLGLLLAVVDAGRWLAPPSRRREWRRQWRADIWHQWHWMAGHDASLANRASLARRTAGAFRHAFWLRLHVRRVEMITQDLRYGWR |
Ga0207649_105543672 | 3300025920 | Corn Rhizosphere | MRRNPLLRLLLAIIDAGRWLAPASRRRDWRRQWRADILHEWQWLTRHPKGVGDRAGLFVRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPGFTFVAVLML |
Ga0207649_114343142 | 3300025920 | Corn Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRHAFW |
Ga0207701_108863343 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MRRNPLLGLLLAIIDAGRWLAPPSRRRDWRRQWRADILHEWQWLTRHPKGAGDRAGLFVRAGGALRH |
Ga0207706_103177401 | 3300025933 | Corn Rhizosphere | MRLLLRLLLAMIDLGARLAPRSRRRAWRRQWRADIVHEWQWLSRTDAGVIGRATLVRRAAGALRHAFWTSVARP |
Ga0207686_100157497 | 3300025934 | Miscanthus Rhizosphere | MSPRRGPLLRLLLAIVDAGWWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAGLFVPVAGALR |
Ga0207670_107241062 | 3300025936 | Switchgrass Rhizosphere | MLKFLLAVINAGRWLAPPSRRKAWRRQWRADVAHEWRWIEQRESGIGARAGLVARVAGALRHAFWLRMHVRRIEMITQDIRYG |
Ga0207704_105204271 | 3300025938 | Miscanthus Rhizosphere | LLAIVNAGQWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAALLVRAAGALRH |
Ga0207665_114731081 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPAF |
Ga0207651_118173262 | 3300025960 | Switchgrass Rhizosphere | MRLLLRLLLAMIDLGARLAPRSRRRAWRRQWRADIVHEWQWLSRTDAGVIGRATLVRRAAGALRHAFWLRGHVRRLEMISHDLRYGWRQMLRRPGV |
Ga0207712_112137331 | 3300025961 | Switchgrass Rhizosphere | MSEGRPTSHLLRLLLAIVDAGRWLAPPSRRRVWRRQWRADIVHQWQWLARHPRGVGAHAQLLARAASAP |
Ga0207712_113548942 | 3300025961 | Switchgrass Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLARHPKGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDIRY |
Ga0207712_120938202 | 3300025961 | Switchgrass Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRHAFWLRLHVRRL |
Ga0207640_109749741 | 3300025981 | Corn Rhizosphere | MQRNGLLRLLLAIIDAGRWLAPAARRRDWRRQWRADILHEWQWLTRHPESGDRAGLIVRTGGALRHAFWLRLHVRRLEMIAQDIRYGWRLMVRKPAFTIVAVLTLGLGI |
Ga0207703_104763963 | 3300026035 | Switchgrass Rhizosphere | LLAIVNAGQWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAALLVRAAGALRHALWLRLHV |
Ga0207703_110072022 | 3300026035 | Switchgrass Rhizosphere | MLKFLLAVINAGRWLAPPSRRKAWRRQWRADVAHEWRWIEQRESGIGARAGLVARVAGALRHAFWLRMHVRRIEMITQ |
Ga0207703_113003812 | 3300026035 | Switchgrass Rhizosphere | VRESPLLRVLLAIVNAGWWLAPPSRRRDWRRQWRADILHEWQWLARHPRGAGDRAGLLLRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMMRKP |
Ga0207703_122671722 | 3300026035 | Switchgrass Rhizosphere | MSPRRGPLLRLLLAIVDAGWWLAPPSRRRDWRRQWRADILHEWQWLTRHPRGVGDRAGLFVRVA |
Ga0207703_123966121 | 3300026035 | Switchgrass Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLARHPKGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPAFTI |
Ga0207676_109971921 | 3300026095 | Switchgrass Rhizosphere | MTRHPLLRLLLAIVDLGFWLAPPSRRRNWRRQWRADILHEWQWLTRHPKGAGDRAGLFVRATGALRHAFLLRLHVRRLEMITQ |
Ga0207698_116459262 | 3300026142 | Corn Rhizosphere | MSPVLRLLLAIVNAGRWLAPPTRRREWRRQWRADILHEWQWLDRHPRGHGDRAGLFVRTAGALRHAFWLRLHVRRLEMITQDIR |
Ga0207698_123755261 | 3300026142 | Corn Rhizosphere | MRLLLRLLLAMIDLGARLAPRSRRRAWRRQWRADIVHEWQWLSRTDAGVIGRATLVRRAAGALRHAFWLRGHVRRLEMISHDLRYGWRQMLRRPGVTVAAVVTLGLGI |
Ga0207981_10371331 | 3300027560 | Soil | MPKGPLLRLLLAIIDTGWWLAPPARRREWRRQWRADILHEWQRIVRQRDGSTRSGLVIRAAGALRHAFWLRLHVRRL |
Ga0209515_100604682 | 3300027835 | Groundwater | MKRSPLLRLLLAIVNVGWWLAPPSRRRDWRRQWRADILHEWQWIARHPQGSTRPASLIVRAAG |
Ga0268264_113136601 | 3300028381 | Switchgrass Rhizosphere | MRRNPLLRLLLAIIDAGRWLAPASRRRDWRRQWRADILHEWQWLTRHPKGVGDRAGLFVRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPAFTIV |
Ga0268264_119648361 | 3300028381 | Switchgrass Rhizosphere | VRESPLLRVLLAIVNAGWWLAPPSRRRDWRRQWRADILHEWQWLARHPRGAGDRAGLLLRAAGALRHAFWLRLHVRRLEMITQDIRYGWRLMMRKPAFTIVAVL |
Ga0268264_124834702 | 3300028381 | Switchgrass Rhizosphere | MSRPDGPLLRLLLAIIDAGRWLAPPARRRDWRRQWRADILHEWQWLARHPNGVGDRAGLFVRAGGALRHAFWLRLHVRRLEMITQDI |
Ga0307296_105363611 | 3300028819 | Soil | MTPRRGWLLRFVLALIDGGRWLAPASRRREWRRQWRADILHESQWLARHPHGLGARAGLVGRAAGA |
Ga0307296_107518161 | 3300028819 | Soil | MLKFLLAVINAGRWLAPPSRRKEWRRQWRADVAHEWRWIERRDSGIAARAGLVTRVAGAFRHAFWLRMHVRRIEMITQDIRYGWRLMVRKPAF |
Ga0310891_103126401 | 3300031913 | Soil | MSPRERRWLGVLLAIVDAGRWLAPPSRRREWRRQWRADIWHEWLWVAAHQPGLGARAGVMRRAAGAFRHALLLRMHVRRVEMITHDL |
Ga0310901_101358401 | 3300031940 | Soil | MSPAGRDGVLLRLLLRIVDAGRWLAPPSRRREWRRQWRADIWHESRWLARQHGVAARAGLAVTTLGALR |
Ga0310884_104869062 | 3300031944 | Soil | MPNRRRDAGLLLRLFLAIIDLVRWVAPVARRREWRRQWRADIWHEWQWLSGHRRGIGDRVALATRVTGAVRHAFWLRMHVRRLEMFTHD |
Ga0315281_104771443 | 3300032163 | Sediment | MKRSPLLRLLLAIVDAGWWLAPPSRRREWRRQWRADILHEWQWIARHPRGSARPAGLVVRAGGALRHAFWLRLHVRRLEMITQDIRYGWRLMVRKPVFTIVAVLTL |
Ga0315281_114485711 | 3300032163 | Sediment | MKRSPLLRLLLAIVDAGWWLAPPSRRRAWRRQWRADILHEWQWLARHPRGVGDRASLVVRAAGALRHAFWLRLHVRRLEM |
Ga0307470_112727042 | 3300032174 | Hardwood Forest Soil | MNRAPGPLLRMLLAVIDAGRWLAPPSRRRQWRRQWRADIWHESRWLDRDPRGVARSATLVRRTAGALHHAFW |
Ga0310889_101765491 | 3300032179 | Soil | MPNRRRDAGLLLRLFLAIIDLVRWVAPVARRREWRRQWRADIWHEWIWIRNHPHGITEPATLAARTFGALRHAFHLRLHMRDLEVITHDLRYGWRMMVRK |
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