NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084238

Metagenome Family F084238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084238
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 47 residues
Representative Sequence MAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY
Number of Associated Samples 85
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 94.64 %
% of genes from short scaffolds (< 2000 bps) 84.82 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (77.679 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine
(29.464 % of family members)
Environment Ontology (ENVO) Unclassified
(34.821 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(47.321 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 69.57%    β-sheet: 0.00%    Coil/Unstructured: 30.43%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF13589HATPase_c_3 5.36
PF10979DUF2786 2.68
PF01381HTH_3 1.79
PF01272GreA_GreB 1.79
PF13391HNH_2 0.89
PF04851ResIII 0.89
PF01351RNase_HII 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 1.79
COG0164Ribonuclease HIIReplication, recombination and repair [L] 0.89
COG1039Ribonuclease HIIIReplication, recombination and repair [L] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.68 %
All OrganismsrootAll Organisms22.32 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10149588Not Available579Open in IMG/M
3300001282|B570J14230_10215236Not Available525Open in IMG/M
3300001838|RCM33_1039302Not Available535Open in IMG/M
3300001968|GOS2236_1009870All Organisms → Viruses → Predicted Viral1624Open in IMG/M
3300002835|B570J40625_101617204Not Available529Open in IMG/M
3300003393|JGI25909J50240_1028173All Organisms → Viruses → Predicted Viral1247Open in IMG/M
3300004096|Ga0066177_10232717Not Available765Open in IMG/M
3300005527|Ga0068876_10553886Not Available627Open in IMG/M
3300005580|Ga0049083_10023478All Organisms → Viruses → Predicted Viral2220Open in IMG/M
3300005581|Ga0049081_10335188Not Available515Open in IMG/M
3300005582|Ga0049080_10005432Not Available4417Open in IMG/M
3300005582|Ga0049080_10075633Not Available1153Open in IMG/M
3300005582|Ga0049080_10188627Not Available684Open in IMG/M
3300005662|Ga0078894_10237204All Organisms → Viruses → Predicted Viral1653Open in IMG/M
3300005662|Ga0078894_10363415Not Available1310Open in IMG/M
3300005662|Ga0078894_11669768Not Available523Open in IMG/M
3300006484|Ga0070744_10019462Not Available2017Open in IMG/M
3300007171|Ga0102977_1000674All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales300536Open in IMG/M
3300007544|Ga0102861_1181453Not Available576Open in IMG/M
3300007550|Ga0102880_1198933Not Available523Open in IMG/M
3300007559|Ga0102828_1004602Not Available2647Open in IMG/M
3300007559|Ga0102828_1012125All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300007603|Ga0102921_1357567Not Available519Open in IMG/M
3300007618|Ga0102896_1186829Not Available654Open in IMG/M
3300007620|Ga0102871_1062334Not Available1089Open in IMG/M
3300007630|Ga0102903_1199385Not Available544Open in IMG/M
3300007630|Ga0102903_1205045Not Available535Open in IMG/M
3300007636|Ga0102856_1020260Not Available976Open in IMG/M
3300007644|Ga0102902_1189046Not Available608Open in IMG/M
3300007647|Ga0102855_1023035Not Available1717Open in IMG/M
3300007647|Ga0102855_1128398Not Available678Open in IMG/M
3300007647|Ga0102855_1155180Not Available612Open in IMG/M
3300007670|Ga0102862_1044942Not Available1066Open in IMG/M
3300007708|Ga0102859_1045775All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300007708|Ga0102859_1046248All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300007954|Ga0105739_1071816Not Available771Open in IMG/M
3300008113|Ga0114346_1157482Not Available961Open in IMG/M
3300008261|Ga0114336_1270829Not Available662Open in IMG/M
3300008450|Ga0114880_1083850Not Available1265Open in IMG/M
3300008996|Ga0102831_1291681Not Available539Open in IMG/M
3300008999|Ga0102816_1093919All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300009009|Ga0105105_10495831Not Available697Open in IMG/M
3300009026|Ga0102829_1016212Not Available2093Open in IMG/M
3300009026|Ga0102829_1211910Not Available631Open in IMG/M
3300009026|Ga0102829_1256930Not Available575Open in IMG/M
3300009049|Ga0102911_1172231Not Available612Open in IMG/M
3300009056|Ga0102860_1038889Not Available1267Open in IMG/M
3300009059|Ga0102830_1170137Not Available639Open in IMG/M
3300009419|Ga0114982_1028886All Organisms → Viruses → Predicted Viral1806Open in IMG/M
3300009419|Ga0114982_1036845Not Available1573Open in IMG/M
3300009419|Ga0114982_1078171Not Available1028Open in IMG/M
3300009419|Ga0114982_1228525Not Available578Open in IMG/M
3300010312|Ga0102883_1206889Not Available554Open in IMG/M
3300010885|Ga0133913_10526775All Organisms → Viruses → Predicted Viral3111Open in IMG/M
3300010885|Ga0133913_10682435Not Available2689Open in IMG/M
3300010885|Ga0133913_13300916Not Available1062Open in IMG/M
3300011268|Ga0151620_1247984Not Available529Open in IMG/M
3300012663|Ga0157203_1007796Not Available1885Open in IMG/M
3300013005|Ga0164292_10073755All Organisms → Viruses → Predicted Viral2623Open in IMG/M
3300013372|Ga0177922_10431691Not Available2856Open in IMG/M
3300017766|Ga0181343_1070158Not Available1013Open in IMG/M
3300017766|Ga0181343_1126257Not Available718Open in IMG/M
3300019784|Ga0181359_1041135All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium1790Open in IMG/M
3300020159|Ga0211734_10233842All Organisms → Viruses → Predicted Viral1383Open in IMG/M
3300020172|Ga0211729_10538357Not Available592Open in IMG/M
3300020524|Ga0208858_1018417Not Available1089Open in IMG/M
3300020572|Ga0207909_1052353Not Available633Open in IMG/M
3300021141|Ga0214163_1004442All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium5263Open in IMG/M
3300021141|Ga0214163_1013063Not Available2683Open in IMG/M
3300021141|Ga0214163_1125506Not Available573Open in IMG/M
3300021952|Ga0213921_1026790Not Available938Open in IMG/M
3300021961|Ga0222714_10626688Not Available534Open in IMG/M
3300021962|Ga0222713_10028941All Organisms → Viruses → Predicted Viral4501Open in IMG/M
3300021962|Ga0222713_10454728Not Available775Open in IMG/M
3300021962|Ga0222713_10588148Not Available651Open in IMG/M
3300021963|Ga0222712_10052682All Organisms → Viruses → Predicted Viral3028Open in IMG/M
3300023184|Ga0214919_10061579All Organisms → Viruses → Predicted Viral3471Open in IMG/M
3300024343|Ga0244777_10882960Not Available523Open in IMG/M
3300024346|Ga0244775_10070370All Organisms → Viruses → Predicted Viral3000Open in IMG/M
3300024346|Ga0244775_11328502Not Available555Open in IMG/M
3300024507|Ga0255176_1038560Not Available907Open in IMG/M
3300027149|Ga0255108_1083987Not Available567Open in IMG/M
3300027150|Ga0255112_1089976Not Available570Open in IMG/M
3300027186|Ga0208797_1002012All Organisms → Viruses → Predicted Viral3349Open in IMG/M
3300027189|Ga0208675_1028402Not Available679Open in IMG/M
3300027205|Ga0208926_1056864Not Available576Open in IMG/M
3300027212|Ga0208554_1071732Not Available535Open in IMG/M
3300027286|Ga0255129_1065613Not Available540Open in IMG/M
3300027299|Ga0255124_1009831Not Available1965Open in IMG/M
3300027299|Ga0255124_1090835Not Available504Open in IMG/M
3300027301|Ga0255127_1069751Not Available561Open in IMG/M
3300027320|Ga0208923_1017556All Organisms → Viruses → Predicted Viral1260Open in IMG/M
3300027320|Ga0208923_1100844Not Available510Open in IMG/M
3300027593|Ga0255118_1075968Not Available550Open in IMG/M
3300027593|Ga0255118_1083847Not Available517Open in IMG/M
3300027595|Ga0255122_1075226Not Available562Open in IMG/M
3300027600|Ga0255117_1037177All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300027600|Ga0255117_1098045Not Available554Open in IMG/M
3300027608|Ga0208974_1053784Not Available1151Open in IMG/M
3300027608|Ga0208974_1066703All Organisms → Viruses → Predicted Viral1004Open in IMG/M
3300027627|Ga0208942_1203399Not Available507Open in IMG/M
3300027710|Ga0209599_10022517All Organisms → Viruses → Predicted Viral1762Open in IMG/M
3300027746|Ga0209597_1326262Not Available581Open in IMG/M
3300027808|Ga0209354_10362931Not Available568Open in IMG/M
3300031784|Ga0315899_11435184Not Available582Open in IMG/M
3300032092|Ga0315905_10446511All Organisms → Viruses → Predicted Viral1204Open in IMG/M
3300033557|Ga0316617_101818627Not Available622Open in IMG/M
3300034018|Ga0334985_0628681Not Available593Open in IMG/M
3300034102|Ga0335029_0763096Not Available515Open in IMG/M
3300034107|Ga0335037_0547350Not Available615Open in IMG/M
3300034108|Ga0335050_0245868Not Available891Open in IMG/M
3300034283|Ga0335007_0243413Not Available1217Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine29.46%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater10.71%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.93%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic7.14%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater6.25%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.25%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.46%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface4.46%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.68%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.68%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.79%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.79%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.89%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.89%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.89%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.89%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.89%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.89%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300001282Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnionEnvironmentalOpen in IMG/M
3300001838Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2aEnvironmentalOpen in IMG/M
3300001968Marine microbial communities from Lake Gatun, Panama - GS020EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300007171Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300007550Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007603Estuarine microbial communities from the Columbia River estuary - metaG 1568-02EnvironmentalOpen in IMG/M
3300007618Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02EnvironmentalOpen in IMG/M
3300007620Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02EnvironmentalOpen in IMG/M
3300007630Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02EnvironmentalOpen in IMG/M
3300007636Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3EnvironmentalOpen in IMG/M
3300007644Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02EnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007670Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009059Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703EnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010312Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020524Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020572Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021141Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnionEnvironmentalOpen in IMG/M
3300021952Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MGEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024507Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8dEnvironmentalOpen in IMG/M
3300027149Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8hEnvironmentalOpen in IMG/M
3300027150Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8hEnvironmentalOpen in IMG/M
3300027186Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)EnvironmentalOpen in IMG/M
3300027189Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 (SPAdes)EnvironmentalOpen in IMG/M
3300027205Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027212Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027286Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027299Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300027301Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8dEnvironmentalOpen in IMG/M
3300027320Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)EnvironmentalOpen in IMG/M
3300027593Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8hEnvironmentalOpen in IMG/M
3300027595Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027600Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027627Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027746Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034108Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1014958823300000756Freshwater And SedimentWRDSYIENYDIEEQEFKDLVKMFRLHADAGHYLVANY*
B570J14230_1021523623300001282FreshwaterRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
RCM33_103930213300001838Marine PlanktonTEWQDSYVENYDIEEQECKDLVKMFRLHADAGHYLVAFY*
GOS2236_100987033300001968MarineSIHYREIPNEIVKKMADDLEATEWRDSYIENYDIEEKEFKDLVRMFRLHADAGHYLLAWY
B570J40625_10161720423300002835FreshwaterNETVKQMADDLEATEWRDSYVENYDIEEEEFKDLVKMFRLHADAGHYLLAWY*
JGI25909J50240_102817313300003393Freshwater LakeMADDLGATEWRDSYIQNYDIQEEEFRDLVRMFRLHADAGHYLLAWY*
Ga0066177_1023271713300004096Freshwater LakeETVKQMAIDLGETEWRDSYIQNYDIEKQEFEDLVRMFRLHADAGHYLLAWY*
Ga0068876_1055388633300005527Freshwater LakeKQMAIDLEETEWRDSYIAHYDIEEDEFKDLVKMFKLHADAGHYLVAWY*
Ga0049083_1002347813300005580Freshwater LenticKQMADDLGATEWRDSYIQNYDIQEEEFRDLVRMFRLHADAGHYLLAWY*
Ga0049081_1033518813300005581Freshwater LenticEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLLAWY*
Ga0049080_1000543213300005582Freshwater LenticDSYIQNYDIEEEEFKDLVKMFRLHADAGHYLLAWY*
Ga0049080_1007563333300005582Freshwater LenticRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLLAWY*
Ga0049080_1018862723300005582Freshwater LenticEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY*
Ga0078894_1023720443300005662Freshwater LakeTEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY*
Ga0078894_1036341543300005662Freshwater LakeKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY*
Ga0078894_1166976813300005662Freshwater LakeIKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY*
Ga0070744_1001946253300006484EstuarineATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF*
Ga0102977_10006742843300007171Freshwater LakeLEATEWRDSYIENYDIEEEEFKDLVRMFKLHAEAGHYLVAWY*
Ga0102861_118145313300007544EstuarineNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102880_119893313300007550EstuarineYTNETNVISNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102828_100460273300007559EstuarineVKQMADDLEATEWRDSYIENYDIEEHEFKDLVRMFRLHADAGHYLLAWF*
Ga0102828_101212513300007559EstuarineMADDLEATEWRDSYIENYDIVEEEFRDLVKMFRLHADAGHYLVSSW*
Ga0102921_135756733300007603EstuarineNEISNEIIRDMADGMEATEFKPEYIAYYDIEEEEFKDLVKMFRLHADAGHFLVSSY*
Ga0102896_118682913300007618EstuarineEWRDSYIQNYDIEEKEFKDLVRMFRLHADAGHYLVAWY*
Ga0102871_106233413300007620EstuarineNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102903_119938523300007630EstuarineTEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY*
Ga0102903_120504513300007630EstuarinePETFETPKETVKQMAIDLEETEWRDSYIQNYDIEEEEFKDLVKMFRLHADAGHYLLAWY*
Ga0102856_102026033300007636EstuarineDSFIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY*
Ga0102902_118904613300007644EstuarineTEWRDSYIENYDIVEEEFKDLVKMFRLHADAGHYLESSW*
Ga0102855_102303533300007647EstuarineTVKQMADDLEATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWY*
Ga0102855_112839813300007647EstuarinePETFETPNETVKQMAIDLEETEWRDSYIQNYDIEEHEFKDLVRMFRLHADAGHYLVAWY*
Ga0102855_115518023300007647EstuarineDLEATEWRDSYIQNYDIEEEEFRDLVKMFRLHADAGHYLVSSW*
Ga0102862_104494213300007670EstuarineTNVISNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102859_104577513300007708EstuarineTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEEEFKDLVKMFRLHADAGHYLLAWY
Ga0102859_104624833300007708EstuarineEWRDSYVENYDIEEQEFKDLVRMFRLHADAGHYLLAWF*
Ga0105739_107181633300007954Estuary WaterESNEIPNEIIRDMADSLEATEWRDSYIQEYDIEEQEFKDLARMFRLHADAGHYLVADY*
Ga0114346_115748213300008113Freshwater, PlanktonDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY*
Ga0114336_127082923300008261Freshwater, PlanktonATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY*
Ga0114880_108385043300008450Freshwater LakeMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY*
Ga0102831_129168113300008996EstuarineETFEISSETVKQMAIDLGETEWRDSYIQNYDIEKQEFEDLVRMFRLHADAGHYLLAWY*
Ga0102816_109391973300008999EstuarineRETNEISNETVKKMADDLEATEWRDSYIENYDIVEEEFKDLVKMFRLHADAGHYLESSW*
Ga0105105_1049583113300009009Freshwater SedimentETEWRDSYIQNYDIEEQEFKDLVKMFKLHADAGHYLVAWY*
Ga0102829_101621253300009026EstuarineDPETFEVPNETVKQMADDLQATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0102829_121191023300009026EstuarineEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWY*
Ga0102829_125693023300009026EstuarineFETPNETVKQMADDLEATEWRDSYIENYDIEEHEFKDLVRMFRLHADAGHYLLAWF*
Ga0102911_117223123300009049EstuarineSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102860_103888913300009056EstuarineTNETNVISNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0102830_117013713300009059EstuarineKQMADDLDATEWRDSYIQNYDIEEHEFKDLVKMFRLHADAGHYLLAWY*
Ga0114982_102888613300009419Deep SubsurfacePEFIAYYDIEEEEFKDFVKMFRLHADAGHFLVSSY*
Ga0114982_103684513300009419Deep SubsurfaceNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY*
Ga0114982_107817133300009419Deep SubsurfaceGYTNETNDISNEIIREMADGLEATEFKPEFIAYYNIEEEEFKDLVRMFRVHADAGHFLVSSW*
Ga0114982_122852523300009419Deep SubsurfaceKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0102883_120688943300010312EstuarineDDLETTEWRESYIVNYDIEEQEFKDLVRMFRLHADAGHYLESSW*
Ga0133913_1052677513300010885Freshwater LakeSYIINYDIEEQEFKDLVRMFRLHADAGHYLESSW*
Ga0133913_1068243513300010885Freshwater LakeLEETEWRDSYIQNYDIEEQEFKDLARMFRLHADAGHYLVASY*
Ga0133913_1330091613300010885Freshwater LakeTTEWRESYIINYDIEEQEFKDLVRMFRLHADAGHYLESSW*
Ga0151620_124798423300011268FreshwaterMAIDLGETEWRDSYIQNYDIEKQEFEDLVRMFRLHADAGHYLLAWY*
Ga0157203_100779653300012663FreshwaterDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0164292_1007375513300013005FreshwaterWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY*
Ga0177922_1043169113300013372FreshwaterGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLLAWY*
Ga0181343_107015813300017766Freshwater LakeGYTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0181343_112625713300017766Freshwater LakeWRDSYIGNYDIEEEEFKDLVKMFRLHSDAGHYLLAWY
Ga0181359_104113553300019784Freshwater LakeSETVKQMADDLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0211734_1023384243300020159FreshwaterEATEWRDSYIENYDIEEEEFKDLVKMFRLHADAGHYLVSSW
Ga0211729_1053835713300020172FreshwaterNETVKQMADDLEATEWRDSYVENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0208858_101841733300020524FreshwaterYTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAW
Ga0207909_105235323300020572FreshwaterDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0214163_100444213300021141FreshwaterEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY
Ga0214163_101306343300021141FreshwaterNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0214163_112550613300021141FreshwaterRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY
Ga0213921_102679013300021952FreshwaterLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0222714_1062668813300021961Estuarine WaterTCEIPSETVKQMAIDLEETEWRDSYIAHYDIEEDEFKDLVKMFKLHADAGHYLVAWY
Ga0222713_1002894113300021962Estuarine WaterYGYTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0222713_1045472833300021962Estuarine WaterKIPNEIIKDMAESLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0222713_1058814823300021962Estuarine WaterMADDLEATEWRDSYIENYDIVEEEFKDLVRMFRLHADAGHFLVSSW
Ga0222712_1005268213300021963Estuarine WaterIPNEIIKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAWY
Ga0214919_1006157913300023184FreshwaterDSYIQNYDIEEQEFKDLARMFRLHADAGHYLVAWY
Ga0244777_1088296033300024343EstuarineQMADDLEATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0244775_1007037013300024346EstuarineMADDLEATEWRDSYIENYDIVEEEFRDLVKMFRLHADAGHYLVSSW
Ga0244775_1132850213300024346EstuarineDLETFETPNETVKQMADDLGATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0255176_103856013300024507FreshwaterETYETPNETVKQMADDLEATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0255108_108398723300027149FreshwaterGYTNESDIIPNEIIKDMAEGLEATEWRDSYIENYDIEEQEFKDLVKMFRLHADAGHYLVANY
Ga0255112_108997613300027150FreshwaterYTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAN
Ga0208797_100201213300027186EstuarineVPNETVKQMADDLEATEWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0208675_102840223300027189EstuarineEIVRDMADDLEATEWRDSYIENYDIVEEEFRDLVKMFRLHADAGHYLVSSW
Ga0208926_105686413300027205EstuarineNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0208554_107173223300027212EstuarineWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0255129_106561313300027286FreshwaterVISNEIISEMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0255124_100983113300027299FreshwaterKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0255124_109083513300027299FreshwaterEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0255127_106975113300027301FreshwaterTNESDEIPNEIVKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0208923_101755613300027320EstuarineISNETVKKMADDLEATEWRDSYIENYDIEKQEFKDLVKMFRLHADAGHFLMSSW
Ga0208923_110084423300027320EstuarineWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0255118_107596823300027593FreshwaterTEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0255118_108384713300027593FreshwaterSNEIVRDMAEGLEATEWRDSYIQNYDIEEEEFRDLVKMFRLHADAGHYLVSSW
Ga0255122_107522613300027595FreshwaterRDSYIQNYDIEKQEFEDLVRMFRLHADAGHYLLAWY
Ga0255117_103717713300027600FreshwaterKDMAEGLEATEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0255117_109804513300027600FreshwaterKQMADDLGATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0208974_105378413300027608Freshwater LenticDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLLAWY
Ga0208974_106670333300027608Freshwater LenticEWRDSYIQNYDIEEQEFKDLVKMFRLHADAGHYLVAWY
Ga0208942_120339913300027627Freshwater LenticDLEATEWRDSYIENYDIVEEEFKDLVKMFRLHADAGHYLVSSW
Ga0209599_1002251713300027710Deep SubsurfacePEFIAYYDIEEEEFKDFVKMFRLHADAGHFLVSSY
Ga0209597_132626243300027746Freshwater LakeLETTEWRDSYIVNYDIEEEEFKDFVKMFRLHADAGHYLESSW
Ga0209354_1036293133300027808Freshwater LakeFETPNETVKQMADDLGATEWRDSYIQNYDIQEEEFRDLVRMFRLHADAGHYLLAWY
Ga0315899_1143518423300031784FreshwaterWRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0315905_1044651113300032092FreshwaterDPETCETPNETVKQMADDLEATEWRESYIQNYDIVEEEFKDLVRMFRLHADAGHYLLAWY
Ga0316617_10181862723300033557SoilRDSYIENYDIEEQEFKDLVRMFRLHADAGHYLLAWF
Ga0334985_0628681_2_1273300034018FreshwaterGATEWRDSYIQNYDIQEEEFRDLVRMFRLHADAGHYLLAWY
Ga0335029_0763096_329_4693300034102FreshwaterMADDLEKTEFIPEYIAHYDIEQDEFKDLVKMFRLHADAGHYLVAWY
Ga0335037_0547350_27_1673300034107FreshwaterMAEGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLLAWY
Ga0335050_0245868_741_8813300034108FreshwaterMADGLEATEWRDSYIQNYDIEEQEFKDLVRMFRLHADAGHYLVAFY
Ga0335007_0243413_29_1753300034283FreshwaterMQMATDLEETEWRDSYIQNYDIEEEEFKDLVKMFRLHADAGHYLLAWY


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