Metagenome / Metatranscriptome Family F084500

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084500
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	76 residues
Representative Sequence	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Number of Associated Samples	83
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.47 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.321 % of family members)
Environment Ontology (ENVO)	Unclassified (20.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.76% β-sheet: 0.00% Coil/Unstructured: 35.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF10459	Peptidase_S46	55.36
PF02321	OEP	6.25
PF02738	MoCoBD_1	2.68
PF13620	CarboxypepD_reg	0.89
PF07055	Eno-Rase_FAD_bd	0.89
PF05050	Methyltransf_21	0.89
PF16870	OxoGdeHyase_C	0.89
PF13533	Biotin_lipoyl_2	0.89
PF13964	Kelch_6	0.89
PF16576	HlyD_D23	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	12.50
COG3007	Trans-2-enoyl-CoA reductase	Lipid transport and metabolism [I]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.46 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	63.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.29 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.29 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.39 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.29 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.39 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.39 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Unclassified	root	N/A	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004139\|Ga0058897_11171375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1989	Open in IMG/M
3300004631\|Ga0058899_12213195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005167\|Ga0066672_10639617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300005174\|Ga0066680_10325106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300005174\|Ga0066680_10780669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005177\|Ga0066690_10001338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9164	Open in IMG/M
3300005439\|Ga0070711_101624631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300005454\|Ga0066687_10275028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300005529\|Ga0070741_10000189	All Organisms → cellular organisms → Bacteria	230580	Open in IMG/M
3300005532\|Ga0070739_10035348	All Organisms → cellular organisms → Bacteria	3567	Open in IMG/M
3300005534\|Ga0070735_10055841	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300005534\|Ga0070735_10243784	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005537\|Ga0070730_10121840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1788	Open in IMG/M
3300005538\|Ga0070731_10165349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1469	Open in IMG/M
3300005542\|Ga0070732_11044875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005557\|Ga0066704_10010136	All Organisms → cellular organisms → Bacteria	5164	Open in IMG/M
3300005559\|Ga0066700_10110859	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300005568\|Ga0066703_10516064	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005568\|Ga0066703_10885138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005586\|Ga0066691_10115185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1522	Open in IMG/M
3300005586\|Ga0066691_10153344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300005602\|Ga0070762_10897483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005921\|Ga0070766_10107257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1663	Open in IMG/M
3300006176\|Ga0070765_100426840	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300006176\|Ga0070765_101478531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006755\|Ga0079222_10006182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4044	Open in IMG/M
3300006794\|Ga0066658_10052329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300006797\|Ga0066659_10008410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5391	Open in IMG/M
3300006800\|Ga0066660_10673833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300006804\|Ga0079221_10157554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1196	Open in IMG/M
3300009038\|Ga0099829_10774528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300010376\|Ga0126381_101066850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300011120\|Ga0150983_11380687	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300011120\|Ga0150983_11522798	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300011120\|Ga0150983_12720596	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300011120\|Ga0150983_16174386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300016422\|Ga0182039_12238470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017822\|Ga0187802_10202434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300017927\|Ga0187824_10225102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300017930\|Ga0187825_10010147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3149	Open in IMG/M
3300017933\|Ga0187801_10481126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300017936\|Ga0187821_10011513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3029	Open in IMG/M
3300017936\|Ga0187821_10137847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300017943\|Ga0187819_10311337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300017970\|Ga0187783_11205381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300017972\|Ga0187781_10334518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300017993\|Ga0187823_10149615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300017995\|Ga0187816_10364380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300018006\|Ga0187804_10437183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300018006\|Ga0187804_10490695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300018007\|Ga0187805_10238748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300018012\|Ga0187810_10302517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300018058\|Ga0187766_10249464	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300020579\|Ga0210407_10049686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3130	Open in IMG/M
3300020579\|Ga0210407_10258170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300020582\|Ga0210395_11150762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300020583\|Ga0210401_10029640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5213	Open in IMG/M
3300021046\|Ga0215015_10412005	All Organisms → cellular organisms → Bacteria → Acidobacteria	7549	Open in IMG/M
3300021046\|Ga0215015_10542065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300021088\|Ga0210404_10010905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3728	Open in IMG/M
3300021171\|Ga0210405_10013141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6898	Open in IMG/M
3300021171\|Ga0210405_10077311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2623	Open in IMG/M
3300021171\|Ga0210405_10248328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300021171\|Ga0210405_10326483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300021171\|Ga0210405_10393310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300021171\|Ga0210405_10645656	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300021178\|Ga0210408_10807169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300021404\|Ga0210389_11146827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300021406\|Ga0210386_11298046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300021420\|Ga0210394_10005093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14890	Open in IMG/M
3300021420\|Ga0210394_10022187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5845	Open in IMG/M
3300021420\|Ga0210394_10161857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1946	Open in IMG/M
3300021432\|Ga0210384_10452382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300021432\|Ga0210384_10780108	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300021474\|Ga0210390_10248786	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300021476\|Ga0187846_10038542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2140	Open in IMG/M
3300021559\|Ga0210409_10631591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300021559\|Ga0210409_11309117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300022531\|Ga0242660_1239245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300022722\|Ga0242657_1220626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300026317\|Ga0209154_1103601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300026335\|Ga0209804_1013260	All Organisms → cellular organisms → Bacteria → Acidobacteria	4421	Open in IMG/M
3300026529\|Ga0209806_1187772	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300026532\|Ga0209160_1000677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28344	Open in IMG/M
3300026552\|Ga0209577_10188827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1591	Open in IMG/M
3300027537\|Ga0209419_1103381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027565\|Ga0209219_1010260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2156	Open in IMG/M
3300027660\|Ga0209736_1131477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300027706\|Ga0209581_1008048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7259	Open in IMG/M
3300027725\|Ga0209178_1003885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4723	Open in IMG/M
3300027765\|Ga0209073_10065304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300027775\|Ga0209177_10299310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027905\|Ga0209415_10349208	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300028906\|Ga0308309_10598167	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300029636\|Ga0222749_10259988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300031231\|Ga0170824_112526417	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031720\|Ga0307469_10147465	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300031720\|Ga0307469_10739991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300031754\|Ga0307475_10114467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2117	Open in IMG/M
3300031823\|Ga0307478_11652895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300032160\|Ga0311301_13013220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032180\|Ga0307471_100067900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3057	Open in IMG/M
3300032180\|Ga0307471_100971001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300032180\|Ga0307471_101874765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300032180\|Ga0307471_103864474	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300032261\|Ga0306920_104462750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300032770\|Ga0335085_10000021	All Organisms → cellular organisms → Bacteria	588913	Open in IMG/M
3300032770\|Ga0335085_11134935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300032783\|Ga0335079_10463309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300032783\|Ga0335079_10567057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300032783\|Ga0335079_11060748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Aquatic	Environmental → Aquatic	11.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Freshwater	Environmental → Aquatic → Freshwater	11.61%
Cave	Environmental → Terrestrial → Cave	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.96%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058897_111713751	3300004139	Forest Soil	VLEAKLNKQSWLVWRSRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD*
Ga0058899_122131951	3300004631	Forest Soil	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD*
Ga0066672_106396172	3300005167	Soil	LNKRWWLVWRNRLTFILPVAGGLVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED*
Ga0066680_103251061	3300005174	Soil	MLNKQWWPVWRSRLTFILPAVGGLIAAAVGLRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGDED*
Ga0066680_107806691	3300005174	Soil	VWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKT
Ga0066690_100013387	3300005177	Soil	LEAKLNKQWWPVWRNRLTFILPVAGGMVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED*
Ga0070711_1016246311	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LNRQAWLIWKNRLTLILPVTLGVVAAVVGIRMLVLRNFSDSSWEFMGRCGADALGFFLVACLGWLQNREELDRENLD*
Ga0066687_102750282	3300005454	Soil	LNKQSWLVWKDRLTFILPVAGGTIAAAVGIRMLVITNFSNSGWEFMGRCGADALGFFLVAGICWLKRHPEVGDEE*
Ga0070741_10000189133	3300005529	Surface Soil	LNSQWWNVWKSWLSFILPLTGGLIAAGVGFRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDSED*
Ga0070739_100353483	3300005532	Surface Soil	VWKSWLSFILPLTGGLIAAGVGFRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDSED*
Ga0070735_100558412	3300005534	Surface Soil	VNKQVWLVWRNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH*
Ga0070735_102437842	3300005534	Surface Soil	ILPVVGGLVAAAVGVRMLILTGFSESGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQ*
Ga0070730_101218402	3300005537	Surface Soil	LNKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD*
Ga0070731_101653492	3300005538	Surface Soil	LEAKLNNQSWTVWRDRLTFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD*
Ga0070732_110448751	3300005542	Surface Soil	LNKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD*
Ga0066704_100101362	3300005557	Soil	VWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDRED*
Ga0066700_101108592	3300005559	Soil	LNKRWWLVWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD*
Ga0066703_105160641	3300005568	Soil	TFILPVAGGLVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED*
Ga0066703_108851381	3300005568	Soil	QFLEAKLNKQWWTVWKDRLTFILPVAGGLIAAAVGIRMLVLTNFSDSGWEFMGRCGADALGFFLVAGICWLKRHPELGDEE*
Ga0066703_109101131	3300005568	Soil	ILPAVGGLIAAAVGLRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGDED
Ga0066691_101151851	3300005586	Soil	KLNKRWWLVWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD*
Ga0066691_101533442	3300005586	Soil	VLLFSFLDSGEAKLNRRWWLVWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDRED*
Ga0070762_108974831	3300005602	Soil	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADSLGFFLVAGICWVKAHPELDSQDQD*
Ga0070766_101072572	3300005921	Soil	LNNQSWTVWRDRLTFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD*
Ga0070765_1004268402	3300006176	Soil	MLEAKLNNQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD*
Ga0070765_1014785312	3300006176	Soil	VWRDRLTFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD*
Ga0079222_100061822	3300006755	Agricultural Soil	LDKQWWRVWRNRLTFILPILGGLLAATVGVRMLILTDFSDSGWEFMGRCGADALGFFLVAGICWLKAHPELDSEDQE*
Ga0066658_100523293	3300006794	Soil	MLNKQWWPVWRSRLTFILPAVGGLIAAAVGLRMLILTDFSESGWEFMGRCGADALGFFLVAGIC
Ga0066659_100084101	3300006797	Soil	LNKQWWPVWRNRLTFILPVAGGMVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED*
Ga0066660_106738332	3300006800	Soil	VWKDRLTFILPVAGGTIAAAVGIRMLVITNFSNSGWEFMGRCGADALGFFLVAGICWLKRHPEVGDEE*
Ga0079221_101575543	3300006804	Agricultural Soil	LNKQWWIVWKDRLMFILPVAGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADALGFFLVAGICWLKRHPELGDED*
Ga0099829_107745282	3300009038	Vadose Zone Soil	LEAKLDKWLVWKNRLTFILPLAGGLTAAAVGIRMLILTNFSNSGWEFMGRCGADALGFFLVAGICWLKKHPELGSED*
Ga0126381_1010668502	3300010376	Tropical Forest Soil	VWKYWLSFILPLTAGFIATGVGFRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLRTHPELDSED*
Ga0150983_113806872	3300011120	Forest Soil	FILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD*
Ga0150983_115227981	3300011120	Forest Soil	QWWSVWRNRLTFILPVLGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWFKAHPELDSEDQD*
Ga0150983_127205961	3300011120	Forest Soil	IWKNRLMLILPVLGGLVAAVVGIRMLILQDFSDSSWEFMGRCGADALGFFLVAGLGWLQTRDEFDRGNSD*
Ga0150983_161743862	3300011120	Forest Soil	EAKLNKQLWLVWRNRLTFILPIAGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD*
Ga0182039_122384701	3300016422	Soil	ISNSLEAKLNKQWWPVWRDRLTFVLPAIGGLIAAAVGIRMLLLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELGDED
Ga0187802_102024342	3300017822	Freshwater Sediment	VNKQVWHVWRNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH
Ga0187824_102251021	3300017927	Freshwater Sediment	VNKQVWRVWRSWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPELGPEDEDSR
Ga0187825_100101472	3300017930	Freshwater Sediment	LNKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADSLGFFLVAGICWLKVHPELDSSQDQD
Ga0187801_104811262	3300017933	Freshwater Sediment	RNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH
Ga0187821_100115132	3300017936	Freshwater Sediment	LKLNNQWWPVWRNRLTFILPVAGGLVAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKAHPELDREDQD
Ga0187821_101378472	3300017936	Freshwater Sediment	LNKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0187819_103113372	3300017943	Freshwater Sediment	VNKQVWRVWRNWLSVILPMVGGFVASAVGFRMLILTDFSNSGWEFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH
Ga0187783_112053812	3300017970	Tropical Peatland	VNKERWLAYRNWLSFVLPLIGGLVAGAVGVRMLILTNFSDSGWEFMGRCGADALGFFVVAGICWLKAHPEELGREDGD
Ga0187781_103345182	3300017972	Tropical Peatland	VNKERWLACRNWLSFVLPLIGGLVAAAVGLRMLILTDFSDSGWEFMGRCGADALGFFVVAGICWFKAHPEELGREDGD
Ga0187823_101496151	3300017993	Freshwater Sediment	VNKQVWRVWRSWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPELGPEDEDGR
Ga0187816_103643801	3300017995	Freshwater Sediment	VDKQVWRVWKTSLSVILPMVGGFIAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFLVAGICWLKLHPELGPEDEDSH
Ga0187804_104371831	3300018006	Freshwater Sediment	VNKQVWHVWRNWLSVILPMVGGSVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCW
Ga0187804_104906952	3300018006	Freshwater Sediment	LNNQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0187805_102387482	3300018007	Freshwater Sediment	VNKQVWLVWRNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH
Ga0187810_103025172	3300018012	Freshwater Sediment	VDKQVWRVWKTWLSVILPMVGGFIAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFLVAGICWLKLHPELGPEDEDSH
Ga0187766_102494642	3300018058	Tropical Peatland	VNKQAWRVWWNWLSVILPMVGGLVAAAVGIRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPELGAEDEDSR
Ga0210407_100496862	3300020579	Soil	LNKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0210407_102581702	3300020579	Soil	LNKQSWLVWRSRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210395_111507622	3300020582	Soil	SSGAKLNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210401_100296404	3300020583	Soil	LNKQSWLAWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0215015_104120057	3300021046	Soil	LNKQGWPVWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPALDRED
Ga0215015_105420652	3300021046	Soil	LDKRWWFVWRTRLTVILPVLGGLLATAVGIRMLILTDFSDSGWAFMGRCGADALGFFLVAGICWLKAHPELHSEDQD
Ga0210404_100109051	3300021088	Soil	LNKQSWLVWRSRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICW
Ga0210405_100131414	3300021171	Soil	LDKQWWSVWRNRLTFILPVLGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWFKAHPELDSEDQD
Ga0210405_100773112	3300021171	Soil	LNNQSWTVWRDRLTFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD
Ga0210405_102483281	3300021171	Soil	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADSLGFFLVAGICWVKAHPELDSQDQD
Ga0210405_103264832	3300021171	Soil	LNKQLWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210405_103933102	3300021171	Soil	VNKQVWRVWRNWLSVILPTVGGFIAAAVGFRMLILTDFSNSGWEFMGRCGADALGFFFVAGICWLKLHPELGPEDEDSH
Ga0210405_106456562	3300021171	Soil	RLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210408_108071691	3300021178	Soil	AKLNKQSWLVWRSRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210389_111468271	3300021404	Soil	LNKQSWLAWRNRLTFILPIAGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWL
Ga0210386_112980461	3300021406	Soil	LNKQSWLAWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELD
Ga0210394_100050934	3300021420	Soil	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0210394_100221875	3300021420	Soil	LNKQSWLVWRNRLTFILPISGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0210394_101618572	3300021420	Soil	LNNQSWTVWRDRLAFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD
Ga0210384_104523822	3300021432	Soil	LDKQWWSVWRNRLTFILPVLGGLIAAVVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWFKAHPELDSEDQD
Ga0210384_107801082	3300021432	Soil	NKQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0210390_102487862	3300021474	Soil	VNKQVWRVWRNWLGVILPMVGGFVAAAVGFRMLILTDFSNSGWEFMGRCGADALGFFFVAGICWLKLHPELGPEDEDSH
Ga0187846_100385422	3300021476	Biofilm	LNKQWWTVWKDRLTFILPVAGGLIAAAVGIRMLVLTDFSDSGWEFMGRCGADALGFFLVAGICWLKRHPELGDED
Ga0210409_106315911	3300021559	Soil	LNKQWWPVWRDRLTFILPVAGGLIAATVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD
Ga0210409_113091171	3300021559	Soil	TIAAPFSFPDFLEAKLDKQWWSVWRNRLTFILPVLGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWFKAHPELDSEDQD
Ga0242660_12392451	3300022531	Soil	KQSWLVWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0242657_12206262	3300022722	Soil	KLNKQSWLAWRNRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0209154_11036012	3300026317	Soil	LEAKLNKRWWLVWRNRLTFILPVAGGLVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED
Ga0209804_10132602	3300026335	Soil	LNKQWWPVWRNRLTFILPVAGGMVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED
Ga0209806_11877721	3300026529	Soil	WWLVWRNRLTFILPVAGGLVAAAVGIRMLILTDFSESGWEFMGRCGADALGFFLVAGICWLKTHPELGGED
Ga0209160_10006776	3300026532	Soil	LNRRWWLVWRDRLTFILPVAGGLVAAAVGIRMLVLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDRED
Ga0209577_101888272	3300026552	Soil	LEAKLNKQSWLVWKDRLTFILPVAGGTIAAAVGIRMLVITNFSNSGWEFMGRCGADALGFFLVAGICWLKRHPEVGDEE
Ga0209419_11033812	3300027537	Forest Soil	LNKQLWLVWRNRLTFILPIAGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWVKAHPELDSQDQD
Ga0209219_10102602	3300027565	Forest Soil	LNNQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNCSNSGWEFMGRCGADSLGFFLVAGICWVKAHPELDSSHDQD
Ga0209736_11314771	3300027660	Forest Soil	LNNQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSHDQD
Ga0209581_10080484	3300027706	Surface Soil	LNSQWWNVWKSWLSFILPLTGGLIAAGVGFRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDSED
Ga0209178_10038852	3300027725	Agricultural Soil	LDKQWWRVWRNRLTFILPILGGLLAATVGVRMLILTDFSDSGWEFMGRCGADALGFFLVAGICWLKAHPELDSEDQE
Ga0209073_100653042	3300027765	Agricultural Soil	LNKQWWIVWKDRLMFILPVAGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADALGFFLVAGICWLKRHPELGDED
Ga0209177_102993102	3300027775	Agricultural Soil	LDKQWWRVWRNRLTFILPILGGLLAATVGVRMLILTDFSDSGWEFMGRCGADALGFFLVAGICWLK
Ga0209415_103492082	3300027905	Peatlands Soil	VNKQVWRVWRNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGVCWLKLHPELGPEDEDSH
Ga0308309_105981672	3300028906	Soil	MLEAKLNNQSWLVWRNRLTFILPITGGLIAAAVGIRMLILTNFSNSGWEFMGRCGADSLGFFLVAGICWLKAHPELDSSQDQD
Ga0222749_102599882	3300029636	Soil	LEAKLNKQWWPVWRDRLTFILPVAGGLIAATVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD
Ga0170824_1125264171	3300031231	Forest Soil	LILPVIGGLVAAVVGIRMLILQDFSDSSWEFMGRCGADALGFFLVAGLGWLQTRDEFDRGNSD
Ga0307469_101474652	3300031720	Hardwood Forest Soil	LEAKLNKQWWPVWRDRLTFILPVAGGLVAATVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELDREDQD
Ga0307469_107399912	3300031720	Hardwood Forest Soil	LNKQSWLVWRNRLTFILPIAGGLIAAAVGIRMLIVTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0307475_101144671	3300031754	Hardwood Forest Soil	LNKQLWLVWRTRLTFILPIAGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWVKAHPELDSQDQD
Ga0307478_116528951	3300031823	Hardwood Forest Soil	VWRDRLTFILPMAGGLLAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKTHPELDRED
Ga0311301_130132201	3300032160	Peatlands Soil	AILPVPLFTPFQFIGGRVNKQVWHVWRNWLSVILPMVGGFVAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPELGPEDEDSH
Ga0307471_1000679002	3300032180	Hardwood Forest Soil	LNKQWWTVWRDRLTFVLPAAGGLIAAAVGIRMLILTNFSDSGWEFMGRCGADALGFFLVAGICWLKRHPELGDED
Ga0307471_1009710011	3300032180	Hardwood Forest Soil	LNRQAWLIWKNRLTLILPVILGVVAAVVGVRMLILRNFSDSSWEFMGRCGADALGFFLVAGLGWLQKREELDRENLD
Ga0307471_1018747652	3300032180	Hardwood Forest Soil	VNKQWWPVWRSRLTFILPVVGGLIAAAVGIRMLILTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELGDED
Ga0307471_1038644742	3300032180	Hardwood Forest Soil	SWLSFLLPVTAGCVAAGVGLRMLILTGFSNSGWEFMGRCGADALGFFLVAGICWLKAHPELDSEEDRD
Ga0306920_1044627501	3300032261	Soil	VWRDRLTFVLPAIGGLIAAAVGIRMLLLTDFSNSGWEFMGRCGADALGFFLVAGICWLKTHPELGDED
Ga0335085_10000021421	3300032770	Soil	VNKQVWRVWRNWLSVILPMVGGFIAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPGLGPEDEDSH
Ga0335085_111349351	3300032770	Soil	VNKQGWLVWRDWLSFVLPMVGGFIAVAVGFRMLILTDFSDSGWEFMGRCGADALGFFLVAGICWLKTHPALSREDEE
Ga0335079_104633092	3300032783	Soil	VNKQVWRVWRNWLSVILPMVGGFIAAAVGFRMLILTDFSNSGWDFMGRCGADALGFFFVAGICWLKLHPELGPEDEDSH
Ga0335079_105670572	3300032783	Soil	VNKQVWRVWRNWLSVILPTLGGFVAAAVGIRMLILTDFSNSGWDFMGRCGADALGFFLVAGICWLKLHPELGAEDEDSR
Ga0335079_110607481	3300032783	Soil	VNKQVWRVWKNWLSVILPMVGGFIAAAVGFRMLILTGFSNSGWDFMGRCGADALGFFFVAGICWLKLHPEFGPEDEDSH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084500

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences