Metagenome Family F084373

Basic Information
Family ID	F084373
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	45 residues
Representative Sequence	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMF
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.18 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Unclassified (54.464 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.786 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.73% β-sheet: 0.00% Coil/Unstructured: 60.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00072	Response_reg	41.07
PF02518	HATPase_c	33.04
PF08448	PAS_4	8.93
PF03401	TctC	1.79
PF04347	FliO	1.79
PF07883	Cupin_2	0.89
PF13578	Methyltransf_24	0.89
PF00440	TetR_N	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.79
COG3190	Flagellar biogenesis protein FliO	Cell motility [N]	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
All Organisms	root	All Organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
cellular organisms	root	All Organisms → cellular organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hankyongella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Hankyongella	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hankyongella ginsenosidimutans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Hankyongella → Hankyongella ginsenosidimutans	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
uncultured Microvirga sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hankyongella ginsenosidimutans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Hankyongella → Hankyongella ginsenosidimutans	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002077\|JGI24744J21845_10015999	Not Available	1495	Open in IMG/M
3300002245\|JGIcombinedJ26739_100081384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3007	Open in IMG/M
3300002906\|JGI25614J43888_10171438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300004281\|Ga0066397_10133615	Not Available	553	Open in IMG/M
3300004633\|Ga0066395_10881869	Not Available	541	Open in IMG/M
3300005175\|Ga0066673_10713787	Not Available	577	Open in IMG/M
3300005177\|Ga0066690_10351775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300005332\|Ga0066388_102018941	Not Available	1034	Open in IMG/M
3300005332\|Ga0066388_108460963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300005332\|Ga0066388_108669871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300005466\|Ga0070685_10924240	Not Available	650	Open in IMG/M
3300005530\|Ga0070679_102131987	Not Available	510	Open in IMG/M
3300005549\|Ga0070704_101803258	Not Available	566	Open in IMG/M
3300005554\|Ga0066661_10092082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1800	Open in IMG/M
3300005713\|Ga0066905_100901057	Not Available	774	Open in IMG/M
3300005764\|Ga0066903_101146056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1438	Open in IMG/M
3300005842\|Ga0068858_101969049	Not Available	578	Open in IMG/M
3300005937\|Ga0081455_10490931	Not Available	827	Open in IMG/M
3300006028\|Ga0070717_12129234	Not Available	504	Open in IMG/M
3300006038\|Ga0075365_10150087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1621	Open in IMG/M
3300006237\|Ga0097621_101215843	Not Available	710	Open in IMG/M
3300006796\|Ga0066665_10958364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300006847\|Ga0075431_100102824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	2949	Open in IMG/M
3300006854\|Ga0075425_100499571	Not Available	1400	Open in IMG/M
3300006854\|Ga0075425_102014070	Not Available	645	Open in IMG/M
3300006871\|Ga0075434_101896102	Not Available	602	Open in IMG/M
3300009012\|Ga0066710_100234402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2643	Open in IMG/M
3300009088\|Ga0099830_10539313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	954	Open in IMG/M
3300009101\|Ga0105247_10440988	Not Available	936	Open in IMG/M
3300009162\|Ga0075423_10464844	Not Available	1330	Open in IMG/M
3300010043\|Ga0126380_10889993	Not Available	738	Open in IMG/M
3300010046\|Ga0126384_11958374	Not Available	560	Open in IMG/M
3300010048\|Ga0126373_11047797	Not Available	881	Open in IMG/M
3300010358\|Ga0126370_10746248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	866	Open in IMG/M
3300010359\|Ga0126376_10821578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	910	Open in IMG/M
3300010360\|Ga0126372_12788365	Not Available	541	Open in IMG/M
3300010360\|Ga0126372_12946186	Not Available	528	Open in IMG/M
3300010361\|Ga0126378_10651858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	1166	Open in IMG/M
3300010366\|Ga0126379_13503278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300010398\|Ga0126383_11313872	Not Available	813	Open in IMG/M
3300010401\|Ga0134121_10788757	Not Available	911	Open in IMG/M
3300011270\|Ga0137391_11181422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300012208\|Ga0137376_10136667	All Organisms → cellular organisms → Bacteria → Proteobacteria	2102	Open in IMG/M
3300012209\|Ga0137379_11123001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300012351\|Ga0137386_10262989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1241	Open in IMG/M
3300012360\|Ga0137375_10088117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3208	Open in IMG/M
3300012941\|Ga0162652_100059493	Not Available	635	Open in IMG/M
3300012971\|Ga0126369_11772877	Not Available	706	Open in IMG/M
3300012984\|Ga0164309_10244790	Not Available	1261	Open in IMG/M
3300012985\|Ga0164308_10796792	Not Available	823	Open in IMG/M
3300013307\|Ga0157372_10594977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300015374\|Ga0132255_105898959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300016357\|Ga0182032_10611338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Hankyongella → Hankyongella ginsenosidimutans	908	Open in IMG/M
3300016387\|Ga0182040_10552256	Not Available	927	Open in IMG/M
3300018476\|Ga0190274_11013530	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300019361\|Ga0173482_10062792	Not Available	1246	Open in IMG/M
3300019869\|Ga0193705_1009832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2091	Open in IMG/M
3300020001\|Ga0193731_1003317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4134	Open in IMG/M
3300020016\|Ga0193696_1004071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4154	Open in IMG/M
3300021344\|Ga0193719_10065421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1578	Open in IMG/M
3300021405\|Ga0210387_11471154	Not Available	584	Open in IMG/M
3300021560\|Ga0126371_13716734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300022694\|Ga0222623_10028428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	2113	Open in IMG/M
3300022694\|Ga0222623_10354694	Not Available	560	Open in IMG/M
3300025898\|Ga0207692_10137081	Not Available	1388	Open in IMG/M
3300025898\|Ga0207692_10146663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300025934\|Ga0207686_11776616	Not Available	510	Open in IMG/M
3300026361\|Ga0257176_1026016	Not Available	866	Open in IMG/M
3300026508\|Ga0257161_1078059	Not Available	682	Open in IMG/M
3300026538\|Ga0209056_10499422	Not Available	639	Open in IMG/M
3300027633\|Ga0208988_1029273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	1418	Open in IMG/M
3300027846\|Ga0209180_10595362	Not Available	611	Open in IMG/M
3300028536\|Ga0137415_10965991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300028714\|Ga0307309_10134378	Not Available	615	Open in IMG/M
3300028719\|Ga0307301_10033848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1539	Open in IMG/M
3300028720\|Ga0307317_10140044	Not Available	810	Open in IMG/M
3300028744\|Ga0307318_10316807	Not Available	547	Open in IMG/M
3300028778\|Ga0307288_10019447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	2166	Open in IMG/M
3300028782\|Ga0307306_10120007	Not Available	713	Open in IMG/M
3300028803\|Ga0307281_10336179	Not Available	569	Open in IMG/M
3300028814\|Ga0307302_10153609	Not Available	1116	Open in IMG/M
3300028824\|Ga0307310_10499807	Not Available	612	Open in IMG/M
3300031231\|Ga0170824_104115481	Not Available	566	Open in IMG/M
3300031546\|Ga0318538_10380187	Not Available	763	Open in IMG/M
3300031681\|Ga0318572_10699211	Not Available	603	Open in IMG/M
3300031713\|Ga0318496_10323576	Not Available	851	Open in IMG/M
3300031736\|Ga0318501_10529684	Not Available	644	Open in IMG/M
3300031763\|Ga0318537_10129501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300031770\|Ga0318521_10315976	Not Available	921	Open in IMG/M
3300031770\|Ga0318521_10519316	Not Available	716	Open in IMG/M
3300031771\|Ga0318546_10167236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1489	Open in IMG/M
3300031778\|Ga0318498_10288884	Not Available	736	Open in IMG/M
3300031778\|Ga0318498_10533113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300031778\|Ga0318498_10537768	Not Available	513	Open in IMG/M
3300031779\|Ga0318566_10603197	Not Available	534	Open in IMG/M
3300031782\|Ga0318552_10383446	Not Available	716	Open in IMG/M
3300031792\|Ga0318529_10456473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300031796\|Ga0318576_10070423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1553	Open in IMG/M
3300031845\|Ga0318511_10065446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1490	Open in IMG/M
3300031859\|Ga0318527_10305361	Not Available	677	Open in IMG/M
3300031893\|Ga0318536_10234813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	932	Open in IMG/M
3300031894\|Ga0318522_10034313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1732	Open in IMG/M
3300031945\|Ga0310913_11128420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300032001\|Ga0306922_10573721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300032025\|Ga0318507_10161017	Not Available	962	Open in IMG/M
3300032035\|Ga0310911_10270141	Not Available	975	Open in IMG/M
3300032041\|Ga0318549_10218253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300032060\|Ga0318505_10048259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1816	Open in IMG/M
3300032065\|Ga0318513_10096627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1378	Open in IMG/M
3300032065\|Ga0318513_10402213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300032067\|Ga0318524_10700148	Not Available	534	Open in IMG/M
3300032076\|Ga0306924_10097455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3320	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Sediment	Environmental → Aquatic → Sediment	1.79%
Roots	Host-Associated → Plants → Roots	1.79%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24744J21845_100159991	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLAN
JGIcombinedJ26739_1000813842	3300002245	Forest Soil	MNEPEQRKEDRYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQ
JGI25614J43888_101714382	3300002906	Grasslands Soil	MDNLDESKEEKYVETARERRIANAVLLFFLLVVVGGGIWLANA
Ga0066397_101336151	3300004281	Tropical Forest Soil	MDEPEAPRGDKYVETARDRRIANALLLFFLIVVVGGGIWLAN
Ga0066395_108818691	3300004633	Tropical Forest Soil	MTEPEQTRQDKYVETARERRIANAVLLFFLLVVVGGGIWLANAMFEQR
Ga0066673_107137871	3300005175	Soil	MNEPEPPNGDKYVETARERRIANVVLLLFLVLIVGGGIWLANAMF
Ga0066690_103517751	3300005177	Soil	MDGSEQPRQEKYVETARDRRIANALLLFFVIVVVGGGIWL
Ga0066388_1020189411	3300005332	Tropical Forest Soil	MNEQEPLRPDDYVETPRDRRIANAVLLFFLILVVGGGIWLA
Ga0066388_1084609632	3300005332	Tropical Forest Soil	VIEPEQPQQDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRR
Ga0066388_1086698712	3300005332	Tropical Forest Soil	MEDSPPPKQDEYVETERDRRIANAVLVTFLVVLVGGGIWLANAMFDQRRIDDCVAQ
Ga0070685_109242402	3300005466	Switchgrass Rhizosphere	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLANA
Ga0070679_1021319872	3300005530	Corn Rhizosphere	MIRSMSEPGPDKYVETPRDRWVANAVLLFFLLLVVGGGIWLANAMFEQR
Ga0070704_1018032582	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNEPEPSNGDRYVETARERRIANAVLLLFLVLIVGGGIWLANAMF
Ga0066661_100920821	3300005554	Soil	MDGSEQPRQEKYVETARDRRIANALLLFFVIVVVGGGIW
Ga0066905_1009010571	3300005713	Tropical Forest Soil	MNEPEPPNGDKYVETARERRIANAVLLLFLVLIVGGGIWLANAMFDQR
Ga0066903_1011460561	3300005764	Tropical Forest Soil	MFARYHAGMNEPEPPNGDKYVETARERRIANAVLLLFLVLIV
Ga0068858_1019690491	3300005842	Switchgrass Rhizosphere	MIRSMSEPGPDKYVETPRDRWVANAVLLFFLLLVVGGGIWLAN
Ga0081455_104909311	3300005937	Tabebuia Heterophylla Rhizosphere	MSEPEQHGPDDYVETPRDRRIANALLLFFLIVVVGGGI
Ga0070717_121292341	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDEPETPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLAN
Ga0075365_101500871	3300006038	Populus Endosphere	MNEQEPLRPDDYVETPRDRRIANAVLLLFLVLIVGGGIWLAN
Ga0097621_1012158432	3300006237	Miscanthus Rhizosphere	MIRSMSEPGPDKYVETPRDRWVANAVLLFFLLQVVGGGIWLANA
Ga0066665_109583641	3300006796	Soil	MDEARPPNEYRETARERRIANLVLLVLLVVLVGGGLWLANAMFEQRMIDDCV
Ga0075431_1001028242	3300006847	Populus Rhizosphere	MSEQPGPEKYVETPRDRRIANAVLLLFLIIIVGGGIWLANA
Ga0075425_1004995712	3300006854	Populus Rhizosphere	MNEPEPPNGDKYVETARERRIANVVLLLFLVVIVGGGIWLANAMFEQRRL
Ga0075425_1020140702	3300006854	Populus Rhizosphere	MDEPEATKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFE
Ga0075434_1018961022	3300006871	Populus Rhizosphere	MSEPEQRRPDDYVETPRDRRIANALLLFFLIVVVGGGIWLAN
Ga0066710_1002344022	3300009012	Grasslands Soil	MDGSEQPRQEKYVETARDRRIANALLLFFVIVVVGGGIWLA
Ga0099830_105393131	3300009088	Vadose Zone Soil	MDEPKSPKQDEYVESERDRRIANAVLLVFFIVVVGAGIWLANAMLDQRKLDD
Ga0105247_104409881	3300009101	Switchgrass Rhizosphere	MSEQTGPDKYVETPRDRRIANAVLLLFLVLIVGGGIW
Ga0075423_104648441	3300009162	Populus Rhizosphere	MDGSEQPRQEKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQ
Ga0126380_108899931	3300010043	Tropical Forest Soil	MDDPEQPRQDKYVETARDRRIANAVLLFFLIVVVGGGIWLANAMFEQRRLDDCLAQ
Ga0126384_119583741	3300010046	Tropical Forest Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLIVVVGG
Ga0126373_110477972	3300010048	Tropical Forest Soil	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFE
Ga0126370_107462481	3300010358	Tropical Forest Soil	MDEPETPKDDKYVETARDRRIANAVLLFFLIVVVGG
Ga0126376_108215782	3300010359	Tropical Forest Soil	MDEPETPKDDKYVETARDRRIANAVLLFFLIVVVGGGIWLANAMFEQRRLDDC
Ga0126372_127883652	3300010360	Tropical Forest Soil	MNEPEPANGDKYVETARERRIANVVLLLFLVLIVGG
Ga0126372_129461862	3300010360	Tropical Forest Soil	MDEPEAPKGDNYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQLD
Ga0126378_106518581	3300010361	Tropical Forest Soil	MDEPETPKDDKYVETARDRRIANAVLLFFLIVVVGGGIWLANAMFEQRRLDDCLAQGG
Ga0126379_135032782	3300010366	Tropical Forest Soil	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQR
Ga0126383_113138721	3300010398	Tropical Forest Soil	LSGYDRAVIEPEQPQQDKYVETARDRRIANALLLFFLIVVVGGGIWLANAM
Ga0134121_107887572	3300010401	Terrestrial Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLANAMFDQRALD
Ga0137391_111814222	3300011270	Vadose Zone Soil	MDNLEESKEEKYVETARERRIANAVLLFFLLVVVGGGIWLANAIFEQHRLDDYIALGRRN
Ga0137376_101366671	3300012208	Vadose Zone Soil	MNEPEPSNGDRYVETARERRIANAVLLLFLVLIVGGGI
Ga0137379_111230012	3300012209	Vadose Zone Soil	MDDPGQPNDDKYVETARERRIANALLLFFLILVVGGGIWLANAMFE
Ga0137386_102629891	3300012351	Vadose Zone Soil	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRRLDDCMAQ
Ga0137375_100881171	3300012360	Vadose Zone Soil	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVG
Ga0162652_1000594931	3300012941	Soil	LTGYDRAVNEPEQPNGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRR
Ga0126369_117728772	3300012971	Tropical Forest Soil	MDEPEAPRGDKYVETARDRRIANAILLFFLIVVVGGGIWLANAMFEQ
Ga0164309_102447901	3300012984	Soil	MIRSMSEPGPDKYVETPRDRWVANAVLLFFLLLVVGGGIWLANAMFEQRALDD
Ga0164308_107967922	3300012985	Soil	MIRSMSEPGPDKYVETPRDRWVANAVLLFFLLLVVGGGIWLANA
Ga0157372_105949771	3300013307	Corn Rhizosphere	VETPRDRRIANAVLLLFLVLIVGGGIWLAHAMFDQRALDNCMAQ
Ga0132255_1058989591	3300015374	Arabidopsis Rhizosphere	MNEQEPLRPDDYVETPRDRRIANAVLLFFLILVVGGGIWLANAMFEQRALDNC
Ga0182032_106113382	3300016357	Soil	MDEPEQPQEDKYVETARDRRIANALILFFLVLVVGGGIWLAN
Ga0182040_105522561	3300016387	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQLDDCLAQG
Ga0190274_110135302	3300018476	Soil	MNEQEPLRPDDYVETPRDRRIANAVLLLFLVLIVGGGIWLANAMFDQRALDNC
Ga0173482_100627921	3300019361	Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLANAM
Ga0193705_10098323	3300019869	Soil	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGG
Ga0193731_10033174	3300020001	Soil	MMRRMSEQPGPDRYVETARDRRIANAVLLLFLVLIVGGGIWLANAMFDQRALDDCM
Ga0193696_10040711	3300020016	Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLA
Ga0193719_100654211	3300021344	Soil	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIV
Ga0210387_114711541	3300021405	Soil	MNEPEQRKEDRYVETARDRRIANALLLFFVIVVVGG
Ga0126371_137167341	3300021560	Tropical Forest Soil	MDEPEAPKGDKYVETARDRRIANALLLFFLIVVVGGGIWLANAMF
Ga0222623_100284281	3300022694	Groundwater Sediment	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWLANAMFD
Ga0222623_103546941	3300022694	Groundwater Sediment	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWLANA
Ga0207692_101370811	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MNEPEPSNGDRYVETARERRIANAVLLLFLVLIVGG
Ga0207692_101466632	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGI
Ga0207686_117766161	3300025934	Miscanthus Rhizosphere	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVVGGIWLANAMFDQRALDNCMAQ
Ga0257176_10260161	3300026361	Soil	MNEPEQRKEDRYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQLDDC
Ga0257161_10780592	3300026508	Soil	MNEPEAHKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAM
Ga0209056_104994222	3300026538	Soil	MDGSEQPRQEKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRLLD
Ga0208988_10292731	3300027633	Forest Soil	MIARMSEQPGPDKYVETARDRWIANAVLLFFLVLI
Ga0209180_105953622	3300027846	Vadose Zone Soil	MDDPTSPTPGERKPDDYVESDRDRRIANAVLLIFILVLVGGGIWL
Ga0137415_109659911	3300028536	Vadose Zone Soil	MDEPNATGPEKYIETPRDRRVANIILLLILAAVVGGGIWLANAMFEQRALD
Ga0307309_101343783	3300028714	Soil	MSEQPGPDKYVETPRDRRIANAVLLLLMILIVGGG
Ga0307301_100338481	3300028719	Soil	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWL
Ga0307317_101400441	3300028720	Soil	MSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWLANAMFDQRALD
Ga0307318_103168071	3300028744	Soil	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWLA
Ga0307288_100194472	3300028778	Soil	MMRRMSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGI
Ga0307306_101200072	3300028782	Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLANAMFDQRAL
Ga0307281_103361791	3300028803	Soil	MSEQPGPDKYVETARDRRIANAVLLLFLVLIVGGGIWLANAMFDQR
Ga0307302_101536092	3300028814	Soil	LTGYDRAVNEPEQPNGDKYVETARDRRIANALLLFFLIVVVGGGIW
Ga0307310_104998072	3300028824	Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWL
Ga0170824_1041154811	3300031231	Forest Soil	MSEQPGPDKYVETPRDRRIANAVLLLFLVLIVGGGIWLANAMFDQRALDN
Ga0318538_103801872	3300031546	Soil	MDEPEQPQEDKYVETARDRRIANALILFFLVLVVGGGIWLANALFEQRR
Ga0318572_106992111	3300031681	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQ
Ga0318496_103235762	3300031713	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQLDD
Ga0318501_105296842	3300031736	Soil	MDEPEQPQEDKYVETARDRRIANALILFFLVLVVGGGIWLANAL
Ga0318537_101295012	3300031763	Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLVVVVGGGIW
Ga0318521_103159761	3300031770	Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLVVVVGGGIWLANAMFEQRRLDDCLAQ
Ga0318521_105193162	3300031770	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQLDD
Ga0318546_101672362	3300031771	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQRQLDDCLALGGRY
Ga0318498_102888841	3300031778	Soil	MDDPEQPGQDKYVETARDRRIANALLLFFLVVVVGGGIWLANAMFE
Ga0318498_105331132	3300031778	Soil	MDQPQPPRPDEYRETPRDRRIANLVLLVLLVILVGGGIWLANAMFE
Ga0318498_105377681	3300031778	Soil	MDEPEQPQEDKYVETARDRRIANALILFFLVLVVGGGIWLANALFEQRRL
Ga0318566_106031972	3300031779	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIW
Ga0318552_103834462	3300031782	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQLDDCLAQGGR
Ga0318529_104564731	3300031792	Soil	MDQPQPPRPDEYRETPRDRRIANLVLLVLLVILVGGGIWLANA
Ga0318576_100704232	3300031796	Soil	MDEPEAPKGDNYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQLDDCL
Ga0318511_100654462	3300031845	Soil	MDDPEQPRQDKYVETARDRRIANALLLFFLVVVVG
Ga0318527_103053612	3300031859	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLA
Ga0318536_102348132	3300031893	Soil	MDPRQDEYVETARDRRIANALLLFFLVVVVGGGIWLANAMFEQR
Ga0318522_100343132	3300031894	Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLVVVVGGGIWLANA
Ga0310913_111284201	3300031945	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLANAMFEQ
Ga0306922_105737211	3300032001	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQ
Ga0318507_101610172	3300032025	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQLDDCLAQG
Ga0310911_102701412	3300032035	Soil	MDGSEQPKQEKYVETARDRRIANALLLFFLIVVVGGGIWLANAMFEQRQLDDCL
Ga0318549_102182531	3300032041	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWLA
Ga0318505_100482591	3300032060	Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLVVVVGGGIWLANAMFEQRQLDD
Ga0318513_100966272	3300032065	Soil	MDEPEAPRGDKYVETARDRRIANAVLLFFLIVVVGGGIWLANAMFEQ
Ga0318513_104022132	3300032065	Soil	MDQPQPPRPDEYRETPRDRRIANLVLLVLLVILVGGGIWLANAMFEQRMLDDCVA
Ga0318524_107001482	3300032067	Soil	MDEPEAPKGDKYVETARDRRIANALLLFFVIVVVGGGIWL
Ga0306924_100974553	3300032076	Soil	MDDPEQPRQDKYVETARDRRIANALLLFFLVVVVGGGIWLA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084373

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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