NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F084334

Metagenome Family F084334

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084334
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 49 residues
Representative Sequence MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS
Number of Associated Samples 63
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 36.61 %
% of genes from short scaffolds (< 2000 bps) 78.57 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (72.321 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(26.786 % of family members)
Environment Ontology (ENVO) Unclassified
(68.750 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.036 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 46.00%    β-sheet: 0.00%    Coil/Unstructured: 54.00%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF11211DUF2997 8.93
PF13946DUF4214 8.04
PF137592OG-FeII_Oxy_5 2.68
PF00124Photo_RC 1.79
PF13884Peptidase_S74 0.89
PF10979DUF2786 0.89
PF04606Ogr_Delta 0.89



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.32 %
All OrganismsrootAll Organisms27.68 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002231|KVRMV2_100063874Not Available2431Open in IMG/M
3300002231|KVRMV2_100132978Not Available1983Open in IMG/M
3300002231|KVRMV2_100314554Not Available1227Open in IMG/M
3300002488|JGI25128J35275_1095353Not Available603Open in IMG/M
3300005404|Ga0066856_10069281All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21541Open in IMG/M
3300005432|Ga0066845_10286870Not Available636Open in IMG/M
3300006024|Ga0066371_10141280All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae737Open in IMG/M
3300006332|Ga0068500_1103895Not Available10809Open in IMG/M
3300006332|Ga0068500_1443984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae657Open in IMG/M
3300006332|Ga0068500_1601026All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae539Open in IMG/M
3300006565|Ga0100228_1113283Not Available805Open in IMG/M
3300006565|Ga0100228_1210562Not Available673Open in IMG/M
3300006735|Ga0098038_1010851All Organisms → Viruses3570Open in IMG/M
3300006735|Ga0098038_1244267All Organisms → Viruses568Open in IMG/M
3300006737|Ga0098037_1002862Not Available7447Open in IMG/M
3300006752|Ga0098048_1255064All Organisms → Viruses512Open in IMG/M
3300006793|Ga0098055_1352379All Organisms → Viruses547Open in IMG/M
3300006928|Ga0098041_1072316Not Available1113Open in IMG/M
3300006928|Ga0098041_1108804All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae895Open in IMG/M
3300006928|Ga0098041_1126056Not Available825Open in IMG/M
3300009550|Ga0115013_10325248All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.959Open in IMG/M
3300009593|Ga0115011_10144284Not Available1722Open in IMG/M
3300009593|Ga0115011_10862791Not Available755Open in IMG/M
3300009593|Ga0115011_11099088Not Available679Open in IMG/M
3300009790|Ga0115012_10082954All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM22213Open in IMG/M
3300009790|Ga0115012_10241256All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1340Open in IMG/M
3300009790|Ga0115012_11622003Not Available561Open in IMG/M
3300009794|Ga0105189_1004581Not Available1285Open in IMG/M
3300010932|Ga0137843_1046107Not Available549Open in IMG/M
3300010934|Ga0137844_1149897All Organisms → Viruses941Open in IMG/M
3300011013|Ga0114934_10106423All Organisms → Viruses1359Open in IMG/M
3300012952|Ga0163180_10008288All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium5762Open in IMG/M
3300012953|Ga0163179_10065477Not Available2540Open in IMG/M
3300012953|Ga0163179_10916553Not Available759Open in IMG/M
3300012953|Ga0163179_11029721Not Available719Open in IMG/M
3300012953|Ga0163179_11159984Not Available681Open in IMG/M
3300012953|Ga0163179_11672128Not Available578Open in IMG/M
3300012954|Ga0163111_11516470Not Available664Open in IMG/M
3300017720|Ga0181383_1049022Not Available1134Open in IMG/M
3300017720|Ga0181383_1056654All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21053Open in IMG/M
3300017720|Ga0181383_1154386Not Available616Open in IMG/M
3300017720|Ga0181383_1212303Not Available513Open in IMG/M
3300017731|Ga0181416_1088331Not Available737Open in IMG/M
3300017745|Ga0181427_1039938Not Available1165Open in IMG/M
3300017750|Ga0181405_1142784Not Available594Open in IMG/M
3300017753|Ga0181407_1099585Not Available732Open in IMG/M
3300017753|Ga0181407_1129064Not Available629Open in IMG/M
3300017764|Ga0181385_1265061Not Available514Open in IMG/M
3300017765|Ga0181413_1149502Not Available704Open in IMG/M
3300017767|Ga0181406_1012131All Organisms → Viruses → Predicted Viral2777Open in IMG/M
3300017767|Ga0181406_1019170All Organisms → Viruses2172Open in IMG/M
3300017768|Ga0187220_1025923Not Available1765Open in IMG/M
3300017771|Ga0181425_1113886Not Available864Open in IMG/M
3300017773|Ga0181386_1196053Not Available608Open in IMG/M
3300017779|Ga0181395_1090856Not Available982Open in IMG/M
3300017782|Ga0181380_1137523All Organisms → Viruses836Open in IMG/M
3300017786|Ga0181424_10253192Not Available737Open in IMG/M
3300020248|Ga0211584_1040177Not Available722Open in IMG/M
3300020310|Ga0211515_1002748All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium4813Open in IMG/M
3300020411|Ga0211587_10017164Not Available3685Open in IMG/M
3300020411|Ga0211587_10087860Not Available1362Open in IMG/M
3300020411|Ga0211587_10220444Not Available790Open in IMG/M
3300020416|Ga0211644_10003134Not Available7635Open in IMG/M
3300020416|Ga0211644_10067559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21446Open in IMG/M
3300020421|Ga0211653_10184497Not Available917Open in IMG/M
3300020421|Ga0211653_10297380Not Available700Open in IMG/M
3300020428|Ga0211521_10188463Not Available947Open in IMG/M
3300020428|Ga0211521_10203592Not Available904Open in IMG/M
3300020438|Ga0211576_10007115Not Available7337Open in IMG/M
3300020438|Ga0211576_10030677All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium3182Open in IMG/M
3300020438|Ga0211576_10083979Not Available1772Open in IMG/M
3300020445|Ga0211564_10000737Not Available16741Open in IMG/M
3300020445|Ga0211564_10029833All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM22730Open in IMG/M
3300020445|Ga0211564_10092967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21503Open in IMG/M
3300020445|Ga0211564_10377209Not Available697Open in IMG/M
3300020451|Ga0211473_10454929Not Available654Open in IMG/M
3300020457|Ga0211643_10084361Not Available1570Open in IMG/M
3300020457|Ga0211643_10359745Not Available715Open in IMG/M
3300020457|Ga0211643_10455340Not Available629Open in IMG/M
3300020457|Ga0211643_10645117Not Available517Open in IMG/M
3300020465|Ga0211640_10677613Not Available551Open in IMG/M
3300020467|Ga0211713_10016758All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM23707Open in IMG/M
3300020472|Ga0211579_10011787All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium5891Open in IMG/M
3300020472|Ga0211579_10128311Not Available1504Open in IMG/M
3300020472|Ga0211579_10146974Not Available1388Open in IMG/M
3300020472|Ga0211579_10577890Not Available631Open in IMG/M
3300022074|Ga0224906_1057642Not Available1226Open in IMG/M
3300024344|Ga0209992_10110603Not Available1224Open in IMG/M
3300024344|Ga0209992_10345236Not Available599Open in IMG/M
3300025110|Ga0208158_1031818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 31343Open in IMG/M
3300025110|Ga0208158_1044866All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S08-C6201098Open in IMG/M
3300025110|Ga0208158_1070860Not Available838Open in IMG/M
3300025132|Ga0209232_1025222Not Available2310Open in IMG/M
3300025132|Ga0209232_1063742Not Available1313Open in IMG/M
3300025132|Ga0209232_1120232Not Available867Open in IMG/M
3300025132|Ga0209232_1191078Not Available630Open in IMG/M
3300025151|Ga0209645_1112204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales873Open in IMG/M
3300027906|Ga0209404_10251633All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21113Open in IMG/M
3300027906|Ga0209404_10436712Not Available858Open in IMG/M
3300027906|Ga0209404_10821699Not Available632Open in IMG/M
3300029787|Ga0183757_1054410Not Available672Open in IMG/M
3300031773|Ga0315332_10000319Not Available20716Open in IMG/M
3300031773|Ga0315332_10011913Not Available5187Open in IMG/M
3300031774|Ga0315331_10000559Not Available26089Open in IMG/M
3300031774|Ga0315331_10190192Not Available1527Open in IMG/M
3300031774|Ga0315331_10317260Not Available1147Open in IMG/M
3300031775|Ga0315326_10026912Not Available3520Open in IMG/M
3300032006|Ga0310344_10007782Not Available7992Open in IMG/M
3300032011|Ga0315316_10448947Not Available1082Open in IMG/M
3300032032|Ga0315327_10257064All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM21096Open in IMG/M
3300032047|Ga0315330_10235507Not Available1173Open in IMG/M
3300032047|Ga0315330_10643569Not Available624Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine26.79%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine26.79%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater17.86%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater8.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.36%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine4.46%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment2.68%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.68%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.89%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.89%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.89%
Subsea PoolEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool0.89%
Subsea Pool Microbial MatEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool Microbial Mat0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005432Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78EnvironmentalOpen in IMG/M
3300006024Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_BEnvironmentalOpen in IMG/M
3300006332Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200mEnvironmentalOpen in IMG/M
3300006565Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125mEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300009794Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245EnvironmentalOpen in IMG/M
3300010932Freshwater microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV7-P1EnvironmentalOpen in IMG/M
3300010934Microbial mat microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV9-P3EnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020248Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556118-ERR599141)EnvironmentalOpen in IMG/M
3300020310Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020416Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020467Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KVRMV2_10006387413300002231Marine SedimentLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS*
KVRMV2_10013297893300002231Marine SedimentVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS*
KVRMV2_10031455433300002231Marine SedimentMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDP
JGI25128J35275_109535313300002488MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPV
Ga0066856_1006928113300005404MarineMLSDVQLALLYPFVFFFTALSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA*
Ga0066845_1028687023300005432MarineMLSDIQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG*
Ga0066371_1014128013300006024MarineMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG*
Ga0068500_110389593300006332MarineMLSDVQLALLYPFVFFFTALSIYILLTPQDDGDDDPPDRGTLIPAYYSGA*
Ga0068500_144398423300006332MarineMLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSGT*
Ga0068500_160102613300006332MarinePFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSGT*
Ga0100228_111328323300006565MarineMLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYPAG*
Ga0100228_121056223300006565MarineMLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYQAS*
Ga0098038_101085173300006735MarineMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS*
Ga0098038_124426733300006735MarineFYKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS*
Ga0098037_100286263300006737MarineMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS*
Ga0098048_125506423300006752MarineMLSDVQLALLYPFVFFFTVLSLYLLINPQDDEDDDPPDRGTLIPSYYPAG*
Ga0098055_135237923300006793MarineMLSDVQLALLYPFVFFFTALSLYVLLNPQDDEDDDPPDRGTLIPSYYPAG*
Ga0098041_107231633300006928MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYPAG*
Ga0098041_110880443300006928MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYPAG*
Ga0098041_112605633300006928MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG*
Ga0115013_1032524823300009550MarineMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSGT*
Ga0115011_1014428433300009593MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYQAS*
Ga0115011_1086279123300009593MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDGDDDPPDRGTLIPSYYQAS*
Ga0115011_1109908823300009593MarineMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG*
Ga0115012_1008295483300009790MarineMLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA*
Ga0115012_1024125653300009790MarineFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG*
Ga0115012_1162200333300009790MarineMLSDVQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYYQAS*
Ga0105189_100458123300009794Marine OceanicMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPSYYQAS*
Ga0137843_104610713300010932Subsea PoolMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS*
Ga0137844_114989733300010934Subsea Pool Microbial MatMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPXYYQAS*
Ga0114934_1010642373300011013Deep SubsurfaceFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS*
Ga0163180_10008288113300012952SeawaterMLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGT*
Ga0163179_1006547733300012953SeawaterMLSDVQLALLYPFVFFFTALFLYVLINSQDDEDDDPPDRGTLIPAYYSAS*
Ga0163179_1091655323300012953SeawaterMLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS*
Ga0163179_1102972113300012953SeawaterYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS*
Ga0163179_1115998443300012953SeawaterMLSDVQLALLYPFVFFFTALSLYILINSQDDEDDDPPDRGTLIPSYYQAS*
Ga0163179_1167212813300012953SeawaterMLSDVQLALLYPFVFFFTALSIYLLINPQDDEDDDPPDRGTLIPSYYQAS*
Ga0163111_1151647013300012954Surface SeawaterMLSDVQLALLYPFVFFFTALSLYILLNPQDDGEDDPPVRGTLIPSYYPAG*
Ga0181383_104902213300017720SeawaterMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYSSSSP
Ga0181383_105665413300017720SeawaterLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG
Ga0181383_115438613300017720SeawaterNIFIFYKHFYSYQLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG
Ga0181383_121230323300017720SeawaterMLSDVQLALLYPFVFFFTALSLYILINPQDDGDDDPPDRGTLIPSYYPAG
Ga0181416_108833133300017731SeawaterDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0181427_103993813300017745SeawaterNIFIFYKHFYLYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0181405_114278433300017750SeawaterYKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0181407_109958523300017753SeawaterMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS
Ga0181407_112906413300017753SeawaterMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAY
Ga0181385_126506133300017764SeawaterQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0181413_114950213300017765SeawaterMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPYRGTL
Ga0181406_101213113300017767SeawaterMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDMGTLIPSYYQAS
Ga0181406_101917043300017767SeawaterMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYSAS
Ga0187220_102592313300017768SeawaterMLSDIQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDR
Ga0181425_111388613300017771SeawaterYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0181386_119605333300017773SeawaterDVQLALLYPFVFFFTALSLYILFNPQDDEDDDPPDRGTLIPSYYPAG
Ga0181395_109085613300017779SeawaterKHFYPYQSIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG
Ga0181380_113752343300017782SeawaterIFILYKHFYPYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS
Ga0181424_1025319243300017786SeawaterALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS
Ga0211584_104017733300020248MarineMLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYQAS
Ga0211515_100274893300020310MarineMLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGT
Ga0211587_10017164123300020411MarineFYPYQLIMLSDLQLALLYPFVFFFTTLSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA
Ga0211587_1008786013300020411MarineMLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0211587_1022044413300020411MarineMLSDVQLALLYPFVFFFTALSLYLLLNPQDDSDDDPPDRGTLIPSYYQAS
Ga0211644_10003134203300020416MarineMLSDIQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYQAS
Ga0211644_1006755933300020416MarineMLSDLQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYYQAS
Ga0211653_1018449723300020421MarineMLSDVQLALLYPFVFFFTVLSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0211653_1029738043300020421MarineLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0211521_1018846343300020428MarineLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS
Ga0211521_1020359243300020428MarineLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0211576_1000711563300020438MarineMLSDVQLALLYPFVFFFTALSLYVLINTQDDEDDDPPDKGTLIPAYYSAS
Ga0211576_1003067783300020438MarineMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS
Ga0211576_1008397933300020438MarineMLSDVQLAFLYPFVFFFTALSLYVLINTQDDEDDDPPDKGTLIPAYYQAS
Ga0211564_10000737313300020445MarineMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA
Ga0211564_1002983333300020445MarineMLSDVQLALLYPFVFFFTALSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA
Ga0211564_1009296723300020445MarineMLSDVQLALLYPFVFFFTALSIYLLLNPQDDEDDDPPDRGTLIPSYYPAG
Ga0211564_1037720933300020445MarineMLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDP
Ga0211473_1045492923300020451MarineMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPSYYQAS
Ga0211643_1008436143300020457MarineMLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAS
Ga0211643_1035974513300020457MarineIMLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0211643_1045534013300020457MarineMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG
Ga0211643_1064511713300020457MarineMLSDLQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYY
Ga0211640_1067761323300020465MarineMLSDIQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS
Ga0211713_1001675863300020467MarineMLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYPAG
Ga0211579_10011787133300020472MarineMLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA
Ga0211579_1012831123300020472MarineMLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSAS
Ga0211579_1014697423300020472MarineMLSDVQLALLYPFVFFFTALSIYLFINPQDDEDDDPPDKGTLIPAYYSAS
Ga0211579_1057789033300020472MarineMLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS
Ga0224906_105764213300022074SeawaterPYQSIMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0209992_1011060323300024344Deep SubsurfaceMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0209992_1034523613300024344Deep SubsurfaceMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS
Ga0208158_103181823300025110MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYPAG
Ga0208158_104486633300025110MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYPAG
Ga0208158_107086033300025110MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0209232_102522233300025132MarineMLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG
Ga0209232_106374213300025132MarineLLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG
Ga0209232_112023223300025132MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPVG
Ga0209232_119107813300025132MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTL
Ga0209645_111220433300025151MarineMLSDIQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0209404_1025163313300027906MarineFYKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPA
Ga0209404_1043671233300027906MarineMLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYQAS
Ga0209404_1082169923300027906MarineMLSDVQLALLYPFVFFFTALSLYLLINPQDDGDDDPPDRGTLIPSYYQAS
Ga0183757_105441033300029787MarineNILIFYKHFYSYQLIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS
Ga0315332_10000319403300031773SeawaterMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDKGTLIPSYYPAS
Ga0315332_10011913103300031773SeawaterMLSDVQLALLYPFVFFFTALSLYVLINTQNDEDDDPPDKGTLIPAYYSAS
Ga0315331_10000559433300031774SeawaterMLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPVG
Ga0315331_1019019233300031774SeawaterMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSGT
Ga0315331_1031726013300031774SeawaterMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDD
Ga0315326_1002691283300031775SeawaterMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG
Ga0310344_1000778233300032006SeawaterMLSDVQLALLYPFVFFFTALSIYILLTPQDDGDDDPPDRGTLIPAYYSGA
Ga0315316_1044894713300032011SeawaterVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG
Ga0315327_1025706463300032032SeawaterSYKHFYSYTLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDKGTLIPSYYPA
Ga0315330_1023550733300032047SeawaterMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPD
Ga0315330_1064356913300032047SeawaterFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.