NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084344

Metagenome / Metatranscriptome Family F084344

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084344
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 51 residues
Representative Sequence MTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGGGGSA
Number of Associated Samples 78
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 50.00 %
% of genes near scaffold ends (potentially truncated) 25.89 %
% of genes from short scaffolds (< 2000 bps) 77.68 %
Associated GOLD sequencing projects 65
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.536 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(42.857 % of family members)
Environment Ontology (ENVO) Unclassified
(91.964 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.036 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 43.14%    Coil/Unstructured: 56.86%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF03175DNA_pol_B_2 4.46
PF16778Phage_tail_APC 1.79
PF13884Peptidase_S74 0.89
PF01637ATPase_2 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1373Predicted ATPase, AAA+ superfamilyGeneral function prediction only [R] 0.89
COG1672Predicted ATPase, archaeal AAA+ ATPase superfamilyGeneral function prediction only [R] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.54 %
All OrganismsrootAll Organisms29.46 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10078955Not Available1237Open in IMG/M
3300001721|JGI24528J20060_1005579Not Available821Open in IMG/M
3300001731|JGI24514J20073_1016678Not Available696Open in IMG/M
3300002511|JGI25131J35506_1007193Not Available1559Open in IMG/M
3300002511|JGI25131J35506_1007723All Organisms → Viruses → Predicted Viral1499Open in IMG/M
3300002511|JGI25131J35506_1012109All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1188Open in IMG/M
3300002511|JGI25131J35506_1017797Not Available978Open in IMG/M
3300002514|JGI25133J35611_10087818Not Available941Open in IMG/M
3300002760|JGI25136J39404_1010427All Organisms → Viruses → Predicted Viral1646Open in IMG/M
3300002760|JGI25136J39404_1040536Not Available859Open in IMG/M
3300002760|JGI25136J39404_1044004Not Available826Open in IMG/M
3300002760|JGI25136J39404_1089336Not Available578Open in IMG/M
3300003542|FS900DNA_10264942Not Available1022Open in IMG/M
3300003690|PicViral_1004821All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium3368Open in IMG/M
3300003690|PicViral_1006528All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium3888Open in IMG/M
3300004829|Ga0068515_102213All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2489Open in IMG/M
3300004829|Ga0068515_127011Not Available718Open in IMG/M
3300006310|Ga0068471_1323604Not Available945Open in IMG/M
3300006324|Ga0068476_1011026Not Available788Open in IMG/M
3300006325|Ga0068501_1063142Not Available781Open in IMG/M
3300006340|Ga0068503_10300226All Organisms → Viruses → Predicted Viral1197Open in IMG/M
3300006736|Ga0098033_1024838All Organisms → Viruses → Predicted Viral1842Open in IMG/M
3300006738|Ga0098035_1162190Not Available756Open in IMG/M
3300006738|Ga0098035_1244880Not Available591Open in IMG/M
3300006750|Ga0098058_1022534Not Available1845Open in IMG/M
3300006753|Ga0098039_1009415All Organisms → Viruses → Predicted Viral3612Open in IMG/M
3300006753|Ga0098039_1043726All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1576Open in IMG/M
3300006753|Ga0098039_1054257All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1400Open in IMG/M
3300006753|Ga0098039_1155802Not Available780Open in IMG/M
3300006754|Ga0098044_1180317Not Available837Open in IMG/M
3300006754|Ga0098044_1380332Not Available532Open in IMG/M
3300006789|Ga0098054_1044435All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1714Open in IMG/M
3300006920|Ga0070748_1035072All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2040Open in IMG/M
3300006928|Ga0098041_1181429Not Available675Open in IMG/M
3300006947|Ga0075444_10414021Not Available505Open in IMG/M
3300007504|Ga0104999_1023203All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium3524Open in IMG/M
3300007508|Ga0105011_1003147All Organisms → cellular organisms → Bacteria14624Open in IMG/M
3300007514|Ga0105020_1423284Not Available744Open in IMG/M
3300007515|Ga0105021_1004271All Organisms → cellular organisms → Bacteria14296Open in IMG/M
3300008050|Ga0098052_1163287Not Available878Open in IMG/M
3300008216|Ga0114898_1016174Not Available2686Open in IMG/M
3300008216|Ga0114898_1041808All Organisms → Viruses → Predicted Viral1490Open in IMG/M
3300008217|Ga0114899_1026612All Organisms → Viruses → Predicted Viral2188Open in IMG/M
3300008217|Ga0114899_1043571Not Available1625Open in IMG/M
3300008217|Ga0114899_1229254Not Available579Open in IMG/M
3300008219|Ga0114905_1022220Not Available2497Open in IMG/M
3300008220|Ga0114910_1052805Not Available1297Open in IMG/M
3300008220|Ga0114910_1201121Not Available548Open in IMG/M
3300009132|Ga0118730_1023020All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.5199Open in IMG/M
3300009409|Ga0114993_10200210All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1544Open in IMG/M
3300009413|Ga0114902_1069794Not Available978Open in IMG/M
3300009413|Ga0114902_1141170Not Available617Open in IMG/M
3300010155|Ga0098047_10042117Not Available1812Open in IMG/M
3300010155|Ga0098047_10191613Not Available785Open in IMG/M
3300011013|Ga0114934_10226583Not Available859Open in IMG/M
3300017757|Ga0181420_1023617All Organisms → Viruses → Predicted Viral2042Open in IMG/M
3300017760|Ga0181408_1070473Not Available921Open in IMG/M
3300017775|Ga0181432_1037374All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1323Open in IMG/M
3300017775|Ga0181432_1280689Not Available527Open in IMG/M
3300021353|Ga0206693_1477085Not Available591Open in IMG/M
3300021791|Ga0226832_10030376Not Available1806Open in IMG/M
3300021791|Ga0226832_10042379All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300022072|Ga0196889_1092613Not Available556Open in IMG/M
(restricted) 3300023210|Ga0233412_10172835Not Available931Open in IMG/M
3300025049|Ga0207898_1026039Not Available742Open in IMG/M
3300025049|Ga0207898_1049420Not Available516Open in IMG/M
3300025050|Ga0207892_1004603All Organisms → Viruses → Predicted Viral1382Open in IMG/M
3300025050|Ga0207892_1039167Not Available552Open in IMG/M
3300025052|Ga0207906_1046562Not Available584Open in IMG/M
3300025069|Ga0207887_1008849Not Available1550Open in IMG/M
3300025072|Ga0208920_1000638All Organisms → cellular organisms → Bacteria8914Open in IMG/M
3300025103|Ga0208013_1123394Not Available637Open in IMG/M
3300025125|Ga0209644_1004871Not Available2672Open in IMG/M
3300025141|Ga0209756_1014643All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Haliea → unclassified Haliea → Haliea sp.4858Open in IMG/M
3300025141|Ga0209756_1292556Not Available578Open in IMG/M
3300025168|Ga0209337_1005713All Organisms → cellular organisms → Bacteria8447Open in IMG/M
3300025241|Ga0207893_1015136Not Available1057Open in IMG/M
3300025244|Ga0207908_1012541Not Available1186Open in IMG/M
3300025251|Ga0208182_1056328All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium797Open in IMG/M
3300025260|Ga0207895_1065216Not Available591Open in IMG/M
3300025264|Ga0208029_1017391All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1850Open in IMG/M
3300025264|Ga0208029_1046819Not Available923Open in IMG/M
3300025267|Ga0208179_1081263All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium667Open in IMG/M
3300025268|Ga0207894_1093580Not Available507Open in IMG/M
3300025270|Ga0208813_1045262Not Available986Open in IMG/M
3300025274|Ga0208183_1068718Not Available681Open in IMG/M
3300025286|Ga0208315_1105235Not Available666Open in IMG/M
3300025286|Ga0208315_1125994Not Available588Open in IMG/M
3300025300|Ga0208181_1032009All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1177Open in IMG/M
3300025652|Ga0208134_1078019Not Available967Open in IMG/M
3300027844|Ga0209501_10175089Not Available1401Open in IMG/M
3300027847|Ga0209402_10378707Not Available859Open in IMG/M
3300028022|Ga0256382_1038216Not Available1092Open in IMG/M
3300028022|Ga0256382_1175377Not Available512Open in IMG/M
3300028448|Ga0256383_111180Not Available723Open in IMG/M
3300031803|Ga0310120_10049198All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2489Open in IMG/M
3300031804|Ga0310124_10702421Not Available573Open in IMG/M
3300032127|Ga0315305_1122289Not Available688Open in IMG/M
3300032146|Ga0315303_1039158Not Available971Open in IMG/M
3300032278|Ga0310345_10057101All Organisms → cellular organisms → Bacteria3331Open in IMG/M
3300032278|Ga0310345_11673234Not Available621Open in IMG/M
3300032820|Ga0310342_101597838Not Available777Open in IMG/M
3300032820|Ga0310342_101814188Not Available728Open in IMG/M
3300032820|Ga0310342_102038394Not Available686Open in IMG/M
3300032820|Ga0310342_103327444Not Available532Open in IMG/M
3300034629|Ga0326756_052131Not Available510Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine42.86%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean21.43%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.36%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine4.46%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine3.57%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.57%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.68%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.68%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.79%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water1.79%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.79%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume1.79%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.89%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.89%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.89%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.89%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.89%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001721Marine viral communities from the Pacific Ocean - LP-54EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003542Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNAEnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007508Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007514Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007515Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009132Combined Assembly of Gp0139359, Gp0139510EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021353Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025244Marine viral communities from the Deep Pacific Ocean - MSP-81 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025260Marine viral communities from the Deep Pacific Ocean - MSP112 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028448Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 300mEnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300032127Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032146Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_Tmax_316 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032161Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1007895533300001450MarineMMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVVARIGGGSQ*
JGI24528J20060_100557913300001721MarineWLMTFFNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGNGGAA*
JGI24514J20073_101667823300001731MarineMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGNGGGV*
JGI25131J35506_100719333300002511MarineMTFINSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA*
JGI25131J35506_100772333300002511MarineMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV*
JGI25131J35506_101210913300002511MarineMTFGNSVMGGFGVAAGVVTVLAVANGLSTYIFDGQTITQKVDARLGSGGAV*
JGI25131J35506_101779723300002511MarineMTFFNSILAGFGVSVGVLTVLAVSNGLSTYIFDGQTLQSKVNARIGSGGA*
JGI25133J35611_1008781823300002514MarineMTFLNAVMGGFGVAAGVVTVLSISNGISTYIFDGQTLESKVAGRIGGSA*
JGI25136J39404_101042713300002760MarineHTPCYMSAVFGGGTMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGNGGTA*
JGI25136J39404_104053613300002760MarineMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGGGGSA*
JGI25136J39404_104400423300002760MarineMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGNGGAV*
JGI25136J39404_108933623300002760MarineMTFINSVAGGFGVAASVITVLAISNGLSTWIFDGQTITQKVDARLGGGGTV*
FS900DNA_1026494223300003542Diffuse Hydrothermal Flow Volcanic VentMTFFNSIAGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGAV*
PicViral_100482163300003690Marine, Hydrothermal Vent PlumeMTFFNSALAGFGVSVGVLTILAVSNGLSTYIFDGQTLQSKVNARIGSGGA*
PicViral_100652873300003690Marine, Hydrothermal Vent PlumeMTFFNSIMGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVNARIGGNGGA*
Ga0068515_10221323300004829Marine WaterMAFLNSMMAGFGVAAGVVTVLAVSNGLSTYIFNGETLESKVNSRIGGGSA*
Ga0068515_12701113300004829Marine WaterMAFFNSMMAGFGVAAGVVTVLAVSNGLSTYIFNGETLESKVNARIGGGSA*
Ga0068471_132360423300006310MarineMTFFNSVMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV*
Ga0068476_101102613300006324MarineMSQVFGGGSMTFFNSVMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV
Ga0068501_106314233300006325MarineMTFFNSILAGFGVSVGVLTVLAVSNGLSPYVFDGQTLQSKVNARIGGGA*
Ga0068503_1030022613300006340MarineMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGAV
Ga0098033_102483823300006736MarineMTFLNSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGV*
Ga0098035_116219013300006738MarineMTFLNSVAGGFGVAAAVVTVLAVSGGLSMWIFDGQTISSKVAGRIGG
Ga0098035_124488033300006738MarineMTFLNSVAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV*
Ga0098058_102253433300006750MarineMAFINSIMGGFGVSVAVLSVLAISNGLSTWVFDGETLESKVNARIGGSQ*
Ga0098039_100941553300006753MarineMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGTNGGV*
Ga0098039_104372643300006753MarineMAFFNSLMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVNARVGGGSA*
Ga0098039_105425723300006753MarineMTFINSVMGGFGVAAGVVTVLAISNGLSTWVFDGQSITQKVDAKLGSGGSV*
Ga0098039_115580223300006753MarineMTFFNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGSGGSA*
Ga0098044_118031713300006754MarineSWRFALMTFINSVAGGFGVAAAVVTVLAISDGLSTWLFDGQTISSKVQGRIGGGN*
Ga0098044_138033223300006754MarineMTFLNAVMGGFGVAAGVVTVLAISNGISTYIFDGQTLESKVAGRIGGSA*
Ga0098054_104443523300006789MarineMAFFNSLMAGFGVAAGVVTVLAISNGLSTYIFNGETLESKVNARIGNGGSA*
Ga0070748_103507223300006920AqueousMAFFNSMMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVVARIGGGTQ*
Ga0098041_118142923300006928MarineMTFINSVAGGFGVAAAVVTVLAISDGLSTWLFDGQTISSKVQGRIGGGN*
Ga0075444_1041402133300006947MarineHRTIYMAFFNSMMAGFGVAAGVVTVLAVSNGLSTYIFNGETLESKVNSRIGGGSA*
Ga0104999_102320353300007504Water ColumnMAGFGVAAGVVTILAISNGLSTYIFNGETLESKVNARIGNGGSA*
Ga0105011_1003147173300007508MarineMAFFNSLMAGFGVAAGVVTILAISNGLSTYIFNGETLESKVNARIGNGGSA*
Ga0105020_1018269163300007514MarineGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0105020_142328423300007514MarineMTFLNSVAGGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0105021_1004271133300007515MarineMTFINSVAGGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0098052_116328733300008050MarineMTFLNAVMGGFGVAAGVVTVLAISNGISTWIFDGQTLESKVSGRIGGSA*
Ga0114898_101617423300008216Deep OceanMTFFNSILGGFGLSAGVLTVLAVSNGLSTYVFDGQTLQSKVNARIGSGGA*
Ga0114898_104180833300008216Deep OceanMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV*
Ga0114899_102661213300008217Deep OceanMSAVFGGGSMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV*
Ga0114899_104357123300008217Deep OceanMTFFNSILAGFGLSAGVLTVLAVSNGLSTYVFDGQTLQSKVNARIGSGGA*
Ga0114899_106527713300008217Deep OceanGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0114899_122925413300008217Deep OceanMSQLFGVGSMTFLNSVMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGGNGGAV*
Ga0114905_102222013300008219Deep OceanMTFFNSILAGFGLSAGVLTVLAVSNGLSTYIFDGQTLQSKVNARIGSGGA*
Ga0114910_105280533300008220Deep OceanMTFFNSVMGGFGVAAGVVTVLAISNGLSTWVFDGQSITQKVDARLGGGGSA*
Ga0114910_120112113300008220Deep OceanMTFLNSVIGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV*
Ga0118730_102302013300009132MarineMTFINSVVGGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0114993_1020021023300009409MarineMGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA*
Ga0114902_106979413300009413Deep OceanVSAGESMTFLNSVAGGFGEAAAVVTVLAVSDGLSTWILDGQTISSKVAGRIGGAGGV*
Ga0114902_114117023300009413Deep OceanMSAVFGGGSMTFLNSVIGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV*
Ga0098047_1004211743300010155MarineMTFLNSVAGGVGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV*
Ga0098047_1019161333300010155MarineFLNSVAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV*
Ga0114934_1022658333300011013Deep SubsurfaceKWKSFGRLGLMTFLNSVAGGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGGGN*
Ga0181420_102361733300017757SeawaterMTFLNAVMSGFGVAAGVVTVLAISNGISTYIFDGQTLESKVAGRIGGSA
Ga0181408_107047323300017760SeawaterMTFINAVMGGFGVAAGVVTVLAISNGISTYIFDGQTLESKVAGRIGGS
Ga0181432_103737423300017775SeawaterMSQVFGGGSMTFVNSVMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGTA
Ga0181432_128068913300017775SeawaterPDYPLLMRVRIHTPCYMSEVFGGGSMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGAV
Ga0206693_147708523300021353SeawaterSVAGGFGVATAVITVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0226832_1003037623300021791Hydrothermal Vent FluidsMSQLFGVGSMTFLNSVAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0226832_1004237933300021791Hydrothermal Vent FluidsMTFLNSVAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0196889_109261313300022072AqueousFFNSMMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVVARIGGGTQ
(restricted) Ga0233412_1017283523300023210SeawaterMTFLNSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0207898_102603913300025049MarineSMTFFNSIAGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGAV
Ga0207898_104942023300025049MarineMTFLNSVMGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0207892_100460323300025050MarineESMTFLNSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0207892_103916713300025050MarineMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV
Ga0207906_104656213300025052MarineFNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGNGGAA
Ga0207887_100884923300025069MarineMTFFNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGNGGAA
Ga0208920_1000638133300025072MarineMAFFNSLMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVNARVGGGSA
Ga0208156_109523823300025082MarineAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0208013_112339423300025103MarineMTFLNAVMGGFGVAAGVVTVLAISNGISTYIFDGQTLESKVAGRIGGSA
Ga0209644_100487123300025125MarineMTFINSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0209756_101464333300025141MarineMAFFNSLMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVSARIGGGTA
Ga0209756_129255623300025141MarineMTFLNAVMGGFGVAAGVVTVLSISNGISTYIFDGQTLESKVAGRIGGSA
Ga0209337_100571353300025168MarineMAFFNSMMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVVARIGGGSQ
Ga0207893_101513613300025241Deep OceanMTFFNSIMGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVNARIGGNGGA
Ga0207908_101254123300025244Deep OceanMTFFNSIMGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVNARIGSNGGA
Ga0208182_105632823300025251Deep OceanSAVFGGGSMTFLNSVIGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV
Ga0207895_106521613300025260Deep OceanMTFINSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGA
Ga0208029_101739113300025264Deep OceanMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV
Ga0208029_104681923300025264Deep OceanMTFFNSILAGFGLSAGVLTVLAVSNGLSTYIFDGQTLQSKVNARIGSGGA
Ga0208179_108126313300025267Deep OceanAVGSMTFLNSVIGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV
Ga0207894_109358013300025268Deep OceanMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGSGGAA
Ga0208813_104526233300025270Deep OceanMTFFNSILAGFGLSAGVLTVLAVSNGLSTYVFDGQTLQSKVNARIGSGGA
Ga0208183_106871813300025274Deep OceanMSAVFGGGSMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGA
Ga0208315_110523513300025286Deep OceanGESMTFLNSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0208315_112599413300025286Deep OceanYMSAVFGGGSMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGGNGGAV
Ga0208181_103200933300025300Deep OceanMAGFGVAAGVVTVLAVSNGLSTYIFNGETLESKVNARIGGGSA
Ga0208134_107801933300025652AqueousMAFFNSMMAGFGVAAGVVTILAVSNGLSTYIFNGETLESKVVARIGGGTQ
Ga0209757_1018296913300025873MarineAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV
Ga0209757_1024990613300025873MarineGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARLGSGGAV
Ga0209501_1017508933300027844MarineMALVGGVCSMTFLNSVMGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0209402_1037870723300027847MarineMALVGGVCSMTFLNSLMGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0256382_103821623300028022SeawaterMTFINSVAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0256382_117537713300028022SeawaterGLRLNMAFFNSLMAGFGVAAGVVTVLAISNGLSTYIFNGETLESKVNARIGNGGSA
Ga0256383_11118013300028448SeawaterMTFLNSVAGGFGVAAAVVTVLAISDGLSTWVFDGQTISSKVKGRIGA
Ga0310120_1004919843300031803MarineTPPVLNGMRRGGCDMTFLNSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0310124_1070242113300031804MarineLGSMTFINSVAGGFGVAAAVVTVLAVSDGLSTWIFDGQTISSKVAGRIGGAGGA
Ga0315305_112228923300032127MarineGGFGVSVAVITVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0315303_103915823300032146MarineLAGGFGVSVAVITVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0315301_101994823300032161MarineVSVAVITVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0310345_1005710163300032278SeawaterMTFFNSVMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGSV
Ga0310345_1167323423300032278SeawaterMSEVFGGGSMTFVNSIMGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGSGGAV
Ga0310342_10159783823300032820SeawaterMTFFNSILAGFGVSVGVLTVLAVSNGLSTYIFDGQTLQSKVNARIGSGGA
Ga0310342_10181418813300032820SeawaterIHTTCYMSEVFGGGSMTFFNSIAGGFGVAAGVVTVLAISNGLSTYLFDGQTITQKVDARLGTNGGV
Ga0310342_10203839413300032820SeawaterVRFLDNMTFLNSVMGGFGVAAGVVTVLAISNGLSTYIFDGQTITQKVDARIGGGGSA
Ga0310342_10332744413300032820SeawaterMTFVNSIAGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0326756_052131_180_3353300034629Filtered SeawaterMTFFNSVMGGFGVAAAVVTVLAISDGLSTWIFDGQTISSKVNARIGSNGGA


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