Metagenome Family F084406

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Overview

Basic Information
Family ID	F084406
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	52 residues
Representative Sequence	MLTNMEPPPAEGNFCDDSNHPVKPHIVEQYNRHMGYVDNSDHMANSYSMS
Number of Associated Samples	32
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.00 %
% of genes near scaffold ends (potentially truncated)	2.68 %
% of genes from short scaffolds (< 2000 bps)	0.89 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.536 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (97.321 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.05% β-sheet: 0.00% Coil/Unstructured: 67.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13843	DDE_Tnp_1_7	60.71
PF00075	RNase_H	0.89
PF01359	Transposase_1	0.89
PF00078	RVT_1	0.89
PF00005	ABC_tran	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
All Organisms	root	All Organisms	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
cellular organisms	root	All Organisms → cellular organisms	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.68 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.68 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.68 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.68 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.68 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.68 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.68 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.68 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.68 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.68 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.68 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.68 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	2.68 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Malvales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales	2.68 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Malvaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae	2.68 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Sterculioideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae	2.68 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Pterygota	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae → Pterygota	2.68 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005201\|Ga0072941_1144447	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	5068	Open in IMG/M
3300009784\|Ga0123357_10100045	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae → Pterygota	3742	Open in IMG/M
3300010162\|Ga0131853_10002168	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	35238	Open in IMG/M
3300010162\|Ga0131853_10399829	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae → Pterygota	1324	Open in IMG/M
3300027891\|Ga0209628_10051463	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae → Pterygota	3979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	99.11%
Insecta	Host-Associated → Insecta	0.89%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	99.11%
Digestive System	Host-Associated → Insecta → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	99.11%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	97.32%
Proctodeal Segment	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment	1.79%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	97.32%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut	1.79%
Termite Gut	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001542	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C	Host-Associated	Open in IMG/M
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300002450	Cornitermes sp. P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191 P3	Host-Associated	Open in IMG/M
3300002462	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4	Host-Associated	Open in IMG/M
3300002469	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated	Open in IMG/M
3300002501	Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1	Host-Associated	Open in IMG/M
3300002504	Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4	Host-Associated	Open in IMG/M
3300002507	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1	Host-Associated	Open in IMG/M
3300002508	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1	Host-Associated	Open in IMG/M
3300002509	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4	Host-Associated	Open in IMG/M
3300002552	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1	Host-Associated	Open in IMG/M
3300002834	Cornitermes sp. P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P4	Host-Associated	Open in IMG/M
3300005201	Microcerotermes gut microbial communities from Indooroopilly, Australia - IN01 metagenome	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300006226	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010167	Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3	Host-Associated	Open in IMG/M
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027864	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20167J15610_100981551	3300001542	Termite Gut	MLTNMDPPPAEGNFCDHSNRPVKPHIVERYKWHMGFVDNSDRMANSYSMDRRNLKWTT
JGI20163J15578_101234414	3300001544	Termite Gut	MLTNTDPSPAEGNFCDNSNSPVKPHIMEWYNQHMVYVDSSDCMANSYSMSQRTFNRTLNCFSTFWI*
JGI20163J15578_103234443	3300001544	Termite Gut	MLTNIDPPPAEGNFCDDSNRPVKPHIVERYNRHMGFVDISDRMANSYSMN*
JGI20163J15578_105899961	3300001544	Termite Gut	MLTNMDPPPAEQNFCDDNCPLKPHIVEWYNWHMGHADNSDLMANSYSTSQRNFKWTTNL
JGI20163J15578_107267792	3300001544	Termite Gut	MDPPPAEGNFCYDSNSPMKPDIVERYNCHMGYVDNSDRMA
JGI20163J15578_108072981	3300001544	Termite Gut	MLTNMEPPPAEGNFCDDSNCPMKPHIVERYNQNMGFVDISDCMANSYSMSRCNFKWTTKL
JGI20165J26630_100969821	3300002125	Termite Gut	MLTNMEPPPAEGNFCDDSNCPMKPHIVERYNQNMGFVDISDCMANSYSMSRCNFK
JGI20165J26630_107873061	3300002125	Termite Gut	MLTNMDPPPEEGNFCDENNHPVKPHIVEWYNRHMGYVDNSDRMATSYSM
JGI20166J26741_101992606	3300002175	Termite Gut	MLTNMDPPPAEGNFCDENNRPVKPHIMEQYNRHMGYIDNSDRMATSYSMS*
JGI20166J26741_107123942	3300002175	Termite Gut	MLTNMDPPPPHGNFCDDSNCPMKPHIVERYNRHVGYVDNSDRMANSYWMS*
JGI20163J26743_104170541	3300002185	Termite Gut	MLTNMDPTPAEGNFCDENNHPVKPHIVERYNRYMGYVDNSDCMATS
JGI20163J26743_104267772	3300002185	Termite Gut	MLTNMDPPPAEGNFCYDSNSPMKPDIVERYNCHMGYVDNSDRMA
JGI20163J26743_109307241	3300002185	Termite Gut	MLTNMDPPPAEGNFCDDSNCPVKPHIMEQYNQHMGCVDISDHMANSYSMSR
JGI20163J26743_113399613	3300002185	Termite Gut	LTNMDPPPAGNICDDSNRPVKPHIMERYYQHMGYVNNSDRMANSYSMS*
JGI20163J26743_113500784	3300002185	Termite Gut	DIPEVYMLTNMEPPPAEGNFCDDSNRPVKPHIVERYNQQMGFVDISDCMANSYSMS*
JGI20169J29049_112989723	3300002238	Termite Gut	MLTNMDPPPTEGNFCDDSNCPVRPHIMERYNCHMGYVNNSDHMANSYLMS*
JGI20169J29049_114233272	3300002238	Termite Gut	MLTNMDPPPAEGNFCDNSSHPVKPHIVEWYNQHMGYVDSSDRMANN*
JGI20169J29049_114353935	3300002238	Termite Gut	MPTIMDPPPAERNFCDDSNYPMKPHIVERYNQHMGYVDSSDCMANSYLMSRPSSRP*
JGI20171J29575_119710091	3300002308	Termite Gut	MLTNMGPPTAEGNFCDNSNHPVKPHIMEQYNQHIGYVDNSDRMAN
JGI24695J34938_103687281	3300002450	Termite Gut	MLTNMDPPPAEGNICDYSNHPVKSHIVERYNRHVDYVHNSDHMANSYLMSRRIFKWTTKLFLHHLDLT
JGI24695J34938_104574362	3300002450	Termite Gut	DPPPAQGNFFDSNHPLKPHVVEQYNQHMGYVDNSDRMANSYSMR*
JGI24702J35022_109068381	3300002462	Termite Gut	MLTNMDRPPSEGNFCEYSNCPVKPHIVERYNWHMGFVDISDRMANSYLMS*
JGI24702J35022_110611581	3300002462	Termite Gut	MLTNMDPPPAEGNFCDNSNRPVEPHIVERYNRHMGYVDNSDRMTNSYSMSQRNF
JGI24701J34945_104108071	3300002469	Termite Gut	MDPPPAEGNFCDDSNRPKKPDVVERYNWHMGYVDNSDHMANSYSMCQRT
JGI24703J35330_107286271	3300002501	Termite Gut	MLTNMEPPPEEGDFCDDSRRAVKPQIVARYNRHMGYVDISDRMANS
JGI24703J35330_107697131	3300002501	Termite Gut	MLTNMDPPPAERNFCDDSNRPVKPHIVERYNRHMGFVDISDRMANSYS
JGI24703J35330_107728892	3300002501	Termite Gut	MLTNMDLPPEEGNFCDDSKRAMKPQIMAWYNRHMGYVDISDCMANSYSMCRRTFKWTTKLFF
JGI24703J35330_108724182	3300002501	Termite Gut	MLTDMDPPPAQGNFCDASNYPVKPHIVERYNWHMGYVDISDRMANSYSMSRCTFKWTMK*
JGI24703J35330_108781752	3300002501	Termite Gut	MDPPPEEGNFCDDSKQAVKPQIVARYNRHMGYVNISDRMANSYSMCRCAFKWT
JGI24703J35330_109774462	3300002501	Termite Gut	MLTNMDPPPAERNFCDDSNRPVKPHIVERYDRHMGFIDISDHMANSYSMDRRNLKWTTKLFYNNR*
JGI24703J35330_109871132	3300002501	Termite Gut	MLTNMDLSPEEGNFCDDSKRAVKPQIVARYNRHVGYIDISDRMDNSYSMCR
JGI24703J35330_110996911	3300002501	Termite Gut	YMLTNMDLPPEEGNFCDDSKRAVKPQIVARYNQYMGYVDISDCMANSYSMCRRTFK*
JGI24703J35330_111283451	3300002501	Termite Gut	MLTNMDPPPAEGNFCDNSNRPMKPHIVERYNRHVGYVDNSDRVANSYLISQ
JGI24703J35330_112226412	3300002501	Termite Gut	MLTNMDPPPEEGNFCDDSRRAVKPQIMARYNWHMGYVDISDRMANSYSMC*
JGI24703J35330_113680332	3300002501	Termite Gut	VLVWKDRRDVYILTNMDLPPEEGNFCDDSIRAVKASNRGMDNVDISDRMANSYLMCRRTFKWTTKLFFHLLDLTL
JGI24703J35330_114819791	3300002501	Termite Gut	MLNNVDPPPAEGNFCDNSNHPMKPNIVERYNQHMGYVDNSDRMAKSYSMSR
JGI24703J35330_115287503	3300002501	Termite Gut	MLTNMDLPPEEGNFCDDSKRAVKPQIVAQYNRHMGYVDISDRMANSYSMC*
JGI24703J35330_116378724	3300002501	Termite Gut	MLTNIHDPPEEGNFCDDSGNTLKPAIVEDCNRHMGYIDKSDRMPNSRY*
JGI24703J35330_116662391	3300002501	Termite Gut	MLINMDPLPAEGNFCGNSNHPMKPNIVERYNRHMGYIDISDRMASSYSMN*
JGI24703J35330_117108533	3300002501	Termite Gut	MLTNMDLPPAEGNFCDDSKRAVNPQIVARYNVDISDLMAGQYLFDVST*
JGI24703J35330_117146572	3300002501	Termite Gut	MLTNMELPSEGNFCDDSKRGVKPQIVARYNQHMGYVDISDRMANSYSMCQRTFK*
JGI24705J35276_113721101	3300002504	Termite Gut	PPSEEGNFCDDSKRGVKPQIVARYNRHMGYFDISDHTANSYSMCRRTFKWTTKLFFHLQQLDSVIFMCG*
JGI24705J35276_114002662	3300002504	Termite Gut	MLTNMDQPPAEGNFCDNSNRPMKPHIVEWYNWHVGYIDSSNCMANGYLMSQCTFKW
JGI24705J35276_114205191	3300002504	Termite Gut	MLTNMDPPSAEGNFCDDSNCPVKPHIMERYNRHMYYIENSDSMANSYLMS*
JGI24705J35276_115806042	3300002504	Termite Gut	MDPPPAERNFCDDSNPPMKPHTVERYDQHMGFIDISDRMANSYSMDPHNLK
JGI24705J35276_115890442	3300002504	Termite Gut	MLTNVDPPPEEGNFCDDSKRAVKPQIMTQNNWHVGYVDISDHMANSYSMC*
JGI24705J35276_116492221	3300002504	Termite Gut	MLTNMDLPPEEGNFRDDSKRAMKPQIVARYNRHMCYVDISDRMANNFSMCRRTFKWTTKLFFH
JGI24705J35276_117920511	3300002504	Termite Gut	TNMDQPPAEGNFCDDSNRPVKPNIVERYIWHMGYVDNSDRMSNSYLMS*
JGI24705J35276_120485262	3300002504	Termite Gut	EVYMLTNMDPPPAEGNFCDDSNRPVKPNIMERYNRHMGYVDNSIV*
JGI24705J35276_120729023	3300002504	Termite Gut	MDPPSEEGNFCDDSKRDMKPQIVARYKRHMGYIDISDRMANRY*
JGI24705J35276_120823882	3300002504	Termite Gut	MLNNMDLPSEEGNFCEESKRAVKPQIVARYNRHMGYVNISDNMANSYS
JGI24697J35500_105902091	3300002507	Termite Gut	EVYMLTNMDPPPAEGNFCDNSNRPMKPHIVERYNRHIGYVDNSDRMANSYSMSRRTFKWTTK*
JGI24697J35500_106079063	3300002507	Termite Gut	MDPPRAEGNFCDNSLHHVKPHIMEWYNQHMGYVDSSDHMANSYSMSRPDL
JGI24697J35500_107598622	3300002507	Termite Gut	MDPSRAEGNFCDNSIQRVKPHTMKWYNQHMGYVDSSDHMANSYTMSRPDL
JGI24697J35500_109435591	3300002507	Termite Gut	MLTNMDLPPAEGNFCDDSNLPVKPHVMEWYNWHLGYVDSSDHMANSYSLS*
JGI24697J35500_111624094	3300002507	Termite Gut	MQTNMDPPRAEGNFCDNSNRVEPHIMEWYNQHMGYVDSSDHMANSYSMSRPDL*
JGI24700J35501_101824281	3300002508	Termite Gut	FCDDSNRPVKPHIMGRYNRQMGYIDSSDCMANSYSMSRHTFEWTTKLFFHFSV*
JGI24700J35501_102389691	3300002508	Termite Gut	MDSPSAEGNFCDDSNRPVKPHIVEQYNRHMGYVDNSDHMANSYSMS*
JGI24700J35501_109027836	3300002508	Termite Gut	MDTPPAEGNFCDSNRRVKPHLVERYNQDLGYVNSSDRMAKSYSMSRSSF*
JGI24700J35501_1092474513	3300002508	Termite Gut	MLTNMDPTSAEGNICDDSNRPVKPHIVERYNQHTDYVDNSDRMANI*
JGI24699J35502_104764181	3300002509	Termite Gut	MQTNMGPPRAEGNFCDNSIHRVKPHIMEWYNQHMGYVDSSDHMANSYPMSRPDL*
JGI24699J35502_105163671	3300002509	Termite Gut	MQTNMDPPRAEGNFCDNSLHHVKPHIMEWYNQHMGYVDSSDHMANSYSMSRPDL
JGI24699J35502_105185883	3300002509	Termite Gut	MDPPPAEGNFCDSNCPVKPHILERYHQDMGYIYTSDHIPNSYSIDAPSS
JGI24699J35502_105874311	3300002509	Termite Gut	YMLTNMDPPPAEGNFCDNSNRPMKPHIVERYNRHIGYVDNSDRMANSYSMSRRTFKWTTK
JGI24699J35502_106042211	3300002509	Termite Gut	MQTNMDPPRGEGNFCDNSIHRVKPHIMEWYNQHMGYVDSSDHMADSYSTSRPDL*
JGI24699J35502_106257632	3300002509	Termite Gut	MDPPPTEGNFYDNSSCPVKPHIMEQYKQHMDYVCGSDRMANNYSMSGHTFKWTTKLF
JGI24699J35502_107734861	3300002509	Termite Gut	MQTNMDPPRAEGNFCDNSNRVEPHIMEWYNQHMGYVDSSDHMANSYSMSRPDL
JGI24699J35502_111188454	3300002509	Termite Gut	MLTNMDPQPAERNFCHDSNHPVKPHIMQQYNRRMGYVDNSDHMANSYSMR*
JGI24694J35173_101201171	3300002552	Termite Gut	PPAEGNFCDNSKRPMKPHIMEQYNQHMGYVNNSDRMANSYSMS*
JGI24694J35173_101214962	3300002552	Termite Gut	MLTNMDPPPAEGNFCDDSNCPMKPHVVERYNRHMGYVDNSDCMANSYSMSRCTFKWT
JGI24694J35173_104216651	3300002552	Termite Gut	MLTDTDLPPEEGNFCDDSKQAVKPQIVAQYNWHVGYIDNSDRMANSY
JGI24694J35173_104316352	3300002552	Termite Gut	MLTNMDPPPAEGNFCDDSNLPVKPHFVEQYNWHMGYTDNSDCMANTIR*
JGI24694J35173_105108202	3300002552	Termite Gut	MLTNMDPPSAEGNFCDDSNCPTKPYIVEQYNQHMGYIDNSDCMANSYSM
JGI24696J40584_128372411	3300002834	Termite Gut	NMDPPSAEGNFCDDSNCPTKPYIVEQYNQHMGYIDNSDCMANSYSMSRCTFK*
JGI24696J40584_128574902	3300002834	Termite Gut	MLNNMDPPPAEGNFCDDINRPMKPHIVELYNWHVGYVDNSDHMANSYSMS*
Ga0072941_11444471	3300005201	Termite Gut	MRTNMDPPRAEGNFCDNSNHHVKPHFMEWYNRHMGYVDNSDRMA
Ga0082212_101321271	3300006045	Termite Gut	MLTNMDPPPAEGNFCDDSNRPVKPNIVERYNRHMGYVDNSDHMSNSYSMIRRTFKWTTKL
Ga0082212_101878031	3300006045	Termite Gut	MDPPSEEGNFCDDSKRDVKPQIVARYKRHMGYIDISDRMANRY*
Ga0082212_102160594	3300006045	Termite Gut	MLTNMDPPSKEGNFCDDSKRGVKSQIMARYNRHMGYIDISDHMANSYSKCRRTFKWTTKLFSTFWI*
Ga0082212_104357111	3300006045	Termite Gut	RAPPREEGNFCNESKRAVKPQIVAWYNWHMGYVNISDRMANSYSMQ*
Ga0082212_104398231	3300006045	Termite Gut	MLTNMDLPPAEGNFCDNSNHPVKPHIVDWYNQHKGYVDNSDCTANSYPMSRRTF
Ga0082212_105177382	3300006045	Termite Gut	MLTNMDPPPAEGNFCDNSNRPMKPHIVERYNRHVGYVDNSDRVANSYLIVNVPSSGP*
Ga0082212_108497111	3300006045	Termite Gut	MLTNMELPSEGNFCDDSKRGVKPQIVARYNQHMGYVDISDRMANSY
Ga0082212_108752722	3300006045	Termite Gut	MLAWKDRRDIYMLTNMDRPPEEGNFCDDSKRAVKPQIVARYNRHMGYVNISDRMANSYSMCRRTFKWT
Ga0082212_112651001	3300006045	Termite Gut	MDPKPAEGNFCDDSNRPVKPHIVERYNRHMGLVDISDRMANSYSMDRRNIKGTTKPFFHV
Ga0099364_100266806	3300006226	Termite Gut	MLTNIEPPPGEGNFCENSNRTMKPHIVEQYNWHRGYVNNSHHMANSYLIR*
Ga0123357_100062461	3300009784	Termite Gut	MLTNMDPTPEEGNFCDDSNHLLKPHIVEWYNQHMGYIDSSDRMAKAIR*
Ga0123357_100137744	3300009784	Termite Gut	MLTNMDPPPAEGNFCGDSNRPVKPHIIEQYNQDMDYTDNSDHMANSYFMK*
Ga0123357_101000454	3300009784	Termite Gut	MLTNMDPPPEEGNFCDDTKRAVKSQMVALYNRHMGYVDNSDHMANSYSMC*
Ga0123357_108207792	3300009784	Termite Gut	MDTPPEEGNFCGENKRAMKPQMVARSNRRMGYVDIYDRMANIYSMFRRTFKWNT
Ga0123357_108890272	3300009784	Termite Gut	MDPPPEEGNFCDESKRGVMPQIMAQYNRHMGYVDISDRMVNSYSMCR
Ga0123355_108104361	3300009826	Termite Gut	MDPPIEEGNFCGESKRAVKPQIVARYNWHMGYVEISDQM
Ga0123356_126193932	3300010049	Termite Gut	MDPPPEEGNFFDDSKRAMKPQIVARYNWHVGYVDISDRMANSYSMCR
Ga0131853_1000216819	3300010162	Termite Gut	MLTNMEPPPAEGNFCDDSNHPVKPHIVEQYNRHMGYVDNSDHMANSYSMS*
Ga0131853_100039452	3300010162	Termite Gut	MLTNMDPPPGEGNFCDDSNHPVKRHITEQYNRLMGYVDNSDHMADSYWMS*
Ga0131853_103998293	3300010162	Termite Gut	MDPPPEEGNFCDGNKRAVKPQIVARYNRYMVYVDISDRMAN
Ga0123353_100232118	3300010167	Termite Gut	MDPPPEEGNFFDDRKAMKPQIMARYNRHMGYVDISD
Ga0123353_100348641	3300010167	Termite Gut	EGNFCDDSKRAVKPQIVARYNQHMGYVDNSDHMAKSYSMC*
Ga0209531_100902221	3300027558	Termite Gut	MLTNMHSPPAEGNFSDDSNQPVKPYIMEQYNWRMCYVDNSDCMANSFSI
Ga0209531_102984751	3300027558	Termite Gut	MKSLQANVDPPPPAAEGNFCDDINCTMKLHIVEWYNRHIEYVDNSDHMANSYSISS
Ga0209423_105863411	3300027670	Termite Gut	MDPQPAEGNFCDDSNHPVKSHIMEQYNWHMGNVDSSYRMANSYVMSXSTFKWTTKLFFH
Ga0209755_100156051	3300027864	Termite Gut	PPPEEGNFCDDSKRAVKPQIVARNNRHMGYVDNSDGMVNSYSMCRCNFK
Ga0209755_100386904	3300027864	Termite Gut	MLTNMDPPPAEGNFCDDSNLPVKPHFVEQYNWHMGYTDNSDCMANTIR
Ga0209755_100655694	3300027864	Termite Gut	MLTNMDLPPVEGNFCDVNTCSVKHHIVERYNWHMDYFDISDCMAKSYSVS
Ga0209755_104168213	3300027864	Termite Gut	MNNMDPPPDGNFCDDSKRHVTPHIVERYNQQMGYVNNSNLIANSYSKSCCNFYW
Ga0209628_1000937310	3300027891	Termite Gut	MLTNMDPPSAERNFCDDSNCPVKPHIMEWYNWHMGYVDSSDHMANSYSMSQCTFTWTMKLFFHLPDLTVKLGY
Ga0209628_100514636	3300027891	Termite Gut	MDPTPAEGNFCDDSNCPVKPHIVERYNQHMGFVDLSDRMANSYSM
Ga0209628_100826121	3300027891	Termite Gut	MLTNMDPPPPHGNFCDDSNCPMKPHIVERYNRHVGYVDNSDRMANSYWMS
Ga0209737_105911583	3300027904	Termite Gut	MDPPPAEGNLCDDSNRPMKPDIEERYNRHMGYVDNSDLMANSYSMCRRTFKWTTKLFFHL
Ga0209738_102272613	3300027966	Termite Gut	MLTNVDPPPAEGNFCDGSNCPVKSHIMEQYNWHVGYFNSSDCMASSYSMGRCTFKWTMKLFFHLLDL
Ga0209629_100070976	3300027984	Termite Gut	MLTNIDPPPAEGNFCDDSNRPVKPHIVERYNRHMGFVDISDRMANSYSMN
Ga0209629_104014634	3300027984	Termite Gut	MLTNMDPPPAEGNFCDDSNRPVKPHIVERYNQHMGFVNISDHMAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084406

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences