NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084079

Metagenome / Metatranscriptome Family F084079

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084079
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 74 residues
Representative Sequence GIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Number of Associated Samples 86
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(20.536 % of family members)
Environment Ontology (ENVO) Unclassified
(54.464 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(40.179 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.31%    β-sheet: 27.84%    Coil/Unstructured: 61.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.34.20.1: YorP-liked2heqa12heq0.71
b.34.4.4: Electron transport accessory proteinsd3hhtb_3hht0.68
b.34.5.4: Translation proteins SH3-like domaind1nppa21npp0.67
b.34.11.2: Prokaryotic SH3-related domaind2akka12akk0.67
b.34.4.0: Electron transport accessory proteinsd6ly5e_6ly50.66


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF07275ArdA 2.68
PF13481AAA_25 0.89
PF00764Arginosuc_synth 0.89
PF13673Acetyltransf_10 0.89
PF13884Peptidase_S74 0.89
PF13384HTH_23 0.89
PF08774VRR_NUC 0.89
PF05866RusA 0.89
PF06356DUF1064 0.89
PF03237Terminase_6N 0.89
PF01464SLT 0.89
PF02092tRNA_synt_2f 0.89
PF11367DUF3168 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG4734Antirestriction protein ArdADefense mechanisms [V] 2.68
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.89
COG0751Glycyl-tRNA synthetase, beta subunitTranslation, ribosomal structure and biogenesis [J] 0.89
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003702|PicMicro_10000571Not Available38058Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine20.54%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean8.04%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater6.25%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic5.36%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater5.36%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.36%
Marine SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment3.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.57%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater2.68%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.68%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment2.68%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.68%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.79%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume1.79%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater1.79%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater1.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.79%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.89%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment0.89%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.89%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.89%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.89%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.89%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.89%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.89%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.89%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume0.89%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.89%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.89%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.89%
CompostEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Compost0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.89%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001605Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling BasinEngineeredOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300003702Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial AssemblyEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005783Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IXEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300007516Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01EnvironmentalOpen in IMG/M
3300007722Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)EnvironmentalOpen in IMG/M
3300007764Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MGEnvironmentalOpen in IMG/M
3300007769Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009537Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2WEnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012940Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021332Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022201Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21EnvironmentalOpen in IMG/M
3300022214Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025043Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025236Marine viral communities from the Deep Pacific Ocean - MSP-144 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025257Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026117Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)EnvironmentalOpen in IMG/M
3300026122Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026127Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026196Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300027872 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300027976Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028920Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6NEnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031693Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033991Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bactEnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034655Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Draft_1000158053300001605Hydrocarbon Resource EnvironmentsMSDTAYGYDGNGYNVNDRVEIHPATDLWMRGARYGTVTRMSLTTADRVRVELDAMPGRTFAGHADTFRRID*
KVRMV2_10119457643300002231Marine SedimentMAKTFTGFDLNTYRVGDRVEIHPATDLFMRGARYATVVGGRTSSKDRVHVEFDRMPGRTMSGSEDTFKWVADGEG*
JGI25131J35506_105149213300002511MarineLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV*
JGI25136J39404_103000023300002760MarineMTTITYTAAEAADRGIAPCHGYDGRGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPDDRVRVKIDRTGRTIRGSEDTFRRV*
PicViral_1000864293300003690Marine, Hydrothermal Vent PlumeMAKIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV*
PicViral_100317493300003690Marine, Hydrothermal Vent PlumeVAVTMRRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
PicMicro_10000571473300003702Marine, Hydrothermal Vent PlumeMAKIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVIGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV*
Ga0055584_10103908833300004097Pelagic MarineMNTRYFTGYNGKQYKVGDRVEIHPGTDLWMQGARYGVVIGSSITPNDRVKVKMDKLPGRKFSGS
Ga0066388_10130633233300005332Tropical Forest SoilMTGYDGNGYEVGDRVELHPASDLWMRGARYGVVTGRSTTVRDRVRVRFDLIPNRVFSGAEDFFRRVEA*
Ga0078430_10734333300005783SedimentMATRQTTFTGFDGNGYCVGDRVQIHPATDLWMRGARYGVVVGSSLTSSDRVKVELDRIPGRTFAGSEDTFKGV*
Ga0098044_119476523300006754MarineVATGNIFEDATLKHATGYDGNTYTIGDRVEIHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV*
Ga0079217_1000791333300006876Agricultural SoilMNTAYGFDGSGYNVGDRVEIHPGTDLWMRGARYGTVIGISFTPADRVRVEMDKLPGTRVCGHEDTFRRVSA*
Ga0066376_1023594923300006900MarineMTKIIYTPGEAADRGISPCHGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV*
Ga0105050_1028341823300007516FreshwaterMADLIGYDGNGYGIGDRVELHPGTDLWMRGARYGTVTGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID*
Ga0105051_1039569923300007722FreshwaterMADLIGYDGSGYGIGDRVELHPGTDLWMRGARYGTVIGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID*
Ga0102950_100441553300007764SoilMSHETVLIGYDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR*
Ga0102952_106498833300007769SoilYDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR*
Ga0102952_109980213300007769SoilMPKTYDTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG*
Ga0114898_100682343300008216Deep OceanMTGYDGNSYQIGDRVELHPGTDLWIMGARFGTVIGSSITLNDRVYVKLDKLNGKFAGAEDTFKAI*
Ga0114898_101438253300008216Deep OceanMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
Ga0114905_101191853300008219Deep OceanVAVTMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI*
Ga0114918_1072569723300009149Deep SubsurfaceMKDLIGYDGNGYRKGDRVELHPGTDLWMRGARFGIVIGTRPTPDDRVIVELDRIPGRKFSGSADTFRAVL*
Ga0114996_1008014623300009173MarineMTTENIFEDSTLRKATGYDGTEYTIGDRVEIHPETDLWIRVSRYGVVVGMSLTSKDRVHVEMDKFPNRKQPFAGSEDTFRKI*
Ga0114996_1016083033300009173MarineMIKITYTPAEAADRGISPCHGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGVRLTPNDRVIVKIDRTGRKISGSEDTFRRV*
Ga0114908_116597013300009418Deep OceanMTKVRYTAAEASDRGIAPCHGYDGHGYTVGDRVELHPGTDLWMKGARYGDVVGLSLTPNDRVRVKIDRTGHTIHGSEETFRRV*
Ga0118657_1262351323300009506Mangrove SedimentMDALIGYDGNGYAVGDRVELHPGCDLWMRGARYGTVIGTSITKNDRVKVTLDKIPARKFSCAADMLRRVD*
Ga0123573_1018138113300009509Mangrove SedimentMDATATGYDGNGYGIGDRVELHPGTDLWMRGARYGKVIGLSLTPLDRVRVELDAIPGRVFSGSQETFRYVFQD*
Ga0129283_1001240323300009537Beach Aquifer PorewaterMATGYDGTEYNVGDRVELHPGTDLWMRGARYGTVVGMSLTPNDRVKVEVDKLPGRKFSGSEDTFRLVS*
Ga0129283_1047452623300009537Beach Aquifer PorewaterMSATVYGYDGNGYTVGDRVELHPGTDLWMRGARYGVVVGMRPTPKDRVHVKLDKLPSRTFSGSADTFRPIA*
Ga0105214_10354413300009595Marine OceanicAADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV*
Ga0105173_102462913300009622Marine OceanicMTKIIYTPDEAADRGISPCHGYDGNGYTIGDSVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDR
Ga0105173_104561333300009622Marine OceanicSTPEAQPMILTSSEAAQRNISPCHGYDTNGYTIGDRVEIHPGTDLWMRGARYGTVVGLSLTPKDRVHVQMDKAGKVSGSEDTFRSLA*
Ga0105173_104954323300009622Marine OceanicMNKIAYTAAEAADRGIAPCHGYDGIGYTIGDRVELHPRTDLWMGGARYGEVVGLSLTPDDRVRVRVDRTVLTIRGSEDTFRRVC*
Ga0105173_109246513300009622Marine OceanicMILTSSEAAERNISPCHGYDTNGYTIGDRVEIHPGTDLWMRGARYGTVVGLSLTPKDRVHVQMDKAGKVSGSEDTFRSLA
Ga0105252_10000172433300009678SoilMKTETVYGFDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE*
Ga0114999_1058675123300009786MarineAMTGYDGNGYGVGDRVEIHPSTDLWMRGARFGVVVGTSLTPADRVRVKLDKLPRRTFAGSADTFRAI*
Ga0126380_1060449133300010043Tropical Forest SoilMTGYDGNGYDVGDRVELHPGSDLWMRGAKFGTVVGSSLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0126382_1131250823300010047Tropical Forest SoilMTGYDGNGYDVGDRVELHPGCDLWMRGAKFGTVVGASLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0098061_128584223300010151MarineVATGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFKKI*
Ga0126370_10000031113300010358Tropical Forest SoilMTGYDGNGYDVGDRVELHPGSDLWMRGAKFGTVVGASLTHYDRVRVRLDRIPGKVYCGPADRFRRIPDGGAA*
Ga0126381_10182992643300010376Tropical Forest SoilMAFYGYDGNGYEIGDRVELHPACDLWMRGCRYGKVVGSSVTVDDRVHVVLDRKAGVYGGREDDFRRVD*
Ga0133547_1187205623300010883MarineMTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI*
Ga0137430_105595643300012041SoilFDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE*
Ga0164243_1006496213300012940CompostMAQQQTVIGYDGNGYSVNDRVELHPGTDLWMQGARYGTVKGLSLTPNDRVKVELDKMPGKLFAGSADTFRRI*
Ga0181420_119961613300017757SeawaterMTKIIYTPSEAADRGISPCEGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKVSGSEDTFRRA
Ga0181357_113980033300017777Freshwater LakeMPTETVYGYDGLGYTVGDRVEIHPGTDLWMRGARYGMVVGMSITSSDRVRVVLDRLPARKYSGTADRFRRIE
Ga0211576_1034493823300020438MarineMETFTGYDGSQYKIGDRVEISPGTDLWIKGAKYGVVIGSSITPDDRVKVIMDKLPSKKFSGSEDTFAAI
Ga0210339_113062913300021332EstuarineMKGYDGIEYQVGDRVELHPGCDLWMQGARYGTVVGTSLTSDDRVRVELDRIPGRKFSGPEDRFRKV
Ga0181353_101529033300022179Freshwater LakeMTHDLIGYDGNGYSIGARVELHPGLDWWMRGARYGTVVGTRSTTDDRVIVTLDAAGDRKFSAPADRFRAI
Ga0224503_1018215213300022201SedimentMDRLRRKEGAIMNVKLIGYDGLPYALGDRVELHPGCDLWMQGARCGTVVGTSLTRADRVRVELDKTPGRTFSGPADRFRKV
Ga0224505_1003711833300022214SedimentMRTFTGYDGNGYNTGDRVELHPGTDLWMRGARYGTVIGSSITPNDRVKVELDAFPGRKFSGSEDTFRRIPE
Ga0224512_1016184343300022226SedimentMVTGYDGKAYVVGDRVEIHPGTDLWMMGARFGVVVGTSLTPIDRVKVRLDKMPKRVFSGPEDRFRGSRG
(restricted) Ga0255048_10006172103300024518SeawaterMARTMTGYDGNGYEIGDRVELHPGTGLWMQGARYGVVTSTRSTPVDRVHVRLDKLPKRLFSGSEDLFKRID
(restricted) Ga0255048_1008205723300024518SeawaterMTGYDGNGYGVGDRVELHPGCDLWARGARFGVVVGVSLTTRDRVKVKLDKMPSRLFSGSEDTFRGVI
(restricted) Ga0255048_1016058613300024518SeawaterMTTFTGFDGNGYTVGDRIEIHPGTDLWIRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
(restricted) Ga0255048_1053141913300024518SeawaterMTGYDGNSYAVGDRVELHPANDLWTRGARFGVVVRTSLTPKDRVHVKLDKLPRTTFATTEDNLRGIDQ
(restricted) Ga0255047_1053559933300024520SeawaterMTTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
Ga0207907_12265023300025043MarineMTKIIYTPGEAADRGISPCEGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKISGSEDTFRRV
Ga0207906_102371623300025052MarineMTKIIYTPSEAADRGISPCEGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVRIDRTGRKVSGSEDTFRRV
Ga0209644_100746233300025125MarineMAKITYTAAEAADRGIAPCHGYDGNGYTIGDRVELHPGTDLWMRGALYGDVVGLSLTPNDRVRVKIDRTGRTIRGSEDTFRRV
Ga0209644_106679213300025125MarineVATGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV
Ga0209644_107131413300025125MarineMTKITYTATEAADRGITPCHGYDGHGYTIGDRVELHPGTDLWMMGARYGDVVGLSLTPNDRVRVKIDRTGQTICGSEETFRRV
Ga0207884_102709723300025236Deep OceanMTKVRYTAHEASNKGISPCYGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGLSITPNDRVRVKIDRTGRTISGSEDTFRRV
Ga0208182_1002018123300025251Deep OceanVAVTMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0207899_103124133300025257Deep OceanMTEIIYTPSEAADRGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGR
Ga0207899_104626323300025257Deep OceanMARIIYTPDEAADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0208183_101325313300025274Deep OceanMTGYDGNSYQIGDRVELHPGTDLWIMGARFGTVIGSSITLNDRVYVKLDKLNGKFAGAEDTFKAI
Ga0209757_1001807613300025873MarineVTTGNIFEDATLKQATGYDGNTYTIGDRVELHPATDLWMMGARFGEVVGTSLTPNDRVRVKLDAFPNRKTPFAGSADTFRKV
Ga0209757_1003471423300025873MarineMTKIIYTPSEAADRGVSPCQGYDGYGYTIGNRVVSHPGTDLWMRGARYGEVVGLRLTPNDRVIVRIDRTGRKVSGSEDTFRRV
Ga0209757_1005392513300025873MarineMTKITYTATEAADRGITPCHGYDGHGYTIGDRVELHPGTDLWMMGARYGDVVGLSLTPNDRVRVKIDRTGHTICGSEETFRRV
Ga0209757_1006857033300025873MarineMAKITYTAAEAADRGIAPCHGYDGNGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPNDRVRVKIDRTGRTIRGSEDTFRRV
Ga0209757_1014181513300025873MarineEAADRGIAPCHGYDGRGYTIGDRVELHPGTDLWMRGARYGDVVGLSLTPDDRVRVKIDRTGRTIRGSEDTFRRV
Ga0208317_100454233300026117Marine OceanicGIAPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGNVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0209926_100206393300026122SoilMSHETVLIGYDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR
Ga0209956_110091213300026127SoilMPKTYDTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG
Ga0209919_110873413300026196SoilTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG
Ga0208454_1000376253300027573SoilMKTETVYGFDGNGYGIGDRVELHPCTDLWMRGARYGVVVGMSLTPNDRVKVELDARPGQVFAGSADTFRALQE
Ga0209818_100885723300027637Agricultural SoilMNTAYGFDGSGYNVGDRVEIHPGTDLWMRGARYGTVIGISFTPADRVRVEMDKLPGTRVCGHEDTFRRVSA
Ga0209501_1004059953300027844MarineMTTENIFEDSTLRKATGYDGTEYTIGDRVEIHPETDLWIRVSRYGVVVGMSLTSKDRVHVEMDKFPNRKQPFAGSEDTFRKI
(restricted) Ga0255052_1009156913300027865SeawaterMSTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGSSLTPNDRVHVILDKLPKRKFSGSEDTFQRID
(restricted) Ga0255058_1020576823300027872SeawaterMTTVYGYDGNGYATGDRVELHPGTDLWMRGARFGEVIGISLTPADRVRVTLDKRPGRIFASYAESFRRIG
(restricted) Ga0255058_1027241013300027872SeawaterMTTLYGFDGNGYTVGDRVEIHPGTDYWMRGARFGTVVRTSLTPKDRVHVKLDKISQVVAGTADTFQRI
(restricted) Ga0255055_1057338813300027881SeawaterMTTFTGFDGNGYTIGDRIEIHPGTDLWMRGARFGVVIGASLTPNDRVHVILDNLPKRKFSCSEDTFQRID
Ga0209702_1017718123300027976FreshwaterMADLIGYDGNGYGIGDRVELHPGTDLWMRGARYGTVTGSSLTSADRVRVQLDAMPGRKFAGHADTFRRID
Ga0256381_104510213300028018SeawaterMTKVRYTAAEASDRGIAPCHGYDGHGYTVGDRVELHPGTDLWMRGARYGEVVGLSITLPSDRIGRNDRVRVKIDRTGHTICGSEETFRRV
Ga0272441_1006030193300028920Marine SedimentMERTVYGYDGNGYWVGDRVELHPGTDLWMRGARYGQVVGIVPTPADRVRVVLDKIPGRTFAGSADTFRAI
Ga0272441_1019458213300028920Marine SedimentMETTVYGYDGSGYGVGDRVELHPGTDLWMRGARYGEVVGISATPADRVRVKLDKLPSRVFAGHAETFRRVD
Ga0272441_1020658523300028920Marine SedimentMERTVYGYDGNGYRVGDRVELHPGTDLWMRGARYGQVVGVVPTPADRVRVVLDKIPGRTFAGSADTFRAI
Ga0272441_1036086713300028920Marine SedimentMKTHTGYDGNGYGIGDRVEIHPGTDLWIRGARYGTVVGSSLTPLDRVKVEMDKLPGRIFAATEDTFKAV
Ga0307380_1109348313300031539SoilMSTLYGYDGNGYQVGDRVELHPGTDLWMRGARYGLVVGTSLTPNDRVKVRLDKLPKRLFSGSQDTFAKI
Ga0302132_1004443153300031605MarineMIKITYTPAEAADRGISPCHGYDGKGYTVGDRVELHPGTDLWMRGARYGDVVGVRLTPNDRVIVKIDRTGRKISGSEDTFRRV
Ga0302123_1017366933300031623MarineMTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI
Ga0307377_1033967123300031673SoilMTGYDGNGYDVGDRVELHPGTDLWMRGARYGVVVGRSLTPKDRVRVVLDKLPNRTFGGSENTFRYAG
Ga0307377_1034026243300031673SoilMTGYDGNGYDVGDRVELHPGTDLWMRGARYGTVVGQVPTPKDRVRVELDKFPGRRFSGSEDTFRYVG
Ga0302139_1028783013300031693MarineGDAMTGYDGNGYGVGDRVEIHPSTDLWMRGARYGVVIGSSLTPKDRVRVKLDKLPRRTFAGSADTFRAI
Ga0318552_1041281343300031782SoilGYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0310123_1023888933300031802MarineMTKIIYTPDEAADRGISPCHGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0306921_1043292053300031912SoilMTGYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0315278_1046922513300031997SedimentMTTFYGYDGNGYNIGDRVELHPGTDLWMRGARYGRVVGSSSTPSDRVHVKLDRLARKLAGPESNFRRIA
Ga0310344_1024285923300032006SeawaterMPNNYATGYDGNTYTIGDRVELHPGTDLWMRGARFGEVIAMNSPHNDRVRVKLDAFPNRKAPFSGPANRFKFIGQS
Ga0306924_1068031153300032076SoilRMTGYDGNGYNVGDRIELHPGCDLWMRGARYGTVVARIDTPRARVRVRLDARPGRLYSGQEDDFRRID
Ga0316187_1065405833300032231Worm BurrowVGDRVEIHPGTDQWMMGARYGTVVGMSITPNGRIKVELDKIPGRKFAGSADTFRAV
Ga0310342_10183117023300032820SeawaterMFKGYDGNSYEVGDRVELHPATDLWMRGARFGVVVGSSLTPKDRVRVRLDKLPKTTFGASEDTFRAI
Ga0310342_10308219523300032820SeawaterNNYATGYDGNTYTIGDRVELHPGTDLWMMGARFGEVIGMSLTHNDRVRVKLDAFPNRKTPFSGPANRFKFIGQS
Ga0334722_1070757023300033233SedimentVPLLEECDAMSDVYGYDGSGYSVGDRVELHPATDLWMRGARYATVVRISLTPNDRVTVELDQPYLRGRRFSGSADTFRVVPTR
Ga0334965_0327652_86_3013300033991SedimentMTMNKFIGYDGKLYHVGDRVELHPGCDLWMQGAKYGVVVGQSQTKEDRVKVILDKLPKRKFSCPEDRLRKI
Ga0326755_024134_125_3733300034628Filtered SeawaterVATGNIFEDATLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0326756_005846_838_10653300034629Filtered SeawaterMRRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI
Ga0326741_030208_1_2373300034654Filtered SeawaterYTPDEAADRGISPCEGYDGNGYTIGDSVELHPGTDLWMRGARYGDVVGMRLTPNDRVIVKIDRTGRKVSGSEDTFRRV
Ga0326741_054485_196_4173300034654Filtered SeawaterMATVTGYDGYGYTVGDRVEIHPGTDLWMQGARYGTVVRMSPTPADRVHVKLDKLPDHTFAGHEDTFRLANLFG
Ga0326741_054975_107_3583300034654Filtered SeawaterMTKVRYTAHEASNTGISPCYGYDGNGYTVGDRVELHPGTDLWMRGARYGDVVGLSITPNDRVRVKIDRTGRTISGSEDTFRRV
Ga0326746_005172_61_2883300034655Filtered SeawaterMQRYLKLATGYDGSAYTIGDRVELHPGTDLWMMGARYGEVIGMSLTPNDRVRVKLDAFPDRKTPFAGSADTFRKI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.